Basic Information

Type: gene

Biological Identity

Species

rosa_chinensis

Chromosome

Orthogroup ID

OG0000048

Physical Location & Seq

Genomic Coordinates Reverse (-)

60678617 .. 60681573

Gene Structure 2957 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

PRQ51311

Sequence Viewer

CDS Protein Promoter (2k)

Length: 2901 bp

ATGGGACACAGTACTGCATCGTTCTTGCTTCTTTCACTTTTACTACTGTCAGGAACCTCATACCTTGACACAGTCACACTTGGTTTCTGCAGTGCAGATGCTAATGTGGGTTGTATGGATATCGAGAGGAAAGCCCTTCTGAAGCTCAGAGAGGGACTCACTGATCCTTCAGACCGGCTTTCATCTTGGGTTGGAGTAGATTGCTGCAAATGGAGAGGTATAGGCTGCAACAAGACAACTGGACGCGTGGACAGCCTTAATCTTCGCAACCCGTATGTAGATGTTTCGGAGAGTGATGATGGAACACTCCCTGCTTTAGGAGGTGAGATCAATCCTTCATTGCTTGTTTTGAAAGATTTGGTTTACTTGGATTTGAGCATGAATAACTTTGGAGGTCTAGAACTTCCAAGTTTCATTGGATCACTAGAAAAAATAACATATCTCAATCTATCTGGTGCATCATTTGGTGGAGTAATTCCCGCCAATCTTGGAAACCTTTCAAAATTGCTTCATCTTATCTCATTTCTTAACTTGGGAGGAGCAAACCTTACCAAGGCTGCACCATATTGGCTTCCCACTGTTAATATGCTCCCTTCACTTCTTGAATTGCATTTGCCTGGCTGTGGACTTTCCATCCTTCCACCTTCTCTTCATCATATCAATTTCACATCACTTTTGGTTCTTGACCTCTCTGCCAATGGTTTCAACTCCACACTTTCTCCCTGGTTGTTCAATCTGACTGAACTAGTCAACCTTGACCTAAGTCGGAACAATCTCAATGGAGAACTTCCAGAAACACTCGGGAGTTTGACTCATCTGAAGAACCTTGATTTGTCAGAGAATTCAGACATCAGAGGTCAGTTGCCAAGAAACTTGGGAATTCTATGCGATTTGCAATCTCTTAAACTTTCAATCAACAAAGTTACTGGTGAGATAACTGAGTTCATTGATAGTTTGTCTATATGCACAAACAGCAGCTTAGAGAGGTTGGATTTAGGTTATAACAGTCTGACAGGAAATTTGCCTAATTCATTGGGACTTCTTAAGAAGTTAAGATACCTCACGTTGTGGTCCAACTCATTTCAGGGTTCTATCCCAGAATCTATTGGAAACTTGACATCTTTGGAGGAATTTTACCTTGCAAGAAATAAACTGGGTGGAGTCATCCCAGAAAGTTTTGGGCAGCTCTCATCACTCGTTGCAGTAGATCTATCTGAAAACACATGGGAAGGTGTTGTAACAGAAGCTCATTTTCTGAAACTTCGAAGCTTAAAAGACGTGTCAATCCAGAAAGCCTCCCCAAACATTTCCCTAATTTTCAACATTAGTTCTAATTGGATACCTCCTTTCAAATTGAGATTCTTGAACCTTAGATCATGTCAACTGGGTCCCAAATTTCCTGCATGGCTTCGAAATCAGACTGAGCTTGTCACGGTGGTCCTCAATAATGCTAAGATTGCAGATACCATACCAGATTGGTTTTGGCAGTTAGATTTGTTATTGGATGAACTAGATGTTGCTTACAATTATCAACTAGGCGGCAAGGTGCCTAACTCGCTAAGGTTCAGCTACCCTGCTACTGTTGATTTGAGTTCAAACCTGTTTGAGGGCCCCCTCCCACTTTGGTCAAGAAACCTTACATCGCTGGACCTCAGGGATAATTTCTTTTCAGGGCCAATTCCTTCGAACATTGGTGATGTGATGCCCTCCTTGTCAGATTTAGACATCTCTAGGAATGGTTTGAGTGGAAGCATTCCCCTGTCTTTAGGTAATCTAAGCCTACTGACAACCATGGTTCTCTCAAATAATTACTTGTCTGGTGAAATTCCTCATTTCTGGAACAATTTACCATTCTTGTATATTGTAGATATGTCAAACAACAGCCTCTCTGGTACAATTCCAATATCCATGGATTCTCTTGATTCACTCTTGTACTTGATTCTCTCTAGTAACAACTTGTCAGGCAAACTTCCTTCATTGAGAAACTGTACTGGCATGAAGAGTCTTGATCTTGGGGAAAATAAGTTCTTTGGAAACATTCCAGCGTGGATAGGAGAAAGCATGCTCTCTTTGTTGATTTTACGCTTGAGTTCCAACTCATTCACCGGAAGCATTCCTTCACAGTTGTGTGGCCTTTCCAATCTTCACATATTGGACCTCTCACACAATAACCTGTCTGGTCATATTCCCCGCTGTGTTGGTAACTTGAGTGGCTTGAAAACATCTGTATTCTCAGATAAAGATACCTCATACCTTTACCAGGGAAAGTTGAAGGTGGTGGCAAAAGGAAGAGTGCAAGACTTCGATCCCACTCTCTATCTTGTTAATAGCCTAGATCTCTCAAACAATAACTTATCAGGTGAGATGCCGAGGGAGCTCACGAGCCTGATAAAGTTGTGGACCTTGAATTTATCCATGAATCATCTGACAGGAGTAATGCCATCAAGGATTGGGAGCATGGAGTCGCTAGAAACTCTTGATTTGTCAGTAAACCAGCTTTCAGGTTCCATTCCACAGAGTATGGTTTCATTGACATTCTTGAATCATCTAAACCTCTCATACAACAACTTGTCTGGGACAATCCCAACAGGCAACCAGTTTAACAGCCTGGTTGATCCATCAATATATGAAGGCAATGCCGCTCTTTGTGGTTATCCGTTGCGTGATTGCCAAGTCAATGGCGGAATTCCTCAGGGTCCAAGTCATGAAGGTGGAGAAGACACTGGCTTTAAAATGTGGGGTTTCATCATCAGCATGGTGATCGGTTTCGTTATGGGGTTCTGGGGAGTTTGTGGGAGTTTGATCATCAGCAAGTCTTGGAGGAAGACATATTTCCACTTCACTGACAGAATGATTGTTGCTTGTATACGGAAATATCGGGGGCACAGGAAATTTAAGTAG

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0000003 GO:0001704 GO:0001706 GO:0003006 GO:0005575 GO:0005618 GO:0005623 GO:0005886 GO:0006810 GO:0006833 GO:0006950 GO:0007275 GO:0007369 GO:0007389 GO:0007492 GO:0008104 GO:0008150 GO:0009505 GO:0009531 GO:0009611 GO:0009653 GO:0009790 GO:0009791 GO:0009793 GO:0009798 GO:0009888 GO:0009987 GO:0010154 GO:0010453 GO:0010470 GO:0016020 GO:0022414 GO:0022603 GO:0030104 GO:0030154 GO:0030312 GO:0032501 GO:0032502 GO:0033036 GO:0035987 GO:0042044 GO:0042592 GO:0042659 GO:0044426 GO:0044462 GO:0044464 GO:0045184 GO:0045595 GO:0045995 GO:0048226 GO:0048316 GO:0048598 GO:0048608 GO:0048646 GO:0048731 GO:0048856 GO:0048869 GO:0048878 GO:0050789 GO:0050793 GO:0050794 GO:0050801 GO:0050896 GO:0051179 GO:0051234 GO:0051239 GO:0051302 GO:0055065 GO:0055067 GO:0055075 GO:0055080 GO:0061458 GO:0065001 GO:0065007 GO:0065008 GO:0071944 GO:0090558 GO:0090708 GO:0098771 GO:0099402 GO:1903224 GO:1905392 GO:1905421 GO:2000026 GO:2000067 GO:2000280

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

LRRNT_2 LRR_1 LRR_6 LRR_8

Protein Analysis

966

Amino Acids

105.79

Weight (kDa)

5.72

Isoelectric Point (pI)

30.88

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
LRRNT_2	PF08263	42 - 77	5.4e-11	Leucine rich repeat N-terminal domain
LRR_14	PF23598	191 - 312	9.6e-06	Leucine-rich repeat region
LRR_14	PF23598	326 - 474	1.5e-11	Leucine-rich repeat region
LRR_8	PF13855	350 - 407	1.5e-08	Leucine rich repeat
LRR_8	PF13855	666 - 725	3e-06	Leucine rich repeat
LRR_8	PF13855	799 - 857	1.7e-07	Leucine rich repeat

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

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Publication-ready

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Orthologous Genes (Group: OG0000048)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT2G34930
fragaria_vesca	FvH4_3g12670 FvH4_3g12672 FvH4_3g12740 FvH4_3g12742 FvH4_3g12770 FvH4_3g12770 FvH4_3g12860 FvH4_3g12890 FvH4_3g13431 FvH4_3g13433 FvH4_3g13435 FvH4_3g13470 FvH4_3g13470 FvH4_3g13480 FvH4_3g13562 FvH4_3g13580 FvH4_3g13600 FvH4_3g13600 FvH4_3g13600 FvH4_3g13600 FvH4_3g13600 FvH4_3g13600 FvH4_3g13610 FvH4_3g13620 FvH4_3g13620 FvH4_3g23240 FvH4_3g32910 FvH4_3g35070 FvH4_3g45520 FvH4_5g08430 FvH4_5g08450 FvH4_6g53230 FvH4_6g53300
malus_domestica	MD05G1217600.v1.1 MD05G1217700.v1.1 MD05G1224700.v1.1 MD05G1225100.v1.1 MD05G1225300.v1.1 MD05G1225400.v1.1 MD05G1235900.v1.1 MD05G1236100.v1.1 MD05G1236300.v1.1 MD05G1237200.v1.1 MD05G1241600.v1.1 MD05G1245700.v1.1 MD05G1245800.v1.1 MD05G1245900.v1.1 MD05G1246000.v1.1 MD05G1246100.v1.1 MD05G1246300.v1.1 MD05G1246400.v1.1 MD05G1246500.v1.1 MD05G1248100.v1.1 MD05G1248200.v1.1 MD05G1264300.v1.1 MD05G1275900.v1.1 MD07G1051400.v1.1 MD09G1012600.v1.1 MD09G1012700.v1.1 MD09G1012800.v1.1 MD10G1221400.v1.1 MD10G1221500.v1.1 MD10G1221600.v1.1 MD10G1221900.v1.1 MD10G1222200.v1.1 MD10G1222400.v1.1 MD10G1222500.v1.1 MD10G1222900.v1.1 MD10G1223000.v1.1 MD10G1223100.v1.1 MD10G1223500.v1.1 MD10G1228000.v1.1 MD12G1019600.v1.1 MD12G1020000.v1.1 MD12G1020100.v1.1 MD17G1013200.v1.1 MD17G1013300.v1.1 MD17G1013400.v1.1
prunus_persica	Prupe.1G060500_v2.0.a1 Prupe.1G100100_v2.0.a1 Prupe.3G124000_v2.0.a1 Prupe.3G304400_v2.0.a1 Prupe.4G116800_v2.0.a1 Prupe.4G116900_v2.0.a1 Prupe.4G117000_v2.0.a1 Prupe.4G121800_v2.0.a1 Prupe.4G121900_v2.0.a1 Prupe.4G122000_v2.0.a1 Prupe.4G122100_v2.0.a1 Prupe.4G122200_v2.0.a1 Prupe.4G122300_v2.0.a1 Prupe.4G122500_v2.0.a1 Prupe.4G122600_v2.0.a1 Prupe.4G122800_v2.0.a1 Prupe.4G122900_v2.0.a1 Prupe.4G123000_v2.0.a1 Prupe.4G123100_v2.0.a1 Prupe.4G123200_v2.0.a1 Prupe.4G131500_v2.0.a1 Prupe.4G131600_v2.0.a1 Prupe.7G032500_v2.0.a1 Prupe.7G032900_v2.0.a1 Prupe.7G033000_v2.0.a1 Prupe.7G033100_v2.0.a1 Prupe.7G033300_v2.0.a1 Prupe.7G033600_v2.0.a1 Prupe.7G034600_v2.0.a1 Prupe.7G040200_v2.0.a1 Prupe.7G059200_v2.0.a1
pyrus_communis	pycom05g20580 pycom05g20590 pycom05g20760 pycom05g20800 pycom05g21280 pycom05g21290 pycom05g21820 pycom05g21830 pycom05g22180 pycom05g22190 pycom05g22210 pycom05g22450 pycom05g22460 pycom05g22470 pycom05g22480 pycom05g22490 pycom05g23770 pycom05g23780 pycom05g24050 pycom05g24060 pycom07g03910 pycom10g18700 pycom10g18720 pycom10g18730 pycom10g18740 pycom10g19150 pycom111g01060 pycom12g01660 pycom12g01690 pycom12g01720 pycom12g01740 pycom12g01750 pycom12g01770 pycom12g01810 pycom12g01820 pycom12g01830 pycom12g01840 pycom12g01870 pycom12g01900 pycom17g01060 pycom17g01070
rosa_chinensis	RchiOBHm_Chr1g0315041 RchiOBHm_Chr1g0315051 RchiOBHm_Chr1g0315071 RchiOBHm_Chr1g0315161 RchiOBHm_Chr1g0315211 RchiOBHm_Chr1g0315251 RchiOBHm_Chr1g0315321 RchiOBHm_Chr1g0315391 RchiOBHm_Chr1g0315451 RchiOBHm_Chr1g0315481 RchiOBHm_Chr1g0315551 RchiOBHm_Chr1g0315601 RchiOBHm_Chr1g0315621 RchiOBHm_Chr1g0359221 RchiOBHm_Chr2g0142981 RchiOBHm_Chr2g0143001 RchiOBHm_Chr2g0143061 RchiOBHm_Chr2g0143091 RchiOBHm_Chr2g0175321 RchiOBHm_Chr2g0175341 RchiOBHm_Chr2g0175361 RchiOBHm_Chr2g0175371 RchiOBHm_Chr3g0470491 RchiOBHm_Chr3g0480881 RchiOBHm_Chr3g0485511 RchiOBHm_Chr5g0020741 RchiOBHm_Chr5g0020901 RchiOBHm_Chr5g0020931 RchiOBHm_Chr5g0020941 RchiOBHm_Chr5g0020961 RchiOBHm_Chr5g0020971 RchiOBHm_Chr5g0021451 RchiOBHm_Chr5g0021531 RchiOBHm_Chr5g0021831 RchiOBHm_Chr5g0021841 RchiOBHm_Chr5g0021931 RchiOBHm_Chr5g0021941 RchiOBHm_Chr5g0021981 RchiOBHm_Chr5g0021991 RchiOBHm_Chr5g0022011 RchiOBHm_Chr5g0022181 RchiOBHm_Chr5g0022191 RchiOBHm_Chr5g0022211 RchiOBHm_Chr5g0022221 RchiOBHm_Chr5g0022231 RchiOBHm_Chr5g0022291 RchiOBHm_Chr5g0022301 RchiOBHm_Chr5g0022331 RchiOBHm_Chr5g0022361 RchiOBHm_Chr5g0022371 RchiOBHm_Chr5g0022381 RchiOBHm_Chr5g0022401 RchiOBHm_Chr5g0022431 RchiOBHm_Chr5g0022451 RchiOBHm_Chr5g0022541 RchiOBHm_Chr5g0022591 RchiOBHm_Chr5g0022601 RchiOBHm_Chr5g0022701 RchiOBHm_Chr5g0022741 RchiOBHm_Chr5g0022791 RchiOBHm_Chr5g0022811 RchiOBHm_Chr5g0022851 RchiOBHm_Chr5g0029441 RchiOBHm_Chr5g0041631 RchiOBHm_Chr5g0069391 RchiOBHm_Chr6g0273811 RchiOBHm_Chr6g0273831 RchiOBHm_Chr6g0275331 RchiOBHm_Chr7g0219061
rosa_laevigata	RLG00000002463 RLG00000020007 RLG00000020008 RLG00000022320 RLG00000022321 RLG00000023446 RLG00000030742 RLG00000030743 RLG00000030747 RLG00000032557 RLG00000032564 RLG00000032571 RLG00000032573 RLG00000032574 RLG00000032612 RLG00000032633 RLG00000032636 RLG00000032638 RLG00000032650 RLG00000032651 RLG00000032652 RLG00000032653 RLG00000032655 RLG00000032673 RLG00000032678 RLG00000032769 RLG00000032857 RLG00000033168 RLG00000033465 RLG00000034086 RLG00000034222 RLG00000035290
rosa_multiflora	Rmu_co8143358.1_g000001 Rmu_co8518791.1_g000001 Rmu_sc0000178.1_g000008 Rmu_sc0000178.1_g000014 Rmu_sc0000401.1_g000005 Rmu_sc0000401.1_g000013 Rmu_sc0000401.1_g000017 Rmu_sc0000401.1_g000018 Rmu_sc0000401.1_g000024 Rmu_sc0000401.1_g000025 Rmu_sc0000576.1_g000020 Rmu_sc0001585.1_g000003 Rmu_sc0001585.1_g000005 Rmu_sc0001585.1_g000008 Rmu_sc0001784.1_g000006 Rmu_sc0001784.1_g000011 Rmu_sc0001784.1_g000022 Rmu_sc0001784.1_g000028 Rmu_sc0002052.1_g000004 Rmu_sc0002052.1_g000011 Rmu_sc0002277.1_g000003 Rmu_sc0002277.1_g000006 Rmu_sc0002277.1_g000024 Rmu_sc0002658.1_g000012 Rmu_sc0003512.1_g000004 Rmu_sc0003512.1_g000007 Rmu_sc0004180.1_g000016 Rmu_sc0004180.1_g000029 Rmu_sc0004180.1_g000034 Rmu_sc0005639.1_g000008 Rmu_sc0005639.1_g000023 Rmu_sc0006070.1_g000016 Rmu_sc0006070.1_g000017 Rmu_sc0006966.1_g000021 Rmu_sc0006966.1_g000023 Rmu_sc0007239.1_g000003 Rmu_sc0008460.1_g000010 Rmu_sc0009984.1_g000008 Rmu_sc0010181.1_g000005 Rmu_sc0010181.1_g000010 Rmu_sc0010503.1_g000006 Rmu_sc0011646.1_g000003 Rmu_sc0012984.1_g000011 Rmu_sc0016972.1_g000005 Rmu_sc0016972.1_g000008 Rmu_sc0023070.1_g000003 Rmu_sc0025660.1_g000001 Rmu_ssc0000322.1_g000019
rosa_roxburghii	Rroxscaffold_1G00038860 Rroxscaffold_1G00053490 Rroxscaffold_1G00053500 Rroxscaffold_1G00054230 Rroxscaffold_1G00056460 Rroxscaffold_1G00056470 Rroxscaffold_1G00056480 Rroxscaffold_1G00056500 Rroxscaffold_1G00056510 Rroxscaffold_1G00056620 Rroxscaffold_1G00056690 Rroxscaffold_1G00056710 Rroxscaffold_1G00056720 Rroxscaffold_1G00056730 Rroxscaffold_1G00056740 Rroxscaffold_1G00056750 Rroxscaffold_1G00056760 Rroxscaffold_1G00056870 Rroxscaffold_1G00056900 Rroxscaffold_1G00057120 Rroxscaffold_1G00057560 Rroxscaffold_2G00077430 Rroxscaffold_2G00102160 Rroxscaffold_3G00231420 Rroxscaffold_3G00231430 Rroxscaffold_4G00297230 Rroxscaffold_4G00331570 Rroxscaffold_6G00396700 Rroxscaffold_6G00400940 Rroxscaffold_7G00192740
rosa_rugosa	Rorug01G0004400 Rorug01G0004500 Rorug02G0377600 Rorug02G0378000 Rorug02G0582800 Rorug02G0583400 Rorug03G0187000 Rorug03G0218800 Rorug04G0081200 Rorug05G0062700 Rorug05G0062700 Rorug05G0063100 Rorug05G0063200 Rorug05G0063200 Rorug05G0063200 Rorug05G0067000 Rorug05G0069700 Rorug05G0069900 Rorug05G0070000 Rorug05G0070100 Rorug05G0070300 Rorug05G0070400 Rorug05G0070600 Rorug05G0070600 Rorug05G0072300 Rorug05G0072400 Rorug05G0072500 Rorug05G0072500 Rorug05G0072600.1 Rorug05G0072700 Rorug05G0072800 Rorug05G0072800 Rorug05G0072900 Rorug05G0073000 Rorug05G0073000 Rorug05G0073400 Rorug05G0073400 Rorug05G0073400 Rorug05G0074800 Rorug05G0075000 Rorug05G0114300 Rorug05G0194200 Rorug06G0097800
rosa_samantha	Rh2AG401400 Rh2CG387600 Rh2CG417000 Rh2CG637400 Rh5CG169600 Rh5CG172100 Rh5CG175200 Rh5CG317100 Rh6DG187900
rosa_wichuraiana	Rw1G000750 Rw1G000790 Rw1G000820 Rw1G000860 Rw1G000880 Rw1G000910 Rw2G035180 Rw2G035200 Rw2G035240 Rw2G054370 Rw2G054380 Rw5G013570 Rw5G013580 Rw5G013590 Rw5G013910 Rw5G013980 Rw5G014110 Rw5G014120 Rw5G014280 Rw5G014310 Rw5G014400 Rw5G014420 Rw5G014440 Rw5G014460 Rw5G014480 Rw5G014500 Rw5G014520 Rw5G014530 Rw5G042390

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AanI	TTATAA	1 cut(s)	1002
AccB1I	GGYRCC	1 cut(s)	1546
AccBSI	CCGCTC	1 cut(s)	2642
AccI	GTMKAC	1 cut(s)	2866
AccII	CGCG	1 cut(s)	246
AciI	CCGC	5 cut(s)	480, 1539, 2191, 2640, 2682
AclWI	GGATC	4 cut(s)	158, 427, 2300, 2609
AcsI	RAATTY	9 cut(s)	841, 879, 1018, 1130, 1394, 1824, 2407, 2685, 2891
AcuI	CTGAAG	3 cut(s)	153, 161, 839
AdeI	CACNNNGTG	1 cut(s)	1068
AfaI	GTAC	4 cut(s)	13, 1894, 1934, 1990
AfiI	CCNNNNNNNGG	5 cut(s)	317, 553, 623, 1606, 2260
AflII	CTTAAG	1 cut(s)	1043
AflIII	ACRYGT	2 cut(s)	244, 1278
AhlI	ACTAGT	1 cut(s)	745
AjiI	CACGTC	1 cut(s)	1279
AjnI	CCWGG	4 cut(s)	616, 722, 2259, 2607
AleI	CACNNNNGTG	1 cut(s)	2125
AloI	GAACNNNNNNTCC	2 cut(s)	2009, 2041
AluBI	AGCT	9 cut(s)	145, 978, 1186, 1247, 1269, 1426, 1569, 2377, 2497
AluI	AGCT	9 cut(s)	145, 978, 1186, 1247, 1269, 1426, 1569, 2377, 2497
Alw21I	GWGCWC	1 cut(s)	2379
AlwI	GGATC	4 cut(s)	158, 427, 2300, 2609
Ama87I	CYCGRG	1 cut(s)	800
AoxI	GGCC	3 cut(s)	1609, 1673, 2131
ApaI	GGGCCC	1 cut(s)	1613
ApeKI	GCWGC	5 cut(s)	204, 225, 557, 975, 1183
ApoI	RAATTY	9 cut(s)	841, 879, 1018, 1130, 1394, 1824, 2407, 2685, 2891
ArsI	GACNNNNNNTTYG	2 cut(s)	1003, 1035
Asp700I	GAANNNNTTC	1 cut(s)	496
AsuHPI	GGTGA	7 cut(s)	335, 941, 1706, 1832, 2095, 2372, 2770
AsuII	TTCGAA	3 cut(s)	1264, 1411, 1685
AvaI	CYCGRG	1 cut(s)	800
AvaII	GGWCC	7 cut(s)	1071, 1388, 1438, 1648, 2155, 2400, 2696
AxyI	CCTNAGG	2 cut(s)	1652, 2691
BaeGI	GKGCMC	2 cut(s)	1613, 2886
BanI	GGYRCC	1 cut(s)	1546
BanII	GRGCYC	2 cut(s)	1613, 2379
BarI	GAAGNNNNNNTAC	2 cut(s)	1040, 1072
BauI	CACGAG	1 cut(s)	2380
BbsI	GAAGAC	2 cut(s)	2724, 2831
Bbv12I	GWGCWC	1 cut(s)	2379
BbvI	GCAGC	5 cut(s)	191, 212, 544, 987, 1195
BccI	CCATC	4 cut(s)	293, 641, 2449, 2626
BcgI	CGANNNNNNTGC	2 cut(s)	2743, 2777
BciT130I	CCWGG	4 cut(s)	618, 724, 2261, 2609
BciVI	GTATCC	1 cut(s)	1332
BclI	TGATCA	1 cut(s)	2802
BcuI	ACTAGT	1 cut(s)	745
BfaI	CTAG	9 cut(s)	398, 425, 746, 1511, 1535, 1731, 1947, 2333, 2468
BfmI	CTRYAG	1 cut(s)	88
BfrI	CTTAAG	1 cut(s)	1043
BfuI	GTATCC	1 cut(s)	1332
BglII	AGATCT	2 cut(s)	1207, 2335
BisI	GCNGC	7 cut(s)	205, 226, 558, 976, 1184, 1540, 2640
BlsI	GCNGC	7 cut(s)	206, 227, 559, 977, 1185, 1541, 2641
BmcAI	AGTACT	1 cut(s)	13
Bme1390I	CCNGG	4 cut(s)	618, 724, 2261, 2609
Bme18I	GGWCC	7 cut(s)	1071, 1388, 1438, 1648, 2155, 2400, 2696
BmeT110I	CYCGRG	1 cut(s)	800
BmgBI	CACGTC	1 cut(s)	1279
BmiI	GGNNCC	8 cut(s)	55, 1389, 1390, 1548, 1611, 1612, 2506, 2697
BmrFI	CCNGG	4 cut(s)	618, 724, 2261, 2609
BmrI	ACTGGG	2 cut(s)	1163, 1394
BmsI	GCATC	5 cut(s)	26, 88, 467, 1692, 2355
BmuI	ACTGGG	2 cut(s)	1163, 1394
BoxI	GACNNNNGTC	1 cut(s)	762
BpiI	GAAGAC	2 cut(s)	2724, 2831
BplI	GAGNNNNNCTC	4 cut(s)	141, 173, 796, 828
Bpu10I	CCTNAGC	1 cut(s)	1559
Bpu14I	TTCGAA	3 cut(s)	1264, 1411, 1685
BpuEI	CTTGAG	2 cut(s)	2107, 2227
BsaJI	CCNNGG	6 cut(s)	552, 722, 1791, 1908, 2260, 2369
BsaWI	WCCGGW	1 cut(s)	2105
BsaXI	ACNNNNNCTCC	2 cut(s)	703, 733
Bsc4I	CCNNNNNNNGG	5 cut(s)	317, 553, 623, 1606, 2260
Bse118I	RCCGGY	1 cut(s)	174
Bse1I	ACTGG	7 cut(s)	244, 931, 1158, 1389, 1996, 2596, 2728
Bse21I	CCTNAGG	2 cut(s)	1652, 2691
Bse3DI	GCAATG	2 cut(s)	338, 2641
BseBI	CCWGG	4 cut(s)	618, 724, 2261, 2609
BseDI	CCNNGG	6 cut(s)	552, 722, 1791, 1908, 2260, 2369
BseGI	GGATG	3 cut(s)	633, 1164, 1510
BseLI	CCNNNNNNNGG	5 cut(s)	317, 553, 623, 1606, 2260
BseMI	GCAATG	2 cut(s)	338, 2641
BseMII	CTCAG	6 cut(s)	160, 930, 1413, 1666, 2247, 2705
BseNI	ACTGG	7 cut(s)	244, 931, 1158, 1389, 1996, 2596, 2728
BseRI	GAGGAG	1 cut(s)	552
BseSI	GKGCMC	2 cut(s)	1613, 2886
BseXI	GCAGC	5 cut(s)	191, 212, 544, 987, 1195
BsgI	GTGCAG	2 cut(s)	114, 543
Bsh1236I	CGCG	1 cut(s)	246
BshFI	GGCC	3 cut(s)	1611, 1675, 2133
BshNI	GGYRCC	1 cut(s)	1546
BsiHKAI	GWGCWC	1 cut(s)	2379
BsiHKCI	CYCGRG	1 cut(s)	800
BsiSI	CCGG	2 cut(s)	175, 2106
BslFI	GGGAC	5 cut(s)	18, 168, 1050, 1374, 2590
BslI	CCNNNNNNNGG	5 cut(s)	317, 553, 623, 1606, 2260
BsmFI	GGGAC	5 cut(s)	18, 168, 1050, 1374, 2590
BsmI	GAATGC	2 cut(s)	1752, 2112
BsnI	GGCC	3 cut(s)	1611, 1675, 2133
BsoBI	CYCGRG	1 cut(s)	800
Bsp119I	TTCGAA	3 cut(s)	1264, 1411, 1685
Bsp120I	GGGCCC	1 cut(s)	1609
Bsp1286I	GDGCHC	3 cut(s)	1613, 2379, 2886
Bsp19I	CCATGG	2 cut(s)	1791, 1908
BspACI	CCGC	5 cut(s)	480, 1539, 2191, 2640, 2682
BspANI	GGCC	3 cut(s)	1611, 1675, 2133
BspCNI	CTCAG	6 cut(s)	159, 931, 1414, 1665, 2246, 2704
BspFNI	CGCG	1 cut(s)	246
BspHI	TCATGA	1 cut(s)	2704
BspLI	GGNNCC	8 cut(s)	55, 1389, 1390, 1548, 1611, 1612, 2506, 2697
BspMAI	CTGCAG	1 cut(s)	92
BspPI	GGATC	4 cut(s)	158, 427, 2300, 2609
BspT104I	TTCGAA	3 cut(s)	1264, 1411, 1685
BspT107I	GGYRCC	1 cut(s)	1546
BspTI	CTTAAG	1 cut(s)	1043
BsrBI	CCGCTC	1 cut(s)	2642
BsrDI	GCAATG	2 cut(s)	338, 2641
BsrFI	RCCGGY	1 cut(s)	174
BsrI	ACTGG	7 cut(s)	244, 931, 1158, 1389, 1996, 2596, 2728
BssAI	RCCGGY	1 cut(s)	174
BssECI	CCNNGG	6 cut(s)	552, 722, 1791, 1908, 2260, 2369
BssNAI	GTATAC	1 cut(s)	2867
BssSI	CACGAG	1 cut(s)	2380
BssT1I	CCWWGG	3 cut(s)	552, 1791, 1908
Bst1107I	GTATAC	1 cut(s)	2867
Bst2BI	CACGAG	1 cut(s)	2380
Bst2UI	CCWGG	4 cut(s)	618, 724, 2261, 2609
Bst4CI	ACNGT	9 cut(s)	11, 48, 73, 580, 1007, 1435, 1582, 1988, 2124
Bst6I	CTCTTC	3 cut(s)	654, 1994, 2284
BstAFI	CTTAAG	1 cut(s)	1043
BstBI	TTCGAA	3 cut(s)	1264, 1411, 1685
BstC8I	GCNNGC	1 cut(s)	2063
BstDSI	CCRYGG	2 cut(s)	1791, 1908
BstENI	CCTNNNNNAGG	4 cut(s)	315, 551, 1604, 2258
BstF5I	GGATG	3 cut(s)	633, 1164, 1510
BstFNI	CGCG	1 cut(s)	246
BstMWI	GCNNNNNNNGC	5 cut(s)	252, 972, 1457, 1555, 2374
BstNI	CCWGG	4 cut(s)	618, 724, 2261, 2609
BstNSI	RCATGY	1 cut(s)	2065
BstPAI	GACNNNNGTC	1 cut(s)	762
BstSCI	CCNGG	4 cut(s)	616, 722, 2259, 2607
BstSFI	CTRYAG	1 cut(s)	88
BstSLI	GKGCMC	2 cut(s)	1613, 2886
BstUI	CGCG	1 cut(s)	246
BstV1I	GCAGC	5 cut(s)	191, 212, 544, 987, 1195
BstV2I	GAAGAC	2 cut(s)	2724, 2831
BstX2I	RGATCY	2 cut(s)	1207, 2335
BstXI	CCANNNNNNTGG	1 cut(s)	2678
BstYI	RGATCY	2 cut(s)	1207, 2335
BstZ17I	GTATAC	1 cut(s)	2867
Bsu36I	CCTNAGG	2 cut(s)	1652, 2691
BsuI	GTATCC	1 cut(s)	1332
BsuRI	GGCC	3 cut(s)	1611, 1675, 2133
BtgI	CCRYGG	2 cut(s)	1791, 1908
BtgZI	GCGATG	1 cut(s)	1626
BtrI	CACGTC	1 cut(s)	1279
BtsCI	GGATG	3 cut(s)	633, 1164, 1510
BtsI	GCAGTG	1 cut(s)	97
BtsIMutI	CAGTG	5 cut(s)	97, 159, 576, 2721, 2841
Cac8I	GCNNGC	1 cut(s)	2063
CciI	TCATGA	1 cut(s)	2704
Cfr10I	RCCGGY	1 cut(s)	174
CseI	GACGC	1 cut(s)	252
Csp6I	GTAC	4 cut(s)	12, 1893, 1933, 1989
CviQI	GTAC	4 cut(s)	12, 1893, 1933, 1989
DraI	TTTAAA	1 cut(s)	2731
DraIII	CACNNNGTG	1 cut(s)	1068
Eam1104I	CTCTTC	3 cut(s)	654, 1994, 2284
EarI	CTCTTC	3 cut(s)	654, 1994, 2284
EciI	GGCGGA	1 cut(s)	2697
Ecl136II	GAGCTC	1 cut(s)	2377
Eco130I	CCWWGG	3 cut(s)	552, 1791, 1908
Eco24I	GRGCYC	2 cut(s)	1613, 2379
Eco32I	GATATC	1 cut(s)	121
Eco47I	GGWCC	7 cut(s)	1071, 1388, 1438, 1648, 2155, 2400, 2696
Eco53kI	GAGCTC	1 cut(s)	2377
Eco57I	CTGAAG	3 cut(s)	153, 161, 839
Eco81I	CCTNAGG	2 cut(s)	1652, 2691
Eco88I	CYCGRG	1 cut(s)	800
EcoICRI	GAGCTC	1 cut(s)	2377
EcoNI	CCTNNNNNAGG	4 cut(s)	315, 551, 1604, 2258
EcoO109I	RGGNCCY	3 cut(s)	1388, 1609, 1610
EcoRI	GAATTC	3 cut(s)	841, 879, 2685
EcoRII	CCWGG	4 cut(s)	616, 722, 2259, 2607
EcoRV	GATATC	1 cut(s)	121
EcoT14I	CCWWGG	3 cut(s)	552, 1791, 1908
EcoT38I	GRGCYC	2 cut(s)	1613, 2379
ErhI	CCWWGG	3 cut(s)	552, 1791, 1908
FalI	AAGNNNNNCTT	2 cut(s)	2101, 2133
FaqI	GGGAC	5 cut(s)	18, 168, 1050, 1374, 2590
FauI	CCCGC	2 cut(s)	487, 2198
FbaI	TGATCA	1 cut(s)	2802
FblI	GTMKAC	1 cut(s)	2866
Fnu4HI	GCNGC	7 cut(s)	205, 226, 558, 976, 1184, 1540, 2640
FokI	GGATG	3 cut(s)	620, 1151, 1517
FriOI	GRGCYC	2 cut(s)	1613, 2379
Fsp4HI	GCNGC	7 cut(s)	205, 226, 558, 976, 1184, 1540, 2640
FspBI	CTAG	9 cut(s)	398, 425, 746, 1511, 1535, 1731, 1947, 2333, 2468
GluI	GCNGC	7 cut(s)	205, 226, 558, 976, 1184, 1540, 2640
HaeIII	GGCC	3 cut(s)	1611, 1675, 2133
HapII	CCGG	2 cut(s)	175, 2106
HgaI	GACGC	1 cut(s)	252
HincII	GTYRAC	2 cut(s)	751, 1382
HindII	GTYRAC	2 cut(s)	751, 1382
HindIII	AAGCTT	1 cut(s)	1267
HpaII	CCGG	2 cut(s)	175, 2106
HphI	GGTGA	7 cut(s)	335, 941, 1706, 1832, 2095, 2372, 2770
Hpy166II	GTNNAC	8 cut(s)	250, 364, 626, 751, 1382, 2400, 2491, 2867
Hpy8I	GTNNAC	8 cut(s)	250, 364, 626, 751, 1382, 2400, 2491, 2867
HpyCH4III	ACNGT	9 cut(s)	11, 48, 73, 580, 1007, 1435, 1582, 1988, 2124
HpyCH4IV	ACGT	2 cut(s)	1064, 1278
HpyF10VI	GCNNNNNNNGC	5 cut(s)	252, 972, 1457, 1555, 2374
HpySE526I	ACGT	2 cut(s)	1064, 1278
KflI	GGGWCCC	1 cut(s)	1388
Ksp22I	TGATCA	1 cut(s)	2802
LmnI	GCTCC	4 cut(s)	539, 594, 2374, 2454
Lsp1109I	GCAGC	5 cut(s)	191, 212, 544, 987, 1195
LweI	GCATC	5 cut(s)	26, 88, 467, 1692, 2355
MaeI	CTAG	9 cut(s)	398, 425, 746, 1511, 1535, 1731, 1947, 2333, 2468
MaeII	ACGT	2 cut(s)	1064, 1278
MaeIII	GTNAC	6 cut(s)	73, 922, 1237, 1429, 1949, 2201
MbiI	CCGCTC	1 cut(s)	2642
MboII	GAAGA	8 cut(s)	254, 641, 832, 2011, 2135, 2301, 2729, 2836
MflI	RGATCY	2 cut(s)	1207, 2335
MhlI	GDGCHC	3 cut(s)	1613, 2379, 2886
MluI	ACGCGT	1 cut(s)	244
MlyI	GAGTC	5 cut(s)	150, 805, 1170, 2011, 2471
MmeI	TCCRAC	5 cut(s)	172, 746, 969, 1098, 2118
MroXI	GAANNNNTTC	1 cut(s)	496
MslI	CAYNNNNRTG	3 cut(s)	2125, 2709, 2753
MspA1I	CMGCKG	1 cut(s)	2193
MspCI	CTTAAG	1 cut(s)	1043
MspI	CCGG	2 cut(s)	175, 2106
MspR9I	CCNGG	4 cut(s)	618, 724, 2261, 2609
Mva1269I	GAATGC	2 cut(s)	1752, 2112
MvaI	CCWGG	4 cut(s)	618, 724, 2261, 2609
MvnI	CGCG	1 cut(s)	246
MwoI	GCNNNNNNNGC	5 cut(s)	252, 972, 1457, 1555, 2374
NcoI	CCATGG	2 cut(s)	1791, 1908
NlaIV	GGNNCC	8 cut(s)	55, 1389, 1390, 1548, 1611, 1612, 2506, 2697
NmeAIII	GCCGAG	1 cut(s)	2394
NmuCI	GTSAC	2 cut(s)	73, 1429
NspI	RCATGY	1 cut(s)	2065
NspV	TTCGAA	3 cut(s)	1264, 1411, 1685
OliI	CACNNNNGTG	1 cut(s)	2125
PaeI	GCATGC	1 cut(s)	2065
PagI	TCATGA	1 cut(s)	2704
PctI	GAATGC	2 cut(s)	1752, 2112
PdmI	GAANNNNTTC	1 cut(s)	496
PfeI	GAWTC	7 cut(s)	1100, 1359, 1913, 1922, 1939, 2419, 2542
PflFI	GACNNNGTC	1 cut(s)	71
PkrI	GCNGC	7 cut(s)	206, 227, 559, 977, 1185, 1541, 2641
PleI	GAGTC	5 cut(s)	150, 805, 1169, 2010, 2470
PpsI	GAGTC	5 cut(s)	150, 805, 1169, 2010, 2470
PpuMI	RGGWCCY	1 cut(s)	1388
PshAI	GACNNNNGTC	1 cut(s)	762
PsiI	TTATAA	1 cut(s)	1002
Psp124BI	GAGCTC	1 cut(s)	2379
Psp5II	RGGWCCY	1 cut(s)	1388
Psp6I	CCWGG	4 cut(s)	616, 722, 2259, 2607
PspGI	CCWGG	4 cut(s)	616, 722, 2259, 2607
PspN4I	GGNNCC	8 cut(s)	55, 1389, 1390, 1548, 1611, 1612, 2506, 2697
PspOMI	GGGCCC	1 cut(s)	1609
PspPPI	RGGWCCY	1 cut(s)	1388
PstI	CTGCAG	1 cut(s)	92
PsuI	RGATCY	2 cut(s)	1207, 2335
PsyI	GACNNNGTC	1 cut(s)	71
RsaI	GTAC	4 cut(s)	13, 1894, 1934, 1990
RsaNI	GTAC	4 cut(s)	12, 1893, 1933, 1989
RseI	CAYNNNNRTG	3 cut(s)	2125, 2709, 2753
SacI	GAGCTC	1 cut(s)	2379
SatI	GCNGC	7 cut(s)	205, 226, 558, 976, 1184, 1540, 2640
ScaI	AGTACT	1 cut(s)	13
SchI	GAGTC	5 cut(s)	150, 805, 1170, 2011, 2471
ScrFI	CCNGG	4 cut(s)	618, 724, 2261, 2609
SduI	GDGCHC	3 cut(s)	1613, 2379, 2886
SfaNI	GCATC	5 cut(s)	26, 88, 467, 1692, 2355
SfcI	CTRYAG	1 cut(s)	88
SfuI	TTCGAA	3 cut(s)	1264, 1411, 1685
SinI	GGWCC	7 cut(s)	1071, 1388, 1438, 1648, 2155, 2400, 2696
SmiMI	CAYNNNNRTG	3 cut(s)	2125, 2709, 2753
SmlI	CTYRAG	3 cut(s)	1043, 2086, 2206
SmoI	CTYRAG	3 cut(s)	1043, 2086, 2206
SpeI	ACTAGT	1 cut(s)	745
SphI	GCATGC	1 cut(s)	2065
SsiI	CCGC	5 cut(s)	480, 1539, 2191, 2640, 2682
SspMI	CTAG	9 cut(s)	398, 425, 746, 1511, 1535, 1731, 1947, 2333, 2468
SstI	GAGCTC	1 cut(s)	2379
StyD4I	CCNGG	4 cut(s)	616, 722, 2259, 2607
StyI	CCWWGG	3 cut(s)	552, 1791, 1908
TaaI	ACNGT	9 cut(s)	11, 48, 73, 580, 1007, 1435, 1582, 1988, 2124
TaiI	ACGT	2 cut(s)	1067, 1281
TaqI	TCGA	5 cut(s)	123, 1264, 1411, 1685, 2304
TatI	WGTACW	3 cut(s)	11, 1932, 1988
TauI	GCSGC	2 cut(s)	1542, 2642
TfiI	GAWTC	7 cut(s)	1100, 1359, 1913, 1922, 1939, 2419, 2542
TscAI	CASTG	5 cut(s)	97, 166, 583, 2728, 2848
TseFI	GTSAC	2 cut(s)	73, 1429
TseI	GCWGC	5 cut(s)	204, 225, 557, 975, 1183
Tsp45I	GTSAC	2 cut(s)	73, 1429
TspGWI	ACGGA	2 cut(s)	2646, 2884
TspRI	CASTG	5 cut(s)	97, 166, 583, 2728, 2848
Tth111I	GACNNNGTC	1 cut(s)	71
Vha464I	CTTAAG	1 cut(s)	1043
VpaK11BI	GGWCC	7 cut(s)	1071, 1388, 1438, 1648, 2155, 2400, 2696
XagI	CCTNNNNNAGG	4 cut(s)	315, 551, 1604, 2258
XapI	RAATTY	9 cut(s)	841, 879, 1018, 1130, 1394, 1824, 2407, 2685, 2891
XbaI	TCTAGA	1 cut(s)	397
XceI	RCATGY	1 cut(s)	2065
XcmI	CCANNNNNNNNNTGG	1 cut(s)	1479
XmiI	GTMKAC	1 cut(s)	2866
XmnI	GAANNNNTTC	1 cut(s)	496
XspI	CTAG	9 cut(s)	398, 425, 746, 1511, 1535, 1731, 1947, 2333, 2468
ZrmI	AGTACT	1 cut(s)	13

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.