Rw5G013590

LRR receptor-like serine threonine-protein kinase

Basic Information

Type: gene
Biological Identity
rosa_wichuraiana
Chr5
Physical Location & Seq
Reverse (-)
16037220 .. 16039934
2715 bp
Loading structure...
UTR
Exon/CDS
Intron
Rw5G013590.1

Sequence Viewer

Length: 2202 bp
ATGTTTGTGAACTCATCATGCATCGATGAAGAAAGACGAGCACTCATTAGCTTTAAAGAGGGTATCGTTGATCCTTCTGGTAGGCTTTCTTCTTGGGTGGGCAACGATTGCTGTCAATGGAGTGGTATTTCATGCAACAACGGCACGGGTAGAATTCCGAAACTCATTGGAAACTTGTGCAAGCTAAAGACATTAAATCTTGCGGGAAATAATTTTGATGGGGGTTTTGAGGATTTGTTGAATGGTTTCTCATATTGCACAAGTAATTCATTAGAGTCAATAGATGTGTCTGTAAATAGGTTGGTGAGTGAATTGCCTACCTCCTTGGGAATGCTAAAAAGCCTTCAACATCTTCACCTCAACCTGAACTCTTTTTGGGGCTCTATTCCAGAATCTATTGGAAACTTGTCATCTTTGGAAACACTAGATCTCTTTGCAAATCAAATGAACGGGTCGATACCTGAAAGTTTTGGACAACTCTCTAAACTAGTTCACCTAGATCTTTCTTTGAATTCGTGGGAAGGCATTTTAAGGGAAGCACATATGATAAACCTAACAAGTTTAGAGTACATGGCACTAGACACAGACCGACCCATGTCCCTCATTTTTAATGTAAGTCATGAGTGGGTTCCTCCTTTCAAGCTACAAACAATTCAAATTAGAGACTGTCAAGTAGGTTCTTTTGGCGTATGGCTTCAATCCCAAACTGAACTAGAGGATGTCACCCTTCATAATACTAGAATTTTGGATTTCATACCAAATGAATGGTTTTTGAAGATATCTTCCCGAGTTGAATATTTGGATTTATCTTACAACCAAATCCATGGAAAGCTTCCATTCCATCTGAAATTTCCAAAACTACGAGCTATATATTTGAGTCATAATCAATTTGATGGCTCACTTCCACTTTGGTCTACTAATGCCAGCCTCCTTGGTCTTGAAAGCAATTCATTTTCAGGGCCAATACCCTCGAACTTTGATCAGTTGTTTCCCAACATAAAGGAATTGTATCTATCCGATAATCAATTCAATGGTACTATTCCACCCTCTATTTGCAACATCCAAAGCTTGTCAATCTTTTCAGCAAGAAGCAATCACTTATCTGGGGAGTTCCCTCAAGTTTGGAGTTTGTGGCCACAAATATTGATAGTAGATGTAGGGAACAACAGTCTTTCCGGTAATATCCCCACTTCTTTGGGTGTACCGAGATCTCTTCTTATGTTGATCATGAACAACAACAATTTTGTAGGGAACATTCCATCTTCCTTGAAAAATTGTTCTTTTATGAGGGTTGATCTAGGAGGCAACAGATTTACCGGAGAAGTACCTTTATGGATCGGCAACATGACCGGTTTGTCCATGCTTCGATTGAGGTCCAACTTTCTAGCCGGACACATCCCTCACCAGTTGTGCTATCTCACCGACCTGCGTATCCTAGACCTTGGTGACAACAACTTTTCAGGGACTATTCCGAAGTGTTTGAATAACTTGACTTTCCTAACATTCCGTGACAGCCACCAAACGGATTACATATATACAGGAGAATCAACAAGGATGACACTGAAAGGAAGCGAACTCGACTATACAATCAGCAACTTGTACTTGGTGAAGAGCATTGATCTTTCATCAAATAATTTAGAAGGTGGAATTCCTGAACAAATAAGCAGCCTCGTTGGATTGGGAGCCCTAAACTTGTCGATGAATCAATTGAGTGGAAATATTTCCACCAAGATTGGAAACTTGCGTTGGTTGGAAACTCTTGATCTCTCACACAACCATCTTTCGGGACAGATTCCTCAAAGCTTGTCTTCTTTGACATTTTTGTCACACTTGAACTTGTCTTATAACAACCTGTCCGGAAGAATCCCTTCAGGCCCCCAACTCCAAACACAAGAGAATTCATCATATGTGGGGAATCCATCGCTCTGTGGATTTCCTCTTTCAACCAAGTGCGAGGGGTATGACACACCTACACAACAAACTTTGCTCGGAGGGGACGGTGAAGATGAAGATGACAACGGGAAGCTTGGTTTCTATATCAGCATGGTCCTTGGGTTTGTCATAAGCTTTTGGGGCGTTTGTGGCACTTTGCTCCTGAAGAAGTCATGGAGGTATGCTTATTTTCAATTCTTTGACAACATCAAAGACAAAATAGCACTGGCAATTGCATTGAAAGTCGCTCATTTTCAAAGAAGGTTTTGA

Protein Analysis

733

Amino Acids

81.62

Weight (kDa)

5.59

Isoelectric Point (pI)

32.1

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
LRRNT_2 PF08263 9 - 46 3.7e-13 Leucine rich repeat N-terminal domain
LRR_14 PF23598 52 - 234 7e-14 Leucine-rich repeat region
LRR_8 PF13855 237 - 297 1.5e-06 Leucine rich repeat
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready

Orthologous Genes (Group: OG0000048)

Species Orthologous Gene IDs
arabidopsis_thaliana AT2G34930
fragaria_vesca FvH4_3g12670 FvH4_3g12672 FvH4_3g12740 FvH4_3g12742 FvH4_3g12770 FvH4_3g12770 FvH4_3g12860 FvH4_3g12890 FvH4_3g13431 FvH4_3g13433 FvH4_3g13435 FvH4_3g13470 FvH4_3g13470 FvH4_3g13480 FvH4_3g13562 FvH4_3g13580 FvH4_3g13600 FvH4_3g13600 FvH4_3g13600 FvH4_3g13600 FvH4_3g13600 FvH4_3g13600 FvH4_3g13610 FvH4_3g13620 FvH4_3g13620 FvH4_3g23240 FvH4_3g32910 FvH4_3g35070 FvH4_3g45520 FvH4_5g08430 FvH4_5g08450 FvH4_6g53230 FvH4_6g53300
malus_domestica MD05G1217600.v1.1 MD05G1217700.v1.1 MD05G1224700.v1.1 MD05G1225100.v1.1 MD05G1225300.v1.1 MD05G1225400.v1.1 MD05G1235900.v1.1 MD05G1236100.v1.1 MD05G1236300.v1.1 MD05G1237200.v1.1 MD05G1241600.v1.1 MD05G1245700.v1.1 MD05G1245800.v1.1 MD05G1245900.v1.1 MD05G1246000.v1.1 MD05G1246100.v1.1 MD05G1246300.v1.1 MD05G1246400.v1.1 MD05G1246500.v1.1 MD05G1248100.v1.1 MD05G1248200.v1.1 MD05G1264300.v1.1 MD05G1275900.v1.1 MD07G1051400.v1.1 MD09G1012600.v1.1 MD09G1012700.v1.1 MD09G1012800.v1.1 MD10G1221400.v1.1 MD10G1221500.v1.1 MD10G1221600.v1.1 MD10G1221900.v1.1 MD10G1222200.v1.1 MD10G1222400.v1.1 MD10G1222500.v1.1 MD10G1222900.v1.1 MD10G1223000.v1.1 MD10G1223100.v1.1 MD10G1223500.v1.1 MD10G1228000.v1.1 MD12G1019600.v1.1 MD12G1020000.v1.1 MD12G1020100.v1.1 MD17G1013200.v1.1 MD17G1013300.v1.1 MD17G1013400.v1.1
prunus_persica Prupe.1G060500_v2.0.a1 Prupe.1G100100_v2.0.a1 Prupe.3G124000_v2.0.a1 Prupe.3G304400_v2.0.a1 Prupe.4G116800_v2.0.a1 Prupe.4G116900_v2.0.a1 Prupe.4G117000_v2.0.a1 Prupe.4G121800_v2.0.a1 Prupe.4G121900_v2.0.a1 Prupe.4G122000_v2.0.a1 Prupe.4G122100_v2.0.a1 Prupe.4G122200_v2.0.a1 Prupe.4G122300_v2.0.a1 Prupe.4G122500_v2.0.a1 Prupe.4G122600_v2.0.a1 Prupe.4G122800_v2.0.a1 Prupe.4G122900_v2.0.a1 Prupe.4G123000_v2.0.a1 Prupe.4G123100_v2.0.a1 Prupe.4G123200_v2.0.a1 Prupe.4G131500_v2.0.a1 Prupe.4G131600_v2.0.a1 Prupe.7G032500_v2.0.a1 Prupe.7G032900_v2.0.a1 Prupe.7G033000_v2.0.a1 Prupe.7G033100_v2.0.a1 Prupe.7G033300_v2.0.a1 Prupe.7G033600_v2.0.a1 Prupe.7G034600_v2.0.a1 Prupe.7G040200_v2.0.a1 Prupe.7G059200_v2.0.a1
pyrus_communis pycom05g20580 pycom05g20590 pycom05g20760 pycom05g20800 pycom05g21280 pycom05g21290 pycom05g21820 pycom05g21830 pycom05g22180 pycom05g22190 pycom05g22210 pycom05g22450 pycom05g22460 pycom05g22470 pycom05g22480 pycom05g22490 pycom05g23770 pycom05g23780 pycom05g24050 pycom05g24060 pycom07g03910 pycom10g18700 pycom10g18720 pycom10g18730 pycom10g18740 pycom10g19150 pycom111g01060 pycom12g01660 pycom12g01690 pycom12g01720 pycom12g01740 pycom12g01750 pycom12g01770 pycom12g01810 pycom12g01820 pycom12g01830 pycom12g01840 pycom12g01870 pycom12g01900 pycom17g01060 pycom17g01070
rosa_chinensis RchiOBHm_Chr1g0315041 RchiOBHm_Chr1g0315051 RchiOBHm_Chr1g0315071 RchiOBHm_Chr1g0315161 RchiOBHm_Chr1g0315211 RchiOBHm_Chr1g0315251 RchiOBHm_Chr1g0315321 RchiOBHm_Chr1g0315391 RchiOBHm_Chr1g0315451 RchiOBHm_Chr1g0315481 RchiOBHm_Chr1g0315551 RchiOBHm_Chr1g0315601 RchiOBHm_Chr1g0315621 RchiOBHm_Chr1g0359221 RchiOBHm_Chr2g0142981 RchiOBHm_Chr2g0143001 RchiOBHm_Chr2g0143061 RchiOBHm_Chr2g0143091 RchiOBHm_Chr2g0175321 RchiOBHm_Chr2g0175341 RchiOBHm_Chr2g0175361 RchiOBHm_Chr2g0175371 RchiOBHm_Chr3g0470491 RchiOBHm_Chr3g0480881 RchiOBHm_Chr3g0485511 RchiOBHm_Chr5g0020741 RchiOBHm_Chr5g0020901 RchiOBHm_Chr5g0020931 RchiOBHm_Chr5g0020941 RchiOBHm_Chr5g0020961 RchiOBHm_Chr5g0020971 RchiOBHm_Chr5g0021451 RchiOBHm_Chr5g0021531 RchiOBHm_Chr5g0021831 RchiOBHm_Chr5g0021841 RchiOBHm_Chr5g0021931 RchiOBHm_Chr5g0021941 RchiOBHm_Chr5g0021981 RchiOBHm_Chr5g0021991 RchiOBHm_Chr5g0022011 RchiOBHm_Chr5g0022181 RchiOBHm_Chr5g0022191 RchiOBHm_Chr5g0022211 RchiOBHm_Chr5g0022221 RchiOBHm_Chr5g0022231 RchiOBHm_Chr5g0022291 RchiOBHm_Chr5g0022301 RchiOBHm_Chr5g0022331 RchiOBHm_Chr5g0022361 RchiOBHm_Chr5g0022371 RchiOBHm_Chr5g0022381 RchiOBHm_Chr5g0022401 RchiOBHm_Chr5g0022431 RchiOBHm_Chr5g0022451 RchiOBHm_Chr5g0022541 RchiOBHm_Chr5g0022591 RchiOBHm_Chr5g0022601 RchiOBHm_Chr5g0022701 RchiOBHm_Chr5g0022741 RchiOBHm_Chr5g0022791 RchiOBHm_Chr5g0022811 RchiOBHm_Chr5g0022851 RchiOBHm_Chr5g0029441 RchiOBHm_Chr5g0041631 RchiOBHm_Chr5g0069391 RchiOBHm_Chr6g0273811 RchiOBHm_Chr6g0273831 RchiOBHm_Chr6g0275331 RchiOBHm_Chr7g0219061
rosa_laevigata RLG00000002463 RLG00000020007 RLG00000020008 RLG00000022320 RLG00000022321 RLG00000023446 RLG00000030742 RLG00000030743 RLG00000030747 RLG00000032557 RLG00000032564 RLG00000032571 RLG00000032573 RLG00000032574 RLG00000032612 RLG00000032633 RLG00000032636 RLG00000032638 RLG00000032650 RLG00000032651 RLG00000032652 RLG00000032653 RLG00000032655 RLG00000032673 RLG00000032678 RLG00000032769 RLG00000032857 RLG00000033168 RLG00000033465 RLG00000034086 RLG00000034222 RLG00000035290
rosa_multiflora Rmu_co8143358.1_g000001 Rmu_co8518791.1_g000001 Rmu_sc0000178.1_g000008 Rmu_sc0000178.1_g000014 Rmu_sc0000401.1_g000005 Rmu_sc0000401.1_g000013 Rmu_sc0000401.1_g000017 Rmu_sc0000401.1_g000018 Rmu_sc0000401.1_g000024 Rmu_sc0000401.1_g000025 Rmu_sc0000576.1_g000020 Rmu_sc0001585.1_g000003 Rmu_sc0001585.1_g000005 Rmu_sc0001585.1_g000008 Rmu_sc0001784.1_g000006 Rmu_sc0001784.1_g000011 Rmu_sc0001784.1_g000022 Rmu_sc0001784.1_g000028 Rmu_sc0002052.1_g000004 Rmu_sc0002052.1_g000011 Rmu_sc0002277.1_g000003 Rmu_sc0002277.1_g000006 Rmu_sc0002277.1_g000024 Rmu_sc0002658.1_g000012 Rmu_sc0003512.1_g000004 Rmu_sc0003512.1_g000007 Rmu_sc0004180.1_g000016 Rmu_sc0004180.1_g000029 Rmu_sc0004180.1_g000034 Rmu_sc0005639.1_g000008 Rmu_sc0005639.1_g000023 Rmu_sc0006070.1_g000016 Rmu_sc0006070.1_g000017 Rmu_sc0006966.1_g000021 Rmu_sc0006966.1_g000023 Rmu_sc0007239.1_g000003 Rmu_sc0008460.1_g000010 Rmu_sc0009984.1_g000008 Rmu_sc0010181.1_g000005 Rmu_sc0010181.1_g000010 Rmu_sc0010503.1_g000006 Rmu_sc0011646.1_g000003 Rmu_sc0012984.1_g000011 Rmu_sc0016972.1_g000005 Rmu_sc0016972.1_g000008 Rmu_sc0023070.1_g000003 Rmu_sc0025660.1_g000001 Rmu_ssc0000322.1_g000019
rosa_roxburghii Rroxscaffold_1G00038860 Rroxscaffold_1G00053490 Rroxscaffold_1G00053500 Rroxscaffold_1G00054230 Rroxscaffold_1G00056460 Rroxscaffold_1G00056470 Rroxscaffold_1G00056480 Rroxscaffold_1G00056500 Rroxscaffold_1G00056510 Rroxscaffold_1G00056620 Rroxscaffold_1G00056690 Rroxscaffold_1G00056710 Rroxscaffold_1G00056720 Rroxscaffold_1G00056730 Rroxscaffold_1G00056740 Rroxscaffold_1G00056750 Rroxscaffold_1G00056760 Rroxscaffold_1G00056870 Rroxscaffold_1G00056900 Rroxscaffold_1G00057120 Rroxscaffold_1G00057560 Rroxscaffold_2G00077430 Rroxscaffold_2G00102160 Rroxscaffold_3G00231420 Rroxscaffold_3G00231430 Rroxscaffold_4G00297230 Rroxscaffold_4G00331570 Rroxscaffold_6G00396700 Rroxscaffold_6G00400940 Rroxscaffold_7G00192740
rosa_rugosa Rorug01G0004400 Rorug01G0004500 Rorug02G0377600 Rorug02G0378000 Rorug02G0582800 Rorug02G0583400 Rorug03G0187000 Rorug03G0218800 Rorug04G0081200 Rorug05G0062700 Rorug05G0062700 Rorug05G0063100 Rorug05G0063200 Rorug05G0063200 Rorug05G0063200 Rorug05G0067000 Rorug05G0069700 Rorug05G0069900 Rorug05G0070000 Rorug05G0070100 Rorug05G0070300 Rorug05G0070400 Rorug05G0070600 Rorug05G0070600 Rorug05G0072300 Rorug05G0072400 Rorug05G0072500 Rorug05G0072500 Rorug05G0072600.1 Rorug05G0072700 Rorug05G0072800 Rorug05G0072800 Rorug05G0072900 Rorug05G0073000 Rorug05G0073000 Rorug05G0073400 Rorug05G0073400 Rorug05G0073400 Rorug05G0074800 Rorug05G0075000 Rorug05G0114300 Rorug05G0194200 Rorug06G0097800
rosa_samantha Rh2AG401400 Rh2CG387600 Rh2CG417000 Rh2CG637400 Rh5CG169600 Rh5CG172100 Rh5CG175200 Rh5CG317100 Rh6DG187900
rosa_wichuraiana Rw1G000750 Rw1G000790 Rw1G000820 Rw1G000860 Rw1G000880 Rw1G000910 Rw2G035180 Rw2G035200 Rw2G035240 Rw2G054370 Rw2G054380 Rw5G013570 Rw5G013580 Rw5G013590 Rw5G013910 Rw5G013980 Rw5G014110 Rw5G014120 Rw5G014280 Rw5G014310 Rw5G014400 Rw5G014420 Rw5G014440 Rw5G014460 Rw5G014480 Rw5G014500 Rw5G014520 Rw5G014530 Rw5G042390

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 1 cut(s) 1845
AasI GACNNNNNNGTC 2 cut(s) 1354, 1822
Acc36I ACCTGC 1 cut(s) 1434
AccI GTMKAC 1 cut(s) 914
AccIII TCCGGA 1 cut(s) 1856
AciI CCGC 1 cut(s) 203
AclWI GGATC 2 cut(s) 65, 1343
AcoI YGGCCR 1 cut(s) 1133
AcsI RAATTY 6 cut(s) 153, 511, 741, 848, 1647, 1897
AcuI CTGAAG 2 cut(s) 1854, 2117
AfaI GTAC 5 cut(s) 569, 1036, 1203, 1326, 1601
AfiI CCNNNNNNNGG 2 cut(s) 1522, 1783
AgeI ACCGGT 1 cut(s) 1349
AhlI ACTAGT 1 cut(s) 487
AjuI GAANNNNNNNTTGG 2 cut(s) 1729, 1761
AluBI AGCT 9 cut(s) 51, 184, 643, 832, 866, 1068, 1803, 2026, 2067
AluI AGCT 9 cut(s) 51, 184, 643, 832, 866, 1068, 1803, 2026, 2067
Alw21I GWGCWC 1 cut(s) 43
Alw26I GTCTC 1 cut(s) 657
AlwI GGATC 2 cut(s) 65, 1343
Ama87I CYCGRG 1 cut(s) 786
Aor13HI TCCGGA 1 cut(s) 1856
AoxI GGCC 3 cut(s) 959, 1133, 1873
ApeKI GCWGC 1 cut(s) 1665
ApoI RAATTY 6 cut(s) 153, 511, 741, 848, 1647, 1897
AsiGI ACCGGT 1 cut(s) 1349
Asp700I GAANNNNTTC 3 cut(s) 245, 1720, 1867
AspS9I GGNCC 4 cut(s) 959, 1374, 1874, 2047
AsuHPI GGTGA 9 cut(s) 316, 347, 485, 715, 1394, 1411, 1457, 1618, 2012
AvaI CYCGRG 1 cut(s) 786
AvaII GGWCC 2 cut(s) 1374, 2047
BaeI ACNNNNGTAYC 2 cut(s) 1414, 1447
BalI TGGCCA 1 cut(s) 1135
BanII GRGCYC 2 cut(s) 383, 1687
BarI GAAGNNNNNNTAC 2 cut(s) 73, 105
BbsI GAAGAC 1 cut(s) 1800
Bbv12I GWGCWC 1 cut(s) 43
BbvI GCAGC 1 cut(s) 1677
BccI CCATC 6 cut(s) 212, 849, 887, 1267, 1785, 1927
BceAI ACGGC 1 cut(s) 157
BciVI GTATCC 1 cut(s) 1442
BclI TGATCA 2 cut(s) 979, 1224
BcoDI GTCTC 1 cut(s) 657
BcuI ACTAGT 1 cut(s) 487
BfaI CTAG 9 cut(s) 425, 488, 497, 578, 713, 738, 1298, 1385, 1436
BfuAI ACCTGC 1 cut(s) 1434
BfuI GTATCC 1 cut(s) 1442
BglII AGATCT 3 cut(s) 427, 499, 1208
BisI GCNGC 1 cut(s) 1666
BlsI GCNGC 1 cut(s) 1667
Bme18I GGWCC 2 cut(s) 1374, 2047
BmeT110I CYCGRG 1 cut(s) 786
BmgT120I GGNCC 4 cut(s) 959, 1374, 1874, 2047
BmiI GGNNCC 3 cut(s) 630, 1684, 1876
BmsI GCATC 1 cut(s) 30
BoxI GACNNNNGTC 1 cut(s) 595
BpiI GAAGAC 1 cut(s) 1800
BpuEI CTTGAG 1 cut(s) 1101
Bsa29I ATCGAT 1 cut(s) 24
BsaJI CCNNGG 5 cut(s) 324, 823, 931, 1441, 2050
BsaWI WCCGGW 4 cut(s) 1175, 1316, 1349, 1856
Bsc4I CCNNNNNNNGG 2 cut(s) 1522, 1783
Bse118I RCCGGY 1 cut(s) 1349
Bse1I ACTGG 2 cut(s) 1405, 2163
BseAI TCCGGA 1 cut(s) 1856
BseCI ATCGAT 1 cut(s) 24
BseDI CCNNGG 5 cut(s) 324, 823, 931, 1441, 2050
BseGI GGATG 4 cut(s) 724, 1059, 1395, 1560
BseLI CCNNNNNNNGG 2 cut(s) 1522, 1783
BseNI ACTGG 2 cut(s) 1405, 2163
BseXI GCAGC 1 cut(s) 1677
BshFI GGCC 3 cut(s) 961, 1135, 1875
BshTI ACCGGT 1 cut(s) 1349
BshVI ATCGAT 1 cut(s) 24
BsiHKAI GWGCWC 1 cut(s) 43
BsiHKCI CYCGRG 1 cut(s) 786
BsiSI CCGG 5 cut(s) 1176, 1317, 1350, 1389, 1857
BslFI GGGAC 4 cut(s) 583, 1477, 1800, 2009
BslI CCNNNNNNNGG 2 cut(s) 1522, 1783
BsmAI GTCTC 1 cut(s) 657
BsmFI GGGAC 4 cut(s) 583, 1477, 1800, 2009
BsmI GAATGC 1 cut(s) 336
BsnI GGCC 3 cut(s) 961, 1135, 1875
BsoBI CYCGRG 1 cut(s) 786
Bsp1286I GDGCHC 3 cut(s) 43, 383, 1687
Bsp13I TCCGGA 1 cut(s) 1856
Bsp19I CCATGG 1 cut(s) 823
BspACI CCGC 1 cut(s) 203
BspANI GGCC 3 cut(s) 961, 1135, 1875
BspDI ATCGAT 1 cut(s) 24
BspEI TCCGGA 1 cut(s) 1856
BspHI TCATGA 2 cut(s) 619, 1227
BspLI GGNNCC 3 cut(s) 630, 1684, 1876
BspMI ACCTGC 1 cut(s) 1434
BspPI GGATC 2 cut(s) 65, 1343
BspQI GCTCTTC 1 cut(s) 1604
BsrFI RCCGGY 1 cut(s) 1349
BsrI ACTGG 2 cut(s) 1405, 2163
BssAI RCCGGY 1 cut(s) 1349
BssECI CCNNGG 5 cut(s) 324, 823, 931, 1441, 2050
BssT1I CCWWGG 5 cut(s) 324, 823, 931, 1441, 2050
Bst4CI ACNGT 3 cut(s) 668, 1169, 2000
Bst6I CTCTTC 2 cut(s) 1218, 1604
BstAPI GCANNNNNTGC 1 cut(s) 108
BstC8I GCNNGC 2 cut(s) 182, 925
BstDSI CCRYGG 1 cut(s) 823
BstF5I GGATG 4 cut(s) 724, 1059, 1395, 1560
BstMAI GTCTC 1 cut(s) 657
BstMWI GCNNNNNNNGC 4 cut(s) 108, 141, 2073, 2082
BstPAI GACNNNNGTC 1 cut(s) 595
BstV1I GCAGC 1 cut(s) 1677
BstV2I GAAGAC 1 cut(s) 1800
BstX2I RGATCY 3 cut(s) 427, 499, 1208
BstXI CCANNNNNNTGG 3 cut(s) 765, 824, 1195
BstYI RGATCY 3 cut(s) 427, 499, 1208
Bsu15I ATCGAT 1 cut(s) 24
BsuI GTATCC 1 cut(s) 1442
BsuRI GGCC 3 cut(s) 961, 1135, 1875
BsuTUI ATCGAT 1 cut(s) 24
BtgI CCRYGG 1 cut(s) 823
BtgZI GCGATG 1 cut(s) 1905
BtsCI GGATG 4 cut(s) 724, 1059, 1395, 1560
BtsIMutI CAGTG 2 cut(s) 1559, 2156
BveI ACCTGC 1 cut(s) 1434
Cac8I GCNNGC 2 cut(s) 182, 925
CciI TCATGA 2 cut(s) 619, 1227
Cfr10I RCCGGY 1 cut(s) 1349
Cfr13I GGNCC 4 cut(s) 959, 1374, 1874, 2047
ClaI ATCGAT 1 cut(s) 24
Csp6I GTAC 5 cut(s) 568, 1035, 1202, 1325, 1600
CspAI ACCGGT 1 cut(s) 1349
CspCI CAANNNNNGTGG 4 cut(s) 1125, 1160, 1714, 1749
CviQI GTAC 5 cut(s) 568, 1035, 1202, 1325, 1600
DraI TTTAAA 1 cut(s) 55
DrdI GACNNNNNNGTC 2 cut(s) 1354, 1822
DseDI GACNNNNNNGTC 2 cut(s) 1354, 1822
EaeI YGGCCR 1 cut(s) 1133
Eam1104I CTCTTC 2 cut(s) 1218, 1604
EarI CTCTTC 2 cut(s) 1218, 1604
Eco130I CCWWGG 5 cut(s) 324, 823, 931, 1441, 2050
Eco24I GRGCYC 2 cut(s) 383, 1687
Eco32I GATATC 1 cut(s) 780
Eco47I GGWCC 2 cut(s) 1374, 2047
Eco57I CTGAAG 2 cut(s) 1854, 2117
Eco88I CYCGRG 1 cut(s) 786
EcoO109I RGGNCCY 1 cut(s) 1874
EcoRI GAATTC 4 cut(s) 153, 511, 1647, 1897
EcoRV GATATC 1 cut(s) 780
EcoT14I CCWWGG 5 cut(s) 324, 823, 931, 1441, 2050
EcoT22I ATGCAT 1 cut(s) 23
EcoT38I GRGCYC 2 cut(s) 383, 1687
ErhI CCWWGG 5 cut(s) 324, 823, 931, 1441, 2050
FalI AAGNNNNNCTT 4 cut(s) 1792, 1824, 1852, 1884
FaqI GGGAC 4 cut(s) 583, 1477, 1800, 2009
FauI CCCGC 1 cut(s) 196
FauNDI CATATG 2 cut(s) 543, 1906
FbaI TGATCA 2 cut(s) 979, 1224
FblI GTMKAC 1 cut(s) 914
Fnu4HI GCNGC 1 cut(s) 1666
FokI GGATG 4 cut(s) 731, 1046, 1382, 1567
FriOI GRGCYC 2 cut(s) 383, 1687
Fsp4HI GCNGC 1 cut(s) 1666
FspBI CTAG 9 cut(s) 425, 488, 497, 578, 713, 738, 1298, 1385, 1436
GluI GCNGC 1 cut(s) 1666
HaeIII GGCC 3 cut(s) 961, 1135, 1875
HapII CCGG 5 cut(s) 1176, 1317, 1350, 1389, 1857
HindIII AAGCTT 5 cut(s) 830, 1066, 1801, 2024, 2065
HinfI GANTC 8 cut(s) 275, 392, 877, 1544, 1702, 1792, 1863, 1915
HpaII CCGG 5 cut(s) 1176, 1317, 1350, 1389, 1857
HphI GGTGA 9 cut(s) 316, 347, 485, 715, 1394, 1411, 1457, 1618, 2012
Hpy166II GTNNAC 4 cut(s) 10, 493, 915, 1202
Hpy188I TCNGA 5 cut(s) 159, 846, 1018, 1473, 1991
Hpy8I GTNNAC 4 cut(s) 10, 493, 915, 1202
HpyAV CCTTC 7 cut(s) 84, 353, 515, 737, 1634, 1878, 2187
HpyCH4III ACNGT 3 cut(s) 668, 1169, 2000
HpyCH4V TGCA 7 cut(s) 21, 135, 180, 258, 437, 1056, 2168
HpyF10VI GCNNNNNNNGC 4 cut(s) 108, 141, 2073, 2082
Kpn2I TCCGGA 1 cut(s) 1856
Ksp22I TGATCA 2 cut(s) 979, 1224
LguI GCTCTTC 1 cut(s) 1604
LmnI GCTCC 2 cut(s) 1682, 2097
Lsp1109I GCAGC 1 cut(s) 1677
LweI GCATC 1 cut(s) 30
MaeI CTAG 9 cut(s) 425, 488, 497, 578, 713, 738, 1298, 1385, 1436
MaeIII GTNAC 4 cut(s) 721, 1445, 1508, 1824
MfeI CAATTG 2 cut(s) 1706, 2163
MflI RGATCY 3 cut(s) 427, 499, 1208
MhlI GDGCHC 3 cut(s) 43, 383, 1687
MlsI TGGCCA 1 cut(s) 1135
MluNI TGGCCA 1 cut(s) 1135
MlyI GAGTC 2 cut(s) 284, 886
MmeI TCCRAC 3 cut(s) 1401, 1654, 1731
Mox20I TGGCCA 1 cut(s) 1135
Mph1103I ATGCAT 1 cut(s) 23
MroI TCCGGA 1 cut(s) 1856
MroXI GAANNNNTTC 3 cut(s) 245, 1720, 1867
MscI TGGCCA 1 cut(s) 1135
MseI TTAA 4 cut(s) 54, 194, 530, 609
Msp20I TGGCCA 1 cut(s) 1135
MspI CCGG 5 cut(s) 1176, 1317, 1350, 1389, 1857
MunI CAATTG 2 cut(s) 1706, 2163
Mva1269I GAATGC 1 cut(s) 336
MwoI GCNNNNNNNGC 4 cut(s) 108, 141, 2073, 2082
NcoI CCATGG 1 cut(s) 823
NdeI CATATG 2 cut(s) 543, 1906
NlaIV GGNNCC 3 cut(s) 630, 1684, 1876
NmuCI GTSAC 4 cut(s) 721, 1445, 1508, 1824
NsiI ATGCAT 1 cut(s) 23
PagI TCATGA 2 cut(s) 619, 1227
PciSI GCTCTTC 1 cut(s) 1604
PctI GAATGC 1 cut(s) 336
PdmI GAANNNNTTC 3 cut(s) 245, 1720, 1867
PfeI GAWTC 6 cut(s) 392, 1544, 1702, 1792, 1863, 1915
PinAI ACCGGT 1 cut(s) 1349
PkrI GCNGC 1 cut(s) 1667
PleI GAGTC 2 cut(s) 283, 885
PpsI GAGTC 2 cut(s) 283, 885
PshAI GACNNNNGTC 1 cut(s) 595
PsiI TTATAA 1 cut(s) 1845
PspN4I GGNNCC 3 cut(s) 630, 1684, 1876
PspPI GGNCC 4 cut(s) 959, 1374, 1874, 2047
PsuI RGATCY 3 cut(s) 427, 499, 1208
RsaI GTAC 5 cut(s) 569, 1036, 1203, 1326, 1601
RsaNI GTAC 5 cut(s) 568, 1035, 1202, 1325, 1600
SapI GCTCTTC 1 cut(s) 1604
SaqAI TTAA 4 cut(s) 54, 194, 530, 609
SatI GCNGC 1 cut(s) 1666
Sau96I GGNCC 4 cut(s) 959, 1374, 1874, 2047
SchI GAGTC 2 cut(s) 284, 886
SduI GDGCHC 3 cut(s) 43, 383, 1687
SfaNI GCATC 1 cut(s) 30
SinI GGWCC 2 cut(s) 1374, 2047
SmlI CTYRAG 1 cut(s) 1116
SmoI CTYRAG 1 cut(s) 1116
SpeI ACTAGT 1 cut(s) 487
SsiI CCGC 1 cut(s) 203
SspI AATATT 3 cut(s) 797, 1143, 1720
SspMI CTAG 9 cut(s) 425, 488, 497, 578, 713, 738, 1298, 1385, 1436
StyI CCWWGG 5 cut(s) 324, 823, 931, 1441, 2050
TaaI ACNGT 3 cut(s) 668, 1169, 2000
TaqI TCGA 6 cut(s) 24, 455, 971, 1366, 1578, 1697
TaqII GACCGA 1 cut(s) 603
TatI WGTACW 2 cut(s) 567, 1599
TfiI GAWTC 6 cut(s) 392, 1544, 1702, 1792, 1863, 1915
Tru1I TTAA 4 cut(s) 54, 194, 530, 609
Tru9I TTAA 4 cut(s) 54, 194, 530, 609
TscAI CASTG 2 cut(s) 1566, 2163
TseFI GTSAC 4 cut(s) 721, 1445, 1508, 1824
TseI GCWGC 1 cut(s) 1665
Tsp45I GTSAC 4 cut(s) 721, 1445, 1508, 1824
TspGWI ACGGA 2 cut(s) 1496, 1538
TspRI CASTG 2 cut(s) 1566, 2163
VpaK11BI GGWCC 2 cut(s) 1374, 2047
XapI RAATTY 6 cut(s) 153, 511, 741, 848, 1647, 1897
XmiI GTMKAC 1 cut(s) 914
XmnI GAANNNNTTC 3 cut(s) 245, 1720, 1867
XspI CTAG 9 cut(s) 425, 488, 497, 578, 713, 738, 1298, 1385, 1436
Zsp2I ATGCAT 1 cut(s) 23
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.