Rorug05G0072400

LRR receptor-like serine threonine-protein kinase

Basic Information

Type: gene
Biological Identity
rosa_rugosa
GWHBQTZ00000005
Physical Location & Seq
Forward (+)
6215595 .. 6219132
3538 bp
Loading structure...
UTR
Exon/CDS
Intron
Rorug05G0072400.1

Sequence Viewer

Length: 2601 bp
ATGTCTTATTCTACAGCTAAAACAGTCCAAAGACTTGCGATCTTGTTTCCTCTGCTCATCATCTACTTGCTATTCAATCTCTCCTACGCAGTTGAAGCTGAAGATGAGAAAAAAATCACTAACATTGGAGCAATCATTGATGTTAATTCCCGTATCGGCAAAGAACAGAAAGCTGCTATGGAAATTGCAGCTGAAAACTTCAACAACCAGGCAGACACTCATGAGCTAATCCTTCATTTTCGAGATTCTGGCCGCGACCCTTTTCTTGCTGCTTATGCTGCTAAACATTTGATAAGGGAACAAAAGGTACAAGTGGTAATTGGCATGGAAACTTGGCAGGAAGCAGTTACAGTAGCTGATGTGGTCAAAAACCTATCTGATCAAATTCCGGTCATTTCCTTTGCAGCACCCACCATATCCCCGCCACTAATACAACGGCGTTGGCCTTCCTTGATACGAATGGCTACCGATGGTGCTGCTCAGATGAAATGCATTGGAGATATAGTTAATGCATACAACTGGAAAAGGGTTGTTGTAATATATGAAGATGATGGTTATGGTGGTGGTGTGGGGAGGCTAGCTCTTTTATCTGAGACTCTAAGAAATGTTGGTTCTACAATTGAGCTTCGTATAGTTCTCCCACGACTTTCTGAGCCTGATACAAATTGGGATGAAATAAAGAAGCAGCTGTTGGAGCTTTCCAATGTAAACTCTCGGGCATTTATAGTTCTTCAGTCATCTTTACCAACAGTAACTGGTCTATTCAAAGTGGCTAGGAAGATGGGATTTGTAGGAAATGATTCAGCTTGGATAATCACAGAGAGTATTGCTAGTTTGCTTGACCCTCATGGCAACTACGATATGGAAGGAACTCTGGGAATCAAGACCTACTACGCCAATGAGTCTAGTTCTTATGCTGAATTCCAGAAGGAATTCCAAGCTAAGTATGCAGAAGAAAATAACTCCAAGCCAGGAATTTATGCTCTTCGAGCATATGATACTATTAATGCCATTTCACAGGCCATAGAAGGAATCCCTAATAACACCACTAGTACTAGCCTTCAGGGTATGATAACTATATCGTTGAGCAATTACAACGGTTTAAGTGGGAAAATGCAACTAAAAGGAGGTGAGGTACCGCTGGATTCTCCGAGATTCAGGATCATAAATATTGTGGGTGGGAATACAGATAACGAATTAAACTTTTGGACACCAGGGTTTGGATTTTCAGAAGACACATACAGAAGAAGTGATGATGTTGGCAATGTAACTTGGCCCGGGAAGCTAAGACTACCTGCCTCCAAAGGCTGGGCAATGCCCACTGATGAGAAGCCAATGAAAATTTTGCTCCCAACTTACCACACAAACTTTGTAAGGCGTATCTCCGGGGAGAACTCAAATGAGATGGGAAAAGAGGGTTTATGCCGAGGAAAGAAGCCCGGGGAGAACTCAAACGGTTTATGCTCATATCTTCCTTTCTATGAGGGTTTGAGTATTGATCTTTTCTGTTGCGTGCTAGATAATTTGGCTTATCGCTTGCCACATGAAGTACATGAATTTAACGACAACAATGGCACTTACAATGATATGATAGAACTAGTGTATAACAAGACTTATGATGCTGTGATTGGCGATATGACTGTACTTGCATCGCGAATTGACAAAGTGGATTTCACTCAACCATATCTGGAGTCTGGTTTGTCATTGATAGTACCAGATGAATCTAATGAGTCAACATGGCTGTTTATGAAACCTTTCACATGGCAGATGTGGGTGGCTAGTTGTGCCATCTTAATCTACACTATGTTAATAATATGGTTCCTGGAGGGTCCTTCCAGTCCAGAATTTGATGGTCCATTGATGAATCAGATCGCCACAGCAACTTGGTTCTCCTTCTCATCTCTGTTCTTTGCTCACAGAGAGAAAATCTATAGCAATTTGACACGAGTAGTTTTCATAGTGTGGCTGTTTGTTGTATTCATCCTAAACTCAAGCTACACTGCTAATCTGTCTTCGATGCTTACAATTCAACGACTGAGCCCGAATGTAACAGACATTGAAATGTTAAGGACAACCAACTCATTAGTTGGTTGTGATAACGATTCATTTGTAAGGGATTACCTGGAGAATGTTCTTCAATTAAAAAACATCGAGACAGTAGAGAGCAACTTAACACCCAATACCTTCAGCAACAACACGAGATTATCTGCTGTATTTCTTGAACTCCCATATGCAGAAGTTTTCATGAACAATTACACTGAGGGATTTAGCAACACCAAAGCCACCTACAGTTTTGGAGGCTTTAGCTTTGCATTTCAGAAAGGTTCTCCAATAGCGAGGAATTTCTCTAAGGTCATCCTAGATCTATTGGAGAATGGAACAATGAGAGAACTTCAAGATCACTGGTTGAATCCGAGCAAATGTCCAACCAATACAACTTCCGATATGCCAGAAAGCTTGACCATCGAGAGCTTTTGGGGCATCTTTGTAATATCCGGTGCGACTTCCACCCTCTGTCTTCTATCTTCTGCCATCTTGAAAAAGTTTGGACACCAAGAAGCATCCGGAACACGCCCTGAAGATTCCGTACAAGTGCTCTAA

Protein Analysis

866

Amino Acids

96.96

Weight (kDa)

5.07

Isoelectric Point (pI)

35.03

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
Peripla_BP_6 PF13458 51 - 373 6.6e-19 Periplasmic binding protein
ANF_receptor PF01094 57 - 392 1.4e-40 Receptor family ligand binding region
Lig_chan-Glu_bd PF10613 494 - 572 6.6e-08 Ligated ion channel L-glutamate- and glycine-binding site
SBP_bac_3 PF00497 495 - 804 1.3e-12 Bacterial extracellular solute-binding proteins, family 3
Lig_chan PF00060 587 - 834 1e-28 Ligand-gated ion channel
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready

Orthologous Genes (Group: OG0000048)

Species Orthologous Gene IDs
arabidopsis_thaliana AT2G34930
fragaria_vesca FvH4_3g12670 FvH4_3g12672 FvH4_3g12740 FvH4_3g12742 FvH4_3g12770 FvH4_3g12770 FvH4_3g12860 FvH4_3g12890 FvH4_3g13431 FvH4_3g13433 FvH4_3g13435 FvH4_3g13470 FvH4_3g13470 FvH4_3g13480 FvH4_3g13562 FvH4_3g13580 FvH4_3g13600 FvH4_3g13600 FvH4_3g13600 FvH4_3g13600 FvH4_3g13600 FvH4_3g13600 FvH4_3g13610 FvH4_3g13620 FvH4_3g13620 FvH4_3g23240 FvH4_3g32910 FvH4_3g35070 FvH4_3g45520 FvH4_5g08430 FvH4_5g08450 FvH4_6g53230 FvH4_6g53300
malus_domestica MD05G1217600.v1.1 MD05G1217700.v1.1 MD05G1224700.v1.1 MD05G1225100.v1.1 MD05G1225300.v1.1 MD05G1225400.v1.1 MD05G1235900.v1.1 MD05G1236100.v1.1 MD05G1236300.v1.1 MD05G1237200.v1.1 MD05G1241600.v1.1 MD05G1245700.v1.1 MD05G1245800.v1.1 MD05G1245900.v1.1 MD05G1246000.v1.1 MD05G1246100.v1.1 MD05G1246300.v1.1 MD05G1246400.v1.1 MD05G1246500.v1.1 MD05G1248100.v1.1 MD05G1248200.v1.1 MD05G1264300.v1.1 MD05G1275900.v1.1 MD07G1051400.v1.1 MD09G1012600.v1.1 MD09G1012700.v1.1 MD09G1012800.v1.1 MD10G1221400.v1.1 MD10G1221500.v1.1 MD10G1221600.v1.1 MD10G1221900.v1.1 MD10G1222200.v1.1 MD10G1222400.v1.1 MD10G1222500.v1.1 MD10G1222900.v1.1 MD10G1223000.v1.1 MD10G1223100.v1.1 MD10G1223500.v1.1 MD10G1228000.v1.1 MD12G1019600.v1.1 MD12G1020000.v1.1 MD12G1020100.v1.1 MD17G1013200.v1.1 MD17G1013300.v1.1 MD17G1013400.v1.1
prunus_persica Prupe.1G060500_v2.0.a1 Prupe.1G100100_v2.0.a1 Prupe.3G124000_v2.0.a1 Prupe.3G304400_v2.0.a1 Prupe.4G116800_v2.0.a1 Prupe.4G116900_v2.0.a1 Prupe.4G117000_v2.0.a1 Prupe.4G121800_v2.0.a1 Prupe.4G121900_v2.0.a1 Prupe.4G122000_v2.0.a1 Prupe.4G122100_v2.0.a1 Prupe.4G122200_v2.0.a1 Prupe.4G122300_v2.0.a1 Prupe.4G122500_v2.0.a1 Prupe.4G122600_v2.0.a1 Prupe.4G122800_v2.0.a1 Prupe.4G122900_v2.0.a1 Prupe.4G123000_v2.0.a1 Prupe.4G123100_v2.0.a1 Prupe.4G123200_v2.0.a1 Prupe.4G131500_v2.0.a1 Prupe.4G131600_v2.0.a1 Prupe.7G032500_v2.0.a1 Prupe.7G032900_v2.0.a1 Prupe.7G033000_v2.0.a1 Prupe.7G033100_v2.0.a1 Prupe.7G033300_v2.0.a1 Prupe.7G033600_v2.0.a1 Prupe.7G034600_v2.0.a1 Prupe.7G040200_v2.0.a1 Prupe.7G059200_v2.0.a1
pyrus_communis pycom05g20580 pycom05g20590 pycom05g20760 pycom05g20800 pycom05g21280 pycom05g21290 pycom05g21820 pycom05g21830 pycom05g22180 pycom05g22190 pycom05g22210 pycom05g22450 pycom05g22460 pycom05g22470 pycom05g22480 pycom05g22490 pycom05g23770 pycom05g23780 pycom05g24050 pycom05g24060 pycom07g03910 pycom10g18700 pycom10g18720 pycom10g18730 pycom10g18740 pycom10g19150 pycom111g01060 pycom12g01660 pycom12g01690 pycom12g01720 pycom12g01740 pycom12g01750 pycom12g01770 pycom12g01810 pycom12g01820 pycom12g01830 pycom12g01840 pycom12g01870 pycom12g01900 pycom17g01060 pycom17g01070
rosa_chinensis RchiOBHm_Chr1g0315041 RchiOBHm_Chr1g0315051 RchiOBHm_Chr1g0315071 RchiOBHm_Chr1g0315161 RchiOBHm_Chr1g0315211 RchiOBHm_Chr1g0315251 RchiOBHm_Chr1g0315321 RchiOBHm_Chr1g0315391 RchiOBHm_Chr1g0315451 RchiOBHm_Chr1g0315481 RchiOBHm_Chr1g0315551 RchiOBHm_Chr1g0315601 RchiOBHm_Chr1g0315621 RchiOBHm_Chr1g0359221 RchiOBHm_Chr2g0142981 RchiOBHm_Chr2g0143001 RchiOBHm_Chr2g0143061 RchiOBHm_Chr2g0143091 RchiOBHm_Chr2g0175321 RchiOBHm_Chr2g0175341 RchiOBHm_Chr2g0175361 RchiOBHm_Chr2g0175371 RchiOBHm_Chr3g0470491 RchiOBHm_Chr3g0480881 RchiOBHm_Chr3g0485511 RchiOBHm_Chr5g0020741 RchiOBHm_Chr5g0020901 RchiOBHm_Chr5g0020931 RchiOBHm_Chr5g0020941 RchiOBHm_Chr5g0020961 RchiOBHm_Chr5g0020971 RchiOBHm_Chr5g0021451 RchiOBHm_Chr5g0021531 RchiOBHm_Chr5g0021831 RchiOBHm_Chr5g0021841 RchiOBHm_Chr5g0021931 RchiOBHm_Chr5g0021941 RchiOBHm_Chr5g0021981 RchiOBHm_Chr5g0021991 RchiOBHm_Chr5g0022011 RchiOBHm_Chr5g0022181 RchiOBHm_Chr5g0022191 RchiOBHm_Chr5g0022211 RchiOBHm_Chr5g0022221 RchiOBHm_Chr5g0022231 RchiOBHm_Chr5g0022291 RchiOBHm_Chr5g0022301 RchiOBHm_Chr5g0022331 RchiOBHm_Chr5g0022361 RchiOBHm_Chr5g0022371 RchiOBHm_Chr5g0022381 RchiOBHm_Chr5g0022401 RchiOBHm_Chr5g0022431 RchiOBHm_Chr5g0022451 RchiOBHm_Chr5g0022541 RchiOBHm_Chr5g0022591 RchiOBHm_Chr5g0022601 RchiOBHm_Chr5g0022701 RchiOBHm_Chr5g0022741 RchiOBHm_Chr5g0022791 RchiOBHm_Chr5g0022811 RchiOBHm_Chr5g0022851 RchiOBHm_Chr5g0029441 RchiOBHm_Chr5g0041631 RchiOBHm_Chr5g0069391 RchiOBHm_Chr6g0273811 RchiOBHm_Chr6g0273831 RchiOBHm_Chr6g0275331 RchiOBHm_Chr7g0219061
rosa_laevigata RLG00000002463 RLG00000020007 RLG00000020008 RLG00000022320 RLG00000022321 RLG00000023446 RLG00000030742 RLG00000030743 RLG00000030747 RLG00000032557 RLG00000032564 RLG00000032571 RLG00000032573 RLG00000032574 RLG00000032612 RLG00000032633 RLG00000032636 RLG00000032638 RLG00000032650 RLG00000032651 RLG00000032652 RLG00000032653 RLG00000032655 RLG00000032673 RLG00000032678 RLG00000032769 RLG00000032857 RLG00000033168 RLG00000033465 RLG00000034086 RLG00000034222 RLG00000035290
rosa_multiflora Rmu_co8143358.1_g000001 Rmu_co8518791.1_g000001 Rmu_sc0000178.1_g000008 Rmu_sc0000178.1_g000014 Rmu_sc0000401.1_g000005 Rmu_sc0000401.1_g000013 Rmu_sc0000401.1_g000017 Rmu_sc0000401.1_g000018 Rmu_sc0000401.1_g000024 Rmu_sc0000401.1_g000025 Rmu_sc0000576.1_g000020 Rmu_sc0001585.1_g000003 Rmu_sc0001585.1_g000005 Rmu_sc0001585.1_g000008 Rmu_sc0001784.1_g000006 Rmu_sc0001784.1_g000011 Rmu_sc0001784.1_g000022 Rmu_sc0001784.1_g000028 Rmu_sc0002052.1_g000004 Rmu_sc0002052.1_g000011 Rmu_sc0002277.1_g000003 Rmu_sc0002277.1_g000006 Rmu_sc0002277.1_g000024 Rmu_sc0002658.1_g000012 Rmu_sc0003512.1_g000004 Rmu_sc0003512.1_g000007 Rmu_sc0004180.1_g000016 Rmu_sc0004180.1_g000029 Rmu_sc0004180.1_g000034 Rmu_sc0005639.1_g000008 Rmu_sc0005639.1_g000023 Rmu_sc0006070.1_g000016 Rmu_sc0006070.1_g000017 Rmu_sc0006966.1_g000021 Rmu_sc0006966.1_g000023 Rmu_sc0007239.1_g000003 Rmu_sc0008460.1_g000010 Rmu_sc0009984.1_g000008 Rmu_sc0010181.1_g000005 Rmu_sc0010181.1_g000010 Rmu_sc0010503.1_g000006 Rmu_sc0011646.1_g000003 Rmu_sc0012984.1_g000011 Rmu_sc0016972.1_g000005 Rmu_sc0016972.1_g000008 Rmu_sc0023070.1_g000003 Rmu_sc0025660.1_g000001 Rmu_ssc0000322.1_g000019
rosa_roxburghii Rroxscaffold_1G00038860 Rroxscaffold_1G00053490 Rroxscaffold_1G00053500 Rroxscaffold_1G00054230 Rroxscaffold_1G00056460 Rroxscaffold_1G00056470 Rroxscaffold_1G00056480 Rroxscaffold_1G00056500 Rroxscaffold_1G00056510 Rroxscaffold_1G00056620 Rroxscaffold_1G00056690 Rroxscaffold_1G00056710 Rroxscaffold_1G00056720 Rroxscaffold_1G00056730 Rroxscaffold_1G00056740 Rroxscaffold_1G00056750 Rroxscaffold_1G00056760 Rroxscaffold_1G00056870 Rroxscaffold_1G00056900 Rroxscaffold_1G00057120 Rroxscaffold_1G00057560 Rroxscaffold_2G00077430 Rroxscaffold_2G00102160 Rroxscaffold_3G00231420 Rroxscaffold_3G00231430 Rroxscaffold_4G00297230 Rroxscaffold_4G00331570 Rroxscaffold_6G00396700 Rroxscaffold_6G00400940 Rroxscaffold_7G00192740
rosa_rugosa Rorug01G0004400 Rorug01G0004500 Rorug02G0377600 Rorug02G0378000 Rorug02G0582800 Rorug02G0583400 Rorug03G0187000 Rorug03G0218800 Rorug04G0081200 Rorug05G0062700 Rorug05G0062700 Rorug05G0063100 Rorug05G0063200 Rorug05G0063200 Rorug05G0063200 Rorug05G0067000 Rorug05G0069700 Rorug05G0069900 Rorug05G0070000 Rorug05G0070100 Rorug05G0070300 Rorug05G0070400 Rorug05G0070600 Rorug05G0070600 Rorug05G0072300 Rorug05G0072400 Rorug05G0072500 Rorug05G0072500 Rorug05G0072600.1 Rorug05G0072700 Rorug05G0072800 Rorug05G0072800 Rorug05G0072900 Rorug05G0073000 Rorug05G0073000 Rorug05G0073400 Rorug05G0073400 Rorug05G0073400 Rorug05G0074800 Rorug05G0075000 Rorug05G0114300 Rorug05G0194200 Rorug06G0097800
rosa_samantha Rh2AG401400 Rh2CG387600 Rh2CG417000 Rh2CG637400 Rh5CG169600 Rh5CG172100 Rh5CG175200 Rh5CG317100 Rh6DG187900
rosa_wichuraiana Rw1G000750 Rw1G000790 Rw1G000820 Rw1G000860 Rw1G000880 Rw1G000910 Rw2G035180 Rw2G035200 Rw2G035240 Rw2G054370 Rw2G054380 Rw5G013570 Rw5G013580 Rw5G013590 Rw5G013910 Rw5G013980 Rw5G014110 Rw5G014120 Rw5G014280 Rw5G014310 Rw5G014400 Rw5G014420 Rw5G014440 Rw5G014460 Rw5G014480 Rw5G014500 Rw5G014520 Rw5G014530 Rw5G042390

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
Acc36I ACCTGC 1 cut(s) 1303
Acc65I GGTACC 1 cut(s) 1135
AccB1I GGYRCC 1 cut(s) 1135
AccB7I CCANNNNNTGG 2 cut(s) 1220, 1308
AccII CGCG 2 cut(s) 255, 1654
AccIII TCCGGA 1 cut(s) 2564
AciI CCGC 3 cut(s) 253, 422, 1139
AclWI GGATC 1 cut(s) 1169
AcoI YGGCCR 1 cut(s) 250
AcsI RAATTY 8 cut(s) 384, 920, 932, 975, 1341, 1556, 1844, 2341
AcuI CTGAAG 5 cut(s) 120, 716, 1046, 2170, 2598
AfaI GTAC 7 cut(s) 309, 1054, 1137, 1551, 1644, 1713, 2589
AfiI CCNNNNNNNGG 2 cut(s) 1220, 1308
AhlI ACTAGT 2 cut(s) 1049, 1597
AjnI CCWGG 5 cut(s) 207, 970, 1213, 1821, 2121
AjuI GAANNNNNNNTTGG 2 cut(s) 674, 706
Alw21I GWGCWC 1 cut(s) 2598
Alw26I GTCTC 2 cut(s) 587, 2147
AlwI GGATC 1 cut(s) 1169
AlwNI CAGNNNCTG 2 cut(s) 356, 755
Ama87I CYCGRG 3 cut(s) 714, 1277, 1439
Aor13HI TCCGGA 1 cut(s) 2564
AoxI GGCC 4 cut(s) 250, 443, 1020, 1274
ApeKI GCWGC 7 cut(s) 173, 188, 269, 278, 404, 476, 685
ApoI RAATTY 8 cut(s) 384, 920, 932, 975, 1341, 1556, 1844, 2341
AseI ATTAAT 1 cut(s) 1005
Asp700I GAANNNNTTC 3 cut(s) 799, 932, 1754
Asp718I GGTACC 1 cut(s) 1135
AspS9I GGNCC 3 cut(s) 1275, 1829, 1853
AsuC2I CCSGG 5 cut(s) 1278, 1279, 1387, 1440, 1441
AsuHPI GGTGA 1 cut(s) 1142
AsuNHI GCTAGC 1 cut(s) 577
AvaI CYCGRG 3 cut(s) 714, 1277, 1439
AvaII GGWCC 2 cut(s) 1829, 1853
BanI GGYRCC 1 cut(s) 1135
BanII GRGCYC 1 cut(s) 2042
BarI GAAGNNNNNNTAC 1 cut(s) 2571
BauI CACGAG 2 cut(s) 1944, 2197
BbsI GAAGAC 3 cut(s) 1239, 2004, 2510
Bbv12I GWGCWC 1 cut(s) 2598
BbvI GCAGC 7 cut(s) 160, 200, 256, 265, 416, 463, 697
BccI CCATC 8 cut(s) 464, 545, 775, 1399, 1796, 1844, 2471, 2540
BceAI ACGGC 1 cut(s) 452
BcgI CGANNNNNNTGC 2 cut(s) 458, 492
BciT130I CCWGG 5 cut(s) 209, 972, 1215, 1823, 2123
BclI TGATCA 1 cut(s) 379
BcnI CCSGG 5 cut(s) 1278, 1279, 1387, 1440, 1441
BcoDI GTCTC 2 cut(s) 587, 2147
BcuI ACTAGT 2 cut(s) 1049, 1597
BfmI CTRYAG 3 cut(s) 12, 1930, 2287
BfuAI ACCTGC 1 cut(s) 1303
BglII AGATCT 1 cut(s) 2362
BisI GCNGC 8 cut(s) 174, 189, 253, 270, 279, 405, 477, 686
BlsI GCNGC 8 cut(s) 175, 190, 254, 271, 280, 406, 478, 687
BmcAI AGTACT 1 cut(s) 1054
Bme18I GGWCC 2 cut(s) 1829, 1853
BmeT110I CYCGRG 3 cut(s) 714, 1277, 1439
BmgT120I GGNCC 3 cut(s) 1275, 1829, 1853
BmiI GGNNCC 3 cut(s) 1137, 1820, 1830
BmsI GCATC 5 cut(s) 1609, 1658, 2007, 2490, 2570
BmtI GCTAGC 1 cut(s) 581
BpiI GAAGAC 3 cut(s) 1239, 2004, 2510
BplI GAGNNNNNCTC 2 cut(s) 565, 597
BpmI CTGGAG 3 cut(s) 1709, 1844, 2144
BpuEI CTTGAG 1 cut(s) 1975
BpuMI CCSGG 5 cut(s) 1278, 1279, 1387, 1440, 1441
BsaJI CCNNGG 6 cut(s) 1214, 1277, 1386, 1426, 1439, 1440
BsaWI WCCGGW 3 cut(s) 388, 2495, 2564
BsaXI ACNNNNNCTCC 4 cut(s) 489, 519, 1119, 1149
Bsc4I CCNNNNNNNGG 2 cut(s) 1220, 1308
Bse1I ACTGG 4 cut(s) 524, 760, 1836, 2408
Bse3DI GCAATG 2 cut(s) 1270, 1320
BseAI TCCGGA 1 cut(s) 2564
BseBI CCWGG 5 cut(s) 209, 972, 1215, 1823, 2123
BseDI CCNNGG 6 cut(s) 1214, 1277, 1386, 1426, 1439, 1440
BseGI GGATG 4 cut(s) 676, 1980, 2355, 2561
BseLI CCNNNNNNNGG 2 cut(s) 1220, 1308
BseMI GCAATG 2 cut(s) 1270, 1320
BseMII CTCAG 5 cut(s) 494, 582, 642, 2027, 2250
BseNI ACTGG 4 cut(s) 524, 760, 1836, 2408
BseXI GCAGC 7 cut(s) 160, 200, 256, 265, 416, 463, 697
BseYI CCCAGC 1 cut(s) 1308
Bsh1236I CGCG 2 cut(s) 255, 1654
BshFI GGCC 4 cut(s) 252, 445, 1022, 1276
BshNI GGYRCC 1 cut(s) 1135
BsiHKAI GWGCWC 1 cut(s) 2598
BsiHKCI CYCGRG 3 cut(s) 714, 1277, 1439
BsiSI CCGG 6 cut(s) 389, 1278, 1386, 1440, 2496, 2565
BslI CCNNNNNNNGG 2 cut(s) 1220, 1308
BsmAI GTCTC 2 cut(s) 587, 2147
BsnI GGCC 4 cut(s) 252, 445, 1022, 1276
BsoBI CYCGRG 3 cut(s) 714, 1277, 1439
Bsp1286I GDGCHC 2 cut(s) 2042, 2598
Bsp13I TCCGGA 1 cut(s) 2564
Bsp143I GATC 7 cut(s) 39, 379, 1161, 1498, 1869, 2362, 2398
Bsp68I TCGCGA 1 cut(s) 1654
BspACI CCGC 3 cut(s) 253, 422, 1139
BspANI GGCC 4 cut(s) 252, 445, 1022, 1276
BspCNI CTCAG 5 cut(s) 493, 583, 643, 2028, 2251
BspEI TCCGGA 1 cut(s) 2564
BspFNI CGCG 2 cut(s) 255, 1654
BspHI TCATGA 2 cut(s) 220, 2244
BspLI GGNNCC 3 cut(s) 1137, 1820, 1830
BspMI ACCTGC 1 cut(s) 1303
BspOI GCTAGC 1 cut(s) 581
BspPI GGATC 1 cut(s) 1169
BspQI GCTCTTC 1 cut(s) 990
BspT107I GGYRCC 1 cut(s) 1135
BsrDI GCAATG 2 cut(s) 1270, 1320
BsrI ACTGG 4 cut(s) 524, 760, 1836, 2408
BssECI CCNNGG 6 cut(s) 1214, 1277, 1386, 1426, 1439, 1440
BssMI GATC 7 cut(s) 39, 379, 1161, 1498, 1869, 2362, 2398
BssSI CACGAG 2 cut(s) 1944, 2197
Bst2BI CACGAG 2 cut(s) 1944, 2197
Bst2UI CCWGG 5 cut(s) 209, 972, 1215, 1823, 2123
Bst4CI ACNGT 8 cut(s) 25, 352, 751, 1100, 1457, 1642, 2158, 2291
Bst6I CTCTTC 1 cut(s) 990
BstC8I GCNNGC 3 cut(s) 579, 1514, 1538
BstDEI CTNAG 9 cut(s) 480, 591, 599, 651, 942, 1286, 2036, 2259, 2349
BstF5I GGATG 4 cut(s) 676, 1980, 2355, 2561
BstFNI CGCG 2 cut(s) 255, 1654
BstKTI GATC 7 cut(s) 42, 382, 1164, 1501, 1872, 2365, 2401
BstMAI GTCTC 2 cut(s) 587, 2147
BstMBI GATC 7 cut(s) 39, 379, 1161, 1498, 1869, 2362, 2398
BstMWI GCNNNNNNNGC 9 cut(s) 95, 275, 278, 694, 947, 989, 1282, 1784, 2478
BstNI CCWGG 5 cut(s) 209, 972, 1215, 1823, 2123
BstSFI CTRYAG 3 cut(s) 12, 1930, 2287
BstUI CGCG 2 cut(s) 255, 1654
BstV1I GCAGC 7 cut(s) 160, 200, 256, 265, 416, 463, 697
BstV2I GAAGAC 3 cut(s) 1239, 2004, 2510
BstX2I RGATCY 1 cut(s) 2362
BstYI RGATCY 1 cut(s) 2362
BsuRI GGCC 4 cut(s) 252, 445, 1022, 1276
BtgZI GCGATG 1 cut(s) 1635
BtsCI GGATG 4 cut(s) 676, 1980, 2355, 2561
BtsI GCAGTG 1 cut(s) 1998
BtsIMutI CAGTG 4 cut(s) 1320, 1998, 2256, 2401
BtuMI TCGCGA 1 cut(s) 1654
BveI ACCTGC 1 cut(s) 1303
Cac8I GCNNGC 3 cut(s) 579, 1514, 1538
CaiI CAGNNNCTG 2 cut(s) 356, 755
CciI TCATGA 2 cut(s) 220, 2244
Cfr13I GGNCC 3 cut(s) 1275, 1829, 1853
Cfr9I CCCGGG 2 cut(s) 1277, 1439
Csp6I GTAC 7 cut(s) 308, 1053, 1136, 1550, 1643, 1712, 2588
CviAII CATG 8 cut(s) 221, 325, 848, 1544, 1553, 1737, 1761, 2245
CviQI GTAC 7 cut(s) 308, 1053, 1136, 1550, 1643, 1712, 2588
DdeI CTNAG 9 cut(s) 480, 591, 599, 651, 942, 1286, 2036, 2259, 2349
DpnI GATC 7 cut(s) 41, 381, 1163, 1500, 1871, 2364, 2400
DpnII GATC 7 cut(s) 39, 379, 1161, 1498, 1869, 2362, 2398
EaeI YGGCCR 1 cut(s) 250
Eam1104I CTCTTC 1 cut(s) 990
EarI CTCTTC 1 cut(s) 990
Eco24I GRGCYC 1 cut(s) 2042
Eco47I GGWCC 2 cut(s) 1829, 1853
Eco57I CTGAAG 5 cut(s) 120, 716, 1046, 2170, 2598
Eco88I CYCGRG 3 cut(s) 714, 1277, 1439
EcoO109I RGGNCCY 1 cut(s) 1829
EcoRI GAATTC 2 cut(s) 920, 932
EcoRII CCWGG 5 cut(s) 207, 970, 1213, 1821, 2121
EcoT22I ATGCAT 2 cut(s) 494, 514
EcoT38I GRGCYC 1 cut(s) 2042
FaeI CATG 8 cut(s) 224, 328, 851, 1547, 1556, 1740, 1764, 2248
FatI CATG 8 cut(s) 220, 324, 847, 1543, 1552, 1736, 1760, 2244
FauI CCCGC 1 cut(s) 429
FauNDI CATATG 2 cut(s) 994, 2230
FbaI TGATCA 1 cut(s) 379
Fnu4HI GCNGC 8 cut(s) 174, 189, 253, 270, 279, 405, 477, 686
FokI GGATG 4 cut(s) 683, 1967, 2342, 2548
FriOI GRGCYC 1 cut(s) 2042
Fsp4HI GCNGC 8 cut(s) 174, 189, 253, 270, 279, 405, 477, 686
GluI GCNGC 8 cut(s) 174, 189, 253, 270, 279, 405, 477, 686
GsaI CCCAGC 1 cut(s) 1312
GsuI CTGGAG 3 cut(s) 1709, 1844, 2144
HaeIII GGCC 4 cut(s) 252, 445, 1022, 1276
HapII CCGG 6 cut(s) 389, 1278, 1386, 1440, 2496, 2565
Hin1II CATG 8 cut(s) 224, 328, 851, 1547, 1556, 1740, 1764, 2248
HincII GTYRAC 1 cut(s) 1734
HindII GTYRAC 1 cut(s) 1734
HindIII AAGCTT 1 cut(s) 2455
HpaII CCGG 6 cut(s) 389, 1278, 1386, 1440, 2496, 2565
HphI GGTGA 1 cut(s) 1142
Hpy166II GTNNAC 2 cut(s) 709, 1734
Hpy8I GTNNAC 2 cut(s) 709, 1734
HpyAV CCTTC 9 cut(s) 242, 456, 860, 922, 1022, 1070, 1842, 1903, 2194
HpyCH4III ACNGT 8 cut(s) 25, 352, 751, 1100, 1457, 1642, 2158, 2291
HpyCH4V TGCA 9 cut(s) 188, 404, 492, 512, 950, 1117, 1649, 2234, 2312
HpyF10VI GCNNNNNNNGC 9 cut(s) 95, 275, 278, 694, 947, 989, 1282, 1784, 2478
HpyF3I CTNAG 9 cut(s) 480, 591, 599, 651, 942, 1286, 2036, 2259, 2349
Hsp92II CATG 8 cut(s) 224, 328, 851, 1547, 1556, 1740, 1764, 2248
Kpn2I TCCGGA 1 cut(s) 2564
KpnI GGTACC 1 cut(s) 1139
Ksp22I TGATCA 1 cut(s) 379
Kzo9I GATC 7 cut(s) 39, 379, 1161, 1498, 1869, 2362, 2398
LguI GCTCTTC 1 cut(s) 990
LmnI GCTCC 3 cut(s) 128, 694, 1353
Lsp1109I GCAGC 7 cut(s) 160, 200, 256, 265, 416, 463, 697
LweI GCATC 5 cut(s) 1609, 1658, 2007, 2490, 2570
MaeIII GTNAC 4 cut(s) 346, 751, 1267, 2047
MalI GATC 7 cut(s) 41, 381, 1163, 1500, 1871, 2364, 2400
MboI GATC 7 cut(s) 39, 379, 1161, 1498, 1869, 2362, 2398
MfeI CAATTG 1 cut(s) 618
MflI RGATCY 1 cut(s) 2362
MhlI GDGCHC 2 cut(s) 2042, 2598
MlyI GAGTC 4 cut(s) 589, 911, 1700, 1739
MmeI TCCRAC 2 cut(s) 672, 2450
Mph1103I ATGCAT 2 cut(s) 494, 514
MroI TCCGGA 1 cut(s) 2564
MroXI GAANNNNTTC 3 cut(s) 799, 932, 1754
MslI CAYNNNNRTG 1 cut(s) 2060
MspA1I CMGCKG 3 cut(s) 191, 688, 1141
MspI CCGG 6 cut(s) 389, 1278, 1386, 1440, 2496, 2565
MunI CAATTG 1 cut(s) 618
MvaI CCWGG 5 cut(s) 209, 972, 1215, 1823, 2123
MvnI CGCG 2 cut(s) 255, 1654
MwoI GCNNNNNNNGC 9 cut(s) 95, 275, 278, 694, 947, 989, 1282, 1784, 2478
NciI CCSGG 5 cut(s) 1278, 1279, 1387, 1440, 1441
NdeI CATATG 2 cut(s) 994, 2230
NdeII GATC 7 cut(s) 39, 379, 1161, 1498, 1869, 2362, 2398
NheI GCTAGC 1 cut(s) 577
NlaIII CATG 8 cut(s) 224, 328, 851, 1547, 1556, 1740, 1764, 2248
NlaIV GGNNCC 3 cut(s) 1137, 1820, 1830
NmeAIII GCCGAG 1 cut(s) 1451
NruI TCGCGA 1 cut(s) 1654
NsiI ATGCAT 2 cut(s) 494, 514
PagI TCATGA 2 cut(s) 220, 2244
PciSI GCTCTTC 1 cut(s) 990
PdmI GAANNNNTTC 3 cut(s) 799, 932, 1754
PflMI CCANNNNNTGG 2 cut(s) 1220, 1308
PfoI TCCNGGA 1 cut(s) 1821
PkrI GCNGC 8 cut(s) 175, 190, 254, 271, 280, 406, 478, 687
PleI GAGTC 4 cut(s) 589, 910, 1699, 1738
PpsI GAGTC 4 cut(s) 589, 910, 1699, 1738
PpuMI RGGWCCY 1 cut(s) 1829
PshBI ATTAAT 1 cut(s) 1005
Psp5II RGGWCCY 1 cut(s) 1829
Psp6I CCWGG 5 cut(s) 207, 970, 1213, 1821, 2121
PspFI CCCAGC 1 cut(s) 1308
PspGI CCWGG 5 cut(s) 207, 970, 1213, 1821, 2121
PspN4I GGNNCC 3 cut(s) 1137, 1820, 1830
PspPI GGNCC 3 cut(s) 1275, 1829, 1853
PspPPI RGGWCCY 1 cut(s) 1829
PsrI GAACNNNNNNTAC 2 cut(s) 291, 323
PstNI CAGNNNCTG 2 cut(s) 356, 755
PsuI RGATCY 1 cut(s) 2362
PvuII CAGCTG 2 cut(s) 191, 688
RruI TCGCGA 1 cut(s) 1654
RsaI GTAC 7 cut(s) 309, 1054, 1137, 1551, 1644, 1713, 2589
RsaNI GTAC 7 cut(s) 308, 1053, 1136, 1550, 1643, 1712, 2588
RseI CAYNNNNRTG 1 cut(s) 2060
SapI GCTCTTC 1 cut(s) 990
SatI GCNGC 8 cut(s) 174, 189, 253, 270, 279, 405, 477, 686
Sau3AI GATC 7 cut(s) 39, 379, 1161, 1498, 1869, 2362, 2398
Sau96I GGNCC 3 cut(s) 1275, 1829, 1853
ScaI AGTACT 1 cut(s) 1054
SchI GAGTC 4 cut(s) 589, 911, 1700, 1739
SduI GDGCHC 2 cut(s) 2042, 2598
SfaNI GCATC 5 cut(s) 1609, 1658, 2007, 2490, 2570
SfcI CTRYAG 3 cut(s) 12, 1930, 2287
SinI GGWCC 2 cut(s) 1829, 1853
SmaI CCCGGG 2 cut(s) 1279, 1441
SmiMI CAYNNNNRTG 1 cut(s) 2060
SmlI CTYRAG 1 cut(s) 1990
SmoI CTYRAG 1 cut(s) 1990
SpeI ACTAGT 2 cut(s) 1049, 1597
SsiI CCGC 3 cut(s) 253, 422, 1139
SspI AATATT 1 cut(s) 1171
TaaI ACNGT 8 cut(s) 25, 352, 751, 1100, 1457, 1642, 2158, 2291
TaqI TCGA 5 cut(s) 241, 988, 2015, 2151, 2466
TatI WGTACW 3 cut(s) 1052, 1549, 1642
TauI GCSGC 1 cut(s) 255
TscAI CASTG 4 cut(s) 1327, 2005, 2263, 2408
TseI GCWGC 7 cut(s) 173, 188, 269, 278, 404, 476, 685
TspGWI ACGGA 1 cut(s) 2575
TspMI CCCGGG 2 cut(s) 1277, 1439
TspRI CASTG 4 cut(s) 1327, 2005, 2263, 2408
Van91I CCANNNNNTGG 2 cut(s) 1220, 1308
VpaK11BI GGWCC 2 cut(s) 1829, 1853
VspI ATTAAT 1 cut(s) 1005
XapI RAATTY 8 cut(s) 384, 920, 932, 975, 1341, 1556, 1844, 2341
XmaI CCCGGG 2 cut(s) 1277, 1439
XmnI GAANNNNTTC 3 cut(s) 799, 932, 1754
ZrmI AGTACT 1 cut(s) 1054
Zsp2I ATGCAT 2 cut(s) 494, 514
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.