Rw1G000790

LRR receptor-like serine threonine-protein kinase

Basic Information

Type: gene
Biological Identity
rosa_wichuraiana
Chr1
Physical Location & Seq
Reverse (-)
1120344 .. 1123207
2864 bp
Loading structure...
UTR
Exon/CDS
Intron
Rw1G000790.1

Sequence Viewer

Length: 2724 bp
ATGGATATCTATGTTTACTTTAACCCTATCTCTCGCCTCATTCTTCACTTCTTGCTCTTGTTATTTTTGGCATCTTCGTGCCTAAACAATTGCAGTGTCGTGGTGGAATCATGCATGGAGGAAGAAAGGCGAGCACTTCTCAGCTTTAAACAAGATCTCAGTGATCCTTCTGGTAAGCTTTCTTCTTGGGCTGGTCACGAATGCTGCCAATGGACAGGGATTTCATGCAACAACCGCACTGGTCATGTTGCAACGGTTGACCTCCGTAATACATATCTAGACATCACTAGTGATGATCAGTGGAACATCACGGAGTATGAAGAATCTTGTTTGGGGGGTAAGTTAATTAATCCTTCTTTGCTTGGCTTGAAACATTTGAGTTACTTAGACTTGAGCTCGAATGATTTTCAAGGGACTCACATTCCCAAGTTTATTGGGGAGCTTACAAGTCTGAGATATCTCAATTTTTCAAGTACCCGGTCTTTGAATTCAATTGTGGGAGAGATTCCTTCTTCTCTTGGTAACCTTACAAACTTGAACTATCTTGACCTCAGTTCTCAGTATTCTCTTTCTTCCAAAAACTTGAATTGGCTTTCTCATCTCTCTTCCCTAAAATACCTCAATCTTAGAGGTGCGAACCTTAGCAGCACAGGAGTTAAGTTGTATTTGTCTGATTGCCTAATTGATGGAAACCAGCTTCCACTCTCCATGACTACAATTAACTCCACATCACTTTTGGTCCTTGATATGTCATGGAATAGTATTAATTTTTCATATCCTAAATGGATGTTTAATCTTACTAGCCTTACAAAAGTTGATCTGAGTTGGAATTCTGTCAGTGGCCCCTTTCTTGATGAATTTGTAAGACTCAAATCTCTAGAACACCTTGACTTAAAGGATGTAGGATTCAAAGGTCAATTTCCCAAATTTAGTGGAAATTTGTGCAGGCTCAAGTCATTAAGTCTTGCATGGAATCAAATTGATGGGGGGATTGAAGAGTTTTTGAGTGGTTTCTCAAATTGTTCATTTAATAGAATGGAGTCACTAGATTTATCTGACTGTGGGCTGGTAGGCAAATTGCCTAGTTCGTTGGGAATGCTGAGAAGCCTGCAGCATCTCGATCTCAGCTACAACTCTTTTTGGGGATCCATTCCAGAATTTATCATCAGCAATTTATCATCATCCCTGAAGACACTTGATCTCAGGTATAATATTTTCAACAGTTCCATTGCTCAAAGTTTGGGAAAACTTTCTCAGCTAGTGAGCCTTTATCTATCTTATAATTCATGGGAAGGCAATTTAACCGAAGCCCATTTCATAAATCTCACAAAATTAGAGTCTTTTGCAGTTAGCACAGCCCAACCTGTGCCCATCATTTTCAATTTGATTGATTATGAATGGATTCCTCCTTTCAAGCTCCACCGCATTGAAATGCACAACTGCCGAGTAGGACCCGGCTTCCCTGTATGGCTTCAATCTCAAACTGAGCTCGTGTCGGTCTCACTTGAGAATGCTGGACTCTCGGGTGCAATACCAGAGGAATGGCTCTTTAAGATATCTTCCCAGATCCAATCGTTGGATTTATCTTACAATCAAATAAGTGGAAAGCTTCCGTTCCGATTCAACTCTTTTCCCAATCTGGAGTCCATAGTTCTGAGCCATAATCAATTTGATGGCACTATTCCATCATCTATTTGTAGCATTCAATCTCTATATACCCTTGCTCTGAATAACAATCAGTTATCCGGAGAATTCCCTAAAGAATGGAGTTTGTGGAGCAGCATAATCACTGTGGATGTCTCAAACAACAATATGTCTGGTAATATTCCAAGCTCAATGGGCATTCCAAGTTTTCTTGCAATACTAAAGATAGACAACAATCAATTTAGCGGAGAAATTCCTTCGGCCTTGCAAAATTGCTCACGTTTGCAGAGACTTTATCTTGGAGGCAACAAATTTACTGGAAGCATACCTTCTTGGATAGGATCAAAAGTATCCACATTCACAGTGCTGCAATTGCAATCAAACTCTTTAAGTGGACATATTCCTCATCATTTGTGCAGTCTTCCTTCCCTTCGGATCCTAGACCTTAGTCACAATAGATTTTTAGGGACTATTCCCAACTGTTTGAATAAATTGACTTCTTTAATCGATGGTCCTTGGAAGTGGTCCTACTCTGGTGATTTTGAGGTAATAACTGTGACTGTAAAAGGAAGAGCAAGTGAATACTCCTCACGCAACGAGGTGCTTCTAACCATTATTGATTTTTCGCATAATGATTTAGAAGGTGAAATTCCCGAAGAAATCAGCAGTCTCAACCAGCTTTCAGGACAGATTCCACAAAGTCTCGCTTCTCTGACCTTCTTATCTCACTTGAACTTGTCTTGCAACAACTTGACCGGAAGAATTCCTTCGGGCAACCAATTTCAGACGCTCGATGATTCATCTATTTATAAGGGAAATCCTTCACTCTGTGGATTTCCTCTTTCAAAATGCCCAGAAGTTGGAGGCGACATGCATGAGACTCATGAAGCTGATGATGAAAAGCTTGGTTTATATACCAGCGCGGTGCTTGGCTTTATCATAGGCTTTTGGAGTGTTTGTGGCACATTGATATTGAAGAAGTCATGGAGGTATGCTTATTTTCAATTTTTTGACCACATCAAAGAGAAAGTAGCACTAGCAATTGCATTGAAAGTAGCTTGTTTGAAAGCAAGGCAGTGA

Protein Analysis

907

Amino Acids

101.03

Weight (kDa)

5.74

Isoelectric Point (pI)

39.83

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
LRRNT_2 PF08263 40 - 77 1.9e-12 Leucine rich repeat N-terminal domain
LRR_14 PF23598 118 - 186 3e-06 Leucine-rich repeat region
LRR_14 PF23598 312 - 498 4.1e-12 Leucine-rich repeat region
LRR_4 PF12799 522 - 556 9.2e-06 Leucine Rich repeats (2 copies)
LRR_14 PF23598 523 - 700 6.2e-07 Leucine-rich repeat region
LRR_8 PF13855 641 - 702 4.6e-08 Leucine rich repeat
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready

Orthologous Genes (Group: OG0000048)

Species Orthologous Gene IDs
arabidopsis_thaliana AT2G34930
fragaria_vesca FvH4_3g12670 FvH4_3g12672 FvH4_3g12740 FvH4_3g12742 FvH4_3g12770 FvH4_3g12770 FvH4_3g12860 FvH4_3g12890 FvH4_3g13431 FvH4_3g13433 FvH4_3g13435 FvH4_3g13470 FvH4_3g13470 FvH4_3g13480 FvH4_3g13562 FvH4_3g13580 FvH4_3g13600 FvH4_3g13600 FvH4_3g13600 FvH4_3g13600 FvH4_3g13600 FvH4_3g13600 FvH4_3g13610 FvH4_3g13620 FvH4_3g13620 FvH4_3g23240 FvH4_3g32910 FvH4_3g35070 FvH4_3g45520 FvH4_5g08430 FvH4_5g08450 FvH4_6g53230 FvH4_6g53300
malus_domestica MD05G1217600.v1.1 MD05G1217700.v1.1 MD05G1224700.v1.1 MD05G1225100.v1.1 MD05G1225300.v1.1 MD05G1225400.v1.1 MD05G1235900.v1.1 MD05G1236100.v1.1 MD05G1236300.v1.1 MD05G1237200.v1.1 MD05G1241600.v1.1 MD05G1245700.v1.1 MD05G1245800.v1.1 MD05G1245900.v1.1 MD05G1246000.v1.1 MD05G1246100.v1.1 MD05G1246300.v1.1 MD05G1246400.v1.1 MD05G1246500.v1.1 MD05G1248100.v1.1 MD05G1248200.v1.1 MD05G1264300.v1.1 MD05G1275900.v1.1 MD07G1051400.v1.1 MD09G1012600.v1.1 MD09G1012700.v1.1 MD09G1012800.v1.1 MD10G1221400.v1.1 MD10G1221500.v1.1 MD10G1221600.v1.1 MD10G1221900.v1.1 MD10G1222200.v1.1 MD10G1222400.v1.1 MD10G1222500.v1.1 MD10G1222900.v1.1 MD10G1223000.v1.1 MD10G1223100.v1.1 MD10G1223500.v1.1 MD10G1228000.v1.1 MD12G1019600.v1.1 MD12G1020000.v1.1 MD12G1020100.v1.1 MD17G1013200.v1.1 MD17G1013300.v1.1 MD17G1013400.v1.1
prunus_persica Prupe.1G060500_v2.0.a1 Prupe.1G100100_v2.0.a1 Prupe.3G124000_v2.0.a1 Prupe.3G304400_v2.0.a1 Prupe.4G116800_v2.0.a1 Prupe.4G116900_v2.0.a1 Prupe.4G117000_v2.0.a1 Prupe.4G121800_v2.0.a1 Prupe.4G121900_v2.0.a1 Prupe.4G122000_v2.0.a1 Prupe.4G122100_v2.0.a1 Prupe.4G122200_v2.0.a1 Prupe.4G122300_v2.0.a1 Prupe.4G122500_v2.0.a1 Prupe.4G122600_v2.0.a1 Prupe.4G122800_v2.0.a1 Prupe.4G122900_v2.0.a1 Prupe.4G123000_v2.0.a1 Prupe.4G123100_v2.0.a1 Prupe.4G123200_v2.0.a1 Prupe.4G131500_v2.0.a1 Prupe.4G131600_v2.0.a1 Prupe.7G032500_v2.0.a1 Prupe.7G032900_v2.0.a1 Prupe.7G033000_v2.0.a1 Prupe.7G033100_v2.0.a1 Prupe.7G033300_v2.0.a1 Prupe.7G033600_v2.0.a1 Prupe.7G034600_v2.0.a1 Prupe.7G040200_v2.0.a1 Prupe.7G059200_v2.0.a1
pyrus_communis pycom05g20580 pycom05g20590 pycom05g20760 pycom05g20800 pycom05g21280 pycom05g21290 pycom05g21820 pycom05g21830 pycom05g22180 pycom05g22190 pycom05g22210 pycom05g22450 pycom05g22460 pycom05g22470 pycom05g22480 pycom05g22490 pycom05g23770 pycom05g23780 pycom05g24050 pycom05g24060 pycom07g03910 pycom10g18700 pycom10g18720 pycom10g18730 pycom10g18740 pycom10g19150 pycom111g01060 pycom12g01660 pycom12g01690 pycom12g01720 pycom12g01740 pycom12g01750 pycom12g01770 pycom12g01810 pycom12g01820 pycom12g01830 pycom12g01840 pycom12g01870 pycom12g01900 pycom17g01060 pycom17g01070
rosa_chinensis RchiOBHm_Chr1g0315041 RchiOBHm_Chr1g0315051 RchiOBHm_Chr1g0315071 RchiOBHm_Chr1g0315161 RchiOBHm_Chr1g0315211 RchiOBHm_Chr1g0315251 RchiOBHm_Chr1g0315321 RchiOBHm_Chr1g0315391 RchiOBHm_Chr1g0315451 RchiOBHm_Chr1g0315481 RchiOBHm_Chr1g0315551 RchiOBHm_Chr1g0315601 RchiOBHm_Chr1g0315621 RchiOBHm_Chr1g0359221 RchiOBHm_Chr2g0142981 RchiOBHm_Chr2g0143001 RchiOBHm_Chr2g0143061 RchiOBHm_Chr2g0143091 RchiOBHm_Chr2g0175321 RchiOBHm_Chr2g0175341 RchiOBHm_Chr2g0175361 RchiOBHm_Chr2g0175371 RchiOBHm_Chr3g0470491 RchiOBHm_Chr3g0480881 RchiOBHm_Chr3g0485511 RchiOBHm_Chr5g0020741 RchiOBHm_Chr5g0020901 RchiOBHm_Chr5g0020931 RchiOBHm_Chr5g0020941 RchiOBHm_Chr5g0020961 RchiOBHm_Chr5g0020971 RchiOBHm_Chr5g0021451 RchiOBHm_Chr5g0021531 RchiOBHm_Chr5g0021831 RchiOBHm_Chr5g0021841 RchiOBHm_Chr5g0021931 RchiOBHm_Chr5g0021941 RchiOBHm_Chr5g0021981 RchiOBHm_Chr5g0021991 RchiOBHm_Chr5g0022011 RchiOBHm_Chr5g0022181 RchiOBHm_Chr5g0022191 RchiOBHm_Chr5g0022211 RchiOBHm_Chr5g0022221 RchiOBHm_Chr5g0022231 RchiOBHm_Chr5g0022291 RchiOBHm_Chr5g0022301 RchiOBHm_Chr5g0022331 RchiOBHm_Chr5g0022361 RchiOBHm_Chr5g0022371 RchiOBHm_Chr5g0022381 RchiOBHm_Chr5g0022401 RchiOBHm_Chr5g0022431 RchiOBHm_Chr5g0022451 RchiOBHm_Chr5g0022541 RchiOBHm_Chr5g0022591 RchiOBHm_Chr5g0022601 RchiOBHm_Chr5g0022701 RchiOBHm_Chr5g0022741 RchiOBHm_Chr5g0022791 RchiOBHm_Chr5g0022811 RchiOBHm_Chr5g0022851 RchiOBHm_Chr5g0029441 RchiOBHm_Chr5g0041631 RchiOBHm_Chr5g0069391 RchiOBHm_Chr6g0273811 RchiOBHm_Chr6g0273831 RchiOBHm_Chr6g0275331 RchiOBHm_Chr7g0219061
rosa_laevigata RLG00000002463 RLG00000020007 RLG00000020008 RLG00000022320 RLG00000022321 RLG00000023446 RLG00000030742 RLG00000030743 RLG00000030747 RLG00000032557 RLG00000032564 RLG00000032571 RLG00000032573 RLG00000032574 RLG00000032612 RLG00000032633 RLG00000032636 RLG00000032638 RLG00000032650 RLG00000032651 RLG00000032652 RLG00000032653 RLG00000032655 RLG00000032673 RLG00000032678 RLG00000032769 RLG00000032857 RLG00000033168 RLG00000033465 RLG00000034086 RLG00000034222 RLG00000035290
rosa_multiflora Rmu_co8143358.1_g000001 Rmu_co8518791.1_g000001 Rmu_sc0000178.1_g000008 Rmu_sc0000178.1_g000014 Rmu_sc0000401.1_g000005 Rmu_sc0000401.1_g000013 Rmu_sc0000401.1_g000017 Rmu_sc0000401.1_g000018 Rmu_sc0000401.1_g000024 Rmu_sc0000401.1_g000025 Rmu_sc0000576.1_g000020 Rmu_sc0001585.1_g000003 Rmu_sc0001585.1_g000005 Rmu_sc0001585.1_g000008 Rmu_sc0001784.1_g000006 Rmu_sc0001784.1_g000011 Rmu_sc0001784.1_g000022 Rmu_sc0001784.1_g000028 Rmu_sc0002052.1_g000004 Rmu_sc0002052.1_g000011 Rmu_sc0002277.1_g000003 Rmu_sc0002277.1_g000006 Rmu_sc0002277.1_g000024 Rmu_sc0002658.1_g000012 Rmu_sc0003512.1_g000004 Rmu_sc0003512.1_g000007 Rmu_sc0004180.1_g000016 Rmu_sc0004180.1_g000029 Rmu_sc0004180.1_g000034 Rmu_sc0005639.1_g000008 Rmu_sc0005639.1_g000023 Rmu_sc0006070.1_g000016 Rmu_sc0006070.1_g000017 Rmu_sc0006966.1_g000021 Rmu_sc0006966.1_g000023 Rmu_sc0007239.1_g000003 Rmu_sc0008460.1_g000010 Rmu_sc0009984.1_g000008 Rmu_sc0010181.1_g000005 Rmu_sc0010181.1_g000010 Rmu_sc0010503.1_g000006 Rmu_sc0011646.1_g000003 Rmu_sc0012984.1_g000011 Rmu_sc0016972.1_g000005 Rmu_sc0016972.1_g000008 Rmu_sc0023070.1_g000003 Rmu_sc0025660.1_g000001 Rmu_ssc0000322.1_g000019
rosa_roxburghii Rroxscaffold_1G00038860 Rroxscaffold_1G00053490 Rroxscaffold_1G00053500 Rroxscaffold_1G00054230 Rroxscaffold_1G00056460 Rroxscaffold_1G00056470 Rroxscaffold_1G00056480 Rroxscaffold_1G00056500 Rroxscaffold_1G00056510 Rroxscaffold_1G00056620 Rroxscaffold_1G00056690 Rroxscaffold_1G00056710 Rroxscaffold_1G00056720 Rroxscaffold_1G00056730 Rroxscaffold_1G00056740 Rroxscaffold_1G00056750 Rroxscaffold_1G00056760 Rroxscaffold_1G00056870 Rroxscaffold_1G00056900 Rroxscaffold_1G00057120 Rroxscaffold_1G00057560 Rroxscaffold_2G00077430 Rroxscaffold_2G00102160 Rroxscaffold_3G00231420 Rroxscaffold_3G00231430 Rroxscaffold_4G00297230 Rroxscaffold_4G00331570 Rroxscaffold_6G00396700 Rroxscaffold_6G00400940 Rroxscaffold_7G00192740
rosa_rugosa Rorug01G0004400 Rorug01G0004500 Rorug02G0377600 Rorug02G0378000 Rorug02G0582800 Rorug02G0583400 Rorug03G0187000 Rorug03G0218800 Rorug04G0081200 Rorug05G0062700 Rorug05G0062700 Rorug05G0063100 Rorug05G0063200 Rorug05G0063200 Rorug05G0063200 Rorug05G0067000 Rorug05G0069700 Rorug05G0069900 Rorug05G0070000 Rorug05G0070100 Rorug05G0070300 Rorug05G0070400 Rorug05G0070600 Rorug05G0070600 Rorug05G0072300 Rorug05G0072400 Rorug05G0072500 Rorug05G0072500 Rorug05G0072600.1 Rorug05G0072700 Rorug05G0072800 Rorug05G0072800 Rorug05G0072900 Rorug05G0073000 Rorug05G0073000 Rorug05G0073400 Rorug05G0073400 Rorug05G0073400 Rorug05G0074800 Rorug05G0075000 Rorug05G0114300 Rorug05G0194200 Rorug06G0097800
rosa_samantha Rh2AG401400 Rh2CG387600 Rh2CG417000 Rh2CG637400 Rh5CG169600 Rh5CG172100 Rh5CG175200 Rh5CG317100 Rh6DG187900
rosa_wichuraiana Rw1G000750 Rw1G000790 Rw1G000820 Rw1G000860 Rw1G000880 Rw1G000910 Rw2G035180 Rw2G035200 Rw2G035240 Rw2G054370 Rw2G054380 Rw5G013570 Rw5G013580 Rw5G013590 Rw5G013910 Rw5G013980 Rw5G014110 Rw5G014120 Rw5G014280 Rw5G014310 Rw5G014400 Rw5G014420 Rw5G014440 Rw5G014460 Rw5G014480 Rw5G014500 Rw5G014520 Rw5G014530 Rw5G042390

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 2 cut(s) 1281, 2454
AccB7I CCANNNNNTGG 2 cut(s) 1576, 2504
AccII CGCG 1 cut(s) 2567
AccIII TCCGGA 1 cut(s) 1745
AciI CCGC 4 cut(s) 235, 1423, 1890, 2567
AclWI GGATC 7 cut(s) 158, 1140, 1153, 1561, 1993, 2074, 2087
AcuI CTGAAG 1 cut(s) 1208
AdeI CACNNNGTG 1 cut(s) 2474
AfaI GTAC 1 cut(s) 475
AfiI CCNNNNNNNGG 2 cut(s) 1576, 2504
AhlI ACTAGT 1 cut(s) 287
Alw21I GWGCWC 3 cut(s) 136, 398, 1491
Alw26I GTCTC 6 cut(s) 1504, 1804, 1927, 2318, 2351, 2516
AlwI GGATC 7 cut(s) 158, 1140, 1153, 1561, 1993, 2074, 2087
Ama87I CYCGRG 1 cut(s) 1522
Aor13HI TCCGGA 1 cut(s) 1745
AoxI GGCC 2 cut(s) 841, 1905
ApeKI GCWGC 5 cut(s) 204, 645, 1111, 1779, 2011
ArsI GACNNNNNNTTYG 2 cut(s) 1322, 1354
AseI ATTAAT 2 cut(s) 348, 765
Asp700I GAANNNNTTC 4 cut(s) 1249, 1401, 2410, 2464
AspLEI GCGC 1 cut(s) 2567
AspS9I GGNCC 5 cut(s) 739, 842, 1451, 2156, 2169
AsuC2I CCSGG 2 cut(s) 478, 1455
AsuHPI GGTGA 2 cut(s) 2192, 2300
AvaI CYCGRG 1 cut(s) 1522
AvaII GGWCC 4 cut(s) 739, 1451, 2156, 2169
BaeGI GKGCMC 1 cut(s) 1371
BamHI GGATCC 2 cut(s) 1145, 2079
BanII GRGCYC 2 cut(s) 398, 1491
BarI GAAGNNNNNNTAC 4 cut(s) 166, 198, 2156, 2188
BauI CACGAG 1 cut(s) 1490
BbsI GAAGAC 2 cut(s) 1196, 2057
Bbv12I GWGCWC 3 cut(s) 136, 398, 1491
BbvI GCAGC 5 cut(s) 191, 657, 1123, 1791, 1998
BccI CCATC 6 cut(s) 680, 977, 1379, 1667, 1693, 2147
BciVI GTATCC 1 cut(s) 2005
BclI TGATCA 1 cut(s) 295
BcnI CCSGG 2 cut(s) 478, 1455
BcoDI GTCTC 6 cut(s) 1504, 1804, 1927, 2318, 2351, 2516
BcuI ACTAGT 1 cut(s) 287
BfaI CTAG 9 cut(s) 278, 288, 801, 878, 1046, 1083, 1259, 2084, 2681
BfmI CTRYAG 1 cut(s) 1109
BfuI GTATCC 1 cut(s) 2005
BglII AGATCT 1 cut(s) 154
BisI GCNGC 5 cut(s) 205, 646, 1112, 1780, 2012
BlsI GCNGC 5 cut(s) 206, 647, 1113, 1781, 2013
Bme1390I CCNGG 2 cut(s) 478, 1455
Bme18I GGWCC 4 cut(s) 739, 1451, 2156, 2169
BmeT110I CYCGRG 1 cut(s) 1522
BmgT120I GGNCC 5 cut(s) 739, 842, 1451, 2156, 2169
BmiI GGNNCC 4 cut(s) 844, 1147, 1453, 2081
BmrFI CCNGG 2 cut(s) 478, 1455
BmsI GCATC 2 cut(s) 80, 1123
BoxI GACNNNNGTC 1 cut(s) 2091
BpiI GAAGAC 2 cut(s) 1196, 2057
BplI GAGNNNNNCTC 2 cut(s) 123, 155
BpmI CTGGAG 1 cut(s) 1661
Bpu10I CCTNAGC 1 cut(s) 641
BpuEI CTTGAG 3 cut(s) 412, 935, 1526
BpuMI CCSGG 2 cut(s) 478, 1455
Bsa29I ATCGAT 1 cut(s) 2151
BsaI GGTCTC 1 cut(s) 1504
BsaJI CCNNGG 1 cut(s) 2159
BsaWI WCCGGW 2 cut(s) 1745, 2399
BsaXI ACNNNNNCTCC 2 cut(s) 2587, 2617
Bsc4I CCNNNNNNNGG 2 cut(s) 1576, 2504
Bse1I ACTGG 2 cut(s) 244, 1966
Bse3DI GCAATG 1 cut(s) 1227
BseAI TCCGGA 1 cut(s) 1745
BseCI ATCGAT 1 cut(s) 2151
BseDI CCNNGG 1 cut(s) 2159
BseGI GGATG 4 cut(s) 792, 904, 1181, 1801
BseLI CCNNNNNNNGG 2 cut(s) 1576, 2504
BseMI GCAATG 1 cut(s) 1227
BseNI ACTGG 2 cut(s) 244, 1966
BseRI GAGGAG 1 cut(s) 2221
BseSI GKGCMC 1 cut(s) 1371
BseXI GCAGC 5 cut(s) 191, 657, 1123, 1791, 1998
BsgI GTGCAG 2 cut(s) 964, 2080
Bsh1236I CGCG 1 cut(s) 2567
BshFI GGCC 2 cut(s) 843, 1907
BshVI ATCGAT 1 cut(s) 2151
BsiHKAI GWGCWC 3 cut(s) 136, 398, 1491
BsiHKCI CYCGRG 1 cut(s) 1522
BsiSI CCGG 4 cut(s) 478, 1455, 1746, 2400
BslFI GGGAC 2 cut(s) 427, 2125
BslI CCNNNNNNNGG 2 cut(s) 1576, 2504
BsmAI GTCTC 6 cut(s) 1504, 1804, 1927, 2318, 2351, 2516
BsmFI GGGAC 2 cut(s) 427, 2125
BsmI GAATGC 5 cut(s) 206, 1101, 1516, 1701, 1842
BsnI GGCC 2 cut(s) 843, 1907
Bso31I GGTCTC 1 cut(s) 1504
BsoBI CYCGRG 1 cut(s) 1522
Bsp1286I GDGCHC 4 cut(s) 136, 398, 1371, 1491
Bsp13I TCCGGA 1 cut(s) 1745
BspACI CCGC 4 cut(s) 235, 1423, 1890, 2567
BspANI GGCC 2 cut(s) 843, 1907
BspDI ATCGAT 1 cut(s) 2151
BspEI TCCGGA 1 cut(s) 1745
BspFNI CGCG 1 cut(s) 2567
BspHI TCATGA 1 cut(s) 2527
BspLI GGNNCC 4 cut(s) 844, 1147, 1453, 2081
BspMAI CTGCAG 1 cut(s) 1113
BspPI GGATC 7 cut(s) 158, 1140, 1153, 1561, 1993, 2074, 2087
BspQI GCTCTTC 1 cut(s) 2209
BspTNI GGTCTC 1 cut(s) 1504
BsrDI GCAATG 1 cut(s) 1227
BsrI ACTGG 2 cut(s) 244, 1966
BssECI CCNNGG 1 cut(s) 2159
BssSI CACGAG 1 cut(s) 1490
BssT1I CCWWGG 1 cut(s) 2159
Bst2BI CACGAG 1 cut(s) 1490
Bst4CI ACNGT 8 cut(s) 256, 1061, 1223, 1792, 2008, 2126, 2200, 2206
Bst6I CTCTTC 3 cut(s) 610, 990, 2209
BstC8I GCNNGC 3 cut(s) 132, 947, 1109
BstEII GGTNACC 1 cut(s) 521
BstF5I GGATG 4 cut(s) 792, 904, 1181, 1801
BstFNI CGCG 1 cut(s) 2567
BstHHI GCGC 1 cut(s) 2567
BstMAI GTCTC 6 cut(s) 1504, 1804, 1927, 2318, 2351, 2516
BstMWI GCNNNNNNNGC 3 cut(s) 234, 1839, 2017
BstNSI RCATGY 1 cut(s) 2518
BstPAI GACNNNNGTC 1 cut(s) 2091
BstPI GGTNACC 1 cut(s) 521
BstSCI CCNGG 2 cut(s) 476, 1453
BstSFI CTRYAG 1 cut(s) 1109
BstSLI GKGCMC 1 cut(s) 1371
BstUI CGCG 1 cut(s) 2567
BstV1I GCAGC 5 cut(s) 191, 657, 1123, 1791, 1998
BstV2I GAAGAC 2 cut(s) 1196, 2057
BstX2I RGATCY 4 cut(s) 154, 1145, 1566, 2079
BstXI CCANNNNNNTGG 1 cut(s) 1542
BstYI RGATCY 4 cut(s) 154, 1145, 1566, 2079
Bsu15I ATCGAT 1 cut(s) 2151
BsuI GTATCC 1 cut(s) 2005
BsuRI GGCC 2 cut(s) 843, 1907
BsuTUI ATCGAT 1 cut(s) 2151
BtsCI GGATG 4 cut(s) 792, 904, 1181, 1801
BtsI GCAGTG 1 cut(s) 100
BtsIMutI CAGTG 7 cut(s) 100, 166, 237, 305, 844, 1788, 2013
Cac8I GCNNGC 3 cut(s) 132, 947, 1109
CciI TCATGA 1 cut(s) 2527
CfoI GCGC 1 cut(s) 2567
Cfr13I GGNCC 5 cut(s) 739, 842, 1451, 2156, 2169
ClaI ATCGAT 1 cut(s) 2151
CseI GACGC 1 cut(s) 2440
Csp6I GTAC 1 cut(s) 474
CspCI CAANNNNNGTGG 2 cut(s) 913, 948
CviQI GTAC 1 cut(s) 474
DraI TTTAAA 1 cut(s) 148
DraIII CACNNNGTG 1 cut(s) 2474
Eam1104I CTCTTC 3 cut(s) 610, 990, 2209
EarI CTCTTC 3 cut(s) 610, 990, 2209
Ecl136II GAGCTC 2 cut(s) 396, 1489
Eco130I CCWWGG 1 cut(s) 2159
Eco24I GRGCYC 2 cut(s) 398, 1491
Eco31I GGTCTC 1 cut(s) 1504
Eco32I GATATC 3 cut(s) 7, 458, 1557
Eco47I GGWCC 4 cut(s) 739, 1451, 2156, 2169
Eco53kI GAGCTC 2 cut(s) 396, 1489
Eco57I CTGAAG 1 cut(s) 1208
Eco88I CYCGRG 1 cut(s) 1522
Eco91I GGTNACC 1 cut(s) 521
EcoICRI GAGCTC 2 cut(s) 396, 1489
EcoO109I RGGNCCY 1 cut(s) 1451
EcoO65I GGTNACC 1 cut(s) 521
EcoRI GAATTC 4 cut(s) 487, 829, 1751, 2406
EcoRV GATATC 3 cut(s) 7, 458, 1557
EcoT14I CCWWGG 1 cut(s) 2159
EcoT22I ATGCAT 2 cut(s) 116, 2520
EcoT38I GRGCYC 2 cut(s) 398, 1491
ErhI CCWWGG 1 cut(s) 2159
FalI AAGNNNNNCTT 6 cut(s) 1957, 1989, 2335, 2367, 2395, 2427
FaqI GGGAC 2 cut(s) 427, 2125
FbaI TGATCA 1 cut(s) 295
Fnu4HI GCNGC 5 cut(s) 205, 646, 1112, 1780, 2012
FokI GGATG 4 cut(s) 799, 911, 1168, 1808
FriOI GRGCYC 2 cut(s) 398, 1491
Fsp4HI GCNGC 5 cut(s) 205, 646, 1112, 1780, 2012
FspBI CTAG 9 cut(s) 278, 288, 801, 878, 1046, 1083, 1259, 2084, 2681
GlaI GCGC 1 cut(s) 2566
GluI GCNGC 5 cut(s) 205, 646, 1112, 1780, 2012
GsuI CTGGAG 1 cut(s) 1661
HaeIII GGCC 2 cut(s) 843, 1907
HapII CCGG 4 cut(s) 478, 1455, 1746, 2400
HgaI GACGC 1 cut(s) 2440
HhaI GCGC 1 cut(s) 2567
Hin6I GCGC 1 cut(s) 2565
HinP1I GCGC 1 cut(s) 2565
HincII GTYRAC 1 cut(s) 259
HindII GTYRAC 1 cut(s) 259
HindIII AAGCTT 3 cut(s) 176, 1607, 2546
HpaII CCGG 4 cut(s) 478, 1455, 1746, 2400
HphI GGTGA 2 cut(s) 2192, 2300
Hpy166II GTNNAC 3 cut(s) 16, 259, 2039
Hpy8I GTNNAC 3 cut(s) 16, 259, 2039
HpyCH4III ACNGT 8 cut(s) 256, 1061, 1223, 1792, 2008, 2126, 2200, 2206
HpyCH4IV ACGT 1 cut(s) 1924
HpyF10VI GCNNNNNNNGC 3 cut(s) 234, 1839, 2017
HpySE526I ACGT 1 cut(s) 1924
HspAI GCGC 1 cut(s) 2565
Kpn2I TCCGGA 1 cut(s) 1745
Ksp22I TGATCA 1 cut(s) 295
LguI GCTCTTC 1 cut(s) 2209
LmnI GCTCC 3 cut(s) 439, 1422, 1776
Lsp1109I GCAGC 5 cut(s) 191, 657, 1123, 1791, 1998
LweI GCATC 2 cut(s) 80, 1123
MaeI CTAG 9 cut(s) 278, 288, 801, 878, 1046, 1083, 1259, 2084, 2681
MaeII ACGT 1 cut(s) 1924
MaeIII GTNAC 6 cut(s) 194, 380, 521, 1041, 2093, 2200
MfeI CAATTG 4 cut(s) 88, 492, 2015, 2685
MflI RGATCY 4 cut(s) 154, 1145, 1566, 2079
MhlI GDGCHC 4 cut(s) 136, 398, 1371, 1491
MlyI GAGTC 7 cut(s) 409, 861, 1049, 1346, 1512, 1652, 2518
MmeI TCCRAC 3 cut(s) 806, 1557, 2485
Mph1103I ATGCAT 2 cut(s) 116, 2520
MroI TCCGGA 1 cut(s) 1745
MroXI GAANNNNTTC 4 cut(s) 1249, 1401, 2410, 2464
MslI CAYNNNNRTG 2 cut(s) 76, 1430
MspI CCGG 4 cut(s) 478, 1455, 1746, 2400
MspR9I CCNGG 2 cut(s) 478, 1455
MunI CAATTG 4 cut(s) 88, 492, 2015, 2685
Mva1269I GAATGC 5 cut(s) 206, 1101, 1516, 1701, 1842
MvnI CGCG 1 cut(s) 2567
MwoI GCNNNNNNNGC 3 cut(s) 234, 1839, 2017
NciI CCSGG 2 cut(s) 478, 1455
NlaIV GGNNCC 4 cut(s) 844, 1147, 1453, 2081
NmeAIII GCCGAG 1 cut(s) 1469
NmuCI GTSAC 4 cut(s) 194, 1041, 2093, 2200
NsiI ATGCAT 2 cut(s) 116, 2520
NspI RCATGY 1 cut(s) 2518
PacI TTAATTAA 1 cut(s) 348
PagI TCATGA 1 cut(s) 2527
PciSI GCTCTTC 1 cut(s) 2209
PctI GAATGC 5 cut(s) 206, 1101, 1516, 1701, 1842
PdmI GAANNNNTTC 4 cut(s) 1249, 1401, 2410, 2464
PfeI GAWTC 9 cut(s) 107, 323, 505, 906, 973, 1402, 1620, 2335, 2441
PflMI CCANNNNNTGG 2 cut(s) 1576, 2504
PkrI GCNGC 5 cut(s) 206, 647, 1113, 1781, 2013
PleI GAGTC 7 cut(s) 409, 861, 1048, 1345, 1512, 1651, 2518
PpsI GAGTC 7 cut(s) 409, 861, 1048, 1345, 1512, 1651, 2518
PpuMI RGGWCCY 1 cut(s) 1451
PshAI GACNNNNGTC 1 cut(s) 2091
PshBI ATTAAT 2 cut(s) 348, 765
PsiI TTATAA 2 cut(s) 1281, 2454
Psp124BI GAGCTC 2 cut(s) 398, 1491
Psp5II RGGWCCY 1 cut(s) 1451
PspEI GGTNACC 1 cut(s) 521
PspN4I GGNNCC 4 cut(s) 844, 1147, 1453, 2081
PspPI GGNCC 5 cut(s) 739, 842, 1451, 2156, 2169
PspPPI RGGWCCY 1 cut(s) 1451
PstI CTGCAG 1 cut(s) 1113
PsuI RGATCY 4 cut(s) 154, 1145, 1566, 2079
RsaI GTAC 1 cut(s) 475
RsaNI GTAC 1 cut(s) 474
RseI CAYNNNNRTG 2 cut(s) 76, 1430
SacI GAGCTC 2 cut(s) 398, 1491
SapI GCTCTTC 1 cut(s) 2209
SatI GCNGC 5 cut(s) 205, 646, 1112, 1780, 2012
Sau96I GGNCC 5 cut(s) 739, 842, 1451, 2156, 2169
SchI GAGTC 7 cut(s) 409, 861, 1049, 1346, 1512, 1652, 2518
ScrFI CCNGG 2 cut(s) 478, 1455
SduI GDGCHC 4 cut(s) 136, 398, 1371, 1491
SfaNI GCATC 2 cut(s) 80, 1123
SfcI CTRYAG 1 cut(s) 1109
SinI GGWCC 4 cut(s) 739, 1451, 2156, 2169
SmiMI CAYNNNNRTG 2 cut(s) 76, 1430
SmlI CTYRAG 3 cut(s) 391, 950, 1505
SmoI CTYRAG 3 cut(s) 391, 950, 1505
SpeI ACTAGT 1 cut(s) 287
SsiI CCGC 4 cut(s) 235, 1423, 1890, 2567
SspI AATATT 2 cut(s) 1213, 1825
SspMI CTAG 9 cut(s) 278, 288, 801, 878, 1046, 1083, 1259, 2084, 2681
SstI GAGCTC 2 cut(s) 398, 1491
StyD4I CCNGG 2 cut(s) 476, 1453
StyI CCWWGG 1 cut(s) 2159
TaaI ACNGT 8 cut(s) 256, 1061, 1223, 1792, 2008, 2126, 2200, 2206
TaiI ACGT 1 cut(s) 1927
TaqI TCGA 4 cut(s) 398, 1119, 2151, 2436
TaqII GACCGA 1 cut(s) 1486
TfiI GAWTC 9 cut(s) 107, 323, 505, 906, 973, 1402, 1620, 2335, 2441
TscAI CASTG 7 cut(s) 100, 166, 244, 305, 844, 1795, 2013
TseFI GTSAC 4 cut(s) 194, 1041, 2093, 2200
TseI GCWGC 5 cut(s) 204, 645, 1111, 1779, 2011
Tsp45I GTSAC 4 cut(s) 194, 1041, 2093, 2200
TspGWI ACGGA 3 cut(s) 254, 326, 1602
TspRI CASTG 7 cut(s) 100, 166, 244, 305, 844, 1795, 2013
Van91I CCANNNNNTGG 2 cut(s) 1576, 2504
VpaK11BI GGWCC 4 cut(s) 739, 1451, 2156, 2169
VspI ATTAAT 2 cut(s) 348, 765
XbaI TCTAGA 2 cut(s) 277, 877
XceI RCATGY 1 cut(s) 2518
XcmI CCANNNNNNNNNTGG 1 cut(s) 733
XmnI GAANNNNTTC 4 cut(s) 1249, 1401, 2410, 2464
XspI CTAG 9 cut(s) 278, 288, 801, 878, 1046, 1083, 1259, 2084, 2681
Zsp2I ATGCAT 2 cut(s) 116, 2520
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.