RchiOBHm_Chr1g0315391

LRR receptor-like serine threonine-protein kinase

Basic Information

Type: gene
Biological Identity
rosa_chinensis
1
Physical Location & Seq
Reverse (-)
2496864 .. 2499728
2865 bp
Loading structure...
UTR
Exon/CDS
Intron
PRQ54591

Sequence Viewer

Length: 2865 bp
ATGGACATCTATGTCTACTTTAACCCTATCTCTCGCCTCATTCTTCACTTCTTGCTCTTGTTATTTTTGGCATCTTCGTGCCTAAACAATAGCAGTGTCGTGGAATCATGCATGGAGGAAGAGAGGCGAGCACTTCTCAGCTTTAAACAAGATCTCACTGATCCTTCTGGTAAGCTTTCTTCTTGGGCTGGTCACGAATGCTGCCAATGGACAGGGATTTCATGCAACAACCGCACTGGTCATGTTGCAACGGTTGACCTCCGTAATACATATCCATACACCACTGATGATGATCAGTGGAACACCACGGAGTATCTTCAATCTTGTTTGGGGGGTAAGTTAATTAATCCTTCTTTGCTTGGCTTGAAACATTTGAGTTACTTAGACTTGAGCTCGAATGATTTTCAAGGGACTCACATTCCCAAGTTTATTGGGGAGCTTACAAGTCTGAGATATCTCAATTTTTCAAGTACCCAGTCTTTGAATTCAGTTGCGGGAGAGATTCCTACTTCTCTTGGTAACCTCTCAAACTTGAACTATCTTGACCTCAGTTCTAGTTATTCTCTTTCTTCCAAAAACTTGAATTGGCTTTCTCATCTCTCTTCCCTAAAATACCTCAATCTTAGAAGTGTGAACCTTAGCAACACAGGAGTTAGTTGGCTACATGAGGTTAACATGCTTCCTTCACTCTTAGAGTTGCATTTGTCTGGTTGCGAAATTGGTGGAAACCAGCTTCCACTATCCATGCCTACAATTAACTTCACATCACTTTTGGTCCTTGATATGTCATGGAATAGTATTAATTTTTCATATCCTAAATGGATGTTTAATCTTACTGGCCTTACAAAAGTTGATCTGAGTGGGAATTCTTTCAGTGGCCCCTTTCTTGATGAATTTGTAAGACTCAAATCTCTACAACACCTTGACTCAGGGAGTATAGGACTCAAAGGTCAATTTCCCAAATTTAGTGGAAATTTGTGCAGGCTCAAGTCATTGAGTCTTGCATGGAGTCAAATTGAAGGGGGGATTGAAGAGTTTTTGAGTGGTTTCTCAAATTATTCATTTAATATAATGGAGTCACTAGATTTGCAAGGCTGTGGGCTGGTAGGCAAATTGCCTAGTTCGTTGGGAATGCTGAGAAGCCTGCAGCATCTCTATCTCAGCTCCAACTCTTTTTGGGGATCCATTCCAGAATTTATTATCAGCAATTTATCATCATCCCTGAAGACACTTGATCTCAGGGATAATATTTTCAACGGTTCCATTCCTCAAAGTTTGGGAAAACTTTCTCAGCTAGTGAGCCTTTATCTATCTTATAATTCATGGGAAGGCAATTTAACCGAAGCCCATTTCATAAATCTCACAAAATTAGAGTCTTTTGCAGTTAGCACAACCCAACCTGTGCCCATCATTTTCAATTTGATTGATTATGAATGGATTCCTCCTTTCAAGCTCTACCACATTGGAATGATCAACTGCCGAGTAGGCCCCGGCTTCCCTGTATGGCTTCAATCTCAAACTGAGCTCGTGTGGGTCTCACTTAAGAATGCTGGAATCTCGGGTCTAATACCAGAGGAATGGCTCTTTAAGATATCTTCCCAAATCCAATCGTTGGATTTATCTTACAATCAAATAAGTGGAAAGCTTCCGTTCCGATTCAACTCTTTTCCGAATCTACTTTCCATAGTTTTGAGCCATAATCAATTTGATGGAACTATTCCATCATCTATTTGTAGCATTCAATCTCTATCTGACCTTGCTCTGAATAACAATCAGTTATCCGGAGAATTCCCTAAAGAATGGGGTTTGTGGAGCAGCATAGTCATTGTGGATGTCTCAAACAACAATATGTCTGGTAATATTCCAAGCTCAATGGGCATTCCAAGTTCTCTTTTTACACTAAAGATAGACAACAATCAATTTAGCGGAGAAATTCCTTCTGCCTTGCAAAATTGCTCAGCTTTGGAGAGACTTTATCTTGGAGGCAACAAATTTACTGGAAGCATACCTTCTTGGATAGGATCAAAAGTATCCACAATCACAGTGCTGCAATTGCAATCAAACTCTTTAAGTGGACATATTCCTCATCATTTGTGCAGTCTTCCTTCCCTTCAAATCCTAGACCTAAGTCACAATAGATTTTCAGGGACTATTCCCAACTGTTTGAATAAATTGACTTCTTTAATCTCTAGTAGTTATGGGGGCTGGAATTACTCTGGTGATTTTGAGGTAATAACTGTGACTGTAAAAGGAAGAGCAAGTGAATACTTCTTACGCAACGAGGTGCTTCTAACCATTATTGATTTTTCGCATAATGATTTAGAAGGTGAAATTCCTGAAGAAATCAGCAGTCTCGTTCAATTAGCTACATTAAACTTGTCCATTAATCAATTAAGTGGAAATATCCCCTCAAAAATTGGAAACTTGCACTTGCTTGAAACACTTGACCTCTCCCAGAACCAGCTTTCAGGACAGATTCCACAAAGTCTCGCTTCTCTGACTTTCTTATCTCACTTGAACTTGTCTTGCAACAAGTTGACCGGAAGAATTCCTTCGGGTAACCAACTTCAGACGCTCGATGATTCATCTATTTATGAGGGCAATCCTTCACTCTGTGGATTTCCTCTTTCAAATTGCACAGAAGATGGAGGCAACATGCATGAGCCTCATGAAGCTGATGATGAAAAGCTTGGTTTATATACCAGCGCGGTGCTTGGCTTTATCATAGGTTTTTGGAGTGTTTGTGGCACATTGATATTGAAGAAGTCATGGAGGTATGCTTATTTTCAATTTTTTGACCACATCAAGGAGAAAGTAGCACTAGCAATTGCATTGAAAGTAGCTCGTTTGAAAGCAAGGCAGTGA

Protein Analysis

954

Amino Acids

105.57

Weight (kDa)

5.65

Isoelectric Point (pI)

41.48

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
LRRNT_2 PF08263 39 - 76 1.1e-12 Leucine rich repeat N-terminal domain
LRR_14 PF23598 117 - 185 6e-06 Leucine-rich repeat region
LRR_14 PF23598 181 - 333 2.8e-07 Leucine-rich repeat region
LRR_14 PF23598 324 - 507 1.8e-10 Leucine-rich repeat region
LRR_8 PF13855 380 - 440 9.4e-06 Leucine rich repeat
LRR_14 PF23598 535 - 713 1.2e-07 Leucine-rich repeat region
LRR_14 PF23598 773 - 864 1.1e-08 Leucine-rich repeat region
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready

Orthologous Genes (Group: OG0000048)

Species Orthologous Gene IDs
arabidopsis_thaliana AT2G34930
fragaria_vesca FvH4_3g12670 FvH4_3g12672 FvH4_3g12740 FvH4_3g12742 FvH4_3g12770 FvH4_3g12770 FvH4_3g12860 FvH4_3g12890 FvH4_3g13431 FvH4_3g13433 FvH4_3g13435 FvH4_3g13470 FvH4_3g13470 FvH4_3g13480 FvH4_3g13562 FvH4_3g13580 FvH4_3g13600 FvH4_3g13600 FvH4_3g13600 FvH4_3g13600 FvH4_3g13600 FvH4_3g13600 FvH4_3g13610 FvH4_3g13620 FvH4_3g13620 FvH4_3g23240 FvH4_3g32910 FvH4_3g35070 FvH4_3g45520 FvH4_5g08430 FvH4_5g08450 FvH4_6g53230 FvH4_6g53300
malus_domestica MD05G1217600.v1.1 MD05G1217700.v1.1 MD05G1224700.v1.1 MD05G1225100.v1.1 MD05G1225300.v1.1 MD05G1225400.v1.1 MD05G1235900.v1.1 MD05G1236100.v1.1 MD05G1236300.v1.1 MD05G1237200.v1.1 MD05G1241600.v1.1 MD05G1245700.v1.1 MD05G1245800.v1.1 MD05G1245900.v1.1 MD05G1246000.v1.1 MD05G1246100.v1.1 MD05G1246300.v1.1 MD05G1246400.v1.1 MD05G1246500.v1.1 MD05G1248100.v1.1 MD05G1248200.v1.1 MD05G1264300.v1.1 MD05G1275900.v1.1 MD07G1051400.v1.1 MD09G1012600.v1.1 MD09G1012700.v1.1 MD09G1012800.v1.1 MD10G1221400.v1.1 MD10G1221500.v1.1 MD10G1221600.v1.1 MD10G1221900.v1.1 MD10G1222200.v1.1 MD10G1222400.v1.1 MD10G1222500.v1.1 MD10G1222900.v1.1 MD10G1223000.v1.1 MD10G1223100.v1.1 MD10G1223500.v1.1 MD10G1228000.v1.1 MD12G1019600.v1.1 MD12G1020000.v1.1 MD12G1020100.v1.1 MD17G1013200.v1.1 MD17G1013300.v1.1 MD17G1013400.v1.1
prunus_persica Prupe.1G060500_v2.0.a1 Prupe.1G100100_v2.0.a1 Prupe.3G124000_v2.0.a1 Prupe.3G304400_v2.0.a1 Prupe.4G116800_v2.0.a1 Prupe.4G116900_v2.0.a1 Prupe.4G117000_v2.0.a1 Prupe.4G121800_v2.0.a1 Prupe.4G121900_v2.0.a1 Prupe.4G122000_v2.0.a1 Prupe.4G122100_v2.0.a1 Prupe.4G122200_v2.0.a1 Prupe.4G122300_v2.0.a1 Prupe.4G122500_v2.0.a1 Prupe.4G122600_v2.0.a1 Prupe.4G122800_v2.0.a1 Prupe.4G122900_v2.0.a1 Prupe.4G123000_v2.0.a1 Prupe.4G123100_v2.0.a1 Prupe.4G123200_v2.0.a1 Prupe.4G131500_v2.0.a1 Prupe.4G131600_v2.0.a1 Prupe.7G032500_v2.0.a1 Prupe.7G032900_v2.0.a1 Prupe.7G033000_v2.0.a1 Prupe.7G033100_v2.0.a1 Prupe.7G033300_v2.0.a1 Prupe.7G033600_v2.0.a1 Prupe.7G034600_v2.0.a1 Prupe.7G040200_v2.0.a1 Prupe.7G059200_v2.0.a1
pyrus_communis pycom05g20580 pycom05g20590 pycom05g20760 pycom05g20800 pycom05g21280 pycom05g21290 pycom05g21820 pycom05g21830 pycom05g22180 pycom05g22190 pycom05g22210 pycom05g22450 pycom05g22460 pycom05g22470 pycom05g22480 pycom05g22490 pycom05g23770 pycom05g23780 pycom05g24050 pycom05g24060 pycom07g03910 pycom10g18700 pycom10g18720 pycom10g18730 pycom10g18740 pycom10g19150 pycom111g01060 pycom12g01660 pycom12g01690 pycom12g01720 pycom12g01740 pycom12g01750 pycom12g01770 pycom12g01810 pycom12g01820 pycom12g01830 pycom12g01840 pycom12g01870 pycom12g01900 pycom17g01060 pycom17g01070
rosa_chinensis RchiOBHm_Chr1g0315041 RchiOBHm_Chr1g0315051 RchiOBHm_Chr1g0315071 RchiOBHm_Chr1g0315161 RchiOBHm_Chr1g0315211 RchiOBHm_Chr1g0315251 RchiOBHm_Chr1g0315321 RchiOBHm_Chr1g0315391 RchiOBHm_Chr1g0315451 RchiOBHm_Chr1g0315481 RchiOBHm_Chr1g0315551 RchiOBHm_Chr1g0315601 RchiOBHm_Chr1g0315621 RchiOBHm_Chr1g0359221 RchiOBHm_Chr2g0142981 RchiOBHm_Chr2g0143001 RchiOBHm_Chr2g0143061 RchiOBHm_Chr2g0143091 RchiOBHm_Chr2g0175321 RchiOBHm_Chr2g0175341 RchiOBHm_Chr2g0175361 RchiOBHm_Chr2g0175371 RchiOBHm_Chr3g0470491 RchiOBHm_Chr3g0480881 RchiOBHm_Chr3g0485511 RchiOBHm_Chr5g0020741 RchiOBHm_Chr5g0020901 RchiOBHm_Chr5g0020931 RchiOBHm_Chr5g0020941 RchiOBHm_Chr5g0020961 RchiOBHm_Chr5g0020971 RchiOBHm_Chr5g0021451 RchiOBHm_Chr5g0021531 RchiOBHm_Chr5g0021831 RchiOBHm_Chr5g0021841 RchiOBHm_Chr5g0021931 RchiOBHm_Chr5g0021941 RchiOBHm_Chr5g0021981 RchiOBHm_Chr5g0021991 RchiOBHm_Chr5g0022011 RchiOBHm_Chr5g0022181 RchiOBHm_Chr5g0022191 RchiOBHm_Chr5g0022211 RchiOBHm_Chr5g0022221 RchiOBHm_Chr5g0022231 RchiOBHm_Chr5g0022291 RchiOBHm_Chr5g0022301 RchiOBHm_Chr5g0022331 RchiOBHm_Chr5g0022361 RchiOBHm_Chr5g0022371 RchiOBHm_Chr5g0022381 RchiOBHm_Chr5g0022401 RchiOBHm_Chr5g0022431 RchiOBHm_Chr5g0022451 RchiOBHm_Chr5g0022541 RchiOBHm_Chr5g0022591 RchiOBHm_Chr5g0022601 RchiOBHm_Chr5g0022701 RchiOBHm_Chr5g0022741 RchiOBHm_Chr5g0022791 RchiOBHm_Chr5g0022811 RchiOBHm_Chr5g0022851 RchiOBHm_Chr5g0029441 RchiOBHm_Chr5g0041631 RchiOBHm_Chr5g0069391 RchiOBHm_Chr6g0273811 RchiOBHm_Chr6g0273831 RchiOBHm_Chr6g0275331 RchiOBHm_Chr7g0219061
rosa_laevigata RLG00000002463 RLG00000020007 RLG00000020008 RLG00000022320 RLG00000022321 RLG00000023446 RLG00000030742 RLG00000030743 RLG00000030747 RLG00000032557 RLG00000032564 RLG00000032571 RLG00000032573 RLG00000032574 RLG00000032612 RLG00000032633 RLG00000032636 RLG00000032638 RLG00000032650 RLG00000032651 RLG00000032652 RLG00000032653 RLG00000032655 RLG00000032673 RLG00000032678 RLG00000032769 RLG00000032857 RLG00000033168 RLG00000033465 RLG00000034086 RLG00000034222 RLG00000035290
rosa_multiflora Rmu_co8143358.1_g000001 Rmu_co8518791.1_g000001 Rmu_sc0000178.1_g000008 Rmu_sc0000178.1_g000014 Rmu_sc0000401.1_g000005 Rmu_sc0000401.1_g000013 Rmu_sc0000401.1_g000017 Rmu_sc0000401.1_g000018 Rmu_sc0000401.1_g000024 Rmu_sc0000401.1_g000025 Rmu_sc0000576.1_g000020 Rmu_sc0001585.1_g000003 Rmu_sc0001585.1_g000005 Rmu_sc0001585.1_g000008 Rmu_sc0001784.1_g000006 Rmu_sc0001784.1_g000011 Rmu_sc0001784.1_g000022 Rmu_sc0001784.1_g000028 Rmu_sc0002052.1_g000004 Rmu_sc0002052.1_g000011 Rmu_sc0002277.1_g000003 Rmu_sc0002277.1_g000006 Rmu_sc0002277.1_g000024 Rmu_sc0002658.1_g000012 Rmu_sc0003512.1_g000004 Rmu_sc0003512.1_g000007 Rmu_sc0004180.1_g000016 Rmu_sc0004180.1_g000029 Rmu_sc0004180.1_g000034 Rmu_sc0005639.1_g000008 Rmu_sc0005639.1_g000023 Rmu_sc0006070.1_g000016 Rmu_sc0006070.1_g000017 Rmu_sc0006966.1_g000021 Rmu_sc0006966.1_g000023 Rmu_sc0007239.1_g000003 Rmu_sc0008460.1_g000010 Rmu_sc0009984.1_g000008 Rmu_sc0010181.1_g000005 Rmu_sc0010181.1_g000010 Rmu_sc0010503.1_g000006 Rmu_sc0011646.1_g000003 Rmu_sc0012984.1_g000011 Rmu_sc0016972.1_g000005 Rmu_sc0016972.1_g000008 Rmu_sc0023070.1_g000003 Rmu_sc0025660.1_g000001 Rmu_ssc0000322.1_g000019
rosa_roxburghii Rroxscaffold_1G00038860 Rroxscaffold_1G00053490 Rroxscaffold_1G00053500 Rroxscaffold_1G00054230 Rroxscaffold_1G00056460 Rroxscaffold_1G00056470 Rroxscaffold_1G00056480 Rroxscaffold_1G00056500 Rroxscaffold_1G00056510 Rroxscaffold_1G00056620 Rroxscaffold_1G00056690 Rroxscaffold_1G00056710 Rroxscaffold_1G00056720 Rroxscaffold_1G00056730 Rroxscaffold_1G00056740 Rroxscaffold_1G00056750 Rroxscaffold_1G00056760 Rroxscaffold_1G00056870 Rroxscaffold_1G00056900 Rroxscaffold_1G00057120 Rroxscaffold_1G00057560 Rroxscaffold_2G00077430 Rroxscaffold_2G00102160 Rroxscaffold_3G00231420 Rroxscaffold_3G00231430 Rroxscaffold_4G00297230 Rroxscaffold_4G00331570 Rroxscaffold_6G00396700 Rroxscaffold_6G00400940 Rroxscaffold_7G00192740
rosa_rugosa Rorug01G0004400 Rorug01G0004500 Rorug02G0377600 Rorug02G0378000 Rorug02G0582800 Rorug02G0583400 Rorug03G0187000 Rorug03G0218800 Rorug04G0081200 Rorug05G0062700 Rorug05G0062700 Rorug05G0063100 Rorug05G0063200 Rorug05G0063200 Rorug05G0063200 Rorug05G0067000 Rorug05G0069700 Rorug05G0069900 Rorug05G0070000 Rorug05G0070100 Rorug05G0070300 Rorug05G0070400 Rorug05G0070600 Rorug05G0070600 Rorug05G0072300 Rorug05G0072400 Rorug05G0072500 Rorug05G0072500 Rorug05G0072600.1 Rorug05G0072700 Rorug05G0072800 Rorug05G0072800 Rorug05G0072900 Rorug05G0073000 Rorug05G0073000 Rorug05G0073400 Rorug05G0073400 Rorug05G0073400 Rorug05G0074800 Rorug05G0075000 Rorug05G0114300 Rorug05G0194200 Rorug06G0097800
rosa_samantha Rh2AG401400 Rh2CG387600 Rh2CG417000 Rh2CG637400 Rh5CG169600 Rh5CG172100 Rh5CG175200 Rh5CG317100 Rh6DG187900
rosa_wichuraiana Rw1G000750 Rw1G000790 Rw1G000820 Rw1G000860 Rw1G000880 Rw1G000910 Rw2G035180 Rw2G035200 Rw2G035240 Rw2G054370 Rw2G054380 Rw5G013570 Rw5G013580 Rw5G013590 Rw5G013910 Rw5G013980 Rw5G014110 Rw5G014120 Rw5G014280 Rw5G014310 Rw5G014400 Rw5G014420 Rw5G014440 Rw5G014460 Rw5G014480 Rw5G014500 Rw5G014520 Rw5G014530 Rw5G042390

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 1 cut(s) 1317
AasI GACNNNNNNGTC 2 cut(s) 11, 948
AccB7I CCANNNNNTGG 1 cut(s) 1612
AccI GTMKAC 1 cut(s) 15
AccII CGCG 1 cut(s) 2708
AccIII TCCGGA 1 cut(s) 1781
AciI CCGC 4 cut(s) 232, 494, 1926, 2708
AclWI GGATC 4 cut(s) 155, 1176, 1189, 2029
AcuI CTGAAG 3 cut(s) 1244, 2358, 2552
AdeI CACNNNGTG 1 cut(s) 2615
AfaI GTAC 1 cut(s) 472
AfiI CCNNNNNNNGG 2 cut(s) 1612, 2806
AflII CTTAAG 1 cut(s) 1541
Alw21I GWGCWC 3 cut(s) 133, 395, 1527
Alw26I GTCTC 5 cut(s) 1540, 1840, 1963, 2357, 2492
AlwI GGATC 4 cut(s) 155, 1176, 1189, 2029
Ama87I CYCGRG 1 cut(s) 1558
Aor13HI TCCGGA 1 cut(s) 1781
AoxI GGCC 3 cut(s) 838, 877, 1486
ApeKI GCWGC 4 cut(s) 201, 1147, 1815, 2047
ArsI GACNNNNNNTTYG 2 cut(s) 1358, 1390
AseI ATTAAT 3 cut(s) 345, 801, 2385
Asp700I GAANNNNTTC 4 cut(s) 869, 1285, 1437, 2551
AspLEI GCGC 1 cut(s) 2708
AspS9I GGNCC 3 cut(s) 775, 878, 1487
AsuC2I CCSGG 1 cut(s) 1491
AsuHPI GGTGA 2 cut(s) 2231, 2339
AvaI CYCGRG 1 cut(s) 1558
AvaII GGWCC 1 cut(s) 775
BaeGI GKGCMC 1 cut(s) 1407
BamHI GGATCC 1 cut(s) 1181
BanII GRGCYC 2 cut(s) 395, 1527
BarI GAAGNNNNNNTAC 2 cut(s) 163, 195
BauI CACGAG 1 cut(s) 1526
BbsI GAAGAC 2 cut(s) 1232, 2093
Bbv12I GWGCWC 3 cut(s) 133, 395, 1527
BbvI GCAGC 4 cut(s) 188, 1159, 1827, 2034
BccI CCATC 4 cut(s) 1415, 1703, 1729, 2639
BciVI GTATCC 1 cut(s) 2041
BclI TGATCA 2 cut(s) 292, 1470
BcnI CCSGG 1 cut(s) 1491
BcoDI GTCTC 5 cut(s) 1540, 1840, 1963, 2357, 2492
BfaI CTAG 7 cut(s) 555, 1082, 1119, 1295, 2120, 2190, 2822
BfmI CTRYAG 1 cut(s) 1145
BfrI CTTAAG 1 cut(s) 1541
BfuI GTATCC 1 cut(s) 2041
BglI GCCNNNNNGGC 1 cut(s) 1485
BglII AGATCT 1 cut(s) 151
BisI GCNGC 4 cut(s) 202, 1148, 1816, 2048
BlpI GCTNAGC 1 cut(s) 1957
BlsI GCNGC 4 cut(s) 203, 1149, 1817, 2049
Bme1390I CCNGG 1 cut(s) 1491
Bme18I GGWCC 1 cut(s) 775
BmeT110I CYCGRG 1 cut(s) 1558
BmgT120I GGNCC 3 cut(s) 775, 878, 1487
BmiI GGNNCC 4 cut(s) 880, 1183, 1261, 1489
BmrFI CCNGG 1 cut(s) 1491
BmrI ACTGGG 1 cut(s) 469
BmsI GCATC 2 cut(s) 80, 1159
BmuI ACTGGG 1 cut(s) 469
BoxI GACNNNNGTC 1 cut(s) 2127
BpiI GAAGAC 2 cut(s) 1232, 2093
BplI GAGNNNNNCTC 2 cut(s) 120, 152
Bpu10I CCTNAGC 1 cut(s) 638
Bpu1102I GCTNAGC 1 cut(s) 1957
BpuEI CTTGAG 2 cut(s) 409, 971
BpuMI CCSGG 1 cut(s) 1491
BsaBI GATNNNNATC 1 cut(s) 291
BsaI GGTCTC 1 cut(s) 1540
BsaJI CCNNGG 2 cut(s) 306, 1489
BsaWI WCCGGW 2 cut(s) 1781, 2540
BsaXI ACNNNNNCTCC 2 cut(s) 2728, 2758
Bsc4I CCNNNNNNNGG 2 cut(s) 1612, 2806
Bse1I ACTGG 4 cut(s) 241, 475, 841, 2002
Bse8I GATNNNNATC 1 cut(s) 291
BseAI TCCGGA 1 cut(s) 1781
BseDI CCNNGG 2 cut(s) 306, 1489
BseGI GGATG 3 cut(s) 828, 1217, 1837
BseJI GATNNNNATC 1 cut(s) 291
BseLI CCNNNNNNNGG 2 cut(s) 1612, 2806
BseNI ACTGG 4 cut(s) 241, 475, 841, 2002
BseSI GKGCMC 1 cut(s) 1407
BseXI GCAGC 4 cut(s) 188, 1159, 1827, 2034
BsgI GTGCAG 2 cut(s) 1000, 2116
Bsh1236I CGCG 1 cut(s) 2708
BshFI GGCC 3 cut(s) 840, 879, 1488
BsiHKAI GWGCWC 3 cut(s) 133, 395, 1527
BsiHKCI CYCGRG 1 cut(s) 1558
BsiSI CCGG 3 cut(s) 1491, 1782, 2541
BslFI GGGAC 2 cut(s) 424, 2161
BslI CCNNNNNNNGG 2 cut(s) 1612, 2806
BsmAI GTCTC 5 cut(s) 1540, 1840, 1963, 2357, 2492
BsmFI GGGAC 2 cut(s) 424, 2161
BsmI GAATGC 5 cut(s) 203, 1137, 1552, 1737, 1878
BsnI GGCC 3 cut(s) 840, 879, 1488
Bso31I GGTCTC 1 cut(s) 1540
BsoBI CYCGRG 1 cut(s) 1558
Bsp1286I GDGCHC 4 cut(s) 133, 395, 1407, 1527
Bsp13I TCCGGA 1 cut(s) 1781
Bsp143I GATC 8 cut(s) 151, 160, 292, 853, 1181, 1234, 1470, 2021
Bsp1720I GCTNAGC 1 cut(s) 1957
BspACI CCGC 4 cut(s) 232, 494, 1926, 2708
BspANI GGCC 3 cut(s) 840, 879, 1488
BspEI TCCGGA 1 cut(s) 1781
BspFNI CGCG 1 cut(s) 2708
BspHI TCATGA 1 cut(s) 2668
BspLI GGNNCC 4 cut(s) 880, 1183, 1261, 1489
BspMAI CTGCAG 1 cut(s) 1149
BspPI GGATC 4 cut(s) 155, 1176, 1189, 2029
BspQI GCTCTTC 1 cut(s) 2248
BspTI CTTAAG 1 cut(s) 1541
BspTNI GGTCTC 1 cut(s) 1540
BsrI ACTGG 4 cut(s) 241, 475, 841, 2002
BssECI CCNNGG 2 cut(s) 306, 1489
BssMI GATC 8 cut(s) 151, 160, 292, 853, 1181, 1234, 1470, 2021
BssSI CACGAG 1 cut(s) 1526
Bst2BI CACGAG 1 cut(s) 1526
Bst4CI ACNGT 6 cut(s) 253, 1259, 2044, 2162, 2239, 2245
Bst6I CTCTTC 4 cut(s) 114, 607, 1026, 2248
BstAFI CTTAAG 1 cut(s) 1541
BstC8I GCNNGC 3 cut(s) 129, 983, 1145
BstDSI CCRYGG 1 cut(s) 306
BstEII GGTNACC 2 cut(s) 518, 2558
BstF5I GGATG 3 cut(s) 828, 1217, 1837
BstFNI CGCG 1 cut(s) 2708
BstHHI GCGC 1 cut(s) 2708
BstKTI GATC 8 cut(s) 154, 163, 295, 856, 1184, 1237, 1473, 2024
BstMAI GTCTC 5 cut(s) 1540, 1840, 1963, 2357, 2492
BstMBI GATC 8 cut(s) 151, 160, 292, 853, 1181, 1234, 1470, 2021
BstMWI GCNNNNNNNGC 4 cut(s) 231, 1485, 1875, 2053
BstNSI RCATGY 2 cut(s) 679, 2659
BstPAI GACNNNNGTC 1 cut(s) 2127
BstPI GGTNACC 2 cut(s) 518, 2558
BstSCI CCNGG 1 cut(s) 1489
BstSFI CTRYAG 1 cut(s) 1145
BstSLI GKGCMC 1 cut(s) 1407
BstUI CGCG 1 cut(s) 2708
BstV1I GCAGC 4 cut(s) 188, 1159, 1827, 2034
BstV2I GAAGAC 2 cut(s) 1232, 2093
BstX2I RGATCY 2 cut(s) 151, 1181
BstXI CCANNNNNNTGG 1 cut(s) 1578
BstYI RGATCY 2 cut(s) 151, 1181
BsuI GTATCC 1 cut(s) 2041
BsuRI GGCC 3 cut(s) 840, 879, 1488
BtgI CCRYGG 1 cut(s) 306
BtsCI GGATG 3 cut(s) 828, 1217, 1837
BtsI GCAGTG 1 cut(s) 100
BtsIMutI CAGTG 7 cut(s) 100, 156, 234, 282, 302, 880, 2049
Cac8I GCNNGC 3 cut(s) 129, 983, 1145
CciI TCATGA 1 cut(s) 2668
CfoI GCGC 1 cut(s) 2708
Cfr13I GGNCC 3 cut(s) 775, 878, 1487
CseI GACGC 1 cut(s) 2581
Csp6I GTAC 1 cut(s) 471
CspCI CAANNNNNGTGG 2 cut(s) 949, 984
CviQI GTAC 1 cut(s) 471
DpnI GATC 8 cut(s) 153, 162, 294, 855, 1183, 1236, 1472, 2023
DpnII GATC 8 cut(s) 151, 160, 292, 853, 1181, 1234, 1470, 2021
DraI TTTAAA 1 cut(s) 145
DraIII CACNNNGTG 1 cut(s) 2615
DrdI GACNNNNNNGTC 2 cut(s) 11, 948
DseDI GACNNNNNNGTC 2 cut(s) 11, 948
Eam1104I CTCTTC 4 cut(s) 114, 607, 1026, 2248
EarI CTCTTC 4 cut(s) 114, 607, 1026, 2248
Ecl136II GAGCTC 2 cut(s) 393, 1525
Eco24I GRGCYC 2 cut(s) 395, 1527
Eco31I GGTCTC 1 cut(s) 1540
Eco32I GATATC 2 cut(s) 455, 1593
Eco47I GGWCC 1 cut(s) 775
Eco53kI GAGCTC 2 cut(s) 393, 1525
Eco57I CTGAAG 3 cut(s) 1244, 2358, 2552
Eco88I CYCGRG 1 cut(s) 1558
Eco91I GGTNACC 2 cut(s) 518, 2558
EcoICRI GAGCTC 2 cut(s) 393, 1525
EcoO109I RGGNCCY 1 cut(s) 1487
EcoO65I GGTNACC 2 cut(s) 518, 2558
EcoRI GAATTC 4 cut(s) 484, 865, 1787, 2547
EcoRV GATATC 2 cut(s) 455, 1593
EcoT22I ATGCAT 2 cut(s) 113, 2661
EcoT38I GRGCYC 2 cut(s) 395, 1527
FalI AAGNNNNNCTT 6 cut(s) 1993, 2025, 2476, 2508, 2536, 2568
FaqI GGGAC 2 cut(s) 424, 2161
FauI CCCGC 1 cut(s) 487
FbaI TGATCA 2 cut(s) 292, 1470
FblI GTMKAC 1 cut(s) 15
Fnu4HI GCNGC 4 cut(s) 202, 1148, 1816, 2048
FokI GGATG 3 cut(s) 835, 1204, 1844
FriOI GRGCYC 2 cut(s) 395, 1527
Fsp4HI GCNGC 4 cut(s) 202, 1148, 1816, 2048
FspBI CTAG 7 cut(s) 555, 1082, 1119, 1295, 2120, 2190, 2822
GlaI GCGC 1 cut(s) 2707
GluI GCNGC 4 cut(s) 202, 1148, 1816, 2048
HaeIII GGCC 3 cut(s) 840, 879, 1488
HapII CCGG 3 cut(s) 1491, 1782, 2541
HgaI GACGC 1 cut(s) 2581
HhaI GCGC 1 cut(s) 2708
Hin6I GCGC 1 cut(s) 2706
HinP1I GCGC 1 cut(s) 2706
HincII GTYRAC 3 cut(s) 256, 673, 2538
HindII GTYRAC 3 cut(s) 256, 673, 2538
HindIII AAGCTT 3 cut(s) 173, 1643, 2687
HpaI GTTAAC 1 cut(s) 673
HpaII CCGG 3 cut(s) 1491, 1782, 2541
HphI GGTGA 2 cut(s) 2231, 2339
Hpy166II GTNNAC 6 cut(s) 16, 256, 634, 673, 2075, 2538
Hpy188I TCNGA 8 cut(s) 450, 858, 1655, 1671, 1753, 1764, 2499, 2571
Hpy188III TCNNGA 8 cut(s) 194, 542, 887, 1190, 1782, 2336, 2469, 2669
Hpy8I GTNNAC 6 cut(s) 16, 256, 634, 673, 2075, 2538
HpyCH4III ACNGT 6 cut(s) 253, 1259, 2044, 2162, 2239, 2245
HpyF10VI GCNNNNNNNGC 4 cut(s) 231, 1485, 1875, 2053
HspAI GCGC 1 cut(s) 2706
Kpn2I TCCGGA 1 cut(s) 1781
Ksp22I TGATCA 2 cut(s) 292, 1470
KspAI GTTAAC 1 cut(s) 673
Kzo9I GATC 8 cut(s) 151, 160, 292, 853, 1181, 1234, 1470, 2021
LguI GCTCTTC 1 cut(s) 2248
LmnI GCTCC 3 cut(s) 436, 1169, 1812
Lsp1109I GCAGC 4 cut(s) 188, 1159, 1827, 2034
LweI GCATC 2 cut(s) 80, 1159
MaeI CTAG 7 cut(s) 555, 1082, 1119, 1295, 2120, 2190, 2822
MaeIII GTNAC 7 cut(s) 191, 377, 518, 1077, 2129, 2239, 2558
MalI GATC 8 cut(s) 153, 162, 294, 855, 1183, 1236, 1472, 2023
MboI GATC 8 cut(s) 151, 160, 292, 853, 1181, 1234, 1470, 2021
MfeI CAATTG 2 cut(s) 2051, 2826
MflI RGATCY 2 cut(s) 151, 1181
MhlI GDGCHC 4 cut(s) 133, 395, 1407, 1527
MlyI GAGTC 8 cut(s) 406, 897, 920, 936, 1006, 1018, 1085, 1382
MmeI TCCRAC 2 cut(s) 1191, 1593
Mph1103I ATGCAT 2 cut(s) 113, 2661
MroI TCCGGA 1 cut(s) 1781
MroXI GAANNNNTTC 4 cut(s) 869, 1285, 1437, 2551
MslI CAYNNNNRTG 2 cut(s) 76, 1466
MspCI CTTAAG 1 cut(s) 1541
MspI CCGG 3 cut(s) 1491, 1782, 2541
MspR9I CCNGG 1 cut(s) 1491
MunI CAATTG 2 cut(s) 2051, 2826
Mva1269I GAATGC 5 cut(s) 203, 1137, 1552, 1737, 1878
MvnI CGCG 1 cut(s) 2708
MwoI GCNNNNNNNGC 4 cut(s) 231, 1485, 1875, 2053
NciI CCSGG 1 cut(s) 1491
NdeII GATC 8 cut(s) 151, 160, 292, 853, 1181, 1234, 1470, 2021
NlaIV GGNNCC 4 cut(s) 880, 1183, 1261, 1489
NmeAIII GCCGAG 1 cut(s) 1505
NmuCI GTSAC 4 cut(s) 191, 1077, 2129, 2239
NsiI ATGCAT 2 cut(s) 113, 2661
NspI RCATGY 2 cut(s) 679, 2659
PacI TTAATTAA 1 cut(s) 345
PagI TCATGA 1 cut(s) 2668
PciSI GCTCTTC 1 cut(s) 2248
PctI GAATGC 5 cut(s) 203, 1137, 1552, 1737, 1878
PdmI GAANNNNTTC 4 cut(s) 869, 1285, 1437, 2551
PfeI GAWTC 8 cut(s) 104, 502, 1438, 1554, 1656, 1672, 2476, 2582
PflMI CCANNNNNTGG 1 cut(s) 1612
PkrI GCNGC 4 cut(s) 203, 1149, 1817, 2049
PleI GAGTC 8 cut(s) 406, 897, 920, 936, 1005, 1017, 1084, 1381
PpsI GAGTC 8 cut(s) 406, 897, 920, 936, 1005, 1017, 1084, 1381
PshAI GACNNNNGTC 1 cut(s) 2127
PshBI ATTAAT 3 cut(s) 345, 801, 2385
PsiI TTATAA 1 cut(s) 1317
Psp124BI GAGCTC 2 cut(s) 395, 1527
PspEI GGTNACC 2 cut(s) 518, 2558
PspN4I GGNNCC 4 cut(s) 880, 1183, 1261, 1489
PspPI GGNCC 3 cut(s) 775, 878, 1487
PstI CTGCAG 1 cut(s) 1149
PsuI RGATCY 2 cut(s) 151, 1181
RsaI GTAC 1 cut(s) 472
RsaNI GTAC 1 cut(s) 471
RseI CAYNNNNRTG 2 cut(s) 76, 1466
SacI GAGCTC 2 cut(s) 395, 1527
SapI GCTCTTC 1 cut(s) 2248
SatI GCNGC 4 cut(s) 202, 1148, 1816, 2048
Sau3AI GATC 8 cut(s) 151, 160, 292, 853, 1181, 1234, 1470, 2021
Sau96I GGNCC 3 cut(s) 775, 878, 1487
SchI GAGTC 8 cut(s) 406, 897, 920, 936, 1006, 1018, 1085, 1382
ScrFI CCNGG 1 cut(s) 1491
SduI GDGCHC 4 cut(s) 133, 395, 1407, 1527
SfaNI GCATC 2 cut(s) 80, 1159
SfcI CTRYAG 1 cut(s) 1145
SinI GGWCC 1 cut(s) 775
SmiMI CAYNNNNRTG 2 cut(s) 76, 1466
SmlI CTYRAG 3 cut(s) 388, 986, 1541
SmoI CTYRAG 3 cut(s) 388, 986, 1541
SsiI CCGC 4 cut(s) 232, 494, 1926, 2708
SspI AATATT 2 cut(s) 1249, 1861
SspMI CTAG 7 cut(s) 555, 1082, 1119, 1295, 2120, 2190, 2822
SstI GAGCTC 2 cut(s) 395, 1527
StyD4I CCNGG 1 cut(s) 1489
TaaI ACNGT 6 cut(s) 253, 1259, 2044, 2162, 2239, 2245
TaqI TCGA 2 cut(s) 395, 2577
TfiI GAWTC 8 cut(s) 104, 502, 1438, 1554, 1656, 1672, 2476, 2582
TscAI CASTG 7 cut(s) 100, 163, 241, 289, 302, 880, 2049
TseFI GTSAC 4 cut(s) 191, 1077, 2129, 2239
TseI GCWGC 4 cut(s) 201, 1147, 1815, 2047
Tsp45I GTSAC 4 cut(s) 191, 1077, 2129, 2239
TspGWI ACGGA 3 cut(s) 251, 323, 1638
TspRI CASTG 7 cut(s) 100, 163, 241, 289, 302, 880, 2049
Van91I CCANNNNNTGG 1 cut(s) 1612
Vha464I CTTAAG 1 cut(s) 1541
VpaK11BI GGWCC 1 cut(s) 775
VspI ATTAAT 3 cut(s) 345, 801, 2385
XceI RCATGY 2 cut(s) 679, 2659
XmiI GTMKAC 1 cut(s) 15
XmnI GAANNNNTTC 4 cut(s) 869, 1285, 1437, 2551
XspI CTAG 7 cut(s) 555, 1082, 1119, 1295, 2120, 2190, 2822
Zsp2I ATGCAT 2 cut(s) 113, 2661
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.