regulation of response to stimulus
| Domain Name | Pfam ID | Position | E-value | Description |
|---|---|---|---|---|
| LRRNT_2 | PF08263 | 53 - 90 | 1.2e-12 | Leucine rich repeat N-terminal domain |
| LRR_14 | PF23598 | 131 - 214 | 2.9e-08 | Leucine-rich repeat region |
| LRR_14 | PF23598 | 236 - 421 | 7.8e-12 | Leucine-rich repeat region |
| LRR_14 | PF23598 | 725 - 816 | 3.9e-08 | Leucine-rich repeat region |
| LRR_8 | PF13855 | 759 - 798 | 1.3e-06 | Leucine rich repeat |
| LRR_4 | PF12799 | 764 - 802 | 5.8e-06 | Leucine Rich repeats (2 copies) |
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| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AanI | TTATAA | 1 cut(s) | 2385 |
| AccB1I | GGYRCC | 1 cut(s) | 2222 |
| AccIII | TCCGGA | 2 cut(s) | 303, 2396 |
| AciI | CCGC | 7 cut(s) | 670, 1324, 1590, 1667, 1918, 1969, 2619 |
| AclWI | GGATC | 4 cut(s) | 197, 1891, 2254, 2267 |
| AcsI | RAATTY | 9 cut(s) | 258, 917, 978, 1033, 1104, 1379, 2230, 2331, 2403 |
| AcuI | CTGAAG | 2 cut(s) | 2214, 2520 |
| AdeI | CACNNNGTG | 2 cut(s) | 2471, 2493 |
| AfaI | GTAC | 4 cut(s) | 590, 2011, 2126, 2586 |
| AfiI | CCNNNNNNNGG | 4 cut(s) | 542, 1440, 2323, 2521 |
| AhlI | ACTAGT | 1 cut(s) | 1009 |
| AjnI | CCWGG | 1 cut(s) | 420 |
| AjuI | GAANNNNNNNTTGG | 4 cut(s) | 595, 627, 2269, 2301 |
| AleI | CACNNNNGTG | 1 cut(s) | 1441 |
| AluBI | AGCT | 8 cut(s) | 183, 402, 432, 478, 1061, 1174, 2343, 2422 |
| AluI | AGCT | 8 cut(s) | 183, 402, 432, 478, 1061, 1174, 2343, 2422 |
| Alw21I | GWGCWC | 2 cut(s) | 131, 175 |
| Alw26I | GTCTC | 2 cut(s) | 1623, 1836 |
| AlwI | GGATC | 4 cut(s) | 197, 1891, 2254, 2267 |
| Ama87I | CYCGRG | 1 cut(s) | 575 |
| Aor13HI | TCCGGA | 2 cut(s) | 303, 2396 |
| AoxI | GGCC | 3 cut(s) | 280, 1426, 1493 |
| ApaI | GGGCCC | 1 cut(s) | 1430 |
| ApeKI | GCWGC | 2 cut(s) | 1600, 2205 |
| ApoI | RAATTY | 9 cut(s) | 258, 917, 978, 1033, 1104, 1379, 2230, 2331, 2403 |
| ArsI | GACNNNNNNTTYG | 2 cut(s) | 775, 807 |
| Asp700I | GAANNNNTTC | 3 cut(s) | 753, 893, 2407 |
| AsuHPI | GGTGA | 6 cut(s) | 26, 122, 614, 1799, 2072, 2195 |
| AvaI | CYCGRG | 1 cut(s) | 575 |
| AvaII | GGWCC | 7 cut(s) | 298, 424, 579, 661, 796, 1446, 1920 |
| BaeGI | GKGCMC | 3 cut(s) | 1430, 2225, 2498 |
| BamHI | GGATCC | 1 cut(s) | 2259 |
| BanI | GGYRCC | 1 cut(s) | 2222 |
| BanII | GRGCYC | 1 cut(s) | 1430 |
| BauI | CACGAG | 1 cut(s) | 1149 |
| Bbv12I | GWGCWC | 2 cut(s) | 131, 175 |
| BbvCI | CCTCAGC | 1 cut(s) | 428 |
| BbvI | GCAGC | 2 cut(s) | 1612, 2217 |
| BccI | CCATC | 6 cut(s) | 289, 1375, 1956, 2470, 2524, 2540 |
| BciT130I | CCWGG | 1 cut(s) | 422 |
| BciVI | GTATCC | 1 cut(s) | 1903 |
| BcoDI | GTCTC | 2 cut(s) | 1623, 1836 |
| BcuI | ACTAGT | 1 cut(s) | 1009 |
| BfaI | CTAG | 6 cut(s) | 132, 1010, 1331, 1818, 2138, 2696 |
| BfuI | GTATCC | 1 cut(s) | 1903 |
| BglII | AGATCT | 1 cut(s) | 2140 |
| BisI | GCNGC | 5 cut(s) | 670, 1591, 1601, 2206, 2620 |
| BlsI | GCNGC | 5 cut(s) | 671, 1592, 1602, 2207, 2621 |
| BmcAI | AGTACT | 1 cut(s) | 590 |
| Bme1390I | CCNGG | 1 cut(s) | 422 |
| Bme18I | GGWCC | 7 cut(s) | 298, 424, 579, 661, 796, 1446, 1920 |
| BmeT110I | CYCGRG | 1 cut(s) | 575 |
| BmiI | GGNNCC | 5 cut(s) | 580, 1161, 1428, 2224, 2261 |
| BmrFI | CCNGG | 1 cut(s) | 422 |
| BmsI | GCATC | 4 cut(s) | 83, 521, 1512, 2515 |
| BoxI | GACNNNNGTC | 1 cut(s) | 1989 |
| BpmI | CTGGAG | 2 cut(s) | 752, 1662 |
| Bpu10I | CCTNAGC | 2 cut(s) | 428, 665 |
| BpuEI | CTTGAG | 3 cut(s) | 1118, 1221, 2105 |
| BsaAI | YACGTR | 1 cut(s) | 81 |
| BsaWI | WCCGGW | 2 cut(s) | 303, 2396 |
| BsaXI | ACNNNNNCTCC | 2 cut(s) | 750, 780 |
| Bsc4I | CCNNNNNNNGG | 4 cut(s) | 542, 1440, 2323, 2521 |
| Bse118I | RCCGGY | 1 cut(s) | 278 |
| Bse1I | ACTGG | 1 cut(s) | 1939 |
| Bse3DI | GCAATG | 1 cut(s) | 867 |
| BseAI | TCCGGA | 2 cut(s) | 303, 2396 |
| BseBI | CCWGG | 1 cut(s) | 422 |
| BseGI | GGATG | 3 cut(s) | 1367, 1977, 2530 |
| BseLI | CCNNNNNNNGG | 4 cut(s) | 542, 1440, 2323, 2521 |
| BseMI | GCAATG | 1 cut(s) | 867 |
| BseMII | CTCAG | 1 cut(s) | 442 |
| BseNI | ACTGG | 1 cut(s) | 1939 |
| BseRI | GAGGAG | 1 cut(s) | 1840 |
| BseSI | GKGCMC | 3 cut(s) | 1430, 2225, 2498 |
| BseXI | GCAGC | 2 cut(s) | 1612, 2217 |
| BseYI | CCCAGC | 1 cut(s) | 1429 |
| BshFI | GGCC | 3 cut(s) | 282, 1428, 1495 |
| BshNI | GGYRCC | 1 cut(s) | 2222 |
| BsiHKAI | GWGCWC | 2 cut(s) | 131, 175 |
| BsiHKCI | CYCGRG | 1 cut(s) | 575 |
| BsiSI | CCGG | 3 cut(s) | 279, 304, 2397 |
| BslFI | GGGAC | 5 cut(s) | 356, 1008, 1114, 2340, 2350 |
| BslI | CCNNNNNNNGG | 4 cut(s) | 542, 1440, 2323, 2521 |
| BsmAI | GTCTC | 2 cut(s) | 1623, 1836 |
| BsmFI | GGGAC | 5 cut(s) | 356, 1008, 1114, 2340, 2350 |
| BsmI | GAATGC | 1 cut(s) | 753 |
| BsnI | GGCC | 3 cut(s) | 282, 1428, 1495 |
| BsoBI | CYCGRG | 1 cut(s) | 575 |
| Bsp120I | GGGCCC | 1 cut(s) | 1426 |
| Bsp1286I | GDGCHC | 5 cut(s) | 131, 175, 1430, 2225, 2498 |
| Bsp13I | TCCGGA | 2 cut(s) | 303, 2396 |
| Bsp1407I | TGTACA | 1 cut(s) | 2124 |
| BspACI | CCGC | 7 cut(s) | 670, 1324, 1590, 1667, 1918, 1969, 2619 |
| BspANI | GGCC | 3 cut(s) | 282, 1428, 1495 |
| BspCNI | CTCAG | 1 cut(s) | 441 |
| BspEI | TCCGGA | 2 cut(s) | 303, 2396 |
| BspHI | TCATGA | 1 cut(s) | 235 |
| BspLI | GGNNCC | 5 cut(s) | 580, 1161, 1428, 2224, 2261 |
| BspPI | GGATC | 4 cut(s) | 197, 1891, 2254, 2267 |
| BspT107I | GGYRCC | 1 cut(s) | 2222 |
| BsrDI | GCAATG | 1 cut(s) | 867 |
| BsrFI | RCCGGY | 1 cut(s) | 278 |
| BsrGI | TGTACA | 1 cut(s) | 2124 |
| BsrI | ACTGG | 1 cut(s) | 1939 |
| BssAI | RCCGGY | 1 cut(s) | 278 |
| BssSI | CACGAG | 1 cut(s) | 1149 |
| Bst2BI | CACGAG | 1 cut(s) | 1149 |
| Bst2UI | CCWGG | 1 cut(s) | 422 |
| Bst4CI | ACNGT | 6 cut(s) | 139, 818, 827, 1199, 1956, 2469 |
| Bst6I | CTCTTC | 3 cut(s) | 330, 634, 912 |
| BstAPI | GCANNNNNTGC | 1 cut(s) | 1664 |
| BstAUI | TGTACA | 1 cut(s) | 2124 |
| BstBAI | YACGTR | 1 cut(s) | 81 |
| BstC8I | GCNNGC | 2 cut(s) | 171, 1328 |
| BstDEI | CTNAG | 7 cut(s) | 428, 665, 1262, 1622, 1988, 2490, 2520 |
| BstEII | GGTNACC | 1 cut(s) | 545 |
| BstF5I | GGATG | 3 cut(s) | 1367, 1977, 2530 |
| BstMAI | GTCTC | 2 cut(s) | 1623, 1836 |
| BstMWI | GCNNNNNNNGC | 5 cut(s) | 273, 1531, 1664, 1915, 2428 |
| BstNI | CCWGG | 1 cut(s) | 422 |
| BstNSI | RCATGY | 2 cut(s) | 706, 1600 |
| BstPAI | GACNNNNGTC | 1 cut(s) | 1989 |
| BstPI | GGTNACC | 1 cut(s) | 545 |
| BstSCI | CCNGG | 1 cut(s) | 420 |
| BstSLI | GKGCMC | 3 cut(s) | 1430, 2225, 2498 |
| BstSNI | TACGTA | 1 cut(s) | 81 |
| BstV1I | GCAGC | 2 cut(s) | 1612, 2217 |
| BstX2I | RGATCY | 2 cut(s) | 2140, 2259 |
| BstXI | CCANNNNNNTGG | 4 cut(s) | 1184, 1296, 1443, 1732 |
| BstYI | RGATCY | 2 cut(s) | 2140, 2259 |
| BsuI | GTATCC | 1 cut(s) | 1903 |
| BsuRI | GGCC | 3 cut(s) | 282, 1428, 1495 |
| BtsCI | GGATG | 3 cut(s) | 1367, 1977, 2530 |
| BtsI | GCAGTG | 1 cut(s) | 90 |
| BtsIMutI | CAGTG | 3 cut(s) | 90, 135, 2465 |
| Cac8I | GCNNGC | 2 cut(s) | 171, 1328 |
| CciI | TCATGA | 1 cut(s) | 235 |
| Cfr10I | RCCGGY | 1 cut(s) | 278 |
| Csp6I | GTAC | 4 cut(s) | 589, 2010, 2125, 2585 |
| CspCI | CAANNNNNGTGG | 4 cut(s) | 1336, 1371, 1765, 1800 |
| CviQI | GTAC | 4 cut(s) | 589, 2010, 2125, 2585 |
| DdeI | CTNAG | 7 cut(s) | 428, 665, 1262, 1622, 1988, 2490, 2520 |
| DraI | TTTAAA | 2 cut(s) | 187, 414 |
| DraIII | CACNNNGTG | 2 cut(s) | 2471, 2493 |
| Eam1104I | CTCTTC | 3 cut(s) | 330, 634, 912 |
| EarI | CTCTTC | 3 cut(s) | 330, 634, 912 |
| EciI | GGCGGA | 1 cut(s) | 1958 |
| Eco105I | TACGTA | 1 cut(s) | 81 |
| Eco24I | GRGCYC | 1 cut(s) | 1430 |
| Eco32I | GATATC | 3 cut(s) | 115, 1311, 2640 |
| Eco47I | GGWCC | 7 cut(s) | 298, 424, 579, 661, 796, 1446, 1920 |
| Eco57I | CTGAAG | 2 cut(s) | 2214, 2520 |
| Eco88I | CYCGRG | 1 cut(s) | 575 |
| Eco91I | GGTNACC | 1 cut(s) | 545 |
| EcoO109I | RGGNCCY | 1 cut(s) | 1426 |
| EcoO65I | GGTNACC | 1 cut(s) | 545 |
| EcoRI | GAATTC | 2 cut(s) | 1104, 2403 |
| EcoRII | CCWGG | 1 cut(s) | 420 |
| EcoRV | GATATC | 3 cut(s) | 115, 1311, 2640 |
| EcoT22I | ATGCAT | 2 cut(s) | 155, 1660 |
| EcoT38I | GRGCYC | 1 cut(s) | 1430 |
| FalI | AAGNNNNNCTT | 4 cut(s) | 713, 745, 2392, 2424 |
| FaqI | GGGAC | 5 cut(s) | 356, 1008, 1114, 2340, 2350 |
| FauI | CCCGC | 1 cut(s) | 1660 |
| FauNDI | CATATG | 1 cut(s) | 691 |
| Fnu4HI | GCNGC | 5 cut(s) | 670, 1591, 1601, 2206, 2620 |
| FokI | GGATG | 3 cut(s) | 1354, 1964, 2537 |
| FriOI | GRGCYC | 1 cut(s) | 1430 |
| Fsp4HI | GCNGC | 5 cut(s) | 670, 1591, 1601, 2206, 2620 |
| FspBI | CTAG | 6 cut(s) | 132, 1010, 1331, 1818, 2138, 2696 |
| GluI | GCNGC | 5 cut(s) | 670, 1591, 1601, 2206, 2620 |
| GsaI | CCCAGC | 1 cut(s) | 1433 |
| GsuI | CTGGAG | 2 cut(s) | 752, 1662 |
| HaeIII | GGCC | 3 cut(s) | 282, 1428, 1495 |
| HapII | CCGG | 3 cut(s) | 279, 304, 2397 |
| HindIII | AAGCTT | 1 cut(s) | 2341 |
| HpaII | CCGG | 3 cut(s) | 279, 304, 2397 |
| HphI | GGTGA | 6 cut(s) | 26, 122, 614, 1799, 2072, 2195 |
| Hpy166II | GTNNAC | 2 cut(s) | 1449, 2125 |
| Hpy188I | TCNGA | 8 cut(s) | 119, 126, 462, 1030, 1193, 1282, 1473, 2743 |
| Hpy8I | GTNNAC | 2 cut(s) | 1449, 2125 |
| HpyAV | CCTTC | 8 cut(s) | 216, 248, 546, 720, 1037, 1982, 2250, 2418 |
| HpyCH4III | ACNGT | 6 cut(s) | 139, 818, 827, 1199, 1956, 2469 |
| HpyCH4IV | ACGT | 2 cut(s) | 80, 2284 |
| HpyF10VI | GCNNNNNNNGC | 5 cut(s) | 273, 1531, 1664, 1915, 2428 |
| HpyF3I | CTNAG | 7 cut(s) | 428, 665, 1262, 1622, 1988, 2490, 2520 |
| HpySE526I | ACGT | 2 cut(s) | 80, 2284 |
| Kpn2I | TCCGGA | 2 cut(s) | 303, 2396 |
| LmnI | GCTCC | 4 cut(s) | 475, 1179, 1626, 1671 |
| Lsp1109I | GCAGC | 2 cut(s) | 1612, 2217 |
| LweI | GCATC | 4 cut(s) | 83, 521, 1512, 2515 |
| MaeI | CTAG | 6 cut(s) | 132, 1010, 1331, 1818, 2138, 2696 |
| MaeII | ACGT | 2 cut(s) | 80, 2284 |
| MaeIII | GTNAC | 7 cut(s) | 545, 723, 1051, 1111, 1255, 1409, 1697 |
| MfeI | CAATTG | 4 cut(s) | 841, 1418, 2246, 2700 |
| MflI | RGATCY | 2 cut(s) | 2140, 2259 |
| MhlI | GDGCHC | 5 cut(s) | 131, 175, 1430, 2225, 2498 |
| MlyI | GAGTC | 4 cut(s) | 341, 687, 1417, 2128 |
| MmeI | TCCRAC | 2 cut(s) | 1587, 1947 |
| Mph1103I | ATGCAT | 2 cut(s) | 155, 1660 |
| MroI | TCCGGA | 2 cut(s) | 303, 2396 |
| MroXI | GAANNNNTTC | 3 cut(s) | 753, 893, 2407 |
| MslI | CAYNNNNRTG | 5 cut(s) | 95, 461, 1441, 1563, 2467 |
| MspA1I | CMGCKG | 1 cut(s) | 1326 |
| MspI | CCGG | 3 cut(s) | 279, 304, 2397 |
| MspR9I | CCNGG | 1 cut(s) | 422 |
| MunI | CAATTG | 4 cut(s) | 841, 1418, 2246, 2700 |
| Mva1269I | GAATGC | 1 cut(s) | 753 |
| MvaI | CCWGG | 1 cut(s) | 422 |
| MwoI | GCNNNNNNNGC | 5 cut(s) | 273, 1531, 1664, 1915, 2428 |
| NdeI | CATATG | 1 cut(s) | 691 |
| NlaIV | GGNNCC | 5 cut(s) | 580, 1161, 1428, 2224, 2261 |
| NmeAIII | GCCGAG | 1 cut(s) | 329 |
| NmuCI | GTSAC | 4 cut(s) | 1111, 1255, 1409, 1697 |
| NsiI | ATGCAT | 2 cut(s) | 155, 1660 |
| NspI | RCATGY | 2 cut(s) | 706, 1600 |
| OliI | CACNNNNGTG | 1 cut(s) | 1441 |
| PagI | TCATGA | 1 cut(s) | 235 |
| PctI | GAATGC | 1 cut(s) | 753 |
| PdmI | GAANNNNTTC | 3 cut(s) | 753, 893, 2407 |
| PfeI | GAWTC | 8 cut(s) | 307, 320, 529, 1188, 1228, 1275, 1555, 2242 |
| PkrI | GCNGC | 5 cut(s) | 671, 1592, 1602, 2207, 2621 |
| PleI | GAGTC | 4 cut(s) | 341, 686, 1416, 2128 |
| PpsI | GAGTC | 4 cut(s) | 341, 686, 1416, 2128 |
| Ppu21I | YACGTR | 1 cut(s) | 81 |
| PshAI | GACNNNNGTC | 1 cut(s) | 1989 |
| PsiI | TTATAA | 1 cut(s) | 2385 |
| Psp6I | CCWGG | 1 cut(s) | 420 |
| PspEI | GGTNACC | 1 cut(s) | 545 |
| PspFI | CCCAGC | 1 cut(s) | 1429 |
| PspGI | CCWGG | 1 cut(s) | 420 |
| PspN4I | GGNNCC | 5 cut(s) | 580, 1161, 1428, 2224, 2261 |
| PspOMI | GGGCCC | 1 cut(s) | 1426 |
| PsuI | RGATCY | 2 cut(s) | 2140, 2259 |
| RsaI | GTAC | 4 cut(s) | 590, 2011, 2126, 2586 |
| RsaNI | GTAC | 4 cut(s) | 589, 2010, 2125, 2585 |
| RseI | CAYNNNNRTG | 5 cut(s) | 95, 461, 1441, 1563, 2467 |
| SatI | GCNGC | 5 cut(s) | 670, 1591, 1601, 2206, 2620 |
| ScaI | AGTACT | 1 cut(s) | 590 |
| SchI | GAGTC | 4 cut(s) | 341, 687, 1417, 2128 |
| ScrFI | CCNGG | 1 cut(s) | 422 |
| SduI | GDGCHC | 5 cut(s) | 131, 175, 1430, 2225, 2498 |
| SfaNI | GCATC | 4 cut(s) | 83, 521, 1512, 2515 |
| SinI | GGWCC | 7 cut(s) | 298, 424, 579, 661, 796, 1446, 1920 |
| SmiMI | CAYNNNNRTG | 5 cut(s) | 95, 461, 1441, 1563, 2467 |
| SmlI | CTYRAG | 3 cut(s) | 1133, 1236, 2084 |
| SmoI | CTYRAG | 3 cut(s) | 1133, 1236, 2084 |
| SnaBI | TACGTA | 1 cut(s) | 81 |
| SpeI | ACTAGT | 1 cut(s) | 1009 |
| SsiI | CCGC | 7 cut(s) | 670, 1324, 1590, 1667, 1918, 1969, 2619 |
| SspI | AATATT | 4 cut(s) | 43, 1397, 1720, 2056 |
| SspMI | CTAG | 6 cut(s) | 132, 1010, 1331, 1818, 2138, 2696 |
| StyD4I | CCNGG | 1 cut(s) | 420 |
| TaaI | ACNGT | 6 cut(s) | 139, 818, 827, 1199, 1956, 2469 |
| TaiI | ACGT | 2 cut(s) | 83, 2287 |
| TaqI | TCGA | 8 cut(s) | 554, 809, 1020, 1304, 1505, 1983, 2292, 2444 |
| TatI | WGTACW | 2 cut(s) | 588, 2124 |
| TauI | GCSGC | 3 cut(s) | 672, 1593, 2622 |
| TfiI | GAWTC | 8 cut(s) | 307, 320, 529, 1188, 1228, 1275, 1555, 2242 |
| TscAI | CASTG | 3 cut(s) | 97, 142, 2472 |
| TseFI | GTSAC | 4 cut(s) | 1111, 1255, 1409, 1697 |
| TseI | GCWGC | 2 cut(s) | 1600, 2205 |
| Tsp45I | GTSAC | 4 cut(s) | 1111, 1255, 1409, 1697 |
| TspGWI | ACGGA | 1 cut(s) | 1070 |
| TspRI | CASTG | 3 cut(s) | 97, 142, 2472 |
| VpaK11BI | GGWCC | 7 cut(s) | 298, 424, 579, 661, 796, 1446, 1920 |
| XapI | RAATTY | 9 cut(s) | 258, 917, 978, 1033, 1104, 1379, 2230, 2331, 2403 |
| XbaI | TCTAGA | 1 cut(s) | 2137 |
| XceI | RCATGY | 2 cut(s) | 706, 1600 |
| XcmI | CCANNNNNNNNNTGG | 1 cut(s) | 1437 |
| XmnI | GAANNNNTTC | 3 cut(s) | 753, 893, 2407 |
| XspI | CTAG | 6 cut(s) | 132, 1010, 1331, 1818, 2138, 2696 |
| ZrmI | AGTACT | 1 cut(s) | 590 |
| Zsp2I | ATGCAT | 2 cut(s) | 155, 1660 |