MD10G1222500.v1.1

LRR receptor-like serine threonine-protein kinase

Basic Information

Type: gene
Biological Identity
malus_domestica
Chr10
Physical Location & Seq
Reverse (-)
32087821 .. 32090967
3147 bp
Loading structure...
UTR
Exon/CDS
Intron
MD10G1222500.v1.1.491

Sequence Viewer

Length: 3147 bp
ATGGATAGCTGCTATCCAAATTTCAATGTTGTTTACTATTTTCTCTTTCTGTTTACGGTCACTTCCTACATGCGGATGGGTGACGGACTTCCAAGCGGTGGGGACTCATGCATTGAAGAAGAGAGAGGAGCACTGCTCAGCTTCAAACTAAATGTTACTGATCCTTCGGGAAGGCTTTCTTCTTGGGTAGGACGCGACTGCTGTCAATGGAAAGGAATTTTGTGCAACAACCGCACGGGTCATGTTGCAAAGGTGGACCTTCGGAATACTTATCCATCTCCAGTATGGTCTGATCCCGATCACTACGACAAGTTGGCTTATGAACGCTCTTTATTGTCGGGTAAGATAAATCCTTCTTTGCTTAGCTTGAAGCATTTAAATTACCTAGATTTGAGCTGGAACAGTTTCGAACTCCCTAAGTTCAATGGTCTGCTTGACAATTTGAGGTATCTCAACCTCTCCTTTGCTTTATCATCGGGAGCTGAGATTCCAGAGTTTATTGGAAACTTGTCGTCTTTGGAAACACTCGATCTTTCGTATAATTATTTCGAAGAGAATCCAATTCCTAAGTCTTTTGGCCAGCTTAAGAGTTTGAAATATCTTGATATCTTCTTCTCACGTTTTGGGGGAGAAATTCCCCCTAACCTTGGAAACCTGTCAAACCTGAACCATCTTGACCTCGGGTGGAATTACTTGGAAATATCTTCCGAAGGCTTGAATTGGCTTCCTCGCCTCTCTTCCTTAACATACCTCAATCTCGACTTTGTCAATCTTCGCAGCACGGGAGCAAGTTGGCTATATGCAGTTAACATGCTTCCTTCGCTGTTAGAGTTGCATTTGTCTGGTTGTAAAATTGAAAGAATTCCACTCTCAATCCAAAAGGTAAATATAACTTCACTTTTGGTACTTGATATCAGAATGAATTCTATCATTTCTCCACTACCTAGCTGGTTTTCTAATCTTACTAGTCTTCGAAAACTCAATCTGAGTGAAAATGAAAATGATTATGGAAACTATTTCACTGGTCCGATTCCTCGTGAGTTTGCAAGGCTCGAATATCTGGAAGGCCTTGATTTTTCTGGTAATGGACTCGAAGGTCATATTCCCAAACTAAACTTTTGCAAGCTAAAGACCTTAAACTTTCAAGGAAACAAATTTGGTGGGGGAATTCAAGGGCTTTTGAGTGGTTTCTCAAACTGTACAGATGGTGTATTGGAATCACTGGATTTGTCCTCTAATAAGCTGGAAGATGAGTTGCCTGACTCCCTTGGGATGCTACACAACTTGCAATATGTCAACCTTGAGTTCAACAATTTTTCGGGTAAAATCCCGGAATCTATTGGAAAGTTGTCATCCTTGAAAACTCTAAACCTCAGTTACAACAATATGATTGGACCGATTCCGGATACTTTGGGACAATTGTCTGAGCTAGTTCACCTAGATTTGTACGGGAATTCATGGGAAGGCACTTTAACAGAATCTCATTTCGCAAATCTCACAAGATTACAATCTATTGATGTGTCTACATATCGACCTATGTCCCTCAATGTCAGTCTGACTTATGAGTGGATTCCTCCTTTCAAGCTCTACACAGTTGGCATTACAAATTGCAGTGTTGGTCCTAATTTTCCTGCATGGCTTCAGTTGCAAACTGAACTTTCTGATGTCATCCTTCGTAGCACTGGAATCTCGGGTACCATACCAGAAGAGTGGTTGTTGAAGGTATCATTGCAGCTCAAATATTTGGATTTATCATACAATCATATCAAAGGAAGGCTTCCACTCCAACTGAAATGTCCAAATCTGTATCATATAGATTTGAGCTATAATAAATTCGATGGTCCACTCCCACTTCTGTCCGCCAATCTTACTGTCTTTAATCTTGAAAGCAATTCATTTTCAGGGCCAATTCCTTCGAACATTGACCAATTGATGCCGACATTGAAAGGATTGTATCTTTCTGATAATCAGTTGGAAGGCACAATTCCACCATCCATTTGCAACTTGCAAAGATTGTCAATCCTTTCTCTGAGAAATAATCTTTTATTCGGAGAATTTCCCCAAGAATGGAGTGTGTGGCCCCGAATAGATATTGTCGACGTTGGATACAACAATCTCTCAGGTAATATGCCAAGTTCGATGGGTGTCCCAAGCTCACTTCATGTATTAAAGATGAATGATAACAATCTTGGGGGCACAATTCCTTCTTCTATATGGCGAAACTGCACGTCTTTGAGGAGTCTCGATCTTGGAGGCAACAAATTTACAGGAAACATGACTTTAAGGATAGGATCAAATGCGCCCGGGTTGTTTTTCGTACGATTGCGATCCAACTTATTAAGCGGACATATCTCCGACCAGTTGTGCAATCTTCCATTCCTTGACATCCTAGACCTTAGTCACAACAACTTCTCAGGGCCCATTCCCAAGTGTTTGAAGAATATGACGTCTTTGGTGGAAGGTTTTTCCAATGCCACTGACTATGAAAGCTATATTGAGCAAGCCAGATTGACGTTGAAGGGAAGAGAACTCGTATATAACAAAACTCTGTTCTTGGTGAAAAGCATCGACCTTTCATCGAATAATTTAGAAGGTGAAATCCCTGAAGAAATAACAAGCCTCATTGCGTTAGGTACCTTAAACTTGTCAAGAAATCAACTGAGGGGAAACATTCCTTTCAAGATCGGAAACCTGCGTTGGTTGGAAACTCTTGATCTCTCACACAATCACCTTTCAGGACAGATTCCTCAAAGTTTGTCTTCTTTAACCTCCTTATCTCACTTGAACTTGTCTTATAACAACTTGGCTGGAAAGATTCCTTCTGGGAACCAACTCCAGACACTCGAAGATCCCTCCATTTACAAGGGCAACCTTTTACTGTGTGGAGTTCCTCTTTCAACTAAGTGCCCAGGAGATGAGACTTTTACTGCTACAGATGAGAAAGACAGCAACGAAGATGGAAATGATAAGTTGTGGTTCTATGTCAGCATGGTGCTGGGTTTCACCGTAGGCTTTTGGGGTGTTTGTGGTACATTGCTTGTGAAGAAGTCATGGAGGTATGCTTATTTTCGATTGTTCGATGACATCAAAGATAAGGTAATGCTAGCAATTGCAGTCAAAGTGGCTCATTTTCAAAGGAAACTTTGA

Protein Analysis

1049

Amino Acids

117.28

Weight (kDa)

5.62

Isoelectric Point (pI)

36.7

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
LRRNT_2 PF08263 39 - 76 8.2e-12 Leucine rich repeat N-terminal domain
LRR_14 PF23598 116 - 256 4e-13 Leucine-rich repeat region
LRR_14 PF23598 404 - 554 1.5e-12 Leucine-rich repeat region
LRR_8 PF13855 405 - 462 1.1e-06 Leucine rich repeat
LRR_8 PF13855 428 - 485 5.2e-07 Leucine rich repeat
LRR_14 PF23598 863 - 948 4e-07 Leucine-rich repeat region
LRR_8 PF13855 897 - 935 4.1e-06 Leucine rich repeat
LRR_4 PF12799 901 - 939 5.9e-06 Leucine Rich repeats (2 copies)
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready

Orthologous Genes (Group: OG0000048)

Species Orthologous Gene IDs
arabidopsis_thaliana AT2G34930
fragaria_vesca FvH4_3g12670 FvH4_3g12672 FvH4_3g12740 FvH4_3g12742 FvH4_3g12770 FvH4_3g12770 FvH4_3g12860 FvH4_3g12890 FvH4_3g13431 FvH4_3g13433 FvH4_3g13435 FvH4_3g13470 FvH4_3g13470 FvH4_3g13480 FvH4_3g13562 FvH4_3g13580 FvH4_3g13600 FvH4_3g13600 FvH4_3g13600 FvH4_3g13600 FvH4_3g13600 FvH4_3g13600 FvH4_3g13610 FvH4_3g13620 FvH4_3g13620 FvH4_3g23240 FvH4_3g32910 FvH4_3g35070 FvH4_3g45520 FvH4_5g08430 FvH4_5g08450 FvH4_6g53230 FvH4_6g53300
malus_domestica MD05G1217600.v1.1 MD05G1217700.v1.1 MD05G1224700.v1.1 MD05G1225100.v1.1 MD05G1225300.v1.1 MD05G1225400.v1.1 MD05G1235900.v1.1 MD05G1236100.v1.1 MD05G1236300.v1.1 MD05G1237200.v1.1 MD05G1241600.v1.1 MD05G1245700.v1.1 MD05G1245800.v1.1 MD05G1245900.v1.1 MD05G1246000.v1.1 MD05G1246100.v1.1 MD05G1246300.v1.1 MD05G1246400.v1.1 MD05G1246500.v1.1 MD05G1248100.v1.1 MD05G1248200.v1.1 MD05G1264300.v1.1 MD05G1275900.v1.1 MD07G1051400.v1.1 MD09G1012600.v1.1 MD09G1012700.v1.1 MD09G1012800.v1.1 MD10G1221400.v1.1 MD10G1221500.v1.1 MD10G1221600.v1.1 MD10G1221900.v1.1 MD10G1222200.v1.1 MD10G1222400.v1.1 MD10G1222500.v1.1 MD10G1222900.v1.1 MD10G1223000.v1.1 MD10G1223100.v1.1 MD10G1223500.v1.1 MD10G1228000.v1.1 MD12G1019600.v1.1 MD12G1020000.v1.1 MD12G1020100.v1.1 MD17G1013200.v1.1 MD17G1013300.v1.1 MD17G1013400.v1.1
prunus_persica Prupe.1G060500_v2.0.a1 Prupe.1G100100_v2.0.a1 Prupe.3G124000_v2.0.a1 Prupe.3G304400_v2.0.a1 Prupe.4G116800_v2.0.a1 Prupe.4G116900_v2.0.a1 Prupe.4G117000_v2.0.a1 Prupe.4G121800_v2.0.a1 Prupe.4G121900_v2.0.a1 Prupe.4G122000_v2.0.a1 Prupe.4G122100_v2.0.a1 Prupe.4G122200_v2.0.a1 Prupe.4G122300_v2.0.a1 Prupe.4G122500_v2.0.a1 Prupe.4G122600_v2.0.a1 Prupe.4G122800_v2.0.a1 Prupe.4G122900_v2.0.a1 Prupe.4G123000_v2.0.a1 Prupe.4G123100_v2.0.a1 Prupe.4G123200_v2.0.a1 Prupe.4G131500_v2.0.a1 Prupe.4G131600_v2.0.a1 Prupe.7G032500_v2.0.a1 Prupe.7G032900_v2.0.a1 Prupe.7G033000_v2.0.a1 Prupe.7G033100_v2.0.a1 Prupe.7G033300_v2.0.a1 Prupe.7G033600_v2.0.a1 Prupe.7G034600_v2.0.a1 Prupe.7G040200_v2.0.a1 Prupe.7G059200_v2.0.a1
pyrus_communis pycom05g20580 pycom05g20590 pycom05g20760 pycom05g20800 pycom05g21280 pycom05g21290 pycom05g21820 pycom05g21830 pycom05g22180 pycom05g22190 pycom05g22210 pycom05g22450 pycom05g22460 pycom05g22470 pycom05g22480 pycom05g22490 pycom05g23770 pycom05g23780 pycom05g24050 pycom05g24060 pycom07g03910 pycom10g18700 pycom10g18720 pycom10g18730 pycom10g18740 pycom10g19150 pycom111g01060 pycom12g01660 pycom12g01690 pycom12g01720 pycom12g01740 pycom12g01750 pycom12g01770 pycom12g01810 pycom12g01820 pycom12g01830 pycom12g01840 pycom12g01870 pycom12g01900 pycom17g01060 pycom17g01070
rosa_chinensis RchiOBHm_Chr1g0315041 RchiOBHm_Chr1g0315051 RchiOBHm_Chr1g0315071 RchiOBHm_Chr1g0315161 RchiOBHm_Chr1g0315211 RchiOBHm_Chr1g0315251 RchiOBHm_Chr1g0315321 RchiOBHm_Chr1g0315391 RchiOBHm_Chr1g0315451 RchiOBHm_Chr1g0315481 RchiOBHm_Chr1g0315551 RchiOBHm_Chr1g0315601 RchiOBHm_Chr1g0315621 RchiOBHm_Chr1g0359221 RchiOBHm_Chr2g0142981 RchiOBHm_Chr2g0143001 RchiOBHm_Chr2g0143061 RchiOBHm_Chr2g0143091 RchiOBHm_Chr2g0175321 RchiOBHm_Chr2g0175341 RchiOBHm_Chr2g0175361 RchiOBHm_Chr2g0175371 RchiOBHm_Chr3g0470491 RchiOBHm_Chr3g0480881 RchiOBHm_Chr3g0485511 RchiOBHm_Chr5g0020741 RchiOBHm_Chr5g0020901 RchiOBHm_Chr5g0020931 RchiOBHm_Chr5g0020941 RchiOBHm_Chr5g0020961 RchiOBHm_Chr5g0020971 RchiOBHm_Chr5g0021451 RchiOBHm_Chr5g0021531 RchiOBHm_Chr5g0021831 RchiOBHm_Chr5g0021841 RchiOBHm_Chr5g0021931 RchiOBHm_Chr5g0021941 RchiOBHm_Chr5g0021981 RchiOBHm_Chr5g0021991 RchiOBHm_Chr5g0022011 RchiOBHm_Chr5g0022181 RchiOBHm_Chr5g0022191 RchiOBHm_Chr5g0022211 RchiOBHm_Chr5g0022221 RchiOBHm_Chr5g0022231 RchiOBHm_Chr5g0022291 RchiOBHm_Chr5g0022301 RchiOBHm_Chr5g0022331 RchiOBHm_Chr5g0022361 RchiOBHm_Chr5g0022371 RchiOBHm_Chr5g0022381 RchiOBHm_Chr5g0022401 RchiOBHm_Chr5g0022431 RchiOBHm_Chr5g0022451 RchiOBHm_Chr5g0022541 RchiOBHm_Chr5g0022591 RchiOBHm_Chr5g0022601 RchiOBHm_Chr5g0022701 RchiOBHm_Chr5g0022741 RchiOBHm_Chr5g0022791 RchiOBHm_Chr5g0022811 RchiOBHm_Chr5g0022851 RchiOBHm_Chr5g0029441 RchiOBHm_Chr5g0041631 RchiOBHm_Chr5g0069391 RchiOBHm_Chr6g0273811 RchiOBHm_Chr6g0273831 RchiOBHm_Chr6g0275331 RchiOBHm_Chr7g0219061
rosa_laevigata RLG00000002463 RLG00000020007 RLG00000020008 RLG00000022320 RLG00000022321 RLG00000023446 RLG00000030742 RLG00000030743 RLG00000030747 RLG00000032557 RLG00000032564 RLG00000032571 RLG00000032573 RLG00000032574 RLG00000032612 RLG00000032633 RLG00000032636 RLG00000032638 RLG00000032650 RLG00000032651 RLG00000032652 RLG00000032653 RLG00000032655 RLG00000032673 RLG00000032678 RLG00000032769 RLG00000032857 RLG00000033168 RLG00000033465 RLG00000034086 RLG00000034222 RLG00000035290
rosa_multiflora Rmu_co8143358.1_g000001 Rmu_co8518791.1_g000001 Rmu_sc0000178.1_g000008 Rmu_sc0000178.1_g000014 Rmu_sc0000401.1_g000005 Rmu_sc0000401.1_g000013 Rmu_sc0000401.1_g000017 Rmu_sc0000401.1_g000018 Rmu_sc0000401.1_g000024 Rmu_sc0000401.1_g000025 Rmu_sc0000576.1_g000020 Rmu_sc0001585.1_g000003 Rmu_sc0001585.1_g000005 Rmu_sc0001585.1_g000008 Rmu_sc0001784.1_g000006 Rmu_sc0001784.1_g000011 Rmu_sc0001784.1_g000022 Rmu_sc0001784.1_g000028 Rmu_sc0002052.1_g000004 Rmu_sc0002052.1_g000011 Rmu_sc0002277.1_g000003 Rmu_sc0002277.1_g000006 Rmu_sc0002277.1_g000024 Rmu_sc0002658.1_g000012 Rmu_sc0003512.1_g000004 Rmu_sc0003512.1_g000007 Rmu_sc0004180.1_g000016 Rmu_sc0004180.1_g000029 Rmu_sc0004180.1_g000034 Rmu_sc0005639.1_g000008 Rmu_sc0005639.1_g000023 Rmu_sc0006070.1_g000016 Rmu_sc0006070.1_g000017 Rmu_sc0006966.1_g000021 Rmu_sc0006966.1_g000023 Rmu_sc0007239.1_g000003 Rmu_sc0008460.1_g000010 Rmu_sc0009984.1_g000008 Rmu_sc0010181.1_g000005 Rmu_sc0010181.1_g000010 Rmu_sc0010503.1_g000006 Rmu_sc0011646.1_g000003 Rmu_sc0012984.1_g000011 Rmu_sc0016972.1_g000005 Rmu_sc0016972.1_g000008 Rmu_sc0023070.1_g000003 Rmu_sc0025660.1_g000001 Rmu_ssc0000322.1_g000019
rosa_roxburghii Rroxscaffold_1G00038860 Rroxscaffold_1G00053490 Rroxscaffold_1G00053500 Rroxscaffold_1G00054230 Rroxscaffold_1G00056460 Rroxscaffold_1G00056470 Rroxscaffold_1G00056480 Rroxscaffold_1G00056500 Rroxscaffold_1G00056510 Rroxscaffold_1G00056620 Rroxscaffold_1G00056690 Rroxscaffold_1G00056710 Rroxscaffold_1G00056720 Rroxscaffold_1G00056730 Rroxscaffold_1G00056740 Rroxscaffold_1G00056750 Rroxscaffold_1G00056760 Rroxscaffold_1G00056870 Rroxscaffold_1G00056900 Rroxscaffold_1G00057120 Rroxscaffold_1G00057560 Rroxscaffold_2G00077430 Rroxscaffold_2G00102160 Rroxscaffold_3G00231420 Rroxscaffold_3G00231430 Rroxscaffold_4G00297230 Rroxscaffold_4G00331570 Rroxscaffold_6G00396700 Rroxscaffold_6G00400940 Rroxscaffold_7G00192740
rosa_rugosa Rorug01G0004400 Rorug01G0004500 Rorug02G0377600 Rorug02G0378000 Rorug02G0582800 Rorug02G0583400 Rorug03G0187000 Rorug03G0218800 Rorug04G0081200 Rorug05G0062700 Rorug05G0062700 Rorug05G0063100 Rorug05G0063200 Rorug05G0063200 Rorug05G0063200 Rorug05G0067000 Rorug05G0069700 Rorug05G0069900 Rorug05G0070000 Rorug05G0070100 Rorug05G0070300 Rorug05G0070400 Rorug05G0070600 Rorug05G0070600 Rorug05G0072300 Rorug05G0072400 Rorug05G0072500 Rorug05G0072500 Rorug05G0072600.1 Rorug05G0072700 Rorug05G0072800 Rorug05G0072800 Rorug05G0072900 Rorug05G0073000 Rorug05G0073000 Rorug05G0073400 Rorug05G0073400 Rorug05G0073400 Rorug05G0074800 Rorug05G0075000 Rorug05G0114300 Rorug05G0194200 Rorug06G0097800
rosa_samantha Rh2AG401400 Rh2CG387600 Rh2CG417000 Rh2CG637400 Rh5CG169600 Rh5CG172100 Rh5CG175200 Rh5CG317100 Rh6DG187900
rosa_wichuraiana Rw1G000750 Rw1G000790 Rw1G000820 Rw1G000860 Rw1G000880 Rw1G000910 Rw2G035180 Rw2G035200 Rw2G035240 Rw2G054370 Rw2G054380 Rw5G013570 Rw5G013580 Rw5G013590 Rw5G013910 Rw5G013980 Rw5G014110 Rw5G014120 Rw5G014280 Rw5G014310 Rw5G014400 Rw5G014420 Rw5G014440 Rw5G014460 Rw5G014480 Rw5G014500 Rw5G014520 Rw5G014530 Rw5G042390

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 1 cut(s) 2796
AasI GACNNNNNNGTC 1 cut(s) 1095
AatII GACGTC 1 cut(s) 2450
Acc36I ACCTGC 1 cut(s) 2700
Acc65I GGTACC 2 cut(s) 1694, 2633
AccB1I GGYRCC 2 cut(s) 1694, 2633
AccB7I CCANNNNNTGG 1 cut(s) 98
AccI GTMKAC 2 cut(s) 1523, 2097
AccII CGCG 1 cut(s) 195
AccIII TCCGGA 1 cut(s) 1402
AciI CCGC 5 cut(s) 73, 96, 232, 1860, 2343
AclWI GGATC 5 cut(s) 155, 287, 2299, 2322, 2843
AcoI YGGCCR 1 cut(s) 577
AcuI CTGAAG 2 cut(s) 1625, 2625
AcyI GRCGYC 1 cut(s) 2447
AfaI GTAC 7 cut(s) 906, 1201, 1448, 1696, 2319, 2635, 3031
AfiI CCNNNNNNNGG 4 cut(s) 72, 98, 647, 2067
AflII CTTAAG 1 cut(s) 584
AhlI ACTAGT 1 cut(s) 965
AjiI CACGTC 1 cut(s) 2229
AjnI CCWGG 1 cut(s) 2908
AjuI GAANNNNNNNTTGG 2 cut(s) 2680, 2712
Alw21I GWGCWC 1 cut(s) 133
Alw26I GTCTC 2 cut(s) 2246, 2912
AlwI GGATC 5 cut(s) 155, 287, 2299, 2322, 2843
Ama87I CYCGRG 3 cut(s) 680, 1690, 2303
Aor13HI TCCGGA 1 cut(s) 1402
AoxI GGCC 5 cut(s) 577, 1066, 1904, 2078, 2417
ApaI GGGCCC 1 cut(s) 2421
ApeKI GCWGC 3 cut(s) 9, 777, 1732
Asp700I GAANNNNTTC 4 cut(s) 175, 404, 861, 922
Asp718I GGTACC 2 cut(s) 1694, 2633
AspLEI GCGC 1 cut(s) 2302
AspS9I GGNCC 9 cut(s) 256, 1025, 1394, 1619, 1841, 1904, 2079, 2417, 2418
AsuC2I CCSGG 3 cut(s) 1331, 2304, 2305
AsuHPI GGTGA 6 cut(s) 92, 1427, 2569, 2606, 2720, 2995
AsuII TTCGAA 4 cut(s) 408, 549, 973, 1916
AsuNHI GCTAGC 1 cut(s) 3103
AvaI CYCGRG 3 cut(s) 680, 1690, 2303
AvaII GGWCC 5 cut(s) 256, 1025, 1394, 1619, 1841
BaeGI GKGCMC 3 cut(s) 2198, 2421, 2909
BalI TGGCCA 1 cut(s) 579
BanI GGYRCC 2 cut(s) 1694, 2633
BanII GRGCYC 1 cut(s) 2421
BauI CACGAG 1 cut(s) 1035
BbsI GAAGAC 2 cut(s) 962, 2751
Bbv12I GWGCWC 1 cut(s) 133
BbvI GCAGC 2 cut(s) 789, 1744
BccI CCATC 8 cut(s) 70, 283, 678, 1199, 1832, 1999, 2134, 2951
BciT130I CCWGG 1 cut(s) 2910
BciVI GTATCC 2 cut(s) 1399, 2099
BcnI CCSGG 3 cut(s) 1331, 2304, 2305
BcoDI GTCTC 2 cut(s) 2246, 2912
BcuI ACTAGT 1 cut(s) 965
BfaI CTAG 7 cut(s) 386, 945, 966, 1430, 1439, 2390, 3104
BfmI CTRYAG 1 cut(s) 2931
BfrI CTTAAG 1 cut(s) 584
BfuAI ACCTGC 1 cut(s) 2700
BfuI GTATCC 2 cut(s) 1399, 2099
BisI GCNGC 3 cut(s) 10, 778, 1733
BlpI GCTNAGC 2 cut(s) 137, 362
BlsI GCNGC 3 cut(s) 11, 779, 1734
Bme1390I CCNGG 4 cut(s) 1331, 2304, 2305, 2910
Bme18I GGWCC 5 cut(s) 256, 1025, 1394, 1619, 1841
BmeT110I CYCGRG 3 cut(s) 680, 1690, 2303
BmgBI CACGTC 1 cut(s) 2229
BmgT120I GGNCC 9 cut(s) 256, 1025, 1394, 1619, 1841, 1904, 2079, 2417, 2418
BmiI GGNNCC 5 cut(s) 1696, 2081, 2419, 2635, 2828
BmrFI CCNGG 4 cut(s) 1331, 2304, 2305, 2910
BmsI GCATC 3 cut(s) 1263, 1923, 2574
BmtI GCTAGC 1 cut(s) 3107
BoxI GACNNNNGTC 4 cut(s) 201, 1420, 1537, 2397
BpiI GAAGAC 2 cut(s) 962, 2751
BplI GAGNNNNNCTC 2 cut(s) 120, 152
BpmI CTGGAG 2 cut(s) 264, 2819
Bpu1102I GCTNAGC 2 cut(s) 137, 362
Bpu14I TTCGAA 4 cut(s) 408, 549, 973, 1916
BpuEI CTTGAG 1 cut(s) 1322
BpuMI CCSGG 3 cut(s) 1331, 2304, 2305
BsaBI GATNNNNATC 4 cut(s) 297, 1507, 2184, 2326
BsaHI GRCGYC 1 cut(s) 2447
BsaJI CCNNGG 5 cut(s) 646, 679, 1267, 2303, 2908
BsaWI WCCGGW 1 cut(s) 1402
Bsc4I CCNNNNNNNGG 4 cut(s) 72, 98, 647, 2067
Bse1I ACTGG 5 cut(s) 281, 1027, 1227, 1687, 2359
Bse3DI GCAATG 3 cut(s) 1727, 2622, 3032
Bse8I GATNNNNATC 4 cut(s) 297, 1507, 2184, 2326
BseAI TCCGGA 1 cut(s) 1402
BseBI CCWGG 1 cut(s) 2910
BseDI CCNNGG 5 cut(s) 646, 679, 1267, 2303, 2908
BseGI GGATG 6 cut(s) 81, 1278, 1352, 1668, 1991, 2385
BseJI GATNNNNATC 4 cut(s) 297, 1507, 2184, 2326
BseLI CCNNNNNNNGG 4 cut(s) 72, 98, 647, 2067
BseMI GCAATG 3 cut(s) 1727, 2622, 3032
BseMII CTCAG 9 cut(s) 151, 474, 977, 1387, 1416, 2021, 2133, 2427, 2651
BseNI ACTGG 5 cut(s) 281, 1027, 1227, 1687, 2359
BseRI GAGGAG 2 cut(s) 141, 2251
BseSI GKGCMC 3 cut(s) 2198, 2421, 2909
BseXI GCAGC 2 cut(s) 789, 1744
BseYI CCCAGC 1 cut(s) 2995
BsgI GTGCAG 1 cut(s) 2209
Bsh1236I CGCG 1 cut(s) 195
BshFI GGCC 5 cut(s) 579, 1068, 1906, 2080, 2419
BshNI GGYRCC 2 cut(s) 1694, 2633
BsiHKAI GWGCWC 1 cut(s) 133
BsiHKCI CYCGRG 3 cut(s) 680, 1690, 2303
BsiSI CCGG 3 cut(s) 1331, 1403, 2304
BsiWI CGTACG 1 cut(s) 2317
BslFI GGGAC 4 cut(s) 116, 1428, 1525, 2132
BslI CCNNNNNNNGG 4 cut(s) 72, 98, 647, 2067
BsmAI GTCTC 2 cut(s) 2246, 2912
BsmFI GGGAC 4 cut(s) 116, 1428, 1525, 2132
BsnI GGCC 5 cut(s) 579, 1068, 1906, 2080, 2419
BsoBI CYCGRG 3 cut(s) 680, 1690, 2303
Bsp119I TTCGAA 4 cut(s) 408, 549, 973, 1916
Bsp120I GGGCCC 1 cut(s) 2417
Bsp1286I GDGCHC 4 cut(s) 133, 2198, 2421, 2909
Bsp13I TCCGGA 1 cut(s) 1402
Bsp1407I TGTACA 1 cut(s) 1199
Bsp1720I GCTNAGC 2 cut(s) 137, 362
BspACI CCGC 5 cut(s) 73, 96, 232, 1860, 2343
BspANI GGCC 5 cut(s) 579, 1068, 1906, 2080, 2419
BspCNI CTCAG 9 cut(s) 150, 475, 978, 1386, 1417, 2022, 2132, 2426, 2652
BspEI TCCGGA 1 cut(s) 1402
BspFNI CGCG 1 cut(s) 195
BspLI GGNNCC 5 cut(s) 1696, 2081, 2419, 2635, 2828
BspMI ACCTGC 1 cut(s) 2700
BspOI GCTAGC 1 cut(s) 3107
BspPI GGATC 5 cut(s) 155, 287, 2299, 2322, 2843
BspT104I TTCGAA 4 cut(s) 408, 549, 973, 1916
BspT107I GGYRCC 2 cut(s) 1694, 2633
BspTI CTTAAG 1 cut(s) 584
BsrDI GCAATG 3 cut(s) 1727, 2622, 3032
BsrGI TGTACA 1 cut(s) 1199
BsrI ACTGG 5 cut(s) 281, 1027, 1227, 1687, 2359
BssECI CCNNGG 5 cut(s) 646, 679, 1267, 2303, 2908
BssNI GRCGYC 1 cut(s) 2447
BssSI CACGAG 1 cut(s) 1035
BssT1I CCWWGG 2 cut(s) 646, 1267
Bst2BI CACGAG 1 cut(s) 1035
Bst2UI CCWGG 1 cut(s) 2910
Bst4CI ACNGT 7 cut(s) 58, 404, 1199, 1594, 1873, 2880, 3007
Bst6I CTCTTC 5 cut(s) 114, 546, 742, 1701, 2518
BstACI GRCGYC 1 cut(s) 2447
BstAFI CTTAAG 1 cut(s) 584
BstAUI TGTACA 1 cut(s) 1199
BstBI TTCGAA 4 cut(s) 408, 549, 973, 1916
BstC8I GCNNGC 4 cut(s) 581, 1124, 2502, 3105
BstF5I GGATG 6 cut(s) 81, 1278, 1352, 1668, 1991, 2385
BstFNI CGCG 1 cut(s) 195
BstHHI GCGC 1 cut(s) 2302
BstMAI GTCTC 2 cut(s) 2246, 2912
BstMWI GCNNNNNNNGC 3 cut(s) 231, 820, 1645
BstNI CCWGG 1 cut(s) 2910
BstNSI RCATGY 2 cut(s) 73, 814
BstPAI GACNNNNGTC 4 cut(s) 201, 1420, 1537, 2397
BstSCI CCNGG 4 cut(s) 1329, 2302, 2303, 2908
BstSFI CTRYAG 1 cut(s) 2931
BstSLI GKGCMC 3 cut(s) 2198, 2421, 2909
BstUI CGCG 1 cut(s) 195
BstV1I GCAGC 2 cut(s) 789, 1744
BstV2I GAAGAC 2 cut(s) 962, 2751
BstX2I RGATCY 1 cut(s) 2848
BstXI CCANNNNNNTGG 1 cut(s) 1710
BstYI RGATCY 1 cut(s) 2848
BsuI GTATCC 2 cut(s) 1399, 2099
BsuRI GGCC 5 cut(s) 579, 1068, 1906, 2080, 2419
BtrI CACGTC 1 cut(s) 2229
BtsCI GGATG 6 cut(s) 81, 1278, 1352, 1668, 1991, 2385
BtsI GCAGTG 2 cut(s) 131, 1618
BtsIMutI CAGTG 6 cut(s) 131, 1020, 1220, 1618, 1680, 2475
BveI ACCTGC 1 cut(s) 2700
Cac8I GCNNGC 4 cut(s) 581, 1124, 2502, 3105
CfoI GCGC 1 cut(s) 2302
Cfr13I GGNCC 9 cut(s) 256, 1025, 1394, 1619, 1841, 1904, 2079, 2417, 2418
Cfr9I CCCGGG 1 cut(s) 2303
CseI GACGC 1 cut(s) 201
Csp6I GTAC 7 cut(s) 905, 1200, 1447, 1695, 2318, 2634, 3030
CspCI CAANNNNNGTGG 2 cut(s) 1141, 1176
CviQI GTAC 7 cut(s) 905, 1200, 1447, 1695, 2318, 2634, 3030
DraI TTTAAA 1 cut(s) 378
DrdI GACNNNNNNGTC 1 cut(s) 1095
DseDI GACNNNNNNGTC 1 cut(s) 1095
EaeI YGGCCR 1 cut(s) 577
Eam1104I CTCTTC 5 cut(s) 114, 546, 742, 1701, 2518
EarI CTCTTC 5 cut(s) 114, 546, 742, 1701, 2518
EciI GGCGGA 1 cut(s) 1849
Eco130I CCWWGG 2 cut(s) 646, 1267
Eco147I AGGCCT 1 cut(s) 1068
Eco24I GRGCYC 1 cut(s) 2421
Eco32I GATATC 2 cut(s) 607, 913
Eco47I GGWCC 5 cut(s) 256, 1025, 1394, 1619, 1841
Eco57I CTGAAG 2 cut(s) 1625, 2625
Eco88I CYCGRG 3 cut(s) 680, 1690, 2303
EcoO109I RGGNCCY 1 cut(s) 2417
EcoRI GAATTC 4 cut(s) 861, 922, 1167, 1453
EcoRII CCWGG 1 cut(s) 2908
EcoRV GATATC 2 cut(s) 607, 913
EcoT14I CCWWGG 2 cut(s) 646, 1267
EcoT22I ATGCAT 1 cut(s) 113
EcoT38I GRGCYC 1 cut(s) 2421
ErhI CCWWGG 2 cut(s) 646, 1267
FalI AAGNNNNNCTT 6 cut(s) 163, 195, 1761, 1793, 2743, 2775
FaqI GGGAC 4 cut(s) 116, 1428, 1525, 2132
FblI GTMKAC 2 cut(s) 1523, 2097
Fnu4HI GCNGC 3 cut(s) 10, 778, 1733
FokI GGATG 6 cut(s) 88, 1285, 1339, 1655, 1978, 2372
FriOI GRGCYC 1 cut(s) 2421
Fsp4HI GCNGC 3 cut(s) 10, 778, 1733
FspBI CTAG 7 cut(s) 386, 945, 966, 1430, 1439, 2390, 3104
GlaI GCGC 1 cut(s) 2301
GluI GCNGC 3 cut(s) 10, 778, 1733
GsaI CCCAGC 1 cut(s) 2999
GsuI CTGGAG 2 cut(s) 264, 2819
HaeIII GGCC 5 cut(s) 579, 1068, 1906, 2080, 2419
HapII CCGG 3 cut(s) 1331, 1403, 2304
HgaI GACGC 1 cut(s) 201
HhaI GCGC 1 cut(s) 2302
Hin1I GRCGYC 1 cut(s) 2447
Hin6I GCGC 1 cut(s) 2300
HinP1I GCGC 1 cut(s) 2300
HincII GTYRAC 3 cut(s) 808, 1297, 2098
HindII GTYRAC 3 cut(s) 808, 1297, 2098
HpaI GTTAAC 1 cut(s) 808
HpaII CCGG 3 cut(s) 1331, 1403, 2304
HphI GGTGA 6 cut(s) 92, 1427, 2569, 2606, 2720, 2995
Hpy166II GTNNAC 9 cut(s) 34, 54, 256, 808, 1297, 1435, 1524, 1844, 2098
Hpy8I GTNNAC 9 cut(s) 34, 54, 256, 808, 1297, 1435, 1524, 1844, 2098
Hpy99I CGWCG 1 cut(s) 2102
HpyCH4III ACNGT 7 cut(s) 58, 404, 1199, 1594, 1873, 2880, 3007
HpyCH4IV ACGT 5 cut(s) 619, 2100, 2228, 2447, 2513
HpyF10VI GCNNNNNNNGC 3 cut(s) 231, 820, 1645
HpySE526I ACGT 5 cut(s) 619, 2100, 2228, 2447, 2513
Hsp92I GRCGYC 1 cut(s) 2447
HspAI GCGC 1 cut(s) 2300
Kpn2I TCCGGA 1 cut(s) 1402
KpnI GGTACC 2 cut(s) 1698, 2637
KspAI GTTAAC 1 cut(s) 808
LmnI GCTCC 3 cut(s) 128, 479, 785
Lsp1109I GCAGC 2 cut(s) 789, 1744
LweI GCATC 3 cut(s) 1263, 1923, 2574
MaeI CTAG 7 cut(s) 386, 945, 966, 1430, 1439, 2390, 3104
MaeII ACGT 5 cut(s) 619, 2100, 2228, 2447, 2513
MaeIII GTNAC 5 cut(s) 58, 80, 154, 1376, 2399
MfeI CAATTG 3 cut(s) 1418, 1928, 3108
MflI RGATCY 1 cut(s) 2848
MhlI GDGCHC 4 cut(s) 133, 2198, 2421, 2909
MlsI TGGCCA 1 cut(s) 579
MluNI TGGCCA 1 cut(s) 579
MlyI GAGTC 4 cut(s) 98, 1083, 1256, 2248
MmeI TCCRAC 6 cut(s) 1810, 1953, 2083, 2355, 2379, 2682
Mox20I TGGCCA 1 cut(s) 579
Mph1103I ATGCAT 1 cut(s) 113
MroI TCCGGA 1 cut(s) 1402
MroXI GAANNNNTTC 4 cut(s) 175, 404, 861, 922
MscI TGGCCA 1 cut(s) 579
MslI CAYNNNNRTG 1 cut(s) 74
Msp20I TGGCCA 1 cut(s) 579
MspCI CTTAAG 1 cut(s) 584
MspI CCGG 3 cut(s) 1331, 1403, 2304
MspR9I CCNGG 4 cut(s) 1331, 2304, 2305, 2910
MunI CAATTG 3 cut(s) 1418, 1928, 3108
MvaI CCWGG 1 cut(s) 2910
MvnI CGCG 1 cut(s) 195
MwoI GCNNNNNNNGC 3 cut(s) 231, 820, 1645
NciI CCSGG 3 cut(s) 1331, 2304, 2305
NheI GCTAGC 1 cut(s) 3103
NlaIV GGNNCC 5 cut(s) 1696, 2081, 2419, 2635, 2828
NmuCI GTSAC 3 cut(s) 58, 80, 2399
NsiI ATGCAT 1 cut(s) 113
NspI RCATGY 2 cut(s) 73, 814
NspV TTCGAA 4 cut(s) 408, 549, 973, 1916
PceI AGGCCT 1 cut(s) 1068
PdmI GAANNNNTTC 4 cut(s) 175, 404, 861, 922
Pfl23II CGTACG 1 cut(s) 2317
PflFI GACNNNGTC 1 cut(s) 764
PflMI CCANNNNNTGG 1 cut(s) 98
PfoI TCCNGGA 1 cut(s) 1329
PkrI GCNGC 3 cut(s) 11, 779, 1734
PleI GAGTC 4 cut(s) 98, 1083, 1256, 2247
PpsI GAGTC 4 cut(s) 98, 1083, 1256, 2247
PshAI GACNNNNGTC 4 cut(s) 201, 1420, 1537, 2397
PsiI TTATAA 1 cut(s) 2796
Psp6I CCWGG 1 cut(s) 2908
PspFI CCCAGC 1 cut(s) 2995
PspGI CCWGG 1 cut(s) 2908
PspLI CGTACG 1 cut(s) 2317
PspN4I GGNNCC 5 cut(s) 1696, 2081, 2419, 2635, 2828
PspOMI GGGCCC 1 cut(s) 2417
PspPI GGNCC 9 cut(s) 256, 1025, 1394, 1619, 1841, 1904, 2079, 2417, 2418
PsuI RGATCY 1 cut(s) 2848
PsyI GACNNNGTC 1 cut(s) 764
RsaI GTAC 7 cut(s) 906, 1201, 1448, 1696, 2319, 2635, 3031
RsaNI GTAC 7 cut(s) 905, 1200, 1447, 1695, 2318, 2634, 3030
RseI CAYNNNNRTG 1 cut(s) 74
SalI GTCGAC 1 cut(s) 2096
SatI GCNGC 3 cut(s) 10, 778, 1733
Sau96I GGNCC 9 cut(s) 256, 1025, 1394, 1619, 1841, 1904, 2079, 2417, 2418
SchI GAGTC 4 cut(s) 98, 1083, 1256, 2248
ScrFI CCNGG 4 cut(s) 1331, 2304, 2305, 2910
SduI GDGCHC 4 cut(s) 133, 2198, 2421, 2909
SfaNI GCATC 3 cut(s) 1263, 1923, 2574
SfcI CTRYAG 1 cut(s) 2931
SfuI TTCGAA 4 cut(s) 408, 549, 973, 1916
SinI GGWCC 5 cut(s) 256, 1025, 1394, 1619, 1841
SmaI CCCGGG 1 cut(s) 2305
SmiI ATTTAAAT 1 cut(s) 378
SmiMI CAYNNNNRTG 1 cut(s) 74
SmlI CTYRAG 2 cut(s) 584, 1301
SmoI CTYRAG 2 cut(s) 584, 1301
SpeI ACTAGT 1 cut(s) 965
SseBI AGGCCT 1 cut(s) 1068
SsiI CCGC 5 cut(s) 73, 96, 232, 1860, 2343
SspI AATATT 1 cut(s) 1742
SspMI CTAG 7 cut(s) 386, 945, 966, 1430, 1439, 2390, 3104
StuI AGGCCT 1 cut(s) 1068
StyD4I CCNGG 4 cut(s) 1329, 2302, 2303, 2908
StyI CCWWGG 2 cut(s) 646, 1267
SwaI ATTTAAAT 1 cut(s) 378
TaaI ACNGT 7 cut(s) 58, 404, 1199, 1594, 1873, 2880, 3007
TaiI ACGT 5 cut(s) 622, 2103, 2231, 2450, 2516
TaqII GACCGA 1 cut(s) 1411
TatI WGTACW 1 cut(s) 1199
TscAI CASTG 6 cut(s) 138, 1027, 1227, 1618, 1687, 2482
TseFI GTSAC 3 cut(s) 58, 80, 2399
TseI GCWGC 3 cut(s) 9, 777, 1732
Tsp45I GTSAC 3 cut(s) 58, 80, 2399
TspDTI ATGAA 9 cut(s) 336, 935, 1011, 1446, 1884, 2150, 2189, 2499, 2565
TspGWI ACGGA 1 cut(s) 99
TspMI CCCGGG 1 cut(s) 2303
TspRI CASTG 6 cut(s) 138, 1027, 1227, 1618, 1687, 2482
Tth111I GACNNNGTC 1 cut(s) 764
Van91I CCANNNNNTGG 1 cut(s) 98
Vha464I CTTAAG 1 cut(s) 584
VpaK11BI GGWCC 5 cut(s) 256, 1025, 1394, 1619, 1841
XceI RCATGY 2 cut(s) 73, 814
XcmI CCANNNNNNNNNTGG 2 cut(s) 282, 945
XmaI CCCGGG 1 cut(s) 2303
XmiI GTMKAC 2 cut(s) 1523, 2097
XmnI GAANNNNTTC 4 cut(s) 175, 404, 861, 922
XspI CTAG 7 cut(s) 386, 945, 966, 1430, 1439, 2390, 3104
ZraI GACGTC 1 cut(s) 2448
Zsp2I ATGCAT 1 cut(s) 113
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.