regulation of response to stimulus
Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| Acc65I | GGTACC | 1 cut(s) | 350 |
| AccB1I | GGYRCC | 1 cut(s) | 350 |
| AclWI | GGATC | 2 cut(s) | 382, 560 |
| AcsI | RAATTY | 2 cut(s) | 57, 531 |
| AcuI | CTGAAG | 2 cut(s) | 342, 522 |
| AfaI | GTAC | 4 cut(s) | 25, 133, 254, 352 |
| AgsI | TTSAA | 5 cut(s) | 89, 358, 374, 502, 554 |
| AjuI | GAANNNNNNNTTGG | 2 cut(s) | 397, 429 |
| AluBI | AGCT | 2 cut(s) | 471, 550 |
| AluI | AGCT | 2 cut(s) | 471, 550 |
| AlwI | GGATC | 2 cut(s) | 382, 560 |
| ApoI | RAATTY | 2 cut(s) | 57, 531 |
| Asp700I | GAANNNNTTC | 1 cut(s) | 535 |
| Asp718I | GGTACC | 1 cut(s) | 350 |
| AsuHPI | GGTGA | 1 cut(s) | 323 |
| BanI | GGYRCC | 1 cut(s) | 350 |
| BarI | GAAGNNNNNNTAC | 2 cut(s) | 145, 177 |
| BccI | CCATC | 2 cut(s) | 35, 598 |
| BfaI | CTAG | 1 cut(s) | 366 |
| BmiI | GGNNCC | 1 cut(s) | 352 |
| BoxI | GACNNNNGTC | 1 cut(s) | 111 |
| Bse1I | ACTGG | 1 cut(s) | 385 |
| BseGI | GGATG | 1 cut(s) | 46 |
| BseNI | ACTGG | 1 cut(s) | 385 |
| BshNI | GGYRCC | 1 cut(s) | 350 |
| Bsp1407I | TGTACA | 1 cut(s) | 252 |
| Bsp143I | GATC | 5 cut(s) | 286, 387, 399, 430, 565 |
| BspLI | GGNNCC | 1 cut(s) | 352 |
| BspPI | GGATC | 2 cut(s) | 382, 560 |
| BspT107I | GGYRCC | 1 cut(s) | 350 |
| BsrGI | TGTACA | 1 cut(s) | 252 |
| BsrI | ACTGG | 1 cut(s) | 385 |
| BssMI | GATC | 5 cut(s) | 286, 387, 399, 430, 565 |
| Bst4CI | ACNGT | 2 cut(s) | 70, 78 |
| BstAUI | TGTACA | 1 cut(s) | 252 |
| BstDEI | CTNAG | 1 cut(s) | 110 |
| BstF5I | GGATG | 1 cut(s) | 46 |
| BstKTI | GATC | 5 cut(s) | 289, 390, 402, 433, 568 |
| BstMBI | GATC | 5 cut(s) | 286, 387, 399, 430, 565 |
| BstMWI | GCNNNNNNNGC | 1 cut(s) | 556 |
| BstPAI | GACNNNNGTC | 1 cut(s) | 111 |
| BstX2I | RGATCY | 1 cut(s) | 387 |
| BstXI | CCANNNNNNTGG | 3 cut(s) | 148, 452, 580 |
| BstYI | RGATCY | 1 cut(s) | 387 |
| BtgZI | GCGATG | 1 cut(s) | 576 |
| BtsCI | GGATG | 1 cut(s) | 46 |
| BtsIMutI | CAGTG | 1 cut(s) | 224 |
| Csp6I | GTAC | 4 cut(s) | 24, 132, 253, 351 |
| CviAII | CATG | 1 cut(s) | 614 |
| CviJI | RGCY | 5 cut(s) | 161, 336, 418, 471, 550 |
| CviKI_1 | RGCY | 5 cut(s) | 161, 336, 418, 471, 550 |
| CviQI | GTAC | 4 cut(s) | 24, 132, 253, 351 |
| DdeI | CTNAG | 1 cut(s) | 110 |
| DpnI | GATC | 5 cut(s) | 288, 389, 401, 432, 567 |
| DpnII | GATC | 5 cut(s) | 286, 387, 399, 430, 565 |
| Eco57I | CTGAAG | 2 cut(s) | 342, 522 |
| EcoRI | GAATTC | 1 cut(s) | 531 |
| FaeI | CATG | 1 cut(s) | 617 |
| FalI | AAGNNNNNCTT | 2 cut(s) | 520, 552 |
| FatI | CATG | 1 cut(s) | 613 |
| FokI | GGATG | 1 cut(s) | 53 |
| FspBI | CTAG | 1 cut(s) | 366 |
| Hin1II | CATG | 1 cut(s) | 617 |
| HindIII | AAGCTT | 1 cut(s) | 469 |
| HinfI | GANTC | 4 cut(s) | 176, 206, 370, 460 |
| HphI | GGTGA | 1 cut(s) | 323 |
| Hpy166II | GTNNAC | 2 cut(s) | 26, 253 |
| Hpy188I | TCNGA | 3 cut(s) | 211, 397, 404 |
| Hpy188III | TCNNGA | 3 cut(s) | 453, 525, 540 |
| Hpy8I | GTNNAC | 2 cut(s) | 26, 253 |
| HpyAV | CCTTC | 4 cut(s) | 14, 234, 402, 546 |
| HpyCH4III | ACNGT | 2 cut(s) | 70, 78 |
| HpyCH4V | TGCA | 3 cut(s) | 73, 81, 412 |
| HpyF10VI | GCNNNNNNNGC | 1 cut(s) | 556 |
| HpyF3I | CTNAG | 1 cut(s) | 110 |
| Hsp92II | CATG | 1 cut(s) | 617 |
| KpnI | GGTACC | 1 cut(s) | 354 |
| Kzo9I | GATC | 5 cut(s) | 286, 387, 399, 430, 565 |
| LpnPI | CCDG | 8 cut(s) | 114, 152, 333, 366, 438, 510, 525, 560 |
| MaeI | CTAG | 1 cut(s) | 366 |
| MaeIII | GTNAC | 1 cut(s) | 113 |
| MalI | GATC | 5 cut(s) | 288, 389, 401, 432, 567 |
| MboI | GATC | 5 cut(s) | 286, 387, 399, 430, 565 |
| MboII | GAAGA | 3 cut(s) | 77, 335, 540 |
| MfeI | CAATTG | 1 cut(s) | 374 |
| MflI | RGATCY | 1 cut(s) | 387 |
| MluCI | AATT | 4 cut(s) | 57, 154, 374, 531 |
| MlyI | GAGTC | 1 cut(s) | 200 |
| MnlI | CCTC | 5 cut(s) | 113, 273, 347, 474, 496 |
| MroXI | GAANNNNTTC | 1 cut(s) | 535 |
| MseI | TTAA | 3 cut(s) | 14, 51, 482 |
| MslI | CAYNNNNRTG | 2 cut(s) | 578, 595 |
| MunI | CAATTG | 1 cut(s) | 374 |
| MwoI | GCNNNNNNNGC | 1 cut(s) | 556 |
| NdeII | GATC | 5 cut(s) | 286, 387, 399, 430, 565 |
| NlaIII | CATG | 1 cut(s) | 617 |
| NlaIV | GGNNCC | 1 cut(s) | 352 |
| NmuCI | GTSAC | 1 cut(s) | 113 |
| PdmI | GAANNNNTTC | 1 cut(s) | 535 |
| PfeI | GAWTC | 3 cut(s) | 176, 370, 460 |
| PleI | GAGTC | 1 cut(s) | 200 |
| PpsI | GAGTC | 1 cut(s) | 200 |
| PshAI | GACNNNNGTC | 1 cut(s) | 111 |
| PspN4I | GGNNCC | 1 cut(s) | 352 |
| PsrI | GAACNNNNNNTAC | 2 cut(s) | 494, 526 |
| PsuI | RGATCY | 1 cut(s) | 387 |
| RsaI | GTAC | 4 cut(s) | 25, 133, 254, 352 |
| RsaNI | GTAC | 4 cut(s) | 24, 132, 253, 351 |
| RseI | CAYNNNNRTG | 2 cut(s) | 578, 595 |
| SaqAI | TTAA | 3 cut(s) | 14, 51, 482 |
| Sau3AI | GATC | 5 cut(s) | 286, 387, 399, 430, 565 |
| SchI | GAGTC | 1 cut(s) | 200 |
| SetI | ASST | 9 cut(s) | 25, 111, 133, 313, 356, 450, 473, 488, 552 |
| SmiMI | CAYNNNNRTG | 2 cut(s) | 578, 595 |
| Sse9I | AATT | 4 cut(s) | 57, 154, 374, 531 |
| SspMI | CTAG | 1 cut(s) | 366 |
| TaaI | ACNGT | 2 cut(s) | 70, 78 |
| TaqI | TCGA | 2 cut(s) | 105, 420 |
| TasI | AATT | 4 cut(s) | 57, 154, 374, 531 |
| TatI | WGTACW | 1 cut(s) | 252 |
| TfiI | GAWTC | 3 cut(s) | 176, 370, 460 |
| Tru1I | TTAA | 3 cut(s) | 14, 51, 482 |
| Tru9I | TTAA | 3 cut(s) | 14, 51, 482 |
| TscAI | CASTG | 1 cut(s) | 231 |
| TseFI | GTSAC | 1 cut(s) | 113 |
| Tsp45I | GTSAC | 1 cut(s) | 113 |
| TspDTI | ATGAA | 4 cut(s) | 33, 86, 168, 282 |
| TspGWI | ACGGA | 2 cut(s) | 69, 558 |
| TspRI | CASTG | 1 cut(s) | 231 |
| XapI | RAATTY | 2 cut(s) | 57, 531 |
| XmnI | GAANNNNTTC | 1 cut(s) | 535 |
| XspI | CTAG | 1 cut(s) | 366 |