Basic Information

Type: gene

Biological Identity

Species

rosa_wichuraiana

Chromosome

Chr5

Orthogroup ID

OG0000048

Physical Location & Seq

Genomic Coordinates Reverse (-)

17320728 .. 17323706

Gene Structure 2979 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Rw5G014420.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 2979 bp

ATGGATAGCTTCTGTGCAAACCTATTCAAGCCTACCAGCTATCGCTTCCTTGTCAAAAATGTTGCTCACTACTTGCTCTTTGTTATTCTGGCATCTTCATATCTGCACACTACTAAACTGTGTGTGGGAGATGGACTTCCGAGTGGTGTGAGATCATCATCATGCATCGAGGAAGAGAGACGAGCGCTTCTCAGCTTCAAAGGAGATGTTACTGATCGTTCGGGTAGGCTTTCTTCTTGGGTGGGTCAGGATTGCTGCCGATGGAAAGGGATTTCGTGCAACAACCGTACAGGTCATGTTGCAAGGATGGACCTCCGAAACCTGAATTATGATCAAGGCTCCTACGGAGATACTTCTTTGGGGGGTAAGATTAATCCTTCTTTGCTTAGCTTTAAGAACTTACGTTACCTTGATCTAAGCGGAAACGATTTTCAAGGATGTCGAATTCCTAACTTCTTTGGGAAGCTTCAAAGTTTGAGGTATCTCAATCTCTCATATACATTTGTGGGAGAGATTCCCCCAGCTCTTGGTAACCTCTCAAACTTGAACTATCTTGACCTCAGTTCTGATTCTTACAGTTTTGTTTCTTCCAAAAACTTGAATTGGCTTTCTCATCTCTCTTCCCTAAAGTACCTCAATCTGGGAGGTGTGAACCTTAGCAGCACAGGAGTGAGTTGGCTACATGATGTCAACATGCTTCCTTCACTCTTAGAGTTGCATTTGTCTGTTTGCCAAATTCAAAACCTTCCACACTCCCAGCTTCCGTCGGTGAACTTCACATCCCTATTGGTTCTTGATATATCAGGGAATGATATTAATTCTTCATTTCCCAGCTGGTTTTTTAATCTTACCAACCTCAAAAGACTTGATGCATCTTCCAATTTGTTCGGGCCCTTCCCTGTTGAATTTGCAAACCTCAAGTCTTTGGAAGACCTTGGTTTGAGTTCTAATGAGCTCGAAGGTCAGATTCCCCAAGTCATTGGTACTTTGTGCAGCCTAAGGATATTAGATCTTTCGGGGAACTCATTCTATGGTAGTTTGGAAATTTTTTTGAATGGTTTCTCAAATGGTACAAGTTATAGATTAGGACTGCTGGAAAATCTGAAGGAACTTGACCTCGGTGGGAACCTAGTTTCTGGTTCAATTCCACAATCTATTAGTAATTTATCATCATTGGAAAAACTGGACATCTCTGGTAATCATCTTAATGAGTCCATTCCTGAAAGTTTGGGACAACTCTCTCAGCTAGTTCACCTCGATCTATCTGATAATCCGTTGGAAGGCAATCTAAATGAAGCCCATTTCCGAACTCTCACAAAGTTGGAGTCTTTTGCAGTCTGTAGCAAATACGGGCTCATGACTGGGTCCCTCATTTTTAACATGGCTCATGACTGGGTTCCTCCTTTCCAACTTAATTCAATCGACATTGCCGACTGCAGAGTAGGTCCTGCCTTTGGGGTATGGCTTCAGTCTCAAACTGAATTAACGGAAGTCACGCTTCGTAATACTTCAATCTCAGATTTCATATCAGAGGAATGGTTCTTGAAGATATCTTTCCAGCTCACATCATTGGATTTATCTTATAACCAAGTCCGTGGAAAGCTTCCATTGCACATGAACTCCCCATCTTTGAGGTACATAGATTTGAGACATAATCAATTTGAAGGCCCTCTCCCACATTGGTCTAGTGATGCTGCCACCTATCTCCATCTTCAAAGCAATTTATTTTCCGGGCCGATTCCCTCAAATTTTGATCAATTGCTGCCTAACTTGGCAACAGTGGATCTATCTGACAATCATCTGAATGGTAGGATACCACCCTCTGTGTGCAACTTGTCAGATTTGTCAGTTCTTCTGTTAAGAAGCAATCGCTTGACTGGAGAATTTCCTCTAGCATGGAGTATGTGGCCAGATATGCTGGTTGTAGATGTCTCAGACAACAATTTGTCTGGCAATTTCTCCAGTTCAATGGGTGTTCCAAGCTTCCTAATGGTATTGGATGTGAGCAAAAACAATTTCGGAGGTCAAATTCCTTCTTCTCTATTCCAAAACTGCAGCATTTTGCACAGCATTGATCTTGGAGACAATAGATTTACTGGAAGCATACCTCTACAGACAAGATCAATTGTATCATCCAAATTGTATATGCTAAGATTGCGATCCAACTCTTTAAGCGGACATATCCCCAGTCGATTGTGCTCTCTTCAAGATCTTCATATCATAGACCTTGGCCACAACAACTTTTCAGGGACCATTCCCAAGTGTTTGTATAATCTGACTGCTTTGGCCTACCGTAATTACAGTCCTGAGTACAGTTTTGAAAATTATCTTGAGAAGGCCAGCTTGACATTGAAGGGACAAGAACTCGAATATGACAGGACCCTGAATTTGGTGAATAGCATTGATTTCTCATCAAATAACTTAGAAGGTGAAATCCCTGAAGAAATAAGCAGCCTCATTGGATTGGGCACGTTGAACTTGTCAAGAAATCAACTGACTGGAAACATTCCCTCAAAGATTGGAAACATGCAATTGCTGGAAACTCTTGATCTCTCACACAATCACCTCTCCGGACAGATTCCTCAAAGTTTCTCTTCACTAACCTCTCTGTCTCACTTGAACTTGTCTTTCAACAACTTGTCCGGAAGAATTCCTTCAGGCTACCAACTTCAAACACTGAATGATTCATCCATTTACGAAGGCAATCCATCCTTGTGTGGGGTCCCTCTTTCAACTGTCTGCCCGGGAGATGGCCCTGACGATGGTGATCATAATGATGATGATAATGATGAGAATGGGAAGTTTGGTATCGTTGTTAGCGCTGTCCTCGGCTTCATCATAGGCTTCTGGAGTGTCTGTGGCACATTGGTTATGAAGAAATCATGGAGGTATGCCTATTTTCGATTCTTTGATAACATAAAGGAGAAGGCAGCATTAGCAATTGCATTGAGAGTGGCTCGTTGGCAAAGGAGGACTTGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0000003 GO:0003006 GO:0005575 GO:0005618 GO:0005623 GO:0007275 GO:0007389 GO:0008150 GO:0009505 GO:0009531 GO:0009553 GO:0009653 GO:0009790 GO:0009791 GO:0009793 GO:0009798 GO:0009888 GO:0010154 GO:0010453 GO:0022414 GO:0022603 GO:0030312 GO:0032501 GO:0032502 GO:0042659 GO:0044426 GO:0044462 GO:0044464 GO:0045595 GO:0048226 GO:0048229 GO:0048316 GO:0048608 GO:0048731 GO:0048856 GO:0050789 GO:0050793 GO:0050794 GO:0051239 GO:0051302 GO:0061458 GO:0065001 GO:0065007 GO:0071944 GO:0090558 GO:0090708 GO:0099402 GO:1905392 GO:1905421 GO:2000026 GO:2000067 GO:2000280

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

LRRNT_2 LRR_1 LRR_4 LRR_6 LRR_8

Protein Analysis

992

Amino Acids

109.84

Weight (kDa)

5.54

Isoelectric Point (pI)

36.52

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
LRRNT_2	PF08263	57 - 94	1.3e-11	Leucine rich repeat N-terminal domain
LRR_14	PF23598	123 - 196	2.3e-10	Leucine-rich repeat region
LRR_8	PF13855	133 - 190	1.5e-06	Leucine rich repeat
LRR_14	PF23598	200 - 340	8.5e-10	Leucine-rich repeat region
LRR_8	PF13855	365 - 402	2.5e-06	Leucine rich repeat
LRR_14	PF23598	365 - 491	4.5e-07	Leucine-rich repeat region
LRR_14	PF23598	806 - 894	6.5e-08	Leucine-rich repeat region
LRR_8	PF13855	822 - 880	1.8e-08	Leucine rich repeat

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

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Tree File

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Publication-ready

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Orthologous Genes (Group: OG0000048)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT2G34930
fragaria_vesca	FvH4_3g12670 FvH4_3g12672 FvH4_3g12740 FvH4_3g12742 FvH4_3g12770 FvH4_3g12770 FvH4_3g12860 FvH4_3g12890 FvH4_3g13431 FvH4_3g13433 FvH4_3g13435 FvH4_3g13470 FvH4_3g13470 FvH4_3g13480 FvH4_3g13562 FvH4_3g13580 FvH4_3g13600 FvH4_3g13600 FvH4_3g13600 FvH4_3g13600 FvH4_3g13600 FvH4_3g13600 FvH4_3g13610 FvH4_3g13620 FvH4_3g13620 FvH4_3g23240 FvH4_3g32910 FvH4_3g35070 FvH4_3g45520 FvH4_5g08430 FvH4_5g08450 FvH4_6g53230 FvH4_6g53300
malus_domestica	MD05G1217600.v1.1 MD05G1217700.v1.1 MD05G1224700.v1.1 MD05G1225100.v1.1 MD05G1225300.v1.1 MD05G1225400.v1.1 MD05G1235900.v1.1 MD05G1236100.v1.1 MD05G1236300.v1.1 MD05G1237200.v1.1 MD05G1241600.v1.1 MD05G1245700.v1.1 MD05G1245800.v1.1 MD05G1245900.v1.1 MD05G1246000.v1.1 MD05G1246100.v1.1 MD05G1246300.v1.1 MD05G1246400.v1.1 MD05G1246500.v1.1 MD05G1248100.v1.1 MD05G1248200.v1.1 MD05G1264300.v1.1 MD05G1275900.v1.1 MD07G1051400.v1.1 MD09G1012600.v1.1 MD09G1012700.v1.1 MD09G1012800.v1.1 MD10G1221400.v1.1 MD10G1221500.v1.1 MD10G1221600.v1.1 MD10G1221900.v1.1 MD10G1222200.v1.1 MD10G1222400.v1.1 MD10G1222500.v1.1 MD10G1222900.v1.1 MD10G1223000.v1.1 MD10G1223100.v1.1 MD10G1223500.v1.1 MD10G1228000.v1.1 MD12G1019600.v1.1 MD12G1020000.v1.1 MD12G1020100.v1.1 MD17G1013200.v1.1 MD17G1013300.v1.1 MD17G1013400.v1.1
prunus_persica	Prupe.1G060500_v2.0.a1 Prupe.1G100100_v2.0.a1 Prupe.3G124000_v2.0.a1 Prupe.3G304400_v2.0.a1 Prupe.4G116800_v2.0.a1 Prupe.4G116900_v2.0.a1 Prupe.4G117000_v2.0.a1 Prupe.4G121800_v2.0.a1 Prupe.4G121900_v2.0.a1 Prupe.4G122000_v2.0.a1 Prupe.4G122100_v2.0.a1 Prupe.4G122200_v2.0.a1 Prupe.4G122300_v2.0.a1 Prupe.4G122500_v2.0.a1 Prupe.4G122600_v2.0.a1 Prupe.4G122800_v2.0.a1 Prupe.4G122900_v2.0.a1 Prupe.4G123000_v2.0.a1 Prupe.4G123100_v2.0.a1 Prupe.4G123200_v2.0.a1 Prupe.4G131500_v2.0.a1 Prupe.4G131600_v2.0.a1 Prupe.7G032500_v2.0.a1 Prupe.7G032900_v2.0.a1 Prupe.7G033000_v2.0.a1 Prupe.7G033100_v2.0.a1 Prupe.7G033300_v2.0.a1 Prupe.7G033600_v2.0.a1 Prupe.7G034600_v2.0.a1 Prupe.7G040200_v2.0.a1 Prupe.7G059200_v2.0.a1
pyrus_communis	pycom05g20580 pycom05g20590 pycom05g20760 pycom05g20800 pycom05g21280 pycom05g21290 pycom05g21820 pycom05g21830 pycom05g22180 pycom05g22190 pycom05g22210 pycom05g22450 pycom05g22460 pycom05g22470 pycom05g22480 pycom05g22490 pycom05g23770 pycom05g23780 pycom05g24050 pycom05g24060 pycom07g03910 pycom10g18700 pycom10g18720 pycom10g18730 pycom10g18740 pycom10g19150 pycom111g01060 pycom12g01660 pycom12g01690 pycom12g01720 pycom12g01740 pycom12g01750 pycom12g01770 pycom12g01810 pycom12g01820 pycom12g01830 pycom12g01840 pycom12g01870 pycom12g01900 pycom17g01060 pycom17g01070
rosa_chinensis	RchiOBHm_Chr1g0315041 RchiOBHm_Chr1g0315051 RchiOBHm_Chr1g0315071 RchiOBHm_Chr1g0315161 RchiOBHm_Chr1g0315211 RchiOBHm_Chr1g0315251 RchiOBHm_Chr1g0315321 RchiOBHm_Chr1g0315391 RchiOBHm_Chr1g0315451 RchiOBHm_Chr1g0315481 RchiOBHm_Chr1g0315551 RchiOBHm_Chr1g0315601 RchiOBHm_Chr1g0315621 RchiOBHm_Chr1g0359221 RchiOBHm_Chr2g0142981 RchiOBHm_Chr2g0143001 RchiOBHm_Chr2g0143061 RchiOBHm_Chr2g0143091 RchiOBHm_Chr2g0175321 RchiOBHm_Chr2g0175341 RchiOBHm_Chr2g0175361 RchiOBHm_Chr2g0175371 RchiOBHm_Chr3g0470491 RchiOBHm_Chr3g0480881 RchiOBHm_Chr3g0485511 RchiOBHm_Chr5g0020741 RchiOBHm_Chr5g0020901 RchiOBHm_Chr5g0020931 RchiOBHm_Chr5g0020941 RchiOBHm_Chr5g0020961 RchiOBHm_Chr5g0020971 RchiOBHm_Chr5g0021451 RchiOBHm_Chr5g0021531 RchiOBHm_Chr5g0021831 RchiOBHm_Chr5g0021841 RchiOBHm_Chr5g0021931 RchiOBHm_Chr5g0021941 RchiOBHm_Chr5g0021981 RchiOBHm_Chr5g0021991 RchiOBHm_Chr5g0022011 RchiOBHm_Chr5g0022181 RchiOBHm_Chr5g0022191 RchiOBHm_Chr5g0022211 RchiOBHm_Chr5g0022221 RchiOBHm_Chr5g0022231 RchiOBHm_Chr5g0022291 RchiOBHm_Chr5g0022301 RchiOBHm_Chr5g0022331 RchiOBHm_Chr5g0022361 RchiOBHm_Chr5g0022371 RchiOBHm_Chr5g0022381 RchiOBHm_Chr5g0022401 RchiOBHm_Chr5g0022431 RchiOBHm_Chr5g0022451 RchiOBHm_Chr5g0022541 RchiOBHm_Chr5g0022591 RchiOBHm_Chr5g0022601 RchiOBHm_Chr5g0022701 RchiOBHm_Chr5g0022741 RchiOBHm_Chr5g0022791 RchiOBHm_Chr5g0022811 RchiOBHm_Chr5g0022851 RchiOBHm_Chr5g0029441 RchiOBHm_Chr5g0041631 RchiOBHm_Chr5g0069391 RchiOBHm_Chr6g0273811 RchiOBHm_Chr6g0273831 RchiOBHm_Chr6g0275331 RchiOBHm_Chr7g0219061
rosa_laevigata	RLG00000002463 RLG00000020007 RLG00000020008 RLG00000022320 RLG00000022321 RLG00000023446 RLG00000030742 RLG00000030743 RLG00000030747 RLG00000032557 RLG00000032564 RLG00000032571 RLG00000032573 RLG00000032574 RLG00000032612 RLG00000032633 RLG00000032636 RLG00000032638 RLG00000032650 RLG00000032651 RLG00000032652 RLG00000032653 RLG00000032655 RLG00000032673 RLG00000032678 RLG00000032769 RLG00000032857 RLG00000033168 RLG00000033465 RLG00000034086 RLG00000034222 RLG00000035290
rosa_multiflora	Rmu_co8143358.1_g000001 Rmu_co8518791.1_g000001 Rmu_sc0000178.1_g000008 Rmu_sc0000178.1_g000014 Rmu_sc0000401.1_g000005 Rmu_sc0000401.1_g000013 Rmu_sc0000401.1_g000017 Rmu_sc0000401.1_g000018 Rmu_sc0000401.1_g000024 Rmu_sc0000401.1_g000025 Rmu_sc0000576.1_g000020 Rmu_sc0001585.1_g000003 Rmu_sc0001585.1_g000005 Rmu_sc0001585.1_g000008 Rmu_sc0001784.1_g000006 Rmu_sc0001784.1_g000011 Rmu_sc0001784.1_g000022 Rmu_sc0001784.1_g000028 Rmu_sc0002052.1_g000004 Rmu_sc0002052.1_g000011 Rmu_sc0002277.1_g000003 Rmu_sc0002277.1_g000006 Rmu_sc0002277.1_g000024 Rmu_sc0002658.1_g000012 Rmu_sc0003512.1_g000004 Rmu_sc0003512.1_g000007 Rmu_sc0004180.1_g000016 Rmu_sc0004180.1_g000029 Rmu_sc0004180.1_g000034 Rmu_sc0005639.1_g000008 Rmu_sc0005639.1_g000023 Rmu_sc0006070.1_g000016 Rmu_sc0006070.1_g000017 Rmu_sc0006966.1_g000021 Rmu_sc0006966.1_g000023 Rmu_sc0007239.1_g000003 Rmu_sc0008460.1_g000010 Rmu_sc0009984.1_g000008 Rmu_sc0010181.1_g000005 Rmu_sc0010181.1_g000010 Rmu_sc0010503.1_g000006 Rmu_sc0011646.1_g000003 Rmu_sc0012984.1_g000011 Rmu_sc0016972.1_g000005 Rmu_sc0016972.1_g000008 Rmu_sc0023070.1_g000003 Rmu_sc0025660.1_g000001 Rmu_ssc0000322.1_g000019
rosa_roxburghii	Rroxscaffold_1G00038860 Rroxscaffold_1G00053490 Rroxscaffold_1G00053500 Rroxscaffold_1G00054230 Rroxscaffold_1G00056460 Rroxscaffold_1G00056470 Rroxscaffold_1G00056480 Rroxscaffold_1G00056500 Rroxscaffold_1G00056510 Rroxscaffold_1G00056620 Rroxscaffold_1G00056690 Rroxscaffold_1G00056710 Rroxscaffold_1G00056720 Rroxscaffold_1G00056730 Rroxscaffold_1G00056740 Rroxscaffold_1G00056750 Rroxscaffold_1G00056760 Rroxscaffold_1G00056870 Rroxscaffold_1G00056900 Rroxscaffold_1G00057120 Rroxscaffold_1G00057560 Rroxscaffold_2G00077430 Rroxscaffold_2G00102160 Rroxscaffold_3G00231420 Rroxscaffold_3G00231430 Rroxscaffold_4G00297230 Rroxscaffold_4G00331570 Rroxscaffold_6G00396700 Rroxscaffold_6G00400940 Rroxscaffold_7G00192740
rosa_rugosa	Rorug01G0004400 Rorug01G0004500 Rorug02G0377600 Rorug02G0378000 Rorug02G0582800 Rorug02G0583400 Rorug03G0187000 Rorug03G0218800 Rorug04G0081200 Rorug05G0062700 Rorug05G0062700 Rorug05G0063100 Rorug05G0063200 Rorug05G0063200 Rorug05G0063200 Rorug05G0067000 Rorug05G0069700 Rorug05G0069900 Rorug05G0070000 Rorug05G0070100 Rorug05G0070300 Rorug05G0070400 Rorug05G0070600 Rorug05G0070600 Rorug05G0072300 Rorug05G0072400 Rorug05G0072500 Rorug05G0072500 Rorug05G0072600.1 Rorug05G0072700 Rorug05G0072800 Rorug05G0072800 Rorug05G0072900 Rorug05G0073000 Rorug05G0073000 Rorug05G0073400 Rorug05G0073400 Rorug05G0073400 Rorug05G0074800 Rorug05G0075000 Rorug05G0114300 Rorug05G0194200 Rorug06G0097800
rosa_samantha	Rh2AG401400 Rh2CG387600 Rh2CG417000 Rh2CG637400 Rh5CG169600 Rh5CG172100 Rh5CG175200 Rh5CG317100 Rh6DG187900
rosa_wichuraiana	Rw1G000750 Rw1G000790 Rw1G000820 Rw1G000860 Rw1G000880 Rw1G000910 Rw2G035180 Rw2G035200 Rw2G035240 Rw2G054370 Rw2G054380 Rw5G013570 Rw5G013580 Rw5G013590 Rw5G013910 Rw5G013980 Rw5G014110 Rw5G014120 Rw5G014280 Rw5G014310 Rw5G014400 Rw5G014420 Rw5G014440 Rw5G014460 Rw5G014480 Rw5G014500 Rw5G014520 Rw5G014530 Rw5G042390

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AanI	TTATAA	1 cut(s)	1584
AccB7I	CCANNNNNTGG	1 cut(s)	527
AccIII	TCCGGA	2 cut(s)	2570, 2642
AciI	CCGC	2 cut(s)	420, 2175
AclWI	GGATC	2 cut(s)	1791, 2154
AcoI	YGGCCR	2 cut(s)	1907, 2230
AcsI	RAATTY	9 cut(s)	444, 735, 905, 1044, 1747, 1883, 2028, 2386, 2649
AcuI	CTGAAG	4 cut(s)	1124, 1451, 2460, 2640
AfaI	GTAC	6 cut(s)	289, 632, 985, 1072, 1637, 2312
AfeI	AGCGCT	2 cut(s)	186, 2821
AfiI	CCNNNNNNNGG	8 cut(s)	527, 640, 1280, 1454, 2389, 2718, 2750, 2762
AleI	CACNNNNGTG	1 cut(s)	668
AloI	GAACNNNNNNTCC	2 cut(s)	764, 796
Alw21I	GWGCWC	2 cut(s)	957, 2201
Alw26I	GTCTC	6 cut(s)	172, 1476, 1642, 1936, 2076, 2616
AlwI	GGATC	2 cut(s)	1791, 2154
Ama87I	CYCGRG	1 cut(s)	2743
Aor13HI	TCCGGA	2 cut(s)	2570, 2642
Aor51HI	AGCGCT	2 cut(s)	186, 2821
AoxI	GGCC	8 cut(s)	890, 1666, 1733, 1907, 2230, 2286, 2337, 2752
ApaI	GGGCCC	1 cut(s)	894
ApeKI	GCWGC	8 cut(s)	255, 660, 993, 1694, 1762, 2055, 2451, 2930
ApoI	RAATTY	9 cut(s)	444, 735, 905, 1044, 1747, 1883, 2028, 2386, 2649
ArsI	GACNNNNNNTTYG	6 cut(s)	905, 937, 1310, 1342, 2371, 2403
AseI	ATTAAT	2 cut(s)	372, 816
Asp700I	GAANNNNTTC	3 cut(s)	1025, 1058, 2653
AspLEI	GCGC	2 cut(s)	187, 2822
AsuC2I	CCSGG	3 cut(s)	1732, 2744, 2745
AsuHPI	GGTGA	6 cut(s)	781, 1244, 2404, 2441, 2555, 2777
AvaI	CYCGRG	1 cut(s)	2743
AvaII	GGWCC	6 cut(s)	310, 1365, 1445, 2250, 2379, 2722
AxyI	CCTNAGG	1 cut(s)	998
BaeGI	GKGCMC	2 cut(s)	894, 2471
BalI	TGGCCA	2 cut(s)	1909, 2232
BanII	GRGCYC	3 cut(s)	894, 957, 1356
BarI	GAAGNNNNNNTAC	2 cut(s)	217, 249
BbsI	GAAGAC	1 cut(s)	936
Bbv12I	GWGCWC	2 cut(s)	957, 2201
BbvI	GCAGC	8 cut(s)	242, 672, 1005, 1681, 1749, 2067, 2463, 2942
BccI	CCATC	8 cut(s)	125, 255, 301, 1633, 1716, 2716, 2744, 2756
BciVI	GTATCC	1 cut(s)	1806
BclI	TGATCA	3 cut(s)	331, 1753, 2767
BcnI	CCSGG	3 cut(s)	1732, 2744, 2745
BcoDI	GTCTC	6 cut(s)	172, 1476, 1642, 1936, 2076, 2616
BfaI	CTAG	4 cut(s)	1130, 1247, 1686, 1892
BfmI	CTRYAG	4 cut(s)	1339, 1435, 2053, 2111
BfoI	RGCGCY	2 cut(s)	188, 2823
BfuI	GTATCC	1 cut(s)	1806
BglII	AGATCT	2 cut(s)	1009, 2209
BisI	GCNGC	8 cut(s)	256, 661, 994, 1695, 1763, 2056, 2452, 2931
BlpI	GCTNAGC	1 cut(s)	386
BlsI	GCNGC	8 cut(s)	257, 662, 995, 1696, 1764, 2057, 2453, 2932
Bme1390I	CCNGG	3 cut(s)	1732, 2744, 2745
Bme18I	GGWCC	6 cut(s)	310, 1365, 1445, 2250, 2379, 2722
BmeT110I	CYCGRG	1 cut(s)	2743
BmrFI	CCNGG	3 cut(s)	1732, 2744, 2745
BmrI	ACTGGG	3 cut(s)	1371, 1402, 2181
BmsI	GCATC	5 cut(s)	101, 174, 859, 881, 1681
BmuI	ACTGGG	3 cut(s)	1371, 1402, 2181
BpiI	GAAGAC	1 cut(s)	936
BplI	GAGNNNNNCTC	4 cut(s)	174, 206, 2941, 2973
BpmI	CTGGAG	3 cut(s)	1899, 1945, 2869
Bpu10I	CCTNAGC	1 cut(s)	656
Bpu1102I	GCTNAGC	1 cut(s)	386
BpuEI	CTTGAG	2 cut(s)	902, 2351
BpuMI	CCSGG	3 cut(s)	1732, 2744, 2745
BsaBI	GATNNNNATC	3 cut(s)	157, 2158, 2766
BsaJI	CCNNGG	6 cut(s)	934, 1117, 1594, 2227, 2743, 2827
BsaWI	WCCGGW	2 cut(s)	2570, 2642
BsaXI	ACNNNNNCTCC	4 cut(s)	1604, 1634, 2842, 2872
Bsc4I	CCNNNNNNNGG	8 cut(s)	527, 640, 1280, 1454, 2389, 2718, 2750, 2762
Bse1I	ACTGG	8 cut(s)	1188, 1366, 1397, 1882, 1962, 2101, 2187, 2503
Bse21I	CCTNAGG	1 cut(s)	998
Bse3DI	GCAATG	2 cut(s)	1425, 1607
Bse8I	GATNNNNATC	3 cut(s)	157, 2158, 2766
BseAI	TCCGGA	2 cut(s)	2570, 2642
BseDI	CCNNGG	6 cut(s)	934, 1117, 1594, 2227, 2743, 2827
BseGI	GGATG	7 cut(s)	312, 443, 779, 2005, 2132, 2687, 2708
BseJI	GATNNNNATC	3 cut(s)	157, 2158, 2766
BseLI	CCNNNNNNNGG	8 cut(s)	527, 640, 1280, 1454, 2389, 2718, 2750, 2762
BseMI	GCAATG	2 cut(s)	1425, 1607
BseMII	CTCAG	6 cut(s)	205, 574, 1256, 1530, 1947, 2298
BseNI	ACTGG	8 cut(s)	1188, 1366, 1397, 1882, 1962, 2101, 2187, 2503
BseSI	GKGCMC	2 cut(s)	894, 2471
BseXI	GCAGC	8 cut(s)	242, 672, 1005, 1681, 1749, 2067, 2463, 2942
BseYI	CCCAGC	3 cut(s)	520, 756, 830
BsgI	GTGCAG	2 cut(s)	89, 1012
BshFI	GGCC	8 cut(s)	892, 1668, 1735, 1909, 2232, 2288, 2339, 2754
BsiHKAI	GWGCWC	2 cut(s)	957, 2201
BsiHKCI	CYCGRG	1 cut(s)	2743
BsiSI	CCGG	4 cut(s)	1731, 2571, 2643, 2744
BslFI	GGGAC	5 cut(s)	1245, 1351, 2263, 2370, 2708
BslI	CCNNNNNNNGG	8 cut(s)	527, 640, 1280, 1454, 2389, 2718, 2750, 2762
BsmAI	GTCTC	6 cut(s)	172, 1476, 1642, 1936, 2076, 2616
BsmBI	CGTCTC	1 cut(s)	172
BsmFI	GGGAC	5 cut(s)	1245, 1351, 2263, 2370, 2708
BsnI	GGCC	8 cut(s)	892, 1668, 1735, 1909, 2232, 2288, 2339, 2754
BsoBI	CYCGRG	1 cut(s)	2743
Bsp120I	GGGCCC	1 cut(s)	890
Bsp1286I	GDGCHC	5 cut(s)	894, 957, 1356, 2201, 2471
Bsp13I	TCCGGA	2 cut(s)	2570, 2642
Bsp1720I	GCTNAGC	1 cut(s)	386
BspACI	CCGC	2 cut(s)	420, 2175
BspANI	GGCC	8 cut(s)	892, 1668, 1735, 1909, 2232, 2288, 2339, 2754
BspCNI	CTCAG	6 cut(s)	204, 573, 1255, 1529, 1946, 2299
BspEI	TCCGGA	2 cut(s)	2570, 2642
BspHI	TCATGA	2 cut(s)	1356, 1387
BspMAI	CTGCAG	2 cut(s)	1439, 2057
BspPI	GGATC	2 cut(s)	1791, 2154
BsrDI	GCAATG	2 cut(s)	1425, 1607
BsrI	ACTGG	8 cut(s)	1188, 1366, 1397, 1882, 1962, 2101, 2187, 2503
BssECI	CCNNGG	6 cut(s)	934, 1117, 1594, 2227, 2743, 2827
BssT1I	CCWWGG	2 cut(s)	934, 2227
Bst4CI	ACNGT	8 cut(s)	120, 287, 578, 1780, 2294, 2303, 2315, 2737
Bst6I	CTCTTC	4 cut(s)	168, 625, 2208, 2599
BstC8I	GCNNGC	1 cut(s)	2341
BstDSI	CCRYGG	1 cut(s)	1594
BstEII	GGTNACC	1 cut(s)	530
BstF5I	GGATG	7 cut(s)	312, 443, 779, 2005, 2132, 2687, 2708
BstH2I	RGCGCY	2 cut(s)	188, 2823
BstHHI	GCGC	2 cut(s)	187, 2822
BstMAI	GTCTC	6 cut(s)	172, 1476, 1642, 1936, 2076, 2616
BstMWI	GCNNNNNNNGC	4 cut(s)	1609, 1915, 2155, 2936
BstNSI	RCATGY	2 cut(s)	697, 2530
BstPI	GGTNACC	1 cut(s)	530
BstSCI	CCNGG	3 cut(s)	1730, 2742, 2743
BstSFI	CTRYAG	4 cut(s)	1339, 1435, 2053, 2111
BstSLI	GKGCMC	2 cut(s)	894, 2471
BstV1I	GCAGC	8 cut(s)	242, 672, 1005, 1681, 1749, 2067, 2463, 2942
BstV2I	GAAGAC	1 cut(s)	936
BstX2I	RGATCY	3 cut(s)	1009, 1783, 2209
BstXI	CCANNNNNNTGG	3 cut(s)	980, 1595, 1969
BstYI	RGATCY	3 cut(s)	1009, 1783, 2209
Bsu36I	CCTNAGG	1 cut(s)	998
BsuI	GTATCC	1 cut(s)	1806
BsuRI	GGCC	8 cut(s)	892, 1668, 1735, 1909, 2232, 2288, 2339, 2754
BtgI	CCRYGG	1 cut(s)	1594
BtsCI	GGATG	7 cut(s)	312, 443, 779, 2005, 2132, 2687, 2708
BtsIMutI	CAGTG	2 cut(s)	1785, 2675
Cac8I	GCNNGC	1 cut(s)	2341
CciI	TCATGA	2 cut(s)	1356, 1387
CfoI	GCGC	2 cut(s)	187, 2822
Cfr9I	CCCGGG	1 cut(s)	2743
Csp6I	GTAC	6 cut(s)	288, 631, 984, 1071, 1636, 2311
CviQI	GTAC	6 cut(s)	288, 631, 984, 1071, 1636, 2311
EaeI	YGGCCR	2 cut(s)	1907, 2230
Eam1104I	CTCTTC	4 cut(s)	168, 625, 2208, 2599
EarI	CTCTTC	4 cut(s)	168, 625, 2208, 2599
Ecl136II	GAGCTC	1 cut(s)	955
Eco130I	CCWWGG	2 cut(s)	934, 2227
Eco24I	GRGCYC	3 cut(s)	894, 957, 1356
Eco32I	GATATC	1 cut(s)	1551
Eco47I	GGWCC	6 cut(s)	310, 1365, 1445, 2250, 2379, 2722
Eco47III	AGCGCT	2 cut(s)	186, 2821
Eco53kI	GAGCTC	1 cut(s)	955
Eco57I	CTGAAG	4 cut(s)	1124, 1451, 2460, 2640
Eco81I	CCTNAGG	1 cut(s)	998
Eco88I	CYCGRG	1 cut(s)	2743
Eco91I	GGTNACC	1 cut(s)	530
EcoICRI	GAGCTC	1 cut(s)	955
EcoO109I	RGGNCCY	6 cut(s)	891, 1365, 1445, 1667, 2379, 2722
EcoO65I	GGTNACC	1 cut(s)	530
EcoRI	GAATTC	2 cut(s)	444, 2649
EcoRV	GATATC	1 cut(s)	1551
EcoT14I	CCWWGG	2 cut(s)	934, 2227
EcoT22I	ATGCAT	2 cut(s)	167, 874
EcoT38I	GRGCYC	3 cut(s)	894, 957, 1356
ErhI	CCWWGG	2 cut(s)	934, 2227
Esp3I	CGTCTC	1 cut(s)	172
FalI	AAGNNNNNCTT	9 cut(s)	1482, 1514, 2327, 2359, 2578, 2610, 2638, 2670, 2959
FaqI	GGGAC	5 cut(s)	1245, 1351, 2263, 2370, 2708
FbaI	TGATCA	3 cut(s)	331, 1753, 2767
Fnu4HI	GCNGC	8 cut(s)	256, 661, 994, 1695, 1763, 2056, 2452, 2931
FokI	GGATG	7 cut(s)	319, 450, 766, 2012, 2119, 2674, 2695
FriOI	GRGCYC	3 cut(s)	894, 957, 1356
Fsp4HI	GCNGC	8 cut(s)	256, 661, 994, 1695, 1763, 2056, 2452, 2931
FspBI	CTAG	4 cut(s)	1130, 1247, 1686, 1892
GlaI	GCGC	2 cut(s)	186, 2821
GluI	GCNGC	8 cut(s)	256, 661, 994, 1695, 1763, 2056, 2452, 2931
GsaI	CCCAGC	3 cut(s)	524, 760, 834
GsuI	CTGGAG	3 cut(s)	1899, 1945, 2869
HaeII	RGCGCY	2 cut(s)	188, 2823
HaeIII	GGCC	8 cut(s)	892, 1668, 1735, 1909, 2232, 2288, 2339, 2754
HapII	CCGG	4 cut(s)	1731, 2571, 2643, 2744
HhaI	GCGC	2 cut(s)	187, 2822
Hin6I	GCGC	2 cut(s)	185, 2820
HinP1I	GCGC	2 cut(s)	185, 2820
HincII	GTYRAC	1 cut(s)	691
HindII	GTYRAC	1 cut(s)	691
HindIII	AAGCTT	3 cut(s)	464, 1601, 1981
HinfI	GANTC	9 cut(s)	514, 569, 967, 1211, 1325, 1738, 2578, 2684, 2904
HpaII	CCGG	4 cut(s)	1731, 2571, 2643, 2744
HphI	GGTGA	6 cut(s)	781, 1244, 2404, 2441, 2555, 2777
Hpy166II	GTNNAC	4 cut(s)	652, 691, 772, 1252
Hpy8I	GTNNAC	4 cut(s)	652, 691, 772, 1252
Hpy99I	CGWCG	1 cut(s)	769
HpyCH4III	ACNGT	8 cut(s)	120, 287, 578, 1780, 2294, 2303, 2315, 2737
HpyCH4IV	ACGT	2 cut(s)	403, 2471
HpyF10VI	GCNNNNNNNGC	4 cut(s)	1609, 1915, 2155, 2936
HpySE526I	ACGT	2 cut(s)	403, 2471
HspAI	GCGC	2 cut(s)	185, 2820
KflI	GGGWCCC	2 cut(s)	1365, 2722
Kpn2I	TCCGGA	2 cut(s)	2570, 2642
Ksp22I	TGATCA	3 cut(s)	331, 1753, 2767
LmnI	GCTCC	1 cut(s)	344
Lsp1109I	GCAGC	8 cut(s)	242, 672, 1005, 1681, 1749, 2067, 2463, 2942
LweI	GCATC	5 cut(s)	101, 174, 859, 881, 1681
MaeI	CTAG	4 cut(s)	1130, 1247, 1686, 1892
MaeII	ACGT	2 cut(s)	403, 2471
MaeIII	GTNAC	4 cut(s)	208, 404, 530, 1492
MfeI	CAATTG	4 cut(s)	1757, 2124, 2531, 2940
MflI	RGATCY	3 cut(s)	1009, 1783, 2209
MhlI	GDGCHC	5 cut(s)	894, 957, 1356, 2201, 2471
MlsI	TGGCCA	2 cut(s)	1909, 2232
MluNI	TGGCCA	2 cut(s)	1909, 2232
MlyI	GAGTC	2 cut(s)	1220, 1334
MmeI	TCCRAC	4 cut(s)	1257, 1302, 1432, 2187
Mox20I	TGGCCA	2 cut(s)	1909, 2232
Mph1103I	ATGCAT	2 cut(s)	167, 874
MroI	TCCGGA	2 cut(s)	2570, 2642
MroXI	GAANNNNTTC	3 cut(s)	1025, 1058, 2653
MscI	TGGCCA	2 cut(s)	1909, 2232
MslI	CAYNNNNRTG	6 cut(s)	160, 668, 1206, 1803, 2713, 2775
Msp20I	TGGCCA	2 cut(s)	1909, 2232
MspA1I	CMGCKG	1 cut(s)	834
MspI	CCGG	4 cut(s)	1731, 2571, 2643, 2744
MspR9I	CCNGG	3 cut(s)	1732, 2744, 2745
MunI	CAATTG	4 cut(s)	1757, 2124, 2531, 2940
MwoI	GCNNNNNNNGC	4 cut(s)	1609, 1915, 2155, 2936
NciI	CCSGG	3 cut(s)	1732, 2744, 2745
NmeAIII	GCCGAG	1 cut(s)	2808
NmuCI	GTSAC	1 cut(s)	1492
NsiI	ATGCAT	2 cut(s)	167, 874
NspI	RCATGY	2 cut(s)	697, 2530
OliI	CACNNNNGTG	1 cut(s)	668
PagI	TCATGA	2 cut(s)	1356, 1387
PcsI	WCGNNNNNNNCGW	1 cut(s)	1428
PdmI	GAANNNNTTC	3 cut(s)	1025, 1058, 2653
PfeI	GAWTC	7 cut(s)	514, 569, 967, 1738, 2578, 2684, 2904
PflFI	GACNNNGTC	1 cut(s)	1363
PflMI	CCANNNNNTGG	1 cut(s)	527
PkrI	GCNGC	8 cut(s)	257, 662, 995, 1696, 1764, 2057, 2453, 2932
PleI	GAGTC	2 cut(s)	1219, 1333
PpsI	GAGTC	2 cut(s)	1219, 1333
PpuMI	RGGWCCY	4 cut(s)	1365, 1445, 2379, 2722
PshBI	ATTAAT	2 cut(s)	372, 816
PsiI	TTATAA	1 cut(s)	1584
Psp124BI	GAGCTC	1 cut(s)	957
Psp5II	RGGWCCY	4 cut(s)	1365, 1445, 2379, 2722
PspEI	GGTNACC	1 cut(s)	530
PspFI	CCCAGC	3 cut(s)	520, 756, 830
PspOMI	GGGCCC	1 cut(s)	890
PspPPI	RGGWCCY	4 cut(s)	1365, 1445, 2379, 2722
PsrI	GAACNNNNNNTAC	2 cut(s)	389, 421
PstI	CTGCAG	2 cut(s)	1439, 2057
PsuI	RGATCY	3 cut(s)	1009, 1783, 2209
PsyI	GACNNNGTC	1 cut(s)	1363
PvuII	CAGCTG	1 cut(s)	834
RsaI	GTAC	6 cut(s)	289, 632, 985, 1072, 1637, 2312
RsaNI	GTAC	6 cut(s)	288, 631, 984, 1071, 1636, 2311
RseI	CAYNNNNRTG	6 cut(s)	160, 668, 1206, 1803, 2713, 2775
SacI	GAGCTC	1 cut(s)	957
SatI	GCNGC	8 cut(s)	256, 661, 994, 1695, 1763, 2056, 2452, 2931
SchI	GAGTC	2 cut(s)	1220, 1334
ScrFI	CCNGG	3 cut(s)	1732, 2744, 2745
SduI	GDGCHC	5 cut(s)	894, 957, 1356, 2201, 2471
SfaNI	GCATC	5 cut(s)	101, 174, 859, 881, 1681
SfcI	CTRYAG	4 cut(s)	1339, 1435, 2053, 2111
SinI	GGWCC	6 cut(s)	310, 1365, 1445, 2250, 2379, 2722
SmaI	CCCGGG	1 cut(s)	2745
SmiMI	CAYNNNNRTG	6 cut(s)	160, 668, 1206, 1803, 2713, 2775
SmlI	CTYRAG	2 cut(s)	917, 2330
SmoI	CTYRAG	2 cut(s)	917, 2330
SsiI	CCGC	2 cut(s)	420, 2175
SspMI	CTAG	4 cut(s)	1130, 1247, 1686, 1892
SstI	GAGCTC	1 cut(s)	957
StyD4I	CCNGG	3 cut(s)	1730, 2742, 2743
StyI	CCWWGG	2 cut(s)	934, 2227
TaaI	ACNGT	8 cut(s)	120, 287, 578, 1780, 2294, 2303, 2315, 2737
TaiI	ACGT	2 cut(s)	406, 2474
TaqI	TCGA	8 cut(s)	168, 442, 957, 1257, 1422, 2191, 2367, 2902
TatI	WGTACW	1 cut(s)	2310
TfiI	GAWTC	7 cut(s)	514, 569, 967, 1738, 2578, 2684, 2904
TscAI	CASTG	2 cut(s)	1785, 2682
TseFI	GTSAC	1 cut(s)	1492
TseI	GCWGC	8 cut(s)	255, 660, 993, 1694, 1762, 2055, 2451, 2930
Tsp45I	GTSAC	1 cut(s)	1492
TspDTI	ATGAA	9 cut(s)	87, 813, 1308, 1513, 1631, 2204, 2676, 2824, 2888
TspGWI	ACGGA	5 cut(s)	360, 753, 1263, 1502, 1583
TspMI	CCCGGG	1 cut(s)	2743
TspRI	CASTG	2 cut(s)	1785, 2682
Tth111I	GACNNNGTC	1 cut(s)	1363
Van91I	CCANNNNNTGG	1 cut(s)	527
VpaK11BI	GGWCC	6 cut(s)	310, 1365, 1445, 2250, 2379, 2722
VspI	ATTAAT	2 cut(s)	372, 816
XapI	RAATTY	9 cut(s)	444, 735, 905, 1044, 1747, 1883, 2028, 2386, 2649
XceI	RCATGY	2 cut(s)	697, 2530
XmaI	CCCGGG	1 cut(s)	2743
XmnI	GAANNNNTTC	3 cut(s)	1025, 1058, 2653
XspI	CTAG	4 cut(s)	1130, 1247, 1686, 1892
Zsp2I	ATGCAT	2 cut(s)	167, 874

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.