FvH4_5g08430

LRR receptor-like serine threonine-protein kinase

Basic Information

Type: gene
Biological Identity
fragaria_vesca
Fvb5
Physical Location & Seq
Forward (+)
4887813 .. 4890662
2850 bp
Loading structure...
UTR
Exon/CDS
Intron
FvH4_5g08430.t1

Sequence Viewer

Length: 2628 bp
ATGGGCAACTATATCCTCTTTCTGTTGTTGTGTCAGTATTTGCTGATTGCTAGTGAACATTGTTCGGGTGAGGAACTTCCAGGCGGTGCGAAATGCATTGACGAAGAGAGACGAGTGCTTCTCACCTTCAAACACCATCTTACTGATCCTTCCGGCAGGCTTTCTTCTTGGTCAAGCGGCGACGATTGCTGTCAATGGAATGGTCTTTCATGCGACAACCAGACTGGCCACATAGTAAAGATGGATCTCCGGAATCCATATCCATACAGAATTTATAATGACGAGTGGGATTTCAAGGACTACCAACAGTCTTGCTTGAGTGGTAAGATAAATCCTTCTTTGCTTAGCTTGAAGCATATATATTACTTAGACCTAAGCTGGAATGATTTTCATGGGATTCACATTCCCAACTTCTTGGGGAAGCTTACAAGCTTGAGGTATCTCAATCTCTCTTATGCTTCATTTCGAGGAGAGATTCCCCATTTTCTTGGTAACCTCTCAAACTTGAACTATCTTGACCTTGACAATAGCCGTCCCAGCAACAGCCTTGACGAAAACCTTTCTAAAAATTTGAATTGGCTTTCTCGTCTCTCTTCCCTGAAGTACCTCAATCTCGGACGAGCTAACCTTGGTGGTGCAGGAGTGAGTTGGTTACATTATATCAACATGCTTCCCTCACTGTTGGAGTTGCATTTATCTGCATGCGGCATTGATTCAAACCAGCTTCCACTCCTATTACCGACCGTTAACTTTACATCCCTTTCAGTCCTTGATATGTCTGAAAACTCTTTCAATTCTTCGATTCCAAGCTGGATTTCTAATCTGACAAGTCTAAGCACACTTGATCTACACGGCAATTATTTTGCTAGTCCCATTCCAAATGAATTTGCAAACTTAAAAAATCTCGAGCACCTTGATTTATCATTCAATTACCTTGATGGTCAAATTCCTGAAGTTTTGGGACAGCTTTCCCAGCTAGTCGTCTTAGACCTGTCTCAAAATTTTTGGGAAGGCACCTTAACAGAATCCCATTTCAAAAGTCTCACAAAATTAGACTCTTTTGCCGTTAGCACAGACAGGCCTATGCCTCTCATTTTCAACGTGACATATGACAAACTTCCTCCTTTCAAGCTCCATGATATTTCCATTGTGAATTGTCTAGTCGGTGATGCATTTGCCGTCTGGCTTCAATCACAAACTGAACTGTCGGATGTAATGCTTAGTGGTACTGGACTTTCTGAAATACCAGAGGAATGGTTGTTGAAGATATCATCCCAAGTCGAGTATTTACATTTCACCGACAATCAAATCCAAGGACCGCTTCCATTCCATTCCAAGTTTCCAAAATTGTTCAGATTAGATTTGAGTCGCAATCGATTTTCCAAGTCTATTCCCTTAGATTTTGGACAACTAATGCCAAATCTGAGACTGTTGTACTTGTCTGATAATTATTTAGTTGGTACCATTCCATCCTCAATTTATGAAATTCCGTTGTGGAGCATTTATCTAAGGAACAATCAGCTATCTGGAGAGTTCCCTCAAGCATGGAGTTTGTGGAGCGAAATCGATGTTGTGGATGTCTCAAGAAACAATCTCTCTGGTAATATTCCGAGTTCCATGGGTATCCCAAGTAGTCTTGCTATATTGAAGATGAACAACAATAACTTTGGTGGCAAAATTCCTTCCTTCAGAAATTGCTCTGAGTTGAGTAGACTTGCACTCGGAGGCAACAAGTTTTCTGGTAATCTACCTTCATGGATAGGATCAATGGTGACACTGCGTATGCTACAATTGCGAACAAACTCTTTCAGTGGTCACATTCCCCATCACCTGTGCAATCTTATTGGTCTCCATGTCCTGGACCTTGCTCAGAACAACTTTTCAGGTACCATTCCAAAGTGTTTGGATAATATCACTTCCATGGGTAGCGAGCCCAGTGGTTGGCCTGTGTACGATTATGCTGAGCAAACAACAATAATATCAAAAGGAAGAGAACTAGAATACGGTGTTTACAATGCAGGTTTGGTGAAAAGTATTGATCTTTCCTCAAATAACTTGGAAGGTGAAATTCCTGATGAAATAACCAGTCTCATTGCACTGGGTACCTTGAACTTGTCGAGGAATCATTTACATGGAAATATTCCGTCAAACATTGGAAACTTGAGTTCGCTAGAAACACTTGACCTCTCACACAATCACCTTTTTGGAGAAATTCCTCAAAGCTTGTCTTCTTTGAACTACTTGTCTCATTTGAACTTGTCTTGTAACAACTTTTCTGGAAGAATTCCTTCGGGCAATCAGCTCCGAACACTGGTCGATCCATCCATTTATGAGGGCAACCCATCATTGTGCGGCTTTCCTCTTTCAACCAAGTGCCCTGGAGATGACGAACCTACTAGCACTGGAAATCTTCCTGTCCAAAACAATGATGATGAAGATGGCAATGAAAAGCTCGGTCTCTACATTAGCGTCACGCTTGGCTTTATCATAGGCTTCTGGGGTGTTTGTGGCACATTAGTTGTGAAGAAATCGTTGAGGCATGCCTATTTTCAGTTCTTCAACAACATCAAAGAAAATATAATAGTGGCAATTGCAGTGAAAGTAGCTCGTCTCCGAGGGCACCATTGA

Protein Analysis

876

Amino Acids

97.68

Weight (kDa)

5.57

Isoelectric Point (pI)

37.75

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
LRRNT_2 PF08263 34 - 72 5.5e-13 Leucine rich repeat N-terminal domain
LRR_14 PF23598 112 - 200 3.2e-06 Leucine-rich repeat region
LRR_14 PF23598 214 - 479 6.4e-10 Leucine-rich repeat region
LRR_8 PF13855 296 - 334 9.6e-06 Leucine rich repeat
LRR_14 PF23598 688 - 756 3.4e-07 Leucine-rich repeat region
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready

Orthologous Genes (Group: OG0000048)

Species Orthologous Gene IDs
arabidopsis_thaliana AT2G34930
fragaria_vesca FvH4_3g12670 FvH4_3g12672 FvH4_3g12740 FvH4_3g12742 FvH4_3g12770 FvH4_3g12770 FvH4_3g12860 FvH4_3g12890 FvH4_3g13431 FvH4_3g13433 FvH4_3g13435 FvH4_3g13470 FvH4_3g13470 FvH4_3g13480 FvH4_3g13562 FvH4_3g13580 FvH4_3g13600 FvH4_3g13600 FvH4_3g13600 FvH4_3g13600 FvH4_3g13600 FvH4_3g13600 FvH4_3g13610 FvH4_3g13620 FvH4_3g13620 FvH4_3g23240 FvH4_3g32910 FvH4_3g35070 FvH4_3g45520 FvH4_5g08430 FvH4_5g08450 FvH4_6g53230 FvH4_6g53300
malus_domestica MD05G1217600.v1.1 MD05G1217700.v1.1 MD05G1224700.v1.1 MD05G1225100.v1.1 MD05G1225300.v1.1 MD05G1225400.v1.1 MD05G1235900.v1.1 MD05G1236100.v1.1 MD05G1236300.v1.1 MD05G1237200.v1.1 MD05G1241600.v1.1 MD05G1245700.v1.1 MD05G1245800.v1.1 MD05G1245900.v1.1 MD05G1246000.v1.1 MD05G1246100.v1.1 MD05G1246300.v1.1 MD05G1246400.v1.1 MD05G1246500.v1.1 MD05G1248100.v1.1 MD05G1248200.v1.1 MD05G1264300.v1.1 MD05G1275900.v1.1 MD07G1051400.v1.1 MD09G1012600.v1.1 MD09G1012700.v1.1 MD09G1012800.v1.1 MD10G1221400.v1.1 MD10G1221500.v1.1 MD10G1221600.v1.1 MD10G1221900.v1.1 MD10G1222200.v1.1 MD10G1222400.v1.1 MD10G1222500.v1.1 MD10G1222900.v1.1 MD10G1223000.v1.1 MD10G1223100.v1.1 MD10G1223500.v1.1 MD10G1228000.v1.1 MD12G1019600.v1.1 MD12G1020000.v1.1 MD12G1020100.v1.1 MD17G1013200.v1.1 MD17G1013300.v1.1 MD17G1013400.v1.1
prunus_persica Prupe.1G060500_v2.0.a1 Prupe.1G100100_v2.0.a1 Prupe.3G124000_v2.0.a1 Prupe.3G304400_v2.0.a1 Prupe.4G116800_v2.0.a1 Prupe.4G116900_v2.0.a1 Prupe.4G117000_v2.0.a1 Prupe.4G121800_v2.0.a1 Prupe.4G121900_v2.0.a1 Prupe.4G122000_v2.0.a1 Prupe.4G122100_v2.0.a1 Prupe.4G122200_v2.0.a1 Prupe.4G122300_v2.0.a1 Prupe.4G122500_v2.0.a1 Prupe.4G122600_v2.0.a1 Prupe.4G122800_v2.0.a1 Prupe.4G122900_v2.0.a1 Prupe.4G123000_v2.0.a1 Prupe.4G123100_v2.0.a1 Prupe.4G123200_v2.0.a1 Prupe.4G131500_v2.0.a1 Prupe.4G131600_v2.0.a1 Prupe.7G032500_v2.0.a1 Prupe.7G032900_v2.0.a1 Prupe.7G033000_v2.0.a1 Prupe.7G033100_v2.0.a1 Prupe.7G033300_v2.0.a1 Prupe.7G033600_v2.0.a1 Prupe.7G034600_v2.0.a1 Prupe.7G040200_v2.0.a1 Prupe.7G059200_v2.0.a1
pyrus_communis pycom05g20580 pycom05g20590 pycom05g20760 pycom05g20800 pycom05g21280 pycom05g21290 pycom05g21820 pycom05g21830 pycom05g22180 pycom05g22190 pycom05g22210 pycom05g22450 pycom05g22460 pycom05g22470 pycom05g22480 pycom05g22490 pycom05g23770 pycom05g23780 pycom05g24050 pycom05g24060 pycom07g03910 pycom10g18700 pycom10g18720 pycom10g18730 pycom10g18740 pycom10g19150 pycom111g01060 pycom12g01660 pycom12g01690 pycom12g01720 pycom12g01740 pycom12g01750 pycom12g01770 pycom12g01810 pycom12g01820 pycom12g01830 pycom12g01840 pycom12g01870 pycom12g01900 pycom17g01060 pycom17g01070
rosa_chinensis RchiOBHm_Chr1g0315041 RchiOBHm_Chr1g0315051 RchiOBHm_Chr1g0315071 RchiOBHm_Chr1g0315161 RchiOBHm_Chr1g0315211 RchiOBHm_Chr1g0315251 RchiOBHm_Chr1g0315321 RchiOBHm_Chr1g0315391 RchiOBHm_Chr1g0315451 RchiOBHm_Chr1g0315481 RchiOBHm_Chr1g0315551 RchiOBHm_Chr1g0315601 RchiOBHm_Chr1g0315621 RchiOBHm_Chr1g0359221 RchiOBHm_Chr2g0142981 RchiOBHm_Chr2g0143001 RchiOBHm_Chr2g0143061 RchiOBHm_Chr2g0143091 RchiOBHm_Chr2g0175321 RchiOBHm_Chr2g0175341 RchiOBHm_Chr2g0175361 RchiOBHm_Chr2g0175371 RchiOBHm_Chr3g0470491 RchiOBHm_Chr3g0480881 RchiOBHm_Chr3g0485511 RchiOBHm_Chr5g0020741 RchiOBHm_Chr5g0020901 RchiOBHm_Chr5g0020931 RchiOBHm_Chr5g0020941 RchiOBHm_Chr5g0020961 RchiOBHm_Chr5g0020971 RchiOBHm_Chr5g0021451 RchiOBHm_Chr5g0021531 RchiOBHm_Chr5g0021831 RchiOBHm_Chr5g0021841 RchiOBHm_Chr5g0021931 RchiOBHm_Chr5g0021941 RchiOBHm_Chr5g0021981 RchiOBHm_Chr5g0021991 RchiOBHm_Chr5g0022011 RchiOBHm_Chr5g0022181 RchiOBHm_Chr5g0022191 RchiOBHm_Chr5g0022211 RchiOBHm_Chr5g0022221 RchiOBHm_Chr5g0022231 RchiOBHm_Chr5g0022291 RchiOBHm_Chr5g0022301 RchiOBHm_Chr5g0022331 RchiOBHm_Chr5g0022361 RchiOBHm_Chr5g0022371 RchiOBHm_Chr5g0022381 RchiOBHm_Chr5g0022401 RchiOBHm_Chr5g0022431 RchiOBHm_Chr5g0022451 RchiOBHm_Chr5g0022541 RchiOBHm_Chr5g0022591 RchiOBHm_Chr5g0022601 RchiOBHm_Chr5g0022701 RchiOBHm_Chr5g0022741 RchiOBHm_Chr5g0022791 RchiOBHm_Chr5g0022811 RchiOBHm_Chr5g0022851 RchiOBHm_Chr5g0029441 RchiOBHm_Chr5g0041631 RchiOBHm_Chr5g0069391 RchiOBHm_Chr6g0273811 RchiOBHm_Chr6g0273831 RchiOBHm_Chr6g0275331 RchiOBHm_Chr7g0219061
rosa_laevigata RLG00000002463 RLG00000020007 RLG00000020008 RLG00000022320 RLG00000022321 RLG00000023446 RLG00000030742 RLG00000030743 RLG00000030747 RLG00000032557 RLG00000032564 RLG00000032571 RLG00000032573 RLG00000032574 RLG00000032612 RLG00000032633 RLG00000032636 RLG00000032638 RLG00000032650 RLG00000032651 RLG00000032652 RLG00000032653 RLG00000032655 RLG00000032673 RLG00000032678 RLG00000032769 RLG00000032857 RLG00000033168 RLG00000033465 RLG00000034086 RLG00000034222 RLG00000035290
rosa_multiflora Rmu_co8143358.1_g000001 Rmu_co8518791.1_g000001 Rmu_sc0000178.1_g000008 Rmu_sc0000178.1_g000014 Rmu_sc0000401.1_g000005 Rmu_sc0000401.1_g000013 Rmu_sc0000401.1_g000017 Rmu_sc0000401.1_g000018 Rmu_sc0000401.1_g000024 Rmu_sc0000401.1_g000025 Rmu_sc0000576.1_g000020 Rmu_sc0001585.1_g000003 Rmu_sc0001585.1_g000005 Rmu_sc0001585.1_g000008 Rmu_sc0001784.1_g000006 Rmu_sc0001784.1_g000011 Rmu_sc0001784.1_g000022 Rmu_sc0001784.1_g000028 Rmu_sc0002052.1_g000004 Rmu_sc0002052.1_g000011 Rmu_sc0002277.1_g000003 Rmu_sc0002277.1_g000006 Rmu_sc0002277.1_g000024 Rmu_sc0002658.1_g000012 Rmu_sc0003512.1_g000004 Rmu_sc0003512.1_g000007 Rmu_sc0004180.1_g000016 Rmu_sc0004180.1_g000029 Rmu_sc0004180.1_g000034 Rmu_sc0005639.1_g000008 Rmu_sc0005639.1_g000023 Rmu_sc0006070.1_g000016 Rmu_sc0006070.1_g000017 Rmu_sc0006966.1_g000021 Rmu_sc0006966.1_g000023 Rmu_sc0007239.1_g000003 Rmu_sc0008460.1_g000010 Rmu_sc0009984.1_g000008 Rmu_sc0010181.1_g000005 Rmu_sc0010181.1_g000010 Rmu_sc0010503.1_g000006 Rmu_sc0011646.1_g000003 Rmu_sc0012984.1_g000011 Rmu_sc0016972.1_g000005 Rmu_sc0016972.1_g000008 Rmu_sc0023070.1_g000003 Rmu_sc0025660.1_g000001 Rmu_ssc0000322.1_g000019
rosa_roxburghii Rroxscaffold_1G00038860 Rroxscaffold_1G00053490 Rroxscaffold_1G00053500 Rroxscaffold_1G00054230 Rroxscaffold_1G00056460 Rroxscaffold_1G00056470 Rroxscaffold_1G00056480 Rroxscaffold_1G00056500 Rroxscaffold_1G00056510 Rroxscaffold_1G00056620 Rroxscaffold_1G00056690 Rroxscaffold_1G00056710 Rroxscaffold_1G00056720 Rroxscaffold_1G00056730 Rroxscaffold_1G00056740 Rroxscaffold_1G00056750 Rroxscaffold_1G00056760 Rroxscaffold_1G00056870 Rroxscaffold_1G00056900 Rroxscaffold_1G00057120 Rroxscaffold_1G00057560 Rroxscaffold_2G00077430 Rroxscaffold_2G00102160 Rroxscaffold_3G00231420 Rroxscaffold_3G00231430 Rroxscaffold_4G00297230 Rroxscaffold_4G00331570 Rroxscaffold_6G00396700 Rroxscaffold_6G00400940 Rroxscaffold_7G00192740
rosa_rugosa Rorug01G0004400 Rorug01G0004500 Rorug02G0377600 Rorug02G0378000 Rorug02G0582800 Rorug02G0583400 Rorug03G0187000 Rorug03G0218800 Rorug04G0081200 Rorug05G0062700 Rorug05G0062700 Rorug05G0063100 Rorug05G0063200 Rorug05G0063200 Rorug05G0063200 Rorug05G0067000 Rorug05G0069700 Rorug05G0069900 Rorug05G0070000 Rorug05G0070100 Rorug05G0070300 Rorug05G0070400 Rorug05G0070600 Rorug05G0070600 Rorug05G0072300 Rorug05G0072400 Rorug05G0072500 Rorug05G0072500 Rorug05G0072600.1 Rorug05G0072700 Rorug05G0072800 Rorug05G0072800 Rorug05G0072900 Rorug05G0073000 Rorug05G0073000 Rorug05G0073400 Rorug05G0073400 Rorug05G0073400 Rorug05G0074800 Rorug05G0075000 Rorug05G0114300 Rorug05G0194200 Rorug06G0097800
rosa_samantha Rh2AG401400 Rh2CG387600 Rh2CG417000 Rh2CG637400 Rh5CG169600 Rh5CG172100 Rh5CG175200 Rh5CG317100 Rh6DG187900
rosa_wichuraiana Rw1G000750 Rw1G000790 Rw1G000820 Rw1G000860 Rw1G000880 Rw1G000910 Rw2G035180 Rw2G035200 Rw2G035240 Rw2G054370 Rw2G054380 Rw5G013570 Rw5G013580 Rw5G013590 Rw5G013910 Rw5G013980 Rw5G014110 Rw5G014120 Rw5G014280 Rw5G014310 Rw5G014400 Rw5G014420 Rw5G014440 Rw5G014460 Rw5G014480 Rw5G014500 Rw5G014520 Rw5G014530 Rw5G042390

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 1 cut(s) 276
Acc36I ACCTGC 1 cut(s) 2009
Acc65I GGTACC 3 cut(s) 1460, 1886, 2102
AccB1I GGYRCC 5 cut(s) 1013, 1460, 1886, 2102, 2619
AccB7I CCANNNNNTGG 2 cut(s) 1858, 1941
AccI GTMKAC 1 cut(s) 1711
AccIII TCCGGA 1 cut(s) 249
AciI CCGC 5 cut(s) 84, 177, 705, 1319, 2352
AclWI GGATC 4 cut(s) 140, 252, 1771, 2312
AcoI YGGCCR 1 cut(s) 226
AcuI CTGAAG 3 cut(s) 620, 972, 1672
AfaI GTAC 7 cut(s) 605, 1228, 1436, 1462, 1888, 1952, 2104
AfiI CCNNNNNNNGG 3 cut(s) 1858, 1941, 2311
AjnI CCWGG 3 cut(s) 79, 1857, 2377
AjuI GAANNNNNNNTTGG 4 cut(s) 799, 831, 1305, 1337
Alw21I GWGCWC 1 cut(s) 912
AlwI GGATC 4 cut(s) 140, 252, 1771, 2312
Ama87I CYCGRG 1 cut(s) 905
Aor13HI TCCGGA 1 cut(s) 249
AoxI GGCC 3 cut(s) 226, 1079, 1943
Asp700I GAANNNNTTC 1 cut(s) 2287
Asp718I GGTACC 3 cut(s) 1460, 1886, 2102
AspS9I GGNCC 2 cut(s) 1316, 1861
AsuHPI GGTGA 9 cut(s) 80, 115, 1178, 1288, 1783, 1820, 2038, 2075, 2189
AvaI CYCGRG 1 cut(s) 905
AvaII GGWCC 2 cut(s) 1316, 1861
BaeGI GKGCMC 2 cut(s) 2378, 2622
BalI TGGCCA 1 cut(s) 228
BanI GGYRCC 5 cut(s) 1013, 1460, 1886, 2102, 2619
BanII GRGCYC 1 cut(s) 1935
BarI GAAGNNNNNNTAC 2 cut(s) 1735, 1767
BbsI GAAGAC 1 cut(s) 2220
Bbv12I GWGCWC 1 cut(s) 912
BccI CCATC 8 cut(s) 144, 235, 932, 1477, 1833, 2329, 2350, 2432
BceAI ACGGC 4 cut(s) 516, 868, 1049, 1163
BciT130I CCWGG 3 cut(s) 81, 1859, 2379
BciVI GTATCC 1 cut(s) 1634
BfaI CTAG 7 cut(s) 51, 867, 977, 1160, 1997, 2171, 2397
BfuAI ACCTGC 1 cut(s) 2009
BfuI GTATCC 1 cut(s) 1634
BisI GCNGC 3 cut(s) 178, 706, 2353
BlpI GCTNAGC 2 cut(s) 344, 1962
BlsI GCNGC 3 cut(s) 179, 707, 2354
Bme1390I CCNGG 3 cut(s) 81, 1859, 2379
Bme18I GGWCC 2 cut(s) 1316, 1861
BmeT110I CYCGRG 1 cut(s) 905
BmgT120I GGNCC 2 cut(s) 1316, 1861
BmiI GGNNCC 5 cut(s) 1015, 1462, 1888, 2104, 2621
BmrFI CCNGG 3 cut(s) 81, 1859, 2379
BmrI ACTGGG 2 cut(s) 1929, 2108
BmsI GCATC 1 cut(s) 1159
BmuI ACTGGG 2 cut(s) 1929, 2108
BpiI GAAGAC 1 cut(s) 2220
BplI GAGNNNNNCTC 2 cut(s) 105, 137
BpmI CTGGAG 2 cut(s) 1548, 2400
Bpu10I CCTNAGC 1 cut(s) 374
Bpu1102I GCTNAGC 2 cut(s) 344, 1962
BpuEI CTTGAG 5 cut(s) 337, 454, 1524, 1567, 2182
Bsa29I ATCGAT 2 cut(s) 1375, 1566
BsaI GGTCTC 2 cut(s) 1853, 2462
BsaJI CCNNGG 6 cut(s) 628, 1312, 1617, 1920, 2377, 2614
BsaWI WCCGGW 1 cut(s) 249
Bsc4I CCNNNNNNNGG 3 cut(s) 1858, 1941, 2311
Bse1I ACTGG 7 cut(s) 229, 1234, 1935, 2085, 2103, 2316, 2407
Bse3DI GCAATG 2 cut(s) 2091, 2449
BseAI TCCGGA 1 cut(s) 249
BseBI CCWGG 3 cut(s) 81, 1859, 2379
BseCI ATCGAT 2 cut(s) 1375, 1566
BseDI CCNNGG 6 cut(s) 628, 1312, 1617, 1920, 2377, 2614
BseGI GGATG 6 cut(s) 755, 1216, 1271, 1469, 1582, 2321
BseLI CCNNNNNNNGG 3 cut(s) 1858, 1941, 2311
BseMI GCAATG 2 cut(s) 2091, 2449
BseMII CTCAG 4 cut(s) 1415, 1692, 1883, 1953
BseNI ACTGG 7 cut(s) 229, 1234, 1935, 2085, 2103, 2316, 2407
BseRI GAGGAG 1 cut(s) 483
BseSI GKGCMC 2 cut(s) 2378, 2622
BseYI CCCAGC 2 cut(s) 536, 972
BsgI GTGCAG 1 cut(s) 657
Bsh1285I CGRYCG 1 cut(s) 744
BshFI GGCC 3 cut(s) 228, 1081, 1945
BshNI GGYRCC 5 cut(s) 1013, 1460, 1886, 2102, 2619
BshVI ATCGAT 2 cut(s) 1375, 1566
BsiEI CGRYCG 1 cut(s) 744
BsiHKAI GWGCWC 1 cut(s) 912
BsiHKCI CYCGRG 1 cut(s) 905
BsiSI CCGG 2 cut(s) 153, 250
BslFI GGGAC 3 cut(s) 519, 855, 975
BslI CCNNNNNNNGG 3 cut(s) 1858, 1941, 2311
BsmBI CGTCTC 3 cut(s) 103, 593, 2615
BsmFI GGGAC 3 cut(s) 519, 855, 975
BsnI GGCC 3 cut(s) 228, 1081, 1945
Bso31I GGTCTC 2 cut(s) 1853, 2462
BsoBI CYCGRG 1 cut(s) 905
Bsp1286I GDGCHC 4 cut(s) 912, 1935, 2378, 2622
Bsp13I TCCGGA 1 cut(s) 249
Bsp143I GATC 6 cut(s) 145, 244, 844, 1763, 2038, 2317
Bsp1720I GCTNAGC 2 cut(s) 344, 1962
Bsp19I CCATGG 2 cut(s) 1617, 1920
BspACI CCGC 5 cut(s) 84, 177, 705, 1319, 2352
BspANI GGCC 3 cut(s) 228, 1081, 1945
BspCNI CTCAG 4 cut(s) 1416, 1693, 1882, 1954
BspDI ATCGAT 2 cut(s) 1375, 1566
BspEI TCCGGA 1 cut(s) 249
BspLI GGNNCC 5 cut(s) 1015, 1462, 1888, 2104, 2621
BspMI ACCTGC 1 cut(s) 2009
BspPI GGATC 4 cut(s) 140, 252, 1771, 2312
BspT107I GGYRCC 5 cut(s) 1013, 1460, 1886, 2102, 2619
BspTNI GGTCTC 2 cut(s) 1853, 2462
BsrDI GCAATG 2 cut(s) 2091, 2449
BsrI ACTGG 7 cut(s) 229, 1234, 1935, 2085, 2103, 2316, 2407
BssECI CCNNGG 6 cut(s) 628, 1312, 1617, 1920, 2377, 2614
BssMI GATC 6 cut(s) 145, 244, 844, 1763, 2038, 2317
BssT1I CCWWGG 4 cut(s) 628, 1312, 1617, 1920
Bst2UI CCWGG 3 cut(s) 81, 1859, 2379
Bst4CI ACNGT 6 cut(s) 309, 681, 745, 1206, 1431, 2006
Bst6I CTCTTC 3 cut(s) 99, 598, 1984
BstC8I GCNNGC 4 cut(s) 158, 703, 1931, 2541
BstDSI CCRYGG 2 cut(s) 1617, 1920
BstEII GGTNACC 1 cut(s) 491
BstF5I GGATG 6 cut(s) 755, 1216, 1271, 1469, 1582, 2321
BstKTI GATC 6 cut(s) 148, 247, 847, 1766, 2041, 2320
BstMBI GATC 6 cut(s) 145, 244, 844, 1763, 2038, 2317
BstMCI CGRYCG 1 cut(s) 744
BstMWI GCNNNNNNNGC 4 cut(s) 186, 537, 973, 1792
BstNI CCWGG 3 cut(s) 81, 1859, 2379
BstNSI RCATGY 3 cut(s) 670, 705, 2543
BstPI GGTNACC 1 cut(s) 491
BstSCI CCNGG 3 cut(s) 79, 1857, 2377
BstSLI GKGCMC 2 cut(s) 2378, 2622
BstV2I GAAGAC 1 cut(s) 2220
BstX2I RGATCY 1 cut(s) 244
BstXI CCANNNNNNTGG 3 cut(s) 415, 488, 1254
BstYI RGATCY 1 cut(s) 244
Bsu15I ATCGAT 2 cut(s) 1375, 1566
BsuI GTATCC 1 cut(s) 1634
BsuRI GGCC 3 cut(s) 228, 1081, 1945
BsuTUI ATCGAT 2 cut(s) 1375, 1566
BtgI CCRYGG 2 cut(s) 1617, 1920
BtsCI GGATG 6 cut(s) 755, 1216, 1271, 1469, 1582, 2321
BtsI GCAGTG 2 cut(s) 1775, 2601
BtsIMutI CAGTG 8 cut(s) 677, 1775, 1816, 1942, 2096, 2309, 2400, 2601
BveI ACCTGC 1 cut(s) 2009
Cac8I GCNNGC 4 cut(s) 158, 703, 1931, 2541
Cfr13I GGNCC 2 cut(s) 1316, 1861
ClaI ATCGAT 2 cut(s) 1375, 1566
CseI GACGC 1 cut(s) 2458
Csp6I GTAC 7 cut(s) 604, 1227, 1435, 1461, 1887, 1951, 2103
CviQI GTAC 7 cut(s) 604, 1227, 1435, 1461, 1887, 1951, 2103
DpnI GATC 6 cut(s) 147, 246, 846, 1765, 2040, 2319
DpnII GATC 6 cut(s) 145, 244, 844, 1763, 2038, 2317
EaeI YGGCCR 1 cut(s) 226
Eam1104I CTCTTC 3 cut(s) 99, 598, 1984
EarI CTCTTC 3 cut(s) 99, 598, 1984
Eco130I CCWWGG 4 cut(s) 628, 1312, 1617, 1920
Eco147I AGGCCT 1 cut(s) 1081
Eco24I GRGCYC 1 cut(s) 1935
Eco31I GGTCTC 2 cut(s) 1853, 2462
Eco32I GATATC 1 cut(s) 1269
Eco47I GGWCC 2 cut(s) 1316, 1861
Eco57I CTGAAG 3 cut(s) 620, 972, 1672
Eco88I CYCGRG 1 cut(s) 905
Eco91I GGTNACC 1 cut(s) 491
EcoO65I GGTNACC 1 cut(s) 491
EcoRI GAATTC 1 cut(s) 2283
EcoRII CCWGG 3 cut(s) 79, 1857, 2377
EcoRV GATATC 1 cut(s) 1269
EcoT14I CCWWGG 4 cut(s) 628, 1312, 1617, 1920
EcoT22I ATGCAT 2 cut(s) 98, 1174
EcoT38I GRGCYC 1 cut(s) 1935
ErhI CCWWGG 4 cut(s) 628, 1312, 1617, 1920
Esp3I CGTCTC 3 cut(s) 103, 593, 2615
FalI AAGNNNNNCTT 6 cut(s) 1305, 1337, 2212, 2244, 2272, 2304
FaqI GGGAC 3 cut(s) 519, 855, 975
FauNDI CATATG 1 cut(s) 1108
FblI GTMKAC 1 cut(s) 1711
Fnu4HI GCNGC 3 cut(s) 178, 706, 2353
FokI GGATG 6 cut(s) 742, 1223, 1258, 1456, 1589, 2308
FriOI GRGCYC 1 cut(s) 1935
Fsp4HI GCNGC 3 cut(s) 178, 706, 2353
FspBI CTAG 7 cut(s) 51, 867, 977, 1160, 1997, 2171, 2397
GluI GCNGC 3 cut(s) 178, 706, 2353
GsaI CCCAGC 2 cut(s) 540, 976
GsuI CTGGAG 2 cut(s) 1548, 2400
HaeIII GGCC 3 cut(s) 228, 1081, 1945
HapII CCGG 2 cut(s) 153, 250
HgaI GACGC 1 cut(s) 2458
HincII GTYRAC 1 cut(s) 748
HindII GTYRAC 1 cut(s) 748
HindIII AAGCTT 3 cut(s) 422, 430, 2221
HinfI GANTC 9 cut(s) 253, 397, 475, 713, 802, 1025, 1055, 1366, 2122
HpaI GTTAAC 1 cut(s) 748
HpaII CCGG 2 cut(s) 153, 250
HphI GGTGA 9 cut(s) 80, 115, 1178, 1288, 1783, 1820, 2038, 2075, 2189
Hpy166II GTNNAC 5 cut(s) 56, 748, 1712, 1951, 2011
Hpy188III TCNNGA 8 cut(s) 250, 515, 905, 950, 1527, 1584, 2072, 2277
Hpy8I GTNNAC 5 cut(s) 56, 748, 1712, 1951, 2011
Hpy99I CGWCG 1 cut(s) 185
HpyAV CCTTC 9 cut(s) 136, 159, 345, 1004, 1692, 1696, 1761, 2054, 2298
HpyCH4III ACNGT 6 cut(s) 309, 681, 745, 1206, 1431, 2006
HpyCH4IV ACGT 1 cut(s) 1101
HpyF10VI GCNNNNNNNGC 4 cut(s) 186, 537, 973, 1792
HpySE526I ACGT 1 cut(s) 1101
Kpn2I TCCGGA 1 cut(s) 249
KpnI GGTACC 3 cut(s) 1464, 1890, 2106
KspAI GTTAAC 1 cut(s) 748
Kzo9I GATC 6 cut(s) 145, 244, 844, 1763, 2038, 2317
LmnI GCTCC 4 cut(s) 1137, 1497, 1557, 2307
LweI GCATC 1 cut(s) 1159
MaeI CTAG 7 cut(s) 51, 867, 977, 1160, 1997, 2171, 2397
MaeII ACGT 1 cut(s) 1101
MaeIII GTNAC 7 cut(s) 491, 651, 1102, 1771, 1814, 2264, 2470
MalI GATC 6 cut(s) 147, 246, 846, 1765, 2040, 2319
MboI GATC 6 cut(s) 145, 244, 844, 1763, 2038, 2317
MfeI CAATTG 2 cut(s) 1790, 2589
MflI RGATCY 1 cut(s) 244
MhlI GDGCHC 4 cut(s) 912, 1935, 2378, 2622
MlsI TGGCCA 1 cut(s) 228
MluNI TGGCCA 1 cut(s) 228
MlyI GAGTC 2 cut(s) 1049, 1375
MmeI TCCRAC 2 cut(s) 663, 1188
Mox20I TGGCCA 1 cut(s) 228
Mph1103I ATGCAT 2 cut(s) 98, 1174
MroI TCCGGA 1 cut(s) 249
MroXI GAANNNNTTC 1 cut(s) 2287
MscI TGGCCA 1 cut(s) 228
MseI TTAA 3 cut(s) 747, 896, 1019
MslI CAYNNNNRTG 3 cut(s) 1919, 2130, 2347
Msp20I TGGCCA 1 cut(s) 228
MspI CCGG 2 cut(s) 153, 250
MspR9I CCNGG 3 cut(s) 81, 1859, 2379
MunI CAATTG 2 cut(s) 1790, 2589
MvaI CCWGG 3 cut(s) 81, 1859, 2379
MwoI GCNNNNNNNGC 4 cut(s) 186, 537, 973, 1792
NcoI CCATGG 2 cut(s) 1617, 1920
NdeI CATATG 1 cut(s) 1108
NdeII GATC 6 cut(s) 145, 244, 844, 1763, 2038, 2317
NlaIV GGNNCC 5 cut(s) 1015, 1462, 1888, 2104, 2621
NmuCI GTSAC 4 cut(s) 1102, 1771, 1814, 2470
NsiI ATGCAT 2 cut(s) 98, 1174
NspI RCATGY 3 cut(s) 670, 705, 2543
PaeI GCATGC 2 cut(s) 705, 2543
PaeR7I CTCGAG 1 cut(s) 905
PceI AGGCCT 1 cut(s) 1081
PdmI GAANNNNTTC 1 cut(s) 2287
PfeI GAWTC 7 cut(s) 253, 397, 475, 713, 802, 1025, 2122
PflMI CCANNNNNTGG 2 cut(s) 1858, 1941
PfoI TCCNGGA 1 cut(s) 1857
PkrI GCNGC 3 cut(s) 179, 707, 2354
PleI GAGTC 2 cut(s) 1049, 1374
PpsI GAGTC 2 cut(s) 1049, 1374
PsiI TTATAA 1 cut(s) 276
Psp6I CCWGG 3 cut(s) 79, 1857, 2377
PspEI GGTNACC 1 cut(s) 491
PspFI CCCAGC 2 cut(s) 536, 972
PspGI CCWGG 3 cut(s) 79, 1857, 2377
PspN4I GGNNCC 5 cut(s) 1015, 1462, 1888, 2104, 2621
PspPI GGNCC 2 cut(s) 1316, 1861
PsuI RGATCY 1 cut(s) 244
RsaI GTAC 7 cut(s) 605, 1228, 1436, 1462, 1888, 1952, 2104
RsaNI GTAC 7 cut(s) 604, 1227, 1435, 1461, 1887, 1951, 2103
RseI CAYNNNNRTG 3 cut(s) 1919, 2130, 2347
SaqAI TTAA 3 cut(s) 747, 896, 1019
SatI GCNGC 3 cut(s) 178, 706, 2353
Sau3AI GATC 6 cut(s) 145, 244, 844, 1763, 2038, 2317
Sau96I GGNCC 2 cut(s) 1316, 1861
SchI GAGTC 2 cut(s) 1049, 1375
ScrFI CCNGG 3 cut(s) 81, 1859, 2379
SduI GDGCHC 4 cut(s) 912, 1935, 2378, 2622
SfaNI GCATC 1 cut(s) 1159
Sfr274I CTCGAG 1 cut(s) 905
SinI GGWCC 2 cut(s) 1316, 1861
SlaI CTCGAG 1 cut(s) 905
SmiMI CAYNNNNRTG 3 cut(s) 1919, 2130, 2347
SmlI CTYRAG 6 cut(s) 316, 433, 905, 1539, 1582, 2161
SmoI CTYRAG 6 cut(s) 316, 433, 905, 1539, 1582, 2161
SphI GCATGC 2 cut(s) 705, 2543
SseBI AGGCCT 1 cut(s) 1081
SsiI CCGC 5 cut(s) 84, 177, 705, 1319, 2352
SspI AATATT 2 cut(s) 1606, 2140
SspMI CTAG 7 cut(s) 51, 867, 977, 1160, 1997, 2171, 2397
StuI AGGCCT 1 cut(s) 1081
StyD4I CCNGG 3 cut(s) 79, 1857, 2377
StyI CCWWGG 4 cut(s) 628, 1312, 1617, 1920
TaaI ACNGT 6 cut(s) 309, 681, 745, 1206, 1431, 2006
TaiI ACGT 1 cut(s) 1104
TaqI TCGA 8 cut(s) 466, 800, 906, 1281, 1375, 1566, 2117, 2316
TaqII GACCGA 1 cut(s) 2444
TatI WGTACW 1 cut(s) 1434
TauI GCSGC 3 cut(s) 180, 708, 2355
TfiI GAWTC 7 cut(s) 253, 397, 475, 713, 802, 1025, 2122
Tru1I TTAA 3 cut(s) 747, 896, 1019
Tru9I TTAA 3 cut(s) 747, 896, 1019
TscAI CASTG 8 cut(s) 684, 1782, 1816, 1942, 2103, 2316, 2407, 2601
TseFI GTSAC 4 cut(s) 1102, 1771, 1814, 2470
Tsp45I GTSAC 4 cut(s) 1102, 1771, 1814, 2470
TspGWI ACGGA 2 cut(s) 1479, 2133
TspRI CASTG 8 cut(s) 684, 1782, 1816, 1942, 2103, 2316, 2407, 2601
Van91I CCANNNNNTGG 2 cut(s) 1858, 1941
VpaK11BI GGWCC 2 cut(s) 1316, 1861
XceI RCATGY 3 cut(s) 670, 705, 2543
XhoI CTCGAG 1 cut(s) 905
XmiI GTMKAC 1 cut(s) 1711
XmnI GAANNNNTTC 1 cut(s) 2287
XspI CTAG 7 cut(s) 51, 867, 977, 1160, 1997, 2171, 2397
Zsp2I ATGCAT 2 cut(s) 98, 1174
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.