RchiOBHm_Chr1g0315601

LRR receptor-like serine threonine-protein kinase

Basic Information

Type: gene
Biological Identity
rosa_chinensis
1
Physical Location & Seq
Reverse (-)
2657399 .. 2660269
2871 bp
Loading structure...
UTR
Exon/CDS
Intron
PRQ54611

Sequence Viewer

Length: 2871 bp
ATGGATATCTATGTTTACTTTAACCCGATCTCTCGCCTCATTCTTCACTTCTTGCTCTTGTTATTTTTGGCATCTTCGTGCCTAAGCAATAGCAGTGTCGTGGTGGGATCATGCATGGAGGAAGAGAGGCGAGCACTTCTCAGCTTTAAACAAGATCTCAGTGATCCATCTGGTAAGCTTTCTTCTTGGGCTGGTCACGAATGCTGCCAATGGACAGGGATTTCATGCAACAACCGCACTGGTCATGTTGCAACGGTTGACCTCCGTAATACATATCCATACACCCGTGGTGATGATCAGTGGAACACCACGGAGTATCTTCAATCTTTTTTGGGGGGTAAGTTAATTAATCCTTCTTTGCTTGGCTTGAAACATTTGAGTTACTTAGACTTGAGCTCGAATGATTTTCAAGGGACTCACATTCCCAAGTTTATTGGGGAGCTTACAAGTCTGAGATATCTCAATTTTTCAAGTTTCCTGTCTTTGTGTTCAGTTGCGGGAGAGATTCCTTCTTCCCTTGGTAACCTCTCAAACTTGAACTATCTTGACCTCGGTTCTAGTTATTCTCTTTCTTCCAAAAACTTGAATTGGCTTTCTCATCTCTCTTCCCTAAAATACCTCAATCTTAGAGGTGTGAACCTTAGCAGCATAGGAGTTAGTTGGCTACATGAGGTTAACATGCTTCCTTCACTCTTAGAGTTGCATTTGTCTAGTTGCGAAATTGGTGGAAACCAGCTTCCACTCTCCATGACTACAATTAACTTCACATCACTTTTGGTCCTTGATATGTCATTGAATAGTATTAATTTTTCATATCCTAAATGGATGTTTAATCTTACTAGCCTTACAAAAGTTGATCTGAGTGGGAATTCTTTCAGTGGCCCCTTTCTTGATGAATTTTTAAGACTCAAATCTCTAGAACACCTTGACTTACGGACTGTAGGACTCAAAGGTCAATTTCCCAAATTTAGTGGAAATTTGTGTAGGCTCAAGTCATTAAGTCTTGCATCTAGTCAAATTGATGGGGGGATTGAAGAGTTTTTGAGTGGTTTCTCAAATTGTTCATTTAATAGAATGGAGTCACTAGATTTGTATGGCTGTGGGCTGGTAGGCAAATTGCCAAGTTCATTGGGAATGCTGAGAAGCCTGCAGCATCTCGATCTCAGCTCCAACTCTTTCTGGGGATCCATTCCAGAATTTATTATCAGCAATTTATCATCATCCCTGAAGACACTTGATCTTAGTGGTAATATTTTCAACGGTTCCATTCCTCAAAGTTTGGGAAAACTTTCTCAGCTAGTGAGCCTTGATCTATCTTATAATTCATGGGAAGGAAATTTAACCGAAGCCCATTTCATAAATCTCACAAAATTAGAGTCTTTTGTAGTTAGCACAGCCCCACCTGTGCCCATCATTTTCAATTTGATTGATTATGAATGGATTCCTCCTTTCAAGCTCCACCACATTGAAATGCACAACTGCCGAGTAGGCCCCGGCTTCCCTGTATGGCTTCAATCTCAAACTGAGCTCGAGTCAGTCTCACTTGTGAATGCTGGACTCTCGGGTGCAATACCAGAGGAATGGCTCTTTAAGATATCTGCCCAGATCCATGGGTTGGATTTATCTTCCAATCAAATAAGTGGAAAGCTTCCATTCCGATTCAACTCTTTTCCGAATCTGGGTTCCATAGTTTTGAGCCATAATCAATTTGATGGCACTATTCCATCATCTATTTGTAACATTCAATCTCTATATGAACTTGCTCTGAATAACAATCAGTTATCCGGAGAATTCCCTAAAGAATGGAGTTTGTGGAGCAACATACAAATTGTGGATGTCTCAAACAACAATATGTCTGGTAATATTCCAAGCTCAATGGGCATTCCAAGTTCTCTTTATATACTGAATACAGACAACAATCAATTTAGCGGAGAAATTCCTTCTGCCTTGCAAAATTGCTCATTATTGGACAGACTTTATCTTGGAGGCAACAAATTTACTGGAAGCATACCTTCTTGGATAGGATCAAAAGTATCCACATTCACAGTGCTGCAATTGCGATCAAACTCTTTAAGTGGACATATTCCTCATCATTTGTGCAGTCTTCCTATCCTTCAGATCCTAGACCTTAGTCACAATAGATTTTCAGGGACTATTCCCAACTGTTTGAATAAATTGACTTCTTTAATCTATAGTAGGGATGGGCGCTGGATCTACTCTAGTGATTTTGAGGTAATAACTGTGACTGTAAAAGGAAGAGCAAGTGAATACTTCTCTGACAATGAGATGCTTCTAACCATTATTGATTTTTCGCATAATGATTTAGAAGGTGAAATTCCTGAAGAAATCAGCAGTCTCGTTCGATTAGCTACATTAAACTTGTCCATTAATCAATTAAGAGGAAATATCCCCTCAAAAATTGGAAACTTGCACTTGCTTGAAACACTTGACCTCTCCCAGAACCAGCTTTCAGGACAGATTCCACAAAGTCTCGCTTCTCTGACCTTCTTATCTCACTTGAACTTGTCTTGCAACAAGTTGACCGGAAGAATTCCTTCGGGCAACCAACTTCAGACGCTCGATGATTCATCTATTTATGAGGGCAATCCTTCACTCTGTGGATTTCCTCTTTCAAATTGCACAGAAGATGGAGGCAACATGCATGAGCCTCATGAAGCGGATGATGAAAAGCTTGGTTTATATACCAGCGTGGTGCTTGGCTTTATCATAGGCTTTTGGAGTGTTTGTGGCACATTGATATTGAAGAAGTCATGGAGGTATGCTTATTTTCAATTTTTTGACCACATCAAAGAGAAAGTAGCACTAGCAATTGCATTGAAAGTAGCTCGTTTGAAAGCCGCAAGGCAGTGA

Protein Analysis

956

Amino Acids

105.78

Weight (kDa)

5.75

Isoelectric Point (pI)

40.7

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
LRRNT_2 PF08263 40 - 77 2e-12 Leucine rich repeat N-terminal domain
LRR_14 PF23598 182 - 338 4.8e-08 Leucine-rich repeat region
LRR_14 PF23598 325 - 510 2.1e-10 Leucine-rich repeat region
LRR_8 PF13855 381 - 441 6.5e-06 Leucine rich repeat
LRR_8 PF13855 656 - 715 6.2e-06 Leucine rich repeat
LRR_14 PF23598 774 - 865 5.6e-08 Leucine-rich repeat region
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready

Orthologous Genes (Group: OG0000048)

Species Orthologous Gene IDs
arabidopsis_thaliana AT2G34930
fragaria_vesca FvH4_3g12670 FvH4_3g12672 FvH4_3g12740 FvH4_3g12742 FvH4_3g12770 FvH4_3g12770 FvH4_3g12860 FvH4_3g12890 FvH4_3g13431 FvH4_3g13433 FvH4_3g13435 FvH4_3g13470 FvH4_3g13470 FvH4_3g13480 FvH4_3g13562 FvH4_3g13580 FvH4_3g13600 FvH4_3g13600 FvH4_3g13600 FvH4_3g13600 FvH4_3g13600 FvH4_3g13600 FvH4_3g13610 FvH4_3g13620 FvH4_3g13620 FvH4_3g23240 FvH4_3g32910 FvH4_3g35070 FvH4_3g45520 FvH4_5g08430 FvH4_5g08450 FvH4_6g53230 FvH4_6g53300
malus_domestica MD05G1217600.v1.1 MD05G1217700.v1.1 MD05G1224700.v1.1 MD05G1225100.v1.1 MD05G1225300.v1.1 MD05G1225400.v1.1 MD05G1235900.v1.1 MD05G1236100.v1.1 MD05G1236300.v1.1 MD05G1237200.v1.1 MD05G1241600.v1.1 MD05G1245700.v1.1 MD05G1245800.v1.1 MD05G1245900.v1.1 MD05G1246000.v1.1 MD05G1246100.v1.1 MD05G1246300.v1.1 MD05G1246400.v1.1 MD05G1246500.v1.1 MD05G1248100.v1.1 MD05G1248200.v1.1 MD05G1264300.v1.1 MD05G1275900.v1.1 MD07G1051400.v1.1 MD09G1012600.v1.1 MD09G1012700.v1.1 MD09G1012800.v1.1 MD10G1221400.v1.1 MD10G1221500.v1.1 MD10G1221600.v1.1 MD10G1221900.v1.1 MD10G1222200.v1.1 MD10G1222400.v1.1 MD10G1222500.v1.1 MD10G1222900.v1.1 MD10G1223000.v1.1 MD10G1223100.v1.1 MD10G1223500.v1.1 MD10G1228000.v1.1 MD12G1019600.v1.1 MD12G1020000.v1.1 MD12G1020100.v1.1 MD17G1013200.v1.1 MD17G1013300.v1.1 MD17G1013400.v1.1
prunus_persica Prupe.1G060500_v2.0.a1 Prupe.1G100100_v2.0.a1 Prupe.3G124000_v2.0.a1 Prupe.3G304400_v2.0.a1 Prupe.4G116800_v2.0.a1 Prupe.4G116900_v2.0.a1 Prupe.4G117000_v2.0.a1 Prupe.4G121800_v2.0.a1 Prupe.4G121900_v2.0.a1 Prupe.4G122000_v2.0.a1 Prupe.4G122100_v2.0.a1 Prupe.4G122200_v2.0.a1 Prupe.4G122300_v2.0.a1 Prupe.4G122500_v2.0.a1 Prupe.4G122600_v2.0.a1 Prupe.4G122800_v2.0.a1 Prupe.4G122900_v2.0.a1 Prupe.4G123000_v2.0.a1 Prupe.4G123100_v2.0.a1 Prupe.4G123200_v2.0.a1 Prupe.4G131500_v2.0.a1 Prupe.4G131600_v2.0.a1 Prupe.7G032500_v2.0.a1 Prupe.7G032900_v2.0.a1 Prupe.7G033000_v2.0.a1 Prupe.7G033100_v2.0.a1 Prupe.7G033300_v2.0.a1 Prupe.7G033600_v2.0.a1 Prupe.7G034600_v2.0.a1 Prupe.7G040200_v2.0.a1 Prupe.7G059200_v2.0.a1
pyrus_communis pycom05g20580 pycom05g20590 pycom05g20760 pycom05g20800 pycom05g21280 pycom05g21290 pycom05g21820 pycom05g21830 pycom05g22180 pycom05g22190 pycom05g22210 pycom05g22450 pycom05g22460 pycom05g22470 pycom05g22480 pycom05g22490 pycom05g23770 pycom05g23780 pycom05g24050 pycom05g24060 pycom07g03910 pycom10g18700 pycom10g18720 pycom10g18730 pycom10g18740 pycom10g19150 pycom111g01060 pycom12g01660 pycom12g01690 pycom12g01720 pycom12g01740 pycom12g01750 pycom12g01770 pycom12g01810 pycom12g01820 pycom12g01830 pycom12g01840 pycom12g01870 pycom12g01900 pycom17g01060 pycom17g01070
rosa_chinensis RchiOBHm_Chr1g0315041 RchiOBHm_Chr1g0315051 RchiOBHm_Chr1g0315071 RchiOBHm_Chr1g0315161 RchiOBHm_Chr1g0315211 RchiOBHm_Chr1g0315251 RchiOBHm_Chr1g0315321 RchiOBHm_Chr1g0315391 RchiOBHm_Chr1g0315451 RchiOBHm_Chr1g0315481 RchiOBHm_Chr1g0315551 RchiOBHm_Chr1g0315601 RchiOBHm_Chr1g0315621 RchiOBHm_Chr1g0359221 RchiOBHm_Chr2g0142981 RchiOBHm_Chr2g0143001 RchiOBHm_Chr2g0143061 RchiOBHm_Chr2g0143091 RchiOBHm_Chr2g0175321 RchiOBHm_Chr2g0175341 RchiOBHm_Chr2g0175361 RchiOBHm_Chr2g0175371 RchiOBHm_Chr3g0470491 RchiOBHm_Chr3g0480881 RchiOBHm_Chr3g0485511 RchiOBHm_Chr5g0020741 RchiOBHm_Chr5g0020901 RchiOBHm_Chr5g0020931 RchiOBHm_Chr5g0020941 RchiOBHm_Chr5g0020961 RchiOBHm_Chr5g0020971 RchiOBHm_Chr5g0021451 RchiOBHm_Chr5g0021531 RchiOBHm_Chr5g0021831 RchiOBHm_Chr5g0021841 RchiOBHm_Chr5g0021931 RchiOBHm_Chr5g0021941 RchiOBHm_Chr5g0021981 RchiOBHm_Chr5g0021991 RchiOBHm_Chr5g0022011 RchiOBHm_Chr5g0022181 RchiOBHm_Chr5g0022191 RchiOBHm_Chr5g0022211 RchiOBHm_Chr5g0022221 RchiOBHm_Chr5g0022231 RchiOBHm_Chr5g0022291 RchiOBHm_Chr5g0022301 RchiOBHm_Chr5g0022331 RchiOBHm_Chr5g0022361 RchiOBHm_Chr5g0022371 RchiOBHm_Chr5g0022381 RchiOBHm_Chr5g0022401 RchiOBHm_Chr5g0022431 RchiOBHm_Chr5g0022451 RchiOBHm_Chr5g0022541 RchiOBHm_Chr5g0022591 RchiOBHm_Chr5g0022601 RchiOBHm_Chr5g0022701 RchiOBHm_Chr5g0022741 RchiOBHm_Chr5g0022791 RchiOBHm_Chr5g0022811 RchiOBHm_Chr5g0022851 RchiOBHm_Chr5g0029441 RchiOBHm_Chr5g0041631 RchiOBHm_Chr5g0069391 RchiOBHm_Chr6g0273811 RchiOBHm_Chr6g0273831 RchiOBHm_Chr6g0275331 RchiOBHm_Chr7g0219061
rosa_laevigata RLG00000002463 RLG00000020007 RLG00000020008 RLG00000022320 RLG00000022321 RLG00000023446 RLG00000030742 RLG00000030743 RLG00000030747 RLG00000032557 RLG00000032564 RLG00000032571 RLG00000032573 RLG00000032574 RLG00000032612 RLG00000032633 RLG00000032636 RLG00000032638 RLG00000032650 RLG00000032651 RLG00000032652 RLG00000032653 RLG00000032655 RLG00000032673 RLG00000032678 RLG00000032769 RLG00000032857 RLG00000033168 RLG00000033465 RLG00000034086 RLG00000034222 RLG00000035290
rosa_multiflora Rmu_co8143358.1_g000001 Rmu_co8518791.1_g000001 Rmu_sc0000178.1_g000008 Rmu_sc0000178.1_g000014 Rmu_sc0000401.1_g000005 Rmu_sc0000401.1_g000013 Rmu_sc0000401.1_g000017 Rmu_sc0000401.1_g000018 Rmu_sc0000401.1_g000024 Rmu_sc0000401.1_g000025 Rmu_sc0000576.1_g000020 Rmu_sc0001585.1_g000003 Rmu_sc0001585.1_g000005 Rmu_sc0001585.1_g000008 Rmu_sc0001784.1_g000006 Rmu_sc0001784.1_g000011 Rmu_sc0001784.1_g000022 Rmu_sc0001784.1_g000028 Rmu_sc0002052.1_g000004 Rmu_sc0002052.1_g000011 Rmu_sc0002277.1_g000003 Rmu_sc0002277.1_g000006 Rmu_sc0002277.1_g000024 Rmu_sc0002658.1_g000012 Rmu_sc0003512.1_g000004 Rmu_sc0003512.1_g000007 Rmu_sc0004180.1_g000016 Rmu_sc0004180.1_g000029 Rmu_sc0004180.1_g000034 Rmu_sc0005639.1_g000008 Rmu_sc0005639.1_g000023 Rmu_sc0006070.1_g000016 Rmu_sc0006070.1_g000017 Rmu_sc0006966.1_g000021 Rmu_sc0006966.1_g000023 Rmu_sc0007239.1_g000003 Rmu_sc0008460.1_g000010 Rmu_sc0009984.1_g000008 Rmu_sc0010181.1_g000005 Rmu_sc0010181.1_g000010 Rmu_sc0010503.1_g000006 Rmu_sc0011646.1_g000003 Rmu_sc0012984.1_g000011 Rmu_sc0016972.1_g000005 Rmu_sc0016972.1_g000008 Rmu_sc0023070.1_g000003 Rmu_sc0025660.1_g000001 Rmu_ssc0000322.1_g000019
rosa_roxburghii Rroxscaffold_1G00038860 Rroxscaffold_1G00053490 Rroxscaffold_1G00053500 Rroxscaffold_1G00054230 Rroxscaffold_1G00056460 Rroxscaffold_1G00056470 Rroxscaffold_1G00056480 Rroxscaffold_1G00056500 Rroxscaffold_1G00056510 Rroxscaffold_1G00056620 Rroxscaffold_1G00056690 Rroxscaffold_1G00056710 Rroxscaffold_1G00056720 Rroxscaffold_1G00056730 Rroxscaffold_1G00056740 Rroxscaffold_1G00056750 Rroxscaffold_1G00056760 Rroxscaffold_1G00056870 Rroxscaffold_1G00056900 Rroxscaffold_1G00057120 Rroxscaffold_1G00057560 Rroxscaffold_2G00077430 Rroxscaffold_2G00102160 Rroxscaffold_3G00231420 Rroxscaffold_3G00231430 Rroxscaffold_4G00297230 Rroxscaffold_4G00331570 Rroxscaffold_6G00396700 Rroxscaffold_6G00400940 Rroxscaffold_7G00192740
rosa_rugosa Rorug01G0004400 Rorug01G0004500 Rorug02G0377600 Rorug02G0378000 Rorug02G0582800 Rorug02G0583400 Rorug03G0187000 Rorug03G0218800 Rorug04G0081200 Rorug05G0062700 Rorug05G0062700 Rorug05G0063100 Rorug05G0063200 Rorug05G0063200 Rorug05G0063200 Rorug05G0067000 Rorug05G0069700 Rorug05G0069900 Rorug05G0070000 Rorug05G0070100 Rorug05G0070300 Rorug05G0070400 Rorug05G0070600 Rorug05G0070600 Rorug05G0072300 Rorug05G0072400 Rorug05G0072500 Rorug05G0072500 Rorug05G0072600.1 Rorug05G0072700 Rorug05G0072800 Rorug05G0072800 Rorug05G0072900 Rorug05G0073000 Rorug05G0073000 Rorug05G0073400 Rorug05G0073400 Rorug05G0073400 Rorug05G0074800 Rorug05G0075000 Rorug05G0114300 Rorug05G0194200 Rorug06G0097800
rosa_samantha Rh2AG401400 Rh2CG387600 Rh2CG417000 Rh2CG637400 Rh5CG169600 Rh5CG172100 Rh5CG175200 Rh5CG317100 Rh6DG187900
rosa_wichuraiana Rw1G000750 Rw1G000790 Rw1G000820 Rw1G000860 Rw1G000880 Rw1G000910 Rw2G035180 Rw2G035200 Rw2G035240 Rw2G054370 Rw2G054380 Rw5G013570 Rw5G013580 Rw5G013590 Rw5G013910 Rw5G013980 Rw5G014110 Rw5G014120 Rw5G014280 Rw5G014310 Rw5G014400 Rw5G014420 Rw5G014440 Rw5G014460 Rw5G014480 Rw5G014500 Rw5G014520 Rw5G014530 Rw5G042390

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 1 cut(s) 1320
AasI GACNNNNNNGTC 1 cut(s) 951
AccB7I CCANNNNNTGG 1 cut(s) 1615
AccIII TCCGGA 1 cut(s) 1784
AciI CCGC 5 cut(s) 235, 497, 1929, 2678, 2859
AclWI GGATC 8 cut(s) 115, 158, 1179, 1192, 1600, 2032, 2113, 2219
AcuI CTGAAG 4 cut(s) 1247, 2099, 2361, 2555
AdeI CACNNNGTG 1 cut(s) 2618
AfiI CCNNNNNNNGG 2 cut(s) 1615, 1679
Alw21I GWGCWC 3 cut(s) 136, 398, 1530
Alw26I GTCTC 4 cut(s) 1543, 1843, 2360, 2495
AlwI GGATC 8 cut(s) 115, 158, 1179, 1192, 1600, 2032, 2113, 2219
Ama87I CYCGRG 2 cut(s) 1529, 1561
Aor13HI TCCGGA 1 cut(s) 1784
AoxI GGCC 2 cut(s) 880, 1489
ApeKI GCWGC 4 cut(s) 204, 645, 1150, 2050
ArsI GACNNNNNNTTYG 2 cut(s) 1361, 1393
AseI ATTAAT 3 cut(s) 348, 804, 2388
Asp700I GAANNNNTTC 4 cut(s) 872, 1288, 1440, 2554
AspLEI GCGC 1 cut(s) 2208
AspS9I GGNCC 3 cut(s) 778, 881, 1490
AsuC2I CCSGG 1 cut(s) 1494
AsuHPI GGTGA 2 cut(s) 302, 2342
AvaI CYCGRG 2 cut(s) 1529, 1561
AvaII GGWCC 1 cut(s) 778
BaeGI GKGCMC 1 cut(s) 1410
BamHI GGATCC 1 cut(s) 1184
BanII GRGCYC 2 cut(s) 398, 1530
BarI GAAGNNNNNNTAC 2 cut(s) 166, 198
BbsI GAAGAC 2 cut(s) 1235, 2096
Bbv12I GWGCWC 3 cut(s) 136, 398, 1530
BbvI GCAGC 4 cut(s) 191, 657, 1162, 2037
BccI CCATC 7 cut(s) 175, 1016, 1418, 1706, 1732, 2195, 2642
BciVI GTATCC 1 cut(s) 2044
BclI TGATCA 1 cut(s) 295
BcnI CCSGG 1 cut(s) 1494
BcoDI GTCTC 4 cut(s) 1543, 1843, 2360, 2495
BfmI CTRYAG 3 cut(s) 939, 1148, 2191
BfoI RGCGCY 1 cut(s) 2209
BfuI GTATCC 1 cut(s) 2044
BglI GCCNNNNNGGC 1 cut(s) 1488
BglII AGATCT 1 cut(s) 154
BisI GCNGC 5 cut(s) 205, 646, 1151, 2051, 2859
BlsI GCNGC 5 cut(s) 206, 647, 1152, 2052, 2860
Bme1390I CCNGG 1 cut(s) 1494
Bme18I GGWCC 1 cut(s) 778
BmeT110I CYCGRG 2 cut(s) 1529, 1561
BmgT120I GGNCC 3 cut(s) 778, 881, 1490
BmiI GGNNCC 5 cut(s) 883, 1186, 1264, 1492, 1684
BmrFI CCNGG 1 cut(s) 1494
BmsI GCATC 4 cut(s) 80, 1016, 1162, 2277
BoxI GACNNNNGTC 1 cut(s) 2130
BpiI GAAGAC 2 cut(s) 1235, 2096
BplI GAGNNNNNCTC 4 cut(s) 123, 155, 1523, 1555
Bpu10I CCTNAGC 2 cut(s) 83, 641
BpuEI CTTGAG 2 cut(s) 412, 974
BpuMI CCSGG 1 cut(s) 1494
BsaJI CCNNGG 6 cut(s) 286, 309, 517, 550, 1492, 1609
BsaWI WCCGGW 2 cut(s) 1784, 2543
BsaXI ACNNNNNCTCC 2 cut(s) 2731, 2761
Bsc4I CCNNNNNNNGG 2 cut(s) 1615, 1679
Bse1I ACTGG 2 cut(s) 244, 2005
BseAI TCCGGA 1 cut(s) 1784
BseDI CCNNGG 6 cut(s) 286, 309, 517, 550, 1492, 1609
BseGI GGATG 5 cut(s) 831, 1220, 1840, 2206, 2686
BseLI CCNNNNNNNGG 2 cut(s) 1615, 1679
BseMII CTCAG 8 cut(s) 154, 172, 443, 851, 1130, 1177, 1307, 1515
BseNI ACTGG 2 cut(s) 244, 2005
BseSI GKGCMC 1 cut(s) 1410
BseXI GCAGC 4 cut(s) 191, 657, 1162, 2037
BsgI GTGCAG 1 cut(s) 2119
BshFI GGCC 2 cut(s) 882, 1491
BsiHKAI GWGCWC 3 cut(s) 136, 398, 1530
BsiHKCI CYCGRG 2 cut(s) 1529, 1561
BsiSI CCGG 3 cut(s) 1494, 1785, 2544
BslFI GGGAC 2 cut(s) 427, 2164
BslI CCNNNNNNNGG 2 cut(s) 1615, 1679
BsmAI GTCTC 4 cut(s) 1543, 1843, 2360, 2495
BsmFI GGGAC 2 cut(s) 427, 2164
BsmI GAATGC 4 cut(s) 206, 1140, 1555, 1881
BsnI GGCC 2 cut(s) 882, 1491
BsoBI CYCGRG 2 cut(s) 1529, 1561
Bsp1286I GDGCHC 4 cut(s) 136, 398, 1410, 1530
Bsp13I TCCGGA 1 cut(s) 1784
Bsp19I CCATGG 1 cut(s) 1609
BspACI CCGC 5 cut(s) 235, 497, 1929, 2678, 2859
BspANI GGCC 2 cut(s) 882, 1491
BspCNI CTCAG 8 cut(s) 153, 171, 444, 852, 1131, 1176, 1306, 1516
BspEI TCCGGA 1 cut(s) 1784
BspHI TCATGA 1 cut(s) 2671
BspLI GGNNCC 5 cut(s) 883, 1186, 1264, 1492, 1684
BspMAI CTGCAG 1 cut(s) 1152
BspPI GGATC 8 cut(s) 115, 158, 1179, 1192, 1600, 2032, 2113, 2219
BspQI GCTCTTC 1 cut(s) 2251
BsrI ACTGG 2 cut(s) 244, 2005
BssECI CCNNGG 6 cut(s) 286, 309, 517, 550, 1492, 1609
BssT1I CCWWGG 2 cut(s) 517, 1609
Bst4CI ACNGT 7 cut(s) 256, 940, 1262, 2047, 2165, 2242, 2248
Bst6I CTCTTC 4 cut(s) 117, 610, 1029, 2251
BstC8I GCNNGC 2 cut(s) 132, 1148
BstDSI CCRYGG 3 cut(s) 286, 309, 1609
BstEII GGTNACC 1 cut(s) 521
BstF5I GGATG 5 cut(s) 831, 1220, 1840, 2206, 2686
BstH2I RGCGCY 1 cut(s) 2209
BstHHI GCGC 1 cut(s) 2208
BstMAI GTCTC 4 cut(s) 1543, 1843, 2360, 2495
BstMWI GCNNNNNNNGC 4 cut(s) 234, 1488, 1878, 2056
BstNSI RCATGY 2 cut(s) 682, 2662
BstPAI GACNNNNGTC 1 cut(s) 2130
BstPI GGTNACC 1 cut(s) 521
BstSCI CCNGG 1 cut(s) 1492
BstSFI CTRYAG 3 cut(s) 939, 1148, 2191
BstSLI GKGCMC 1 cut(s) 1410
BstV1I GCAGC 4 cut(s) 191, 657, 1162, 2037
BstV2I GAAGAC 2 cut(s) 1235, 2096
BstX2I RGATCY 5 cut(s) 154, 1184, 1605, 2118, 2211
BstXI CCANNNNNNTGG 2 cut(s) 1581, 1610
BstYI RGATCY 5 cut(s) 154, 1184, 1605, 2118, 2211
BsuI GTATCC 1 cut(s) 2044
BsuRI GGCC 2 cut(s) 882, 1491
BtgI CCRYGG 3 cut(s) 286, 309, 1609
BtsCI GGATG 5 cut(s) 831, 1220, 1840, 2206, 2686
BtsI GCAGTG 1 cut(s) 100
BtsIMutI CAGTG 6 cut(s) 100, 166, 237, 305, 883, 2052
Cac8I GCNNGC 2 cut(s) 132, 1148
CciI TCATGA 1 cut(s) 2671
CfoI GCGC 1 cut(s) 2208
Cfr13I GGNCC 3 cut(s) 778, 881, 1490
CseI GACGC 1 cut(s) 2584
CspCI CAANNNNNGTGG 2 cut(s) 952, 987
DraI TTTAAA 1 cut(s) 148
DraIII CACNNNGTG 1 cut(s) 2618
DrdI GACNNNNNNGTC 1 cut(s) 951
DseDI GACNNNNNNGTC 1 cut(s) 951
Eam1104I CTCTTC 4 cut(s) 117, 610, 1029, 2251
EarI CTCTTC 4 cut(s) 117, 610, 1029, 2251
Ecl136II GAGCTC 2 cut(s) 396, 1528
Eco130I CCWWGG 2 cut(s) 517, 1609
Eco24I GRGCYC 2 cut(s) 398, 1530
Eco32I GATATC 3 cut(s) 7, 458, 1596
Eco47I GGWCC 1 cut(s) 778
Eco53kI GAGCTC 2 cut(s) 396, 1528
Eco57I CTGAAG 4 cut(s) 1247, 2099, 2361, 2555
Eco88I CYCGRG 2 cut(s) 1529, 1561
Eco91I GGTNACC 1 cut(s) 521
EcoICRI GAGCTC 2 cut(s) 396, 1528
EcoO109I RGGNCCY 1 cut(s) 1490
EcoO65I GGTNACC 1 cut(s) 521
EcoRI GAATTC 3 cut(s) 868, 1790, 2550
EcoRV GATATC 3 cut(s) 7, 458, 1596
EcoT14I CCWWGG 2 cut(s) 517, 1609
EcoT22I ATGCAT 2 cut(s) 116, 2664
EcoT38I GRGCYC 2 cut(s) 398, 1530
ErhI CCWWGG 2 cut(s) 517, 1609
FalI AAGNNNNNCTT 6 cut(s) 1996, 2028, 2479, 2511, 2539, 2571
FaqI GGGAC 2 cut(s) 427, 2164
FauI CCCGC 1 cut(s) 490
FbaI TGATCA 1 cut(s) 295
Fnu4HI GCNGC 5 cut(s) 205, 646, 1151, 2051, 2859
FokI GGATG 5 cut(s) 838, 1207, 1847, 2213, 2693
FriOI GRGCYC 2 cut(s) 398, 1530
Fsp4HI GCNGC 5 cut(s) 205, 646, 1151, 2051, 2859
GlaI GCGC 1 cut(s) 2207
GluI GCNGC 5 cut(s) 205, 646, 1151, 2051, 2859
HaeII RGCGCY 1 cut(s) 2209
HaeIII GGCC 2 cut(s) 882, 1491
HapII CCGG 3 cut(s) 1494, 1785, 2544
HgaI GACGC 1 cut(s) 2584
HhaI GCGC 1 cut(s) 2208
Hin6I GCGC 1 cut(s) 2206
HinP1I GCGC 1 cut(s) 2206
HincII GTYRAC 3 cut(s) 259, 676, 2541
HindII GTYRAC 3 cut(s) 259, 676, 2541
HindIII AAGCTT 3 cut(s) 176, 1646, 2690
HpaI GTTAAC 1 cut(s) 676
HpaII CCGG 3 cut(s) 1494, 1785, 2544
HphI GGTGA 2 cut(s) 302, 2342
Hpy166II GTNNAC 6 cut(s) 16, 259, 637, 676, 2078, 2541
Hpy188I TCNGA 9 cut(s) 453, 861, 1658, 1674, 1767, 2118, 2278, 2502, 2574
Hpy8I GTNNAC 6 cut(s) 16, 259, 637, 676, 2078, 2541
HpyCH4III ACNGT 7 cut(s) 256, 940, 1262, 2047, 2165, 2242, 2248
HpyF10VI GCNNNNNNNGC 4 cut(s) 234, 1488, 1878, 2056
HspAI GCGC 1 cut(s) 2206
Kpn2I TCCGGA 1 cut(s) 1784
Ksp22I TGATCA 1 cut(s) 295
KspAI GTTAAC 1 cut(s) 676
LguI GCTCTTC 1 cut(s) 2251
LmnI GCTCC 4 cut(s) 439, 1172, 1461, 1815
Lsp1109I GCAGC 4 cut(s) 191, 657, 1162, 2037
LweI GCATC 4 cut(s) 80, 1016, 1162, 2277
MaeIII GTNAC 7 cut(s) 194, 380, 521, 1080, 1736, 2132, 2242
MfeI CAATTG 2 cut(s) 2054, 2829
MflI RGATCY 5 cut(s) 154, 1184, 1605, 2118, 2211
MhlI GDGCHC 4 cut(s) 136, 398, 1410, 1530
MlyI GAGTC 7 cut(s) 409, 900, 939, 1088, 1385, 1541, 1551
MmeI TCCRAC 2 cut(s) 1194, 1596
Mph1103I ATGCAT 2 cut(s) 116, 2664
MroI TCCGGA 1 cut(s) 1784
MroXI GAANNNNTTC 4 cut(s) 872, 1288, 1440, 2554
MslI CAYNNNNRTG 2 cut(s) 76, 1469
MspI CCGG 3 cut(s) 1494, 1785, 2544
MspR9I CCNGG 1 cut(s) 1494
MunI CAATTG 2 cut(s) 2054, 2829
Mva1269I GAATGC 4 cut(s) 206, 1140, 1555, 1881
MwoI GCNNNNNNNGC 4 cut(s) 234, 1488, 1878, 2056
NciI CCSGG 1 cut(s) 1494
NcoI CCATGG 1 cut(s) 1609
NlaIV GGNNCC 5 cut(s) 883, 1186, 1264, 1492, 1684
NmeAIII GCCGAG 1 cut(s) 1508
NmuCI GTSAC 4 cut(s) 194, 1080, 2132, 2242
NsiI ATGCAT 2 cut(s) 116, 2664
NspI RCATGY 2 cut(s) 682, 2662
PacI TTAATTAA 1 cut(s) 348
PaeR7I CTCGAG 1 cut(s) 1529
PagI TCATGA 1 cut(s) 2671
PciSI GCTCTTC 1 cut(s) 2251
PctI GAATGC 4 cut(s) 206, 1140, 1555, 1881
PdmI GAANNNNTTC 4 cut(s) 872, 1288, 1440, 2554
PfeI GAWTC 6 cut(s) 505, 1441, 1659, 1675, 2479, 2585
PflMI CCANNNNNTGG 1 cut(s) 1615
PkrI GCNGC 5 cut(s) 206, 647, 1152, 2052, 2860
PleI GAGTC 7 cut(s) 409, 900, 939, 1087, 1384, 1540, 1551
PpsI GAGTC 7 cut(s) 409, 900, 939, 1087, 1384, 1540, 1551
PshAI GACNNNNGTC 1 cut(s) 2130
PshBI ATTAAT 3 cut(s) 348, 804, 2388
PsiI TTATAA 1 cut(s) 1320
Psp124BI GAGCTC 2 cut(s) 398, 1530
PspEI GGTNACC 1 cut(s) 521
PspN4I GGNNCC 5 cut(s) 883, 1186, 1264, 1492, 1684
PspPI GGNCC 3 cut(s) 778, 881, 1490
PspXI VCTCGAGB 1 cut(s) 1529
PstI CTGCAG 1 cut(s) 1152
PsuI RGATCY 5 cut(s) 154, 1184, 1605, 2118, 2211
RseI CAYNNNNRTG 2 cut(s) 76, 1469
SacI GAGCTC 2 cut(s) 398, 1530
SapI GCTCTTC 1 cut(s) 2251
SatI GCNGC 5 cut(s) 205, 646, 1151, 2051, 2859
Sau96I GGNCC 3 cut(s) 778, 881, 1490
SchI GAGTC 7 cut(s) 409, 900, 939, 1088, 1385, 1541, 1551
ScrFI CCNGG 1 cut(s) 1494
SduI GDGCHC 4 cut(s) 136, 398, 1410, 1530
SfaNI GCATC 4 cut(s) 80, 1016, 1162, 2277
SfcI CTRYAG 3 cut(s) 939, 1148, 2191
Sfr274I CTCGAG 1 cut(s) 1529
SinI GGWCC 1 cut(s) 778
SlaI CTCGAG 1 cut(s) 1529
SmiMI CAYNNNNRTG 2 cut(s) 76, 1469
SmlI CTYRAG 3 cut(s) 391, 989, 1529
SmoI CTYRAG 3 cut(s) 391, 989, 1529
SsiI CCGC 5 cut(s) 235, 497, 1929, 2678, 2859
SspI AATATT 2 cut(s) 1252, 1864
SstI GAGCTC 2 cut(s) 398, 1530
StyD4I CCNGG 1 cut(s) 1492
StyI CCWWGG 2 cut(s) 517, 1609
TaaI ACNGT 7 cut(s) 256, 940, 1262, 2047, 2165, 2242, 2248
TaqI TCGA 5 cut(s) 398, 1158, 1530, 2362, 2580
TauI GCSGC 1 cut(s) 2861
TfiI GAWTC 6 cut(s) 505, 1441, 1659, 1675, 2479, 2585
TscAI CASTG 6 cut(s) 100, 166, 244, 305, 883, 2052
TseFI GTSAC 4 cut(s) 194, 1080, 2132, 2242
TseI GCWGC 4 cut(s) 204, 645, 1150, 2050
Tsp45I GTSAC 4 cut(s) 194, 1080, 2132, 2242
TspGWI ACGGA 3 cut(s) 254, 326, 949
TspRI CASTG 6 cut(s) 100, 166, 244, 305, 883, 2052
Van91I CCANNNNNTGG 1 cut(s) 1615
VpaK11BI GGWCC 1 cut(s) 778
VspI ATTAAT 3 cut(s) 348, 804, 2388
XbaI TCTAGA 1 cut(s) 916
XceI RCATGY 2 cut(s) 682, 2662
XhoI CTCGAG 1 cut(s) 1529
XmnI GAANNNNTTC 4 cut(s) 872, 1288, 1440, 2554
Zsp2I ATGCAT 2 cut(s) 116, 2664
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.