Rw1G000910

LRR receptor-like serine threonine-protein kinase

Basic Information

Type: gene
Biological Identity
rosa_wichuraiana
Chr1
Physical Location & Seq
Reverse (-)
1298072 .. 1300825
2754 bp
Loading structure...
UTR
Exon/CDS
Intron
Rw1G000910.1

Sequence Viewer

Length: 2754 bp
ATGGATATCTATGTTTACTTCTTGCTCTTGTTATTTTTGGCATCTTCGTGCCTAAACAATTGCAGTGTCGTGGTGGAATCATGCATGGAGGAAGAGAGGCGAGCACTTCTCAGCTTTAAACAAAATCTCACTGGTCCTTCTGGTAAGCTTTCTTCTTGGACTGGTCACGAATGCTGCCAATGGACAGGGATTTCATGCAACAACCGCACTGGTCATGTTGCAACGGTTGACCTCCGTAATACATATCCATACACCACTGGTAAGTGGAACACCACGGAGTATGAAGAATCTTTTTTGGGGGGTAAGTTAATTAATCCTTCTTTGCTTGGCTTGAAACATTTGAGTTACTTAGACTTGAGCTCGAATGATTTTCAAGGGATTCACATTCCCAAGTTTATTGGGGAGCTTACGAGTCTGAGATATCTCAATTTTTCAAGTTTCGAGTATTTGAATTCAGTTGCGGGAGAGATTCCTTCTTCTCTTGGTAACCTCTCAAACTTGAACTATCTTGACCTCAAAGGTTCTGATTATTCTCTTTCTTCCAAAAACTTGAATTGGCTTTCTCATCTCTCTTCCCTAAAATACCTCAATCTTGGAGGTGTGGACCTTAGCAGCACAGGAGTTAGTTGGCTACATGAGGTTAACATGCTTCCTTCACTCTTAGAGTTGCATTTGTCTGGTTGCCTAACTGGTGGAAACCAGCTTCCACTCTCCATCCCTACAATTAACTTCACATCGCTTTTGGTCCTTGATATGTCAGGGAATGGTATTAATTTTTCATATCCTAAATGGATGTTTAATCTTACTAGCCTTACAAAAGTTGATCTGAGTGGGAATTCTTTCAGTGGCCCCTTTCTTGATGAATTTGTAAGACTCCAATCTCTAGAACACCTTGACTTATGGTGTGTAGAACTCAAAGGTCAATTTCCCAAATTTAGTGGAAATTTGTGCAGGCTCAAGTCATTAAGTCTTTCAGGGAGTCAAATTGATGGGGGGATTGAAGAGTTTTTGAGTGGTTTCTCAAATTGTTCATTTAATCGAATGGAGTCACTAGATTTGCAAGGCTGTGGGCTGGTAGGCAAATTGCCTAGTTCATTGGGAATGCTGAGAAGCCTACAGCATCTCGATCTATCTCATAATATTTTCAAAGGCTCCATTCCTCAAAGTTTGGGAAAACTTTCTCAGCTAGTGAGCCTTGATCTATCTTATAATTCATGGGAAGGCAATTTGACCGAAGCCCATTTCATAAATCTCACAAAATTAGAGTCTTTTGCAGTTAGCACAGCCCAACCTGTGCCCCTCATTTTCAATTTGATTGATTATGAATGGATTCCTCCTTTCAAGCTCCACGACATTGTAATGCACAATTGCCGAGTAGGCCCCGGCTTCCCTGTATGGCTTCAATCTCAAACTGAGCTCGTGTTGGTCTCACTTAAGAATACTGGACTCTCGGGTGCAATACCAGAGGAATGGGTCTTTAAGATATCTTCCCAGATCCGAAGGTTGGATTTATCTTCCAATCAAATAAGCGGAAAGCTTCCGTTCCGATTCAACTCTTTTCCGAATCTGGAGTCCATAGTTCTGAGCCATAATCAATTTGATGGCACTATTCCATCATCTATTTGTAGCATTCAATCTCTAAATGAACTTGCTCTGAATAACAATCAGTTATCCGGAGAATTCCCTAAAGAATGGAGTTTGTGGAGCGGCATACAAATTGTGGATGTCTCAAACAACAATATGTCTGGTAATATTCCAAGCTCAATGGGCATTCCAAGTTCTCTTGCAATACTAATGATAGACAACAATCATTTTAGCGGAGAAATTCCTTCTGCCTTGCAAAATTGCTCTTTGGAGAGACTTTATCTTGGAGACAACAAATTTACTGGAAGCATACCTTCTTGGATAGGATCAAAAGTATCCACATTCACAGTGCTGCAATTGCAATCAAACTCTTTAAGTGGACATATTCCTCATCATTTGTGCAGTCTTCCTTTCCTTCACATCCTAGACCTTAGTCACAATAGATTTTCAGGGACTATTCCCAACTGTTTGAATAAATTGACTTCTTTAATCTCTGGAAGTCATAACGGCTGGATGGTCACTGGTGATTTTGAGGTAACAACTGTGACTGTAAAAGGAAGAGCAAGTGAATACTTAGAGAACAATGTGTGGCTTCTAACCATTATTGATTTTTCGCATAATGATTTAGAAGGTGAAATTCCTGAAGAAATCAGCAGTCTCGTTCGATTAGCTACATTAAACTTGTCCATTAATCAATTAAGTGGAAATATCCCCTCAAGAATTGGAAACTTGCACTTGCTTGAAACACTTGACCTCTCCCAGAACCAGCTTTCAGGACAGATTCCACAAAGTCTCGCTTCTCTGACCTTCTTATCTCACTTGAACTTGTCTTGCAACAAGTTGACCGGAAGAATTCCTTCGGGCAACCAACTTCAGACGCTCGATGATTCATCTATTTATAAGGGCAATCCTTCACTCTGTGGATTTCCTCTTTCAAACTGCACAGAAGATGGAGGCAACATGCATGAGACTCATGAAGCTGATGATGAAAAGCTTGGTTTATATACCAGCGCGGTGCTTGGCTTTATCATAGGCTTTTGGAGTGTTTGTGGCACATTGATATTGAAGAAGTCATGGAGGTATGCTTATTTTCAATTTTTTGACCACATCAAAGAGAAAGTAGCACTAGCAATTGCATTGAAAGTAGCTCGTTTGAAAGCAAGGCAGTGA

Protein Analysis

917

Amino Acids

101.33

Weight (kDa)

5.74

Isoelectric Point (pI)

38.14

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
LRRNT_2 PF08263 30 - 67 8.5e-12 Leucine rich repeat N-terminal domain
LRR_14 PF23598 180 - 329 1.9e-07 Leucine-rich repeat region
LRR_8 PF13855 348 - 404 2.5e-06 Leucine rich repeat
LRR_14 PF23598 361 - 478 2.1e-07 Leucine-rich repeat region
LRR_8 PF13855 498 - 557 3.7e-06 Leucine rich repeat
LRR_14 PF23598 501 - 677 6.3e-06 Leucine-rich repeat region
LRR_14 PF23598 736 - 827 3.3e-08 Leucine-rich repeat region
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready

Orthologous Genes (Group: OG0000048)

Species Orthologous Gene IDs
arabidopsis_thaliana AT2G34930
fragaria_vesca FvH4_3g12670 FvH4_3g12672 FvH4_3g12740 FvH4_3g12742 FvH4_3g12770 FvH4_3g12770 FvH4_3g12860 FvH4_3g12890 FvH4_3g13431 FvH4_3g13433 FvH4_3g13435 FvH4_3g13470 FvH4_3g13470 FvH4_3g13480 FvH4_3g13562 FvH4_3g13580 FvH4_3g13600 FvH4_3g13600 FvH4_3g13600 FvH4_3g13600 FvH4_3g13600 FvH4_3g13600 FvH4_3g13610 FvH4_3g13620 FvH4_3g13620 FvH4_3g23240 FvH4_3g32910 FvH4_3g35070 FvH4_3g45520 FvH4_5g08430 FvH4_5g08450 FvH4_6g53230 FvH4_6g53300
malus_domestica MD05G1217600.v1.1 MD05G1217700.v1.1 MD05G1224700.v1.1 MD05G1225100.v1.1 MD05G1225300.v1.1 MD05G1225400.v1.1 MD05G1235900.v1.1 MD05G1236100.v1.1 MD05G1236300.v1.1 MD05G1237200.v1.1 MD05G1241600.v1.1 MD05G1245700.v1.1 MD05G1245800.v1.1 MD05G1245900.v1.1 MD05G1246000.v1.1 MD05G1246100.v1.1 MD05G1246300.v1.1 MD05G1246400.v1.1 MD05G1246500.v1.1 MD05G1248100.v1.1 MD05G1248200.v1.1 MD05G1264300.v1.1 MD05G1275900.v1.1 MD07G1051400.v1.1 MD09G1012600.v1.1 MD09G1012700.v1.1 MD09G1012800.v1.1 MD10G1221400.v1.1 MD10G1221500.v1.1 MD10G1221600.v1.1 MD10G1221900.v1.1 MD10G1222200.v1.1 MD10G1222400.v1.1 MD10G1222500.v1.1 MD10G1222900.v1.1 MD10G1223000.v1.1 MD10G1223100.v1.1 MD10G1223500.v1.1 MD10G1228000.v1.1 MD12G1019600.v1.1 MD12G1020000.v1.1 MD12G1020100.v1.1 MD17G1013200.v1.1 MD17G1013300.v1.1 MD17G1013400.v1.1
prunus_persica Prupe.1G060500_v2.0.a1 Prupe.1G100100_v2.0.a1 Prupe.3G124000_v2.0.a1 Prupe.3G304400_v2.0.a1 Prupe.4G116800_v2.0.a1 Prupe.4G116900_v2.0.a1 Prupe.4G117000_v2.0.a1 Prupe.4G121800_v2.0.a1 Prupe.4G121900_v2.0.a1 Prupe.4G122000_v2.0.a1 Prupe.4G122100_v2.0.a1 Prupe.4G122200_v2.0.a1 Prupe.4G122300_v2.0.a1 Prupe.4G122500_v2.0.a1 Prupe.4G122600_v2.0.a1 Prupe.4G122800_v2.0.a1 Prupe.4G122900_v2.0.a1 Prupe.4G123000_v2.0.a1 Prupe.4G123100_v2.0.a1 Prupe.4G123200_v2.0.a1 Prupe.4G131500_v2.0.a1 Prupe.4G131600_v2.0.a1 Prupe.7G032500_v2.0.a1 Prupe.7G032900_v2.0.a1 Prupe.7G033000_v2.0.a1 Prupe.7G033100_v2.0.a1 Prupe.7G033300_v2.0.a1 Prupe.7G033600_v2.0.a1 Prupe.7G034600_v2.0.a1 Prupe.7G040200_v2.0.a1 Prupe.7G059200_v2.0.a1
pyrus_communis pycom05g20580 pycom05g20590 pycom05g20760 pycom05g20800 pycom05g21280 pycom05g21290 pycom05g21820 pycom05g21830 pycom05g22180 pycom05g22190 pycom05g22210 pycom05g22450 pycom05g22460 pycom05g22470 pycom05g22480 pycom05g22490 pycom05g23770 pycom05g23780 pycom05g24050 pycom05g24060 pycom07g03910 pycom10g18700 pycom10g18720 pycom10g18730 pycom10g18740 pycom10g19150 pycom111g01060 pycom12g01660 pycom12g01690 pycom12g01720 pycom12g01740 pycom12g01750 pycom12g01770 pycom12g01810 pycom12g01820 pycom12g01830 pycom12g01840 pycom12g01870 pycom12g01900 pycom17g01060 pycom17g01070
rosa_chinensis RchiOBHm_Chr1g0315041 RchiOBHm_Chr1g0315051 RchiOBHm_Chr1g0315071 RchiOBHm_Chr1g0315161 RchiOBHm_Chr1g0315211 RchiOBHm_Chr1g0315251 RchiOBHm_Chr1g0315321 RchiOBHm_Chr1g0315391 RchiOBHm_Chr1g0315451 RchiOBHm_Chr1g0315481 RchiOBHm_Chr1g0315551 RchiOBHm_Chr1g0315601 RchiOBHm_Chr1g0315621 RchiOBHm_Chr1g0359221 RchiOBHm_Chr2g0142981 RchiOBHm_Chr2g0143001 RchiOBHm_Chr2g0143061 RchiOBHm_Chr2g0143091 RchiOBHm_Chr2g0175321 RchiOBHm_Chr2g0175341 RchiOBHm_Chr2g0175361 RchiOBHm_Chr2g0175371 RchiOBHm_Chr3g0470491 RchiOBHm_Chr3g0480881 RchiOBHm_Chr3g0485511 RchiOBHm_Chr5g0020741 RchiOBHm_Chr5g0020901 RchiOBHm_Chr5g0020931 RchiOBHm_Chr5g0020941 RchiOBHm_Chr5g0020961 RchiOBHm_Chr5g0020971 RchiOBHm_Chr5g0021451 RchiOBHm_Chr5g0021531 RchiOBHm_Chr5g0021831 RchiOBHm_Chr5g0021841 RchiOBHm_Chr5g0021931 RchiOBHm_Chr5g0021941 RchiOBHm_Chr5g0021981 RchiOBHm_Chr5g0021991 RchiOBHm_Chr5g0022011 RchiOBHm_Chr5g0022181 RchiOBHm_Chr5g0022191 RchiOBHm_Chr5g0022211 RchiOBHm_Chr5g0022221 RchiOBHm_Chr5g0022231 RchiOBHm_Chr5g0022291 RchiOBHm_Chr5g0022301 RchiOBHm_Chr5g0022331 RchiOBHm_Chr5g0022361 RchiOBHm_Chr5g0022371 RchiOBHm_Chr5g0022381 RchiOBHm_Chr5g0022401 RchiOBHm_Chr5g0022431 RchiOBHm_Chr5g0022451 RchiOBHm_Chr5g0022541 RchiOBHm_Chr5g0022591 RchiOBHm_Chr5g0022601 RchiOBHm_Chr5g0022701 RchiOBHm_Chr5g0022741 RchiOBHm_Chr5g0022791 RchiOBHm_Chr5g0022811 RchiOBHm_Chr5g0022851 RchiOBHm_Chr5g0029441 RchiOBHm_Chr5g0041631 RchiOBHm_Chr5g0069391 RchiOBHm_Chr6g0273811 RchiOBHm_Chr6g0273831 RchiOBHm_Chr6g0275331 RchiOBHm_Chr7g0219061
rosa_laevigata RLG00000002463 RLG00000020007 RLG00000020008 RLG00000022320 RLG00000022321 RLG00000023446 RLG00000030742 RLG00000030743 RLG00000030747 RLG00000032557 RLG00000032564 RLG00000032571 RLG00000032573 RLG00000032574 RLG00000032612 RLG00000032633 RLG00000032636 RLG00000032638 RLG00000032650 RLG00000032651 RLG00000032652 RLG00000032653 RLG00000032655 RLG00000032673 RLG00000032678 RLG00000032769 RLG00000032857 RLG00000033168 RLG00000033465 RLG00000034086 RLG00000034222 RLG00000035290
rosa_multiflora Rmu_co8143358.1_g000001 Rmu_co8518791.1_g000001 Rmu_sc0000178.1_g000008 Rmu_sc0000178.1_g000014 Rmu_sc0000401.1_g000005 Rmu_sc0000401.1_g000013 Rmu_sc0000401.1_g000017 Rmu_sc0000401.1_g000018 Rmu_sc0000401.1_g000024 Rmu_sc0000401.1_g000025 Rmu_sc0000576.1_g000020 Rmu_sc0001585.1_g000003 Rmu_sc0001585.1_g000005 Rmu_sc0001585.1_g000008 Rmu_sc0001784.1_g000006 Rmu_sc0001784.1_g000011 Rmu_sc0001784.1_g000022 Rmu_sc0001784.1_g000028 Rmu_sc0002052.1_g000004 Rmu_sc0002052.1_g000011 Rmu_sc0002277.1_g000003 Rmu_sc0002277.1_g000006 Rmu_sc0002277.1_g000024 Rmu_sc0002658.1_g000012 Rmu_sc0003512.1_g000004 Rmu_sc0003512.1_g000007 Rmu_sc0004180.1_g000016 Rmu_sc0004180.1_g000029 Rmu_sc0004180.1_g000034 Rmu_sc0005639.1_g000008 Rmu_sc0005639.1_g000023 Rmu_sc0006070.1_g000016 Rmu_sc0006070.1_g000017 Rmu_sc0006966.1_g000021 Rmu_sc0006966.1_g000023 Rmu_sc0007239.1_g000003 Rmu_sc0008460.1_g000010 Rmu_sc0009984.1_g000008 Rmu_sc0010181.1_g000005 Rmu_sc0010181.1_g000010 Rmu_sc0010503.1_g000006 Rmu_sc0011646.1_g000003 Rmu_sc0012984.1_g000011 Rmu_sc0016972.1_g000005 Rmu_sc0016972.1_g000008 Rmu_sc0023070.1_g000003 Rmu_sc0025660.1_g000001 Rmu_ssc0000322.1_g000019
rosa_roxburghii Rroxscaffold_1G00038860 Rroxscaffold_1G00053490 Rroxscaffold_1G00053500 Rroxscaffold_1G00054230 Rroxscaffold_1G00056460 Rroxscaffold_1G00056470 Rroxscaffold_1G00056480 Rroxscaffold_1G00056500 Rroxscaffold_1G00056510 Rroxscaffold_1G00056620 Rroxscaffold_1G00056690 Rroxscaffold_1G00056710 Rroxscaffold_1G00056720 Rroxscaffold_1G00056730 Rroxscaffold_1G00056740 Rroxscaffold_1G00056750 Rroxscaffold_1G00056760 Rroxscaffold_1G00056870 Rroxscaffold_1G00056900 Rroxscaffold_1G00057120 Rroxscaffold_1G00057560 Rroxscaffold_2G00077430 Rroxscaffold_2G00102160 Rroxscaffold_3G00231420 Rroxscaffold_3G00231430 Rroxscaffold_4G00297230 Rroxscaffold_4G00331570 Rroxscaffold_6G00396700 Rroxscaffold_6G00400940 Rroxscaffold_7G00192740
rosa_rugosa Rorug01G0004400 Rorug01G0004500 Rorug02G0377600 Rorug02G0378000 Rorug02G0582800 Rorug02G0583400 Rorug03G0187000 Rorug03G0218800 Rorug04G0081200 Rorug05G0062700 Rorug05G0062700 Rorug05G0063100 Rorug05G0063200 Rorug05G0063200 Rorug05G0063200 Rorug05G0067000 Rorug05G0069700 Rorug05G0069900 Rorug05G0070000 Rorug05G0070100 Rorug05G0070300 Rorug05G0070400 Rorug05G0070600 Rorug05G0070600 Rorug05G0072300 Rorug05G0072400 Rorug05G0072500 Rorug05G0072500 Rorug05G0072600.1 Rorug05G0072700 Rorug05G0072800 Rorug05G0072800 Rorug05G0072900 Rorug05G0073000 Rorug05G0073000 Rorug05G0073400 Rorug05G0073400 Rorug05G0073400 Rorug05G0074800 Rorug05G0075000 Rorug05G0114300 Rorug05G0194200 Rorug06G0097800
rosa_samantha Rh2AG401400 Rh2CG387600 Rh2CG417000 Rh2CG637400 Rh5CG169600 Rh5CG172100 Rh5CG175200 Rh5CG317100 Rh6DG187900
rosa_wichuraiana Rw1G000750 Rw1G000790 Rw1G000820 Rw1G000860 Rw1G000880 Rw1G000910 Rw2G035180 Rw2G035200 Rw2G035240 Rw2G054370 Rw2G054380 Rw5G013570 Rw5G013580 Rw5G013590 Rw5G013910 Rw5G013980 Rw5G014110 Rw5G014120 Rw5G014280 Rw5G014310 Rw5G014400 Rw5G014420 Rw5G014440 Rw5G014460 Rw5G014480 Rw5G014500 Rw5G014520 Rw5G014530 Rw5G042390

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 2 cut(s) 1209, 2484
AccBSI CCGCTC 1 cut(s) 1707
AccII CGCG 1 cut(s) 2597
AccIII TCCGGA 1 cut(s) 1673
AciI CCGC 6 cut(s) 205, 461, 1530, 1707, 1818, 2597
AclWI GGATC 2 cut(s) 1489, 1918
AcuI CTGAAG 2 cut(s) 2247, 2441
AdeI CACNNNGTG 1 cut(s) 2504
AfiI CCNNNNNNNGG 1 cut(s) 1504
AflII CTTAAG 1 cut(s) 1433
Alw21I GWGCWC 3 cut(s) 106, 362, 1419
Alw26I GTCTC 7 cut(s) 1432, 1732, 1852, 1866, 2246, 2381, 2546
AlwI GGATC 2 cut(s) 1489, 1918
Ama87I CYCGRG 1 cut(s) 1450
Aor13HI TCCGGA 1 cut(s) 1673
AoxI GGCC 2 cut(s) 847, 1378
ApeKI GCWGC 3 cut(s) 174, 612, 1936
ArsI GACNNNNNNTTYG 4 cut(s) 1250, 1282, 1556, 1588
AseI ATTAAT 3 cut(s) 312, 771, 2274
Asp700I GAANNNNTTC 4 cut(s) 839, 1177, 1329, 2440
AspLEI GCGC 1 cut(s) 2597
AspS9I GGNCC 5 cut(s) 134, 604, 745, 848, 1379
AsuC2I CCSGG 1 cut(s) 1383
AsuHPI GGTGA 2 cut(s) 2120, 2228
AvaI CYCGRG 1 cut(s) 1450
AvaII GGWCC 3 cut(s) 134, 604, 745
BaeGI GKGCMC 1 cut(s) 1299
BanII GRGCYC 2 cut(s) 362, 1419
BarI GAAGNNNNNNTAC 2 cut(s) 136, 168
BauI CACGAG 1 cut(s) 1418
BbsI GAAGAC 1 cut(s) 1982
Bbv12I GWGCWC 3 cut(s) 106, 362, 1419
BbvI GCAGC 3 cut(s) 161, 624, 1923
BccI CCATC 6 cut(s) 722, 983, 1595, 1621, 2092, 2528
BceAI ACGGC 1 cut(s) 2107
BciVI GTATCC 1 cut(s) 1930
BcnI CCSGG 1 cut(s) 1383
BcoDI GTCTC 7 cut(s) 1432, 1732, 1852, 1866, 2246, 2381, 2546
BfaI CTAG 7 cut(s) 807, 884, 1052, 1089, 1187, 2009, 2711
BfmI CTRYAG 1 cut(s) 1115
BfrI CTTAAG 1 cut(s) 1433
BfuI GTATCC 1 cut(s) 1930
BglI GCCNNNNNGGC 1 cut(s) 1377
BisI GCNGC 4 cut(s) 175, 613, 1708, 1937
BlsI GCNGC 4 cut(s) 176, 614, 1709, 1938
Bme1390I CCNGG 1 cut(s) 1383
Bme18I GGWCC 3 cut(s) 134, 604, 745
BmeT110I CYCGRG 1 cut(s) 1450
BmgT120I GGNCC 5 cut(s) 134, 604, 745, 848, 1379
BmiI GGNNCC 3 cut(s) 850, 1153, 1381
BmrFI CCNGG 1 cut(s) 1383
BmsI GCATC 2 cut(s) 50, 1129
BoxI GACNNNNGTC 1 cut(s) 2016
BpiI GAAGAC 1 cut(s) 1982
BplI GAGNNNNNCTC 2 cut(s) 93, 125
BpmI CTGGAG 1 cut(s) 1589
Bpu10I CCTNAGC 1 cut(s) 608
BpuEI CTTGAG 3 cut(s) 376, 941, 2284
BpuMI CCSGG 1 cut(s) 1383
BsaI GGTCTC 1 cut(s) 1432
BsaJI CCNNGG 2 cut(s) 273, 1381
BsaWI WCCGGW 2 cut(s) 1673, 2429
BsaXI ACNNNNNCTCC 2 cut(s) 2617, 2647
Bsc4I CCNNNNNNNGG 1 cut(s) 1504
Bse1I ACTGG 8 cut(s) 136, 166, 214, 262, 694, 1447, 1891, 2110
BseAI TCCGGA 1 cut(s) 1673
BseDI CCNNGG 2 cut(s) 273, 1381
BseGI GGATG 5 cut(s) 714, 798, 1729, 2004, 2103
BseLI CCNNNNNNNGG 1 cut(s) 1504
BseMII CTCAG 7 cut(s) 124, 407, 818, 1097, 1196, 1404, 1574
BseNI ACTGG 8 cut(s) 136, 166, 214, 262, 694, 1447, 1891, 2110
BseSI GKGCMC 1 cut(s) 1299
BseXI GCAGC 3 cut(s) 161, 624, 1923
BsgI GTGCAG 3 cut(s) 970, 2005, 2509
Bsh1236I CGCG 1 cut(s) 2597
BshFI GGCC 2 cut(s) 849, 1380
BsiHKAI GWGCWC 3 cut(s) 106, 362, 1419
BsiHKCI CYCGRG 1 cut(s) 1450
BsiSI CCGG 3 cut(s) 1383, 1674, 2430
BslFI GGGAC 1 cut(s) 2050
BslI CCNNNNNNNGG 1 cut(s) 1504
BsmAI GTCTC 7 cut(s) 1432, 1732, 1852, 1866, 2246, 2381, 2546
BsmFI GGGAC 1 cut(s) 2050
BsmI GAATGC 4 cut(s) 176, 1107, 1629, 1770
BsnI GGCC 2 cut(s) 849, 1380
Bso31I GGTCTC 1 cut(s) 1432
BsoBI CYCGRG 1 cut(s) 1450
Bsp1286I GDGCHC 4 cut(s) 106, 362, 1299, 1419
Bsp13I TCCGGA 1 cut(s) 1673
Bsp143I GATC 5 cut(s) 823, 1126, 1198, 1494, 1910
BspACI CCGC 6 cut(s) 205, 461, 1530, 1707, 1818, 2597
BspANI GGCC 2 cut(s) 849, 1380
BspCNI CTCAG 7 cut(s) 123, 408, 819, 1098, 1195, 1405, 1575
BspEI TCCGGA 1 cut(s) 1673
BspFNI CGCG 1 cut(s) 2597
BspHI TCATGA 1 cut(s) 2557
BspLI GGNNCC 3 cut(s) 850, 1153, 1381
BspPI GGATC 2 cut(s) 1489, 1918
BspQI GCTCTTC 1 cut(s) 2137
BspTI CTTAAG 1 cut(s) 1433
BspTNI GGTCTC 1 cut(s) 1432
BsrBI CCGCTC 1 cut(s) 1707
BsrI ACTGG 8 cut(s) 136, 166, 214, 262, 694, 1447, 1891, 2110
BssECI CCNNGG 2 cut(s) 273, 1381
BssMI GATC 5 cut(s) 823, 1126, 1198, 1494, 1910
BssSI CACGAG 1 cut(s) 1418
Bst2BI CACGAG 1 cut(s) 1418
Bst4CI ACNGT 5 cut(s) 226, 1933, 2051, 2128, 2134
Bst6I CTCTTC 4 cut(s) 87, 577, 996, 2137
BstAFI CTTAAG 1 cut(s) 1433
BstC8I GCNNGC 2 cut(s) 102, 953
BstDSI CCRYGG 1 cut(s) 273
BstEII GGTNACC 1 cut(s) 485
BstF5I GGATG 5 cut(s) 714, 798, 1729, 2004, 2103
BstFNI CGCG 1 cut(s) 2597
BstHHI GCGC 1 cut(s) 2597
BstKTI GATC 5 cut(s) 826, 1129, 1201, 1497, 1913
BstMAI GTCTC 7 cut(s) 1432, 1732, 1852, 1866, 2246, 2381, 2546
BstMBI GATC 5 cut(s) 823, 1126, 1198, 1494, 1910
BstMWI GCNNNNNNNGC 4 cut(s) 204, 1377, 1767, 1942
BstNSI RCATGY 2 cut(s) 649, 2548
BstPAI GACNNNNGTC 1 cut(s) 2016
BstPI GGTNACC 1 cut(s) 485
BstSCI CCNGG 1 cut(s) 1381
BstSFI CTRYAG 1 cut(s) 1115
BstSLI GKGCMC 1 cut(s) 1299
BstUI CGCG 1 cut(s) 2597
BstV1I GCAGC 3 cut(s) 161, 624, 1923
BstV2I GAAGAC 1 cut(s) 1982
BstX2I RGATCY 1 cut(s) 1494
BstXI CCANNNNNNTGG 1 cut(s) 1470
BstYI RGATCY 1 cut(s) 1494
BsuI GTATCC 1 cut(s) 1930
BsuRI GGCC 2 cut(s) 849, 1380
BtgI CCRYGG 1 cut(s) 273
BtgZI GCGATG 1 cut(s) 720
BtsCI GGATG 5 cut(s) 714, 798, 1729, 2004, 2103
BtsI GCAGTG 1 cut(s) 70
BtsIMutI CAGTG 7 cut(s) 70, 129, 207, 255, 850, 1938, 2103
Cac8I GCNNGC 2 cut(s) 102, 953
CciI TCATGA 1 cut(s) 2557
CfoI GCGC 1 cut(s) 2597
Cfr13I GGNCC 5 cut(s) 134, 604, 745, 848, 1379
CseI GACGC 1 cut(s) 2470
CspCI CAANNNNNGTGG 2 cut(s) 919, 954
DpnI GATC 5 cut(s) 825, 1128, 1200, 1496, 1912
DpnII GATC 5 cut(s) 823, 1126, 1198, 1494, 1910
DraI TTTAAA 1 cut(s) 118
DraIII CACNNNGTG 1 cut(s) 2504
Eam1104I CTCTTC 4 cut(s) 87, 577, 996, 2137
EarI CTCTTC 4 cut(s) 87, 577, 996, 2137
Ecl136II GAGCTC 2 cut(s) 360, 1417
Eco24I GRGCYC 2 cut(s) 362, 1419
Eco31I GGTCTC 1 cut(s) 1432
Eco32I GATATC 3 cut(s) 7, 422, 1485
Eco47I GGWCC 3 cut(s) 134, 604, 745
Eco53kI GAGCTC 2 cut(s) 360, 1417
Eco57I CTGAAG 2 cut(s) 2247, 2441
Eco88I CYCGRG 1 cut(s) 1450
Eco91I GGTNACC 1 cut(s) 485
EcoICRI GAGCTC 2 cut(s) 360, 1417
EcoO109I RGGNCCY 1 cut(s) 1379
EcoO65I GGTNACC 1 cut(s) 485
EcoRI GAATTC 4 cut(s) 451, 835, 1679, 2436
EcoRV GATATC 3 cut(s) 7, 422, 1485
EcoT22I ATGCAT 2 cut(s) 86, 2550
EcoT38I GRGCYC 2 cut(s) 362, 1419
FalI AAGNNNNNCTT 6 cut(s) 1882, 1914, 2365, 2397, 2425, 2457
FaqI GGGAC 1 cut(s) 2050
FauI CCCGC 1 cut(s) 454
Fnu4HI GCNGC 4 cut(s) 175, 613, 1708, 1937
FokI GGATG 5 cut(s) 701, 805, 1736, 1991, 2110
FriOI GRGCYC 2 cut(s) 362, 1419
Fsp4HI GCNGC 4 cut(s) 175, 613, 1708, 1937
FspBI CTAG 7 cut(s) 807, 884, 1052, 1089, 1187, 2009, 2711
GlaI GCGC 1 cut(s) 2596
GluI GCNGC 4 cut(s) 175, 613, 1708, 1937
GsuI CTGGAG 1 cut(s) 1589
HaeIII GGCC 2 cut(s) 849, 1380
HapII CCGG 3 cut(s) 1383, 1674, 2430
HgaI GACGC 1 cut(s) 2470
HhaI GCGC 1 cut(s) 2597
Hin6I GCGC 1 cut(s) 2595
HinP1I GCGC 1 cut(s) 2595
HincII GTYRAC 3 cut(s) 229, 643, 2427
HindII GTYRAC 3 cut(s) 229, 643, 2427
HindIII AAGCTT 3 cut(s) 146, 1535, 2576
HpaI GTTAAC 1 cut(s) 643
HpaII CCGG 3 cut(s) 1383, 1674, 2430
HphI GGTGA 2 cut(s) 2120, 2228
Hpy166II GTNNAC 6 cut(s) 16, 229, 604, 643, 1964, 2427
Hpy8I GTNNAC 6 cut(s) 16, 229, 604, 643, 1964, 2427
HpyCH4III ACNGT 5 cut(s) 226, 1933, 2051, 2128, 2134
HpyF10VI GCNNNNNNNGC 4 cut(s) 204, 1377, 1767, 1942
HspAI GCGC 1 cut(s) 2595
Kpn2I TCCGGA 1 cut(s) 1673
KspAI GTTAAC 1 cut(s) 643
Kzo9I GATC 5 cut(s) 823, 1126, 1198, 1494, 1910
LguI GCTCTTC 1 cut(s) 2137
LmnI GCTCC 4 cut(s) 403, 1157, 1350, 1704
Lsp1109I GCAGC 3 cut(s) 161, 624, 1923
LweI GCATC 2 cut(s) 50, 1129
MaeI CTAG 7 cut(s) 807, 884, 1052, 1089, 1187, 2009, 2711
MaeIII GTNAC 8 cut(s) 164, 344, 485, 1047, 2018, 2101, 2119, 2128
MalI GATC 5 cut(s) 825, 1128, 1200, 1496, 1912
MbiI CCGCTC 1 cut(s) 1707
MboI GATC 5 cut(s) 823, 1126, 1198, 1494, 1910
MfeI CAATTG 4 cut(s) 58, 1366, 1940, 2715
MflI RGATCY 1 cut(s) 1494
MhlI GDGCHC 4 cut(s) 106, 362, 1299, 1419
MlyI GAGTC 8 cut(s) 421, 867, 988, 1055, 1274, 1440, 1580, 2548
MmeI TCCRAC 1 cut(s) 1485
Mph1103I ATGCAT 2 cut(s) 86, 2550
MroI TCCGGA 1 cut(s) 1673
MroXI GAANNNNTTC 4 cut(s) 839, 1177, 1329, 2440
MslI CAYNNNNRTG 2 cut(s) 46, 1358
MspCI CTTAAG 1 cut(s) 1433
MspI CCGG 3 cut(s) 1383, 1674, 2430
MspR9I CCNGG 1 cut(s) 1383
MunI CAATTG 4 cut(s) 58, 1366, 1940, 2715
Mva1269I GAATGC 4 cut(s) 176, 1107, 1629, 1770
MvnI CGCG 1 cut(s) 2597
MwoI GCNNNNNNNGC 4 cut(s) 204, 1377, 1767, 1942
NciI CCSGG 1 cut(s) 1383
NdeII GATC 5 cut(s) 823, 1126, 1198, 1494, 1910
NlaIV GGNNCC 3 cut(s) 850, 1153, 1381
NmeAIII GCCGAG 1 cut(s) 1397
NmuCI GTSAC 5 cut(s) 164, 1047, 2018, 2101, 2128
NsiI ATGCAT 2 cut(s) 86, 2550
NspI RCATGY 2 cut(s) 649, 2548
PacI TTAATTAA 1 cut(s) 312
PagI TCATGA 1 cut(s) 2557
PciSI GCTCTTC 1 cut(s) 2137
PctI GAATGC 4 cut(s) 176, 1107, 1629, 1770
PdmI GAANNNNTTC 4 cut(s) 839, 1177, 1329, 2440
PfeI GAWTC 9 cut(s) 77, 287, 379, 469, 1330, 1548, 1564, 2365, 2471
PkrI GCNGC 4 cut(s) 176, 614, 1709, 1938
PleI GAGTC 8 cut(s) 420, 867, 987, 1054, 1273, 1440, 1579, 2548
PpsI GAGTC 8 cut(s) 420, 867, 987, 1054, 1273, 1440, 1579, 2548
PshAI GACNNNNGTC 1 cut(s) 2016
PshBI ATTAAT 3 cut(s) 312, 771, 2274
PsiI TTATAA 2 cut(s) 1209, 2484
Psp124BI GAGCTC 2 cut(s) 362, 1419
PspEI GGTNACC 1 cut(s) 485
PspN4I GGNNCC 3 cut(s) 850, 1153, 1381
PspPI GGNCC 5 cut(s) 134, 604, 745, 848, 1379
PsuI RGATCY 1 cut(s) 1494
RseI CAYNNNNRTG 2 cut(s) 46, 1358
SacI GAGCTC 2 cut(s) 362, 1419
SapI GCTCTTC 1 cut(s) 2137
SatI GCNGC 4 cut(s) 175, 613, 1708, 1937
Sau3AI GATC 5 cut(s) 823, 1126, 1198, 1494, 1910
Sau96I GGNCC 5 cut(s) 134, 604, 745, 848, 1379
SchI GAGTC 8 cut(s) 421, 867, 988, 1055, 1274, 1440, 1580, 2548
ScrFI CCNGG 1 cut(s) 1383
SduI GDGCHC 4 cut(s) 106, 362, 1299, 1419
SfaNI GCATC 2 cut(s) 50, 1129
SfcI CTRYAG 1 cut(s) 1115
SinI GGWCC 3 cut(s) 134, 604, 745
SmiMI CAYNNNNRTG 2 cut(s) 46, 1358
SmlI CTYRAG 4 cut(s) 355, 956, 1433, 2299
SmoI CTYRAG 4 cut(s) 355, 956, 1433, 2299
SsiI CCGC 6 cut(s) 205, 461, 1530, 1707, 1818, 2597
SspI AATATT 2 cut(s) 1141, 1753
SspMI CTAG 7 cut(s) 807, 884, 1052, 1089, 1187, 2009, 2711
SstI GAGCTC 2 cut(s) 362, 1419
StyD4I CCNGG 1 cut(s) 1381
TaaI ACNGT 5 cut(s) 226, 1933, 2051, 2128, 2134
TaqI TCGA 6 cut(s) 362, 441, 1039, 1125, 2248, 2466
TaqII GACCGA 1 cut(s) 1247
TauI GCSGC 1 cut(s) 1710
TfiI GAWTC 9 cut(s) 77, 287, 379, 469, 1330, 1548, 1564, 2365, 2471
TscAI CASTG 7 cut(s) 70, 136, 214, 262, 850, 1938, 2110
TseFI GTSAC 5 cut(s) 164, 1047, 2018, 2101, 2128
TseI GCWGC 3 cut(s) 174, 612, 1936
Tsp45I GTSAC 5 cut(s) 164, 1047, 2018, 2101, 2128
TspGWI ACGGA 3 cut(s) 224, 290, 1530
TspRI CASTG 7 cut(s) 70, 136, 214, 262, 850, 1938, 2110
Vha464I CTTAAG 1 cut(s) 1433
VpaK11BI GGWCC 3 cut(s) 134, 604, 745
VspI ATTAAT 3 cut(s) 312, 771, 2274
XbaI TCTAGA 1 cut(s) 883
XceI RCATGY 2 cut(s) 649, 2548
XmnI GAANNNNTTC 4 cut(s) 839, 1177, 1329, 2440
XspI CTAG 7 cut(s) 807, 884, 1052, 1089, 1187, 2009, 2711
Zsp2I ATGCAT 2 cut(s) 86, 2550
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.