MD05G1236100.v1.1

regulation of response to stimulus

Basic Information

Type: gene
Biological Identity
malus_domestica
Chr05
Physical Location & Seq
Reverse (-)
36755297 .. 36762477
7181 bp
Loading structure...
UTR
Exon/CDS
Intron
MD05G1236100.v1.1.491

Sequence Viewer

Length: 3006 bp
ATGGATACCCACTATCACCCCAGTATTGCTCACTATTTCCTTCTTTTTCTTTTGACCTCTTCCTACATGCAGAGTACTACTAAACTCTGTTTCTGTTTGGCCGGTGGTGCACTTTCAAGCAGTGTGAAAACAAATCCATGCATCGACGAAGAAAGACAAGCGCTTCTCATCTTTAAACGACATCTTGTTGATGCTTCTGGTAGGCTTTCCTCTTGGGTGGGTCACGATTGCTGTCAATGGAAAGGTGTTTCGTGCAACAACCGCACCGGTCATGTGGTGAAGATGGACCTCCGGAATCCGTATGAAGAGTGGGACATGTATGAAAAGTTTAGCTTGGGAGGTAAGAGAAATGCTTCTCTGTTGAGCTTGAAACATTTAAATTACCTGGACCTAAGCTATAATGATTTTCATAGCAATCAAATTCCTAAGTTCTTTGGGGACCTTAAAACTCTACAATATCCCAATCTCTCCTCTACGTCATTTGGGAGAGAGATTCCCCCTTCTCTTGGTAACCTGTCAAGCCTGAGTTTTCTTGACCTCAATTCGAACTATGACCTAACTTCCAGAAATTTGAATTGGCTTTCTCGCCTCTCTTCTCTAAAATACCTTAATCTTGGAAATGTGAATCTTAGCACCATAGGAGTCAATTGGGTGTATGCTGTTAATATGCTTCCTTCATTAGCAGAGTTACACTTATCTTCATGCCAAATTGAAAGCATTTCACTCTCACTGCAGAGCATTAACTCGGCATCACTTTTTAATCTTACCAGCCTCATAGCACTTGATCTATCCTTTAATGATTTCGGTGATCCTTTCCCAAGTGAATTTGCAAACTTCAAATCTCTGGAATACCTTGATTTATCTTATACAAGCTTAAAAAGTCAAATTCCTAAAGTCATTGGAAATTTGTGCAAACTAAAGGTCTTAAGCCTTTCTCACAACGAATTTAATGGGGGGATAGAAGAGTTTTGGAGGAGTTTCTATAATTGTCCAAATATTGCATTAGAGTCACTAGATTTGGCTTACTGTGAGCTGGGAAGCCAATTGCCAGTCTCCTTAGGAATGTTTAAAAGTTTGCAGAATCTCAATCTTCATCACAACAATTTGCGGGGCTCAATTCCAGATTCCATTGGAAATTTGTCATCCTTGGAAACTTTGGACCTCTCTTCTAATATCATAAACGGCTCAATTCCAGATTCCATTGGAAACTTATCATCCTTGAAAACTTTGGACCTTTCTTCTAATTTTCTGAACGGCTCAATTCCAGATTCCATTGGAAACTTGTCGTCCTTGAAAACTTTGGACCTCTATTCTAATTTTATGAACGGCTTCATTCCACAAAGTTTGGGACAACTCTCTCAGCTAGTTTCCCACCATCTGTCTTCTAATTTTTGGGAGGGCATTCTAACGAAAGCCCATTTCATAAATCTTACCCAGTTACAAGATTTTAGTGTAGGAGACAAAAACCAGCCCATCTCCCTCATTTTCCACATGGCTTATGATTGGATTCCTCCATTCAAGCTACACACAATTAATATCATAAACTGTCGCTACAAAAAAAAATGGTCATTTGCTACCAACATTTTCCGAGGACCTATAAATACCCTCGTAAAAATTGCTATTTCCGACCAAAAATTATGCTCCGTCAGAAATATGTCGACAAGAGGTTTACTATTTTCAACACCCAAAATGCCCTTGGAAAAGGGTTCCTTCGCCGTTGGAAATAGCTATTTTTTTGAGGGAAAATTTGGAGCCACATTTATTTACGAAGAAACTTATTTTCGGGATATCTGTTTTAATTTGAAATGGGTTAGAAAGACAAGGGTGGTTGTCATCAAGCGAGGGTGGGTGTTAATAGCAAAGACAAGGGTGAGTGTCATTAAGCGAGTCATTCCTTCTCAAAAGCACGCCATCGTGGAAGGCAACAATCTGGTAAAGAAACATATCAAACATGGCCAAGGTCATGAAGGTGGGATTTTCATTGTTGAAGCGCTTCTACATTCGAACTCCTCAATGTGTGGTCCTGATTTTGGGGTATGGCTTCAATCACAAACTGAACTGGGCGACGTCACTCTTAGTGGTAATGAAATCTCGGATTCCATACCAGAGGAATGGCTATTGAAGAATTATGCCCAGCTCATCCGACTAGACTTGTCTTACAACCAATTTCGTGGAAACCTTCCATCCTATTTGAAATTTCCAAAATTAGAGTATCTTGATTTGAGTCATAATCAATTGGAGGGCCCACTCCCACTTTGGTGGTCCACTAATGCCATTTACCATGATCTTGAAAGTAATCTATTTTTCGGGCCAATTCCCTCCAATATTGACCAAATGATGCCCAATTTGAAAACCTTGTTACTTTCTGAGAATCATTTGACTGGCACTATTCCTCCCTCTGTTTGCAACATGCAGCAATTGGAAGTCTTGTCTCTAAGGAGTAATCAGATTTATGGAGAATTGCCTCATGCATGGAGTGTGGGGAGCAAACTGGGGTTTCTAGATGTTAGTATGAACAATCTCTCTGGTAATATTCCCACTTCATTGGGGGTATTAAGTTCACTGCAAATATTAAAGCTTAACAACAACAATTTTGGCAGTGAAATTCCTGATTCGTTGCAAAATTGTTCTATTTTGATAAGTCTAGATCTTGGAGACAACAAGTTATATGGTAACATACCTCTATGGATAGGAGGACCAAATGTATCCGTGTTGTATCGGATACGATTACGGTTCAACTATTTTAGTGGACATATATTTCAGCAAGCCACATTGACGCTAAAAGGAAGCAAACTTGTGTACAACAAGACTTTAGATCTTGTAAAGAGCATTGATCTTTCATCAAATAATTTACAAGGTGAAATCCCTGAAGAAATAAGTAGCCTCATTCTATTGGGTACCTTGAAATTGTCCAGGAATCAATTGACTGGAAAGATCCCCTCCAAGATCGGAAACTTGCATTTGCTCGAAACTCTTGATCTCTCACACAACCACCTTTCAGGATAG
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families

Protein Analysis

1002

Amino Acids

112.11

Weight (kDa)

7.6

Isoelectric Point (pI)

35.16

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
LRRNT_2 PF08263 49 - 86 5.6e-12 Leucine rich repeat N-terminal domain
LRR_14 PF23598 117 - 266 4.4e-11 Leucine-rich repeat region
LRR_8 PF13855 261 - 315 5.1e-06 Leucine rich repeat
LRR_8 PF13855 335 - 391 1e-05 Leucine rich repeat
LRR_14 PF23598 337 - 516 1.8e-15 Leucine-rich repeat region
LRR_8 PF13855 358 - 415 1.2e-08 Leucine rich repeat
LRR_8 PF13855 406 - 463 8.8e-06 Leucine rich repeat
LRR_8 PF13855 941 - 999 8.6e-06 Leucine rich repeat
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready

Orthologous Genes (Group: OG0000048)

Species Orthologous Gene IDs
arabidopsis_thaliana AT2G34930
fragaria_vesca FvH4_3g12670 FvH4_3g12672 FvH4_3g12740 FvH4_3g12742 FvH4_3g12770 FvH4_3g12770 FvH4_3g12860 FvH4_3g12890 FvH4_3g13431 FvH4_3g13433 FvH4_3g13435 FvH4_3g13470 FvH4_3g13470 FvH4_3g13480 FvH4_3g13562 FvH4_3g13580 FvH4_3g13600 FvH4_3g13600 FvH4_3g13600 FvH4_3g13600 FvH4_3g13600 FvH4_3g13600 FvH4_3g13610 FvH4_3g13620 FvH4_3g13620 FvH4_3g23240 FvH4_3g32910 FvH4_3g35070 FvH4_3g45520 FvH4_5g08430 FvH4_5g08450 FvH4_6g53230 FvH4_6g53300
malus_domestica MD05G1217600.v1.1 MD05G1217700.v1.1 MD05G1224700.v1.1 MD05G1225100.v1.1 MD05G1225300.v1.1 MD05G1225400.v1.1 MD05G1235900.v1.1 MD05G1236100.v1.1 MD05G1236300.v1.1 MD05G1237200.v1.1 MD05G1241600.v1.1 MD05G1245700.v1.1 MD05G1245800.v1.1 MD05G1245900.v1.1 MD05G1246000.v1.1 MD05G1246100.v1.1 MD05G1246300.v1.1 MD05G1246400.v1.1 MD05G1246500.v1.1 MD05G1248100.v1.1 MD05G1248200.v1.1 MD05G1264300.v1.1 MD05G1275900.v1.1 MD07G1051400.v1.1 MD09G1012600.v1.1 MD09G1012700.v1.1 MD09G1012800.v1.1 MD10G1221400.v1.1 MD10G1221500.v1.1 MD10G1221600.v1.1 MD10G1221900.v1.1 MD10G1222200.v1.1 MD10G1222400.v1.1 MD10G1222500.v1.1 MD10G1222900.v1.1 MD10G1223000.v1.1 MD10G1223100.v1.1 MD10G1223500.v1.1 MD10G1228000.v1.1 MD12G1019600.v1.1 MD12G1020000.v1.1 MD12G1020100.v1.1 MD17G1013200.v1.1 MD17G1013300.v1.1 MD17G1013400.v1.1
prunus_persica Prupe.1G060500_v2.0.a1 Prupe.1G100100_v2.0.a1 Prupe.3G124000_v2.0.a1 Prupe.3G304400_v2.0.a1 Prupe.4G116800_v2.0.a1 Prupe.4G116900_v2.0.a1 Prupe.4G117000_v2.0.a1 Prupe.4G121800_v2.0.a1 Prupe.4G121900_v2.0.a1 Prupe.4G122000_v2.0.a1 Prupe.4G122100_v2.0.a1 Prupe.4G122200_v2.0.a1 Prupe.4G122300_v2.0.a1 Prupe.4G122500_v2.0.a1 Prupe.4G122600_v2.0.a1 Prupe.4G122800_v2.0.a1 Prupe.4G122900_v2.0.a1 Prupe.4G123000_v2.0.a1 Prupe.4G123100_v2.0.a1 Prupe.4G123200_v2.0.a1 Prupe.4G131500_v2.0.a1 Prupe.4G131600_v2.0.a1 Prupe.7G032500_v2.0.a1 Prupe.7G032900_v2.0.a1 Prupe.7G033000_v2.0.a1 Prupe.7G033100_v2.0.a1 Prupe.7G033300_v2.0.a1 Prupe.7G033600_v2.0.a1 Prupe.7G034600_v2.0.a1 Prupe.7G040200_v2.0.a1 Prupe.7G059200_v2.0.a1
pyrus_communis pycom05g20580 pycom05g20590 pycom05g20760 pycom05g20800 pycom05g21280 pycom05g21290 pycom05g21820 pycom05g21830 pycom05g22180 pycom05g22190 pycom05g22210 pycom05g22450 pycom05g22460 pycom05g22470 pycom05g22480 pycom05g22490 pycom05g23770 pycom05g23780 pycom05g24050 pycom05g24060 pycom07g03910 pycom10g18700 pycom10g18720 pycom10g18730 pycom10g18740 pycom10g19150 pycom111g01060 pycom12g01660 pycom12g01690 pycom12g01720 pycom12g01740 pycom12g01750 pycom12g01770 pycom12g01810 pycom12g01820 pycom12g01830 pycom12g01840 pycom12g01870 pycom12g01900 pycom17g01060 pycom17g01070
rosa_chinensis RchiOBHm_Chr1g0315041 RchiOBHm_Chr1g0315051 RchiOBHm_Chr1g0315071 RchiOBHm_Chr1g0315161 RchiOBHm_Chr1g0315211 RchiOBHm_Chr1g0315251 RchiOBHm_Chr1g0315321 RchiOBHm_Chr1g0315391 RchiOBHm_Chr1g0315451 RchiOBHm_Chr1g0315481 RchiOBHm_Chr1g0315551 RchiOBHm_Chr1g0315601 RchiOBHm_Chr1g0315621 RchiOBHm_Chr1g0359221 RchiOBHm_Chr2g0142981 RchiOBHm_Chr2g0143001 RchiOBHm_Chr2g0143061 RchiOBHm_Chr2g0143091 RchiOBHm_Chr2g0175321 RchiOBHm_Chr2g0175341 RchiOBHm_Chr2g0175361 RchiOBHm_Chr2g0175371 RchiOBHm_Chr3g0470491 RchiOBHm_Chr3g0480881 RchiOBHm_Chr3g0485511 RchiOBHm_Chr5g0020741 RchiOBHm_Chr5g0020901 RchiOBHm_Chr5g0020931 RchiOBHm_Chr5g0020941 RchiOBHm_Chr5g0020961 RchiOBHm_Chr5g0020971 RchiOBHm_Chr5g0021451 RchiOBHm_Chr5g0021531 RchiOBHm_Chr5g0021831 RchiOBHm_Chr5g0021841 RchiOBHm_Chr5g0021931 RchiOBHm_Chr5g0021941 RchiOBHm_Chr5g0021981 RchiOBHm_Chr5g0021991 RchiOBHm_Chr5g0022011 RchiOBHm_Chr5g0022181 RchiOBHm_Chr5g0022191 RchiOBHm_Chr5g0022211 RchiOBHm_Chr5g0022221 RchiOBHm_Chr5g0022231 RchiOBHm_Chr5g0022291 RchiOBHm_Chr5g0022301 RchiOBHm_Chr5g0022331 RchiOBHm_Chr5g0022361 RchiOBHm_Chr5g0022371 RchiOBHm_Chr5g0022381 RchiOBHm_Chr5g0022401 RchiOBHm_Chr5g0022431 RchiOBHm_Chr5g0022451 RchiOBHm_Chr5g0022541 RchiOBHm_Chr5g0022591 RchiOBHm_Chr5g0022601 RchiOBHm_Chr5g0022701 RchiOBHm_Chr5g0022741 RchiOBHm_Chr5g0022791 RchiOBHm_Chr5g0022811 RchiOBHm_Chr5g0022851 RchiOBHm_Chr5g0029441 RchiOBHm_Chr5g0041631 RchiOBHm_Chr5g0069391 RchiOBHm_Chr6g0273811 RchiOBHm_Chr6g0273831 RchiOBHm_Chr6g0275331 RchiOBHm_Chr7g0219061
rosa_laevigata RLG00000002463 RLG00000020007 RLG00000020008 RLG00000022320 RLG00000022321 RLG00000023446 RLG00000030742 RLG00000030743 RLG00000030747 RLG00000032557 RLG00000032564 RLG00000032571 RLG00000032573 RLG00000032574 RLG00000032612 RLG00000032633 RLG00000032636 RLG00000032638 RLG00000032650 RLG00000032651 RLG00000032652 RLG00000032653 RLG00000032655 RLG00000032673 RLG00000032678 RLG00000032769 RLG00000032857 RLG00000033168 RLG00000033465 RLG00000034086 RLG00000034222 RLG00000035290
rosa_multiflora Rmu_co8143358.1_g000001 Rmu_co8518791.1_g000001 Rmu_sc0000178.1_g000008 Rmu_sc0000178.1_g000014 Rmu_sc0000401.1_g000005 Rmu_sc0000401.1_g000013 Rmu_sc0000401.1_g000017 Rmu_sc0000401.1_g000018 Rmu_sc0000401.1_g000024 Rmu_sc0000401.1_g000025 Rmu_sc0000576.1_g000020 Rmu_sc0001585.1_g000003 Rmu_sc0001585.1_g000005 Rmu_sc0001585.1_g000008 Rmu_sc0001784.1_g000006 Rmu_sc0001784.1_g000011 Rmu_sc0001784.1_g000022 Rmu_sc0001784.1_g000028 Rmu_sc0002052.1_g000004 Rmu_sc0002052.1_g000011 Rmu_sc0002277.1_g000003 Rmu_sc0002277.1_g000006 Rmu_sc0002277.1_g000024 Rmu_sc0002658.1_g000012 Rmu_sc0003512.1_g000004 Rmu_sc0003512.1_g000007 Rmu_sc0004180.1_g000016 Rmu_sc0004180.1_g000029 Rmu_sc0004180.1_g000034 Rmu_sc0005639.1_g000008 Rmu_sc0005639.1_g000023 Rmu_sc0006070.1_g000016 Rmu_sc0006070.1_g000017 Rmu_sc0006966.1_g000021 Rmu_sc0006966.1_g000023 Rmu_sc0007239.1_g000003 Rmu_sc0008460.1_g000010 Rmu_sc0009984.1_g000008 Rmu_sc0010181.1_g000005 Rmu_sc0010181.1_g000010 Rmu_sc0010503.1_g000006 Rmu_sc0011646.1_g000003 Rmu_sc0012984.1_g000011 Rmu_sc0016972.1_g000005 Rmu_sc0016972.1_g000008 Rmu_sc0023070.1_g000003 Rmu_sc0025660.1_g000001 Rmu_ssc0000322.1_g000019
rosa_roxburghii Rroxscaffold_1G00038860 Rroxscaffold_1G00053490 Rroxscaffold_1G00053500 Rroxscaffold_1G00054230 Rroxscaffold_1G00056460 Rroxscaffold_1G00056470 Rroxscaffold_1G00056480 Rroxscaffold_1G00056500 Rroxscaffold_1G00056510 Rroxscaffold_1G00056620 Rroxscaffold_1G00056690 Rroxscaffold_1G00056710 Rroxscaffold_1G00056720 Rroxscaffold_1G00056730 Rroxscaffold_1G00056740 Rroxscaffold_1G00056750 Rroxscaffold_1G00056760 Rroxscaffold_1G00056870 Rroxscaffold_1G00056900 Rroxscaffold_1G00057120 Rroxscaffold_1G00057560 Rroxscaffold_2G00077430 Rroxscaffold_2G00102160 Rroxscaffold_3G00231420 Rroxscaffold_3G00231430 Rroxscaffold_4G00297230 Rroxscaffold_4G00331570 Rroxscaffold_6G00396700 Rroxscaffold_6G00400940 Rroxscaffold_7G00192740
rosa_rugosa Rorug01G0004400 Rorug01G0004500 Rorug02G0377600 Rorug02G0378000 Rorug02G0582800 Rorug02G0583400 Rorug03G0187000 Rorug03G0218800 Rorug04G0081200 Rorug05G0062700 Rorug05G0062700 Rorug05G0063100 Rorug05G0063200 Rorug05G0063200 Rorug05G0063200 Rorug05G0067000 Rorug05G0069700 Rorug05G0069900 Rorug05G0070000 Rorug05G0070100 Rorug05G0070300 Rorug05G0070400 Rorug05G0070600 Rorug05G0070600 Rorug05G0072300 Rorug05G0072400 Rorug05G0072500 Rorug05G0072500 Rorug05G0072600.1 Rorug05G0072700 Rorug05G0072800 Rorug05G0072800 Rorug05G0072900 Rorug05G0073000 Rorug05G0073000 Rorug05G0073400 Rorug05G0073400 Rorug05G0073400 Rorug05G0074800 Rorug05G0075000 Rorug05G0114300 Rorug05G0194200 Rorug06G0097800
rosa_samantha Rh2AG401400 Rh2CG387600 Rh2CG417000 Rh2CG637400 Rh5CG169600 Rh5CG172100 Rh5CG175200 Rh5CG317100 Rh6DG187900
rosa_wichuraiana Rw1G000750 Rw1G000790 Rw1G000820 Rw1G000860 Rw1G000880 Rw1G000910 Rw2G035180 Rw2G035200 Rw2G035240 Rw2G054370 Rw2G054380 Rw5G013570 Rw5G013580 Rw5G013590 Rw5G013910 Rw5G013980 Rw5G014110 Rw5G014120 Rw5G014280 Rw5G014310 Rw5G014400 Rw5G014420 Rw5G014440 Rw5G014460 Rw5G014480 Rw5G014500 Rw5G014520 Rw5G014530 Rw5G042390

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AatII GACGTC 1 cut(s) 2070
Acc65I GGTACC 1 cut(s) 2897
AccB1I GGYRCC 1 cut(s) 2897
AccI GTMKAC 1 cut(s) 1658
AccIII TCCGGA 1 cut(s) 291
AciI CCGC 2 cut(s) 262, 1108
AclWI GGATC 2 cut(s) 803, 2929
AcoI YGGCCR 2 cut(s) 99, 1954
AcuI CTGAAG 1 cut(s) 2889
AcyI GRCGYC 1 cut(s) 2067
AfaI GTAC 3 cut(s) 76, 2801, 2899
AfeI AGCGCT 2 cut(s) 162, 1992
AfiI CCNNNNNNNGG 2 cut(s) 506, 2030
AflII CTTAAG 1 cut(s) 925
AflIII ACRYGT 1 cut(s) 315
AgeI ACCGGT 1 cut(s) 266
AjnI CCWGG 2 cut(s) 384, 2912
AjuI GAANNNNNNNTTGG 2 cut(s) 559, 591
AleI CACNNNNGTG 1 cut(s) 2257
Alw21I GWGCWC 1 cut(s) 112
Alw26I GTCTC 4 cut(s) 1057, 1452, 2436, 2649
Alw44I GTGCAC 1 cut(s) 108
AlwI GGATC 2 cut(s) 803, 2929
Aor13HI TCCGGA 1 cut(s) 291
Aor51HI AGCGCT 2 cut(s) 162, 1992
AoxI GGCC 4 cut(s) 99, 1954, 2242, 2309
ApaI GGGCCC 1 cut(s) 2246
ApaLI GTGCAC 1 cut(s) 108
ApeKI GCWGC 1 cut(s) 2413
ArsI GACNNNNNNTTYG 2 cut(s) 906, 938
AseI ATTAAT 1 cut(s) 1533
AsiGI ACCGGT 1 cut(s) 266
Asp700I GAANNNNTTC 3 cut(s) 352, 1328, 1992
Asp718I GGTACC 1 cut(s) 2897
AspLEI GCGC 2 cut(s) 163, 1993
AsuHPI GGTGA 5 cut(s) 8, 289, 818, 1882, 2870
AsuII TTCGAA 2 cut(s) 545, 2003
AxyI CCTNAGG 1 cut(s) 1057
BaeGI GKGCMC 2 cut(s) 112, 2246
BalI TGGCCA 1 cut(s) 1956
BanI GGYRCC 1 cut(s) 2897
BanII GRGCYC 2 cut(s) 1115, 2246
BarI GAAGNNNNNNTAC 2 cut(s) 1980, 2012
BbsI GAAGAC 1 cut(s) 1374
Bbv12I GWGCWC 1 cut(s) 112
BbvI GCAGC 1 cut(s) 2425
BccI CCATC 5 cut(s) 277, 1383, 1481, 1919, 2191
BceAI ACGGC 4 cut(s) 1198, 1270, 1342, 1700
BciT130I CCWGG 2 cut(s) 386, 2914
BciVI GTATCC 2 cut(s) 2715, 2716
BcoDI GTCTC 4 cut(s) 1057, 1452, 2436, 2649
BfaI CTAG 5 cut(s) 1013, 1364, 2147, 2501, 2645
BfmI CTRYAG 1 cut(s) 731
BfoI RGCGCY 2 cut(s) 164, 1994
BfrI CTTAAG 1 cut(s) 925
BfuI GTATCC 2 cut(s) 2715, 2716
BglII AGATCT 2 cut(s) 2647, 2815
BisI GCNGC 1 cut(s) 2414
BlsI GCNGC 1 cut(s) 2415
BmcAI AGTACT 1 cut(s) 76
Bme1390I CCNGG 2 cut(s) 386, 2914
BmiI GGNNCC 5 cut(s) 440, 1708, 1753, 2244, 2899
BmrFI CCNGG 2 cut(s) 386, 2914
BmrI ACTGGG 4 cut(s) 15, 1429, 2069, 2501
BmsI GCATC 4 cut(s) 150, 181, 758, 2328
BmuI ACTGGG 4 cut(s) 15, 1429, 2069, 2501
BpiI GAAGAC 1 cut(s) 1374
Bpu10I CCTNAGC 1 cut(s) 392
Bpu14I TTCGAA 2 cut(s) 545, 2003
BsaHI GRCGYC 1 cut(s) 2067
BsaJI CCNNGG 4 cut(s) 1146, 1588, 1695, 1957
BsaWI WCCGGW 2 cut(s) 266, 291
BsaXI ACNNNNNCTCC 2 cut(s) 2377, 2407
Bsc4I CCNNNNNNNGG 2 cut(s) 506, 2030
Bse118I RCCGGY 2 cut(s) 101, 266
Bse1I ACTGG 7 cut(s) 21, 1049, 1435, 2064, 2386, 2496, 2932
Bse21I CCTNAGG 1 cut(s) 1057
BseAI TCCGGA 1 cut(s) 291
BseBI CCWGG 2 cut(s) 386, 2914
BseDI CCNNGG 4 cut(s) 1146, 1588, 1695, 1957
BseGI GGATG 4 cut(s) 1142, 1214, 2139, 2183
BseLI CCNNNNNNNGG 2 cut(s) 506, 2030
BseMII CTCAG 3 cut(s) 515, 1373, 2358
BseNI ACTGG 7 cut(s) 21, 1049, 1435, 2064, 2386, 2496, 2932
BseRI GAGGAG 3 cut(s) 460, 988, 1999
BseSI GKGCMC 2 cut(s) 112, 2246
BseXI GCAGC 1 cut(s) 2425
BseYI CCCAGC 2 cut(s) 1033, 2133
BshFI GGCC 4 cut(s) 101, 1956, 2244, 2311
BshNI GGYRCC 1 cut(s) 2897
BshTI ACCGGT 1 cut(s) 266
BsiHKAI GWGCWC 1 cut(s) 112
BsiSI CCGG 3 cut(s) 102, 267, 292
BslFI GGGAC 3 cut(s) 326, 452, 1362
BslI CCNNNNNNNGG 2 cut(s) 506, 2030
BsmAI GTCTC 4 cut(s) 1057, 1452, 2436, 2649
BsmFI GGGAC 3 cut(s) 326, 452, 1362
BsmI GAATGC 1 cut(s) 1401
BsnI GGCC 4 cut(s) 101, 1956, 2244, 2311
Bsp119I TTCGAA 2 cut(s) 545, 2003
Bsp120I GGGCCC 1 cut(s) 2242
Bsp1286I GDGCHC 3 cut(s) 112, 1115, 2246
Bsp13I TCCGGA 1 cut(s) 291
Bsp1407I TGTACA 1 cut(s) 2799
Bsp143I GATC 9 cut(s) 784, 808, 2284, 2647, 2815, 2833, 2934, 2946, 2977
BspACI CCGC 2 cut(s) 262, 1108
BspANI GGCC 4 cut(s) 101, 1956, 2244, 2311
BspCNI CTCAG 3 cut(s) 516, 1372, 2359
BspEI TCCGGA 1 cut(s) 291
BspHI TCATGA 1 cut(s) 1963
BspLI GGNNCC 5 cut(s) 440, 1708, 1753, 2244, 2899
BspMAI CTGCAG 1 cut(s) 735
BspPI GGATC 2 cut(s) 803, 2929
BspT104I TTCGAA 2 cut(s) 545, 2003
BspT107I GGYRCC 1 cut(s) 2897
BspTI CTTAAG 1 cut(s) 925
BsrFI RCCGGY 2 cut(s) 101, 266
BsrGI TGTACA 1 cut(s) 2799
BsrI ACTGG 7 cut(s) 21, 1049, 1435, 2064, 2386, 2496, 2932
BssAI RCCGGY 2 cut(s) 101, 266
BssECI CCNNGG 4 cut(s) 1146, 1588, 1695, 1957
BssMI GATC 9 cut(s) 784, 808, 2284, 2647, 2815, 2833, 2934, 2946, 2977
BssNI GRCGYC 1 cut(s) 2067
BssT1I CCWWGG 3 cut(s) 1146, 1695, 1957
Bst2UI CCWGG 2 cut(s) 386, 2914
Bst4CI ACNGT 3 cut(s) 1028, 1547, 2733
Bst6I CTCTTC 5 cut(s) 64, 300, 598, 957, 1171
BstACI GRCGYC 1 cut(s) 2067
BstAFI CTTAAG 1 cut(s) 925
BstAUI TGTACA 1 cut(s) 2799
BstBI TTCGAA 2 cut(s) 545, 2003
BstC8I GCNNGC 2 cut(s) 1908, 2766
BstDEI CTNAG 9 cut(s) 392, 426, 524, 629, 1057, 1359, 2075, 2367, 2435
BstEII GGTNACC 1 cut(s) 509
BstF5I GGATG 4 cut(s) 1142, 1214, 2139, 2183
BstH2I RGCGCY 2 cut(s) 164, 1994
BstHHI GCGC 2 cut(s) 163, 1993
BstKTI GATC 9 cut(s) 787, 811, 2287, 2650, 2818, 2836, 2937, 2949, 2980
BstMAI GTCTC 4 cut(s) 1057, 1452, 2436, 2649
BstMBI GATC 9 cut(s) 784, 808, 2284, 2647, 2815, 2833, 2934, 2946, 2977
BstMWI GCNNNNNNNGC 2 cut(s) 107, 261
BstNI CCWGG 2 cut(s) 386, 2914
BstNSI RCATGY 3 cut(s) 70, 319, 2413
BstPI GGTNACC 1 cut(s) 509
BstSCI CCNGG 2 cut(s) 384, 2912
BstSFI CTRYAG 1 cut(s) 731
BstSLI GKGCMC 2 cut(s) 112, 2246
BstV1I GCAGC 1 cut(s) 2425
BstV2I GAAGAC 1 cut(s) 1374
BstX2I RGATCY 3 cut(s) 2647, 2815, 2934
BstXI CCANNNNNNTGG 4 cut(s) 2112, 2171, 2259, 2545
BstYI RGATCY 3 cut(s) 2647, 2815, 2934
Bsu36I CCTNAGG 1 cut(s) 1057
BsuI GTATCC 2 cut(s) 2715, 2716
BsuRI GGCC 4 cut(s) 101, 1956, 2244, 2311
BtsCI GGATG 4 cut(s) 1142, 1214, 2139, 2183
BtsI GCAGTG 4 cut(s) 127, 728, 2561, 2605
BtsIMutI CAGTG 4 cut(s) 127, 728, 2561, 2605
Cac8I GCNNGC 2 cut(s) 1908, 2766
CciI TCATGA 1 cut(s) 1963
CfoI GCGC 2 cut(s) 163, 1993
Cfr10I RCCGGY 2 cut(s) 101, 266
CseI GACGC 1 cut(s) 2785
Csp6I GTAC 3 cut(s) 75, 2800, 2898
CspAI ACCGGT 1 cut(s) 266
CspCI CAANNNNNGTGG 2 cut(s) 1326, 1361
CviQI GTAC 3 cut(s) 75, 2800, 2898
DdeI CTNAG 9 cut(s) 392, 426, 524, 629, 1057, 1359, 2075, 2367, 2435
DpnI GATC 9 cut(s) 786, 810, 2286, 2649, 2817, 2835, 2936, 2948, 2979
DpnII GATC 9 cut(s) 784, 808, 2284, 2647, 2815, 2833, 2934, 2946, 2977
DraI TTTAAA 3 cut(s) 175, 378, 1069
EaeI YGGCCR 2 cut(s) 99, 1954
Eam1104I CTCTTC 5 cut(s) 64, 300, 598, 957, 1171
EarI CTCTTC 5 cut(s) 64, 300, 598, 957, 1171
Eco130I CCWWGG 3 cut(s) 1146, 1695, 1957
Eco24I GRGCYC 2 cut(s) 1115, 2246
Eco32I GATATC 1 cut(s) 1789
Eco47III AGCGCT 2 cut(s) 162, 1992
Eco57I CTGAAG 1 cut(s) 2889
Eco81I CCTNAGG 1 cut(s) 1057
Eco91I GGTNACC 1 cut(s) 509
EcoO109I RGGNCCY 3 cut(s) 439, 1592, 2242
EcoO65I GGTNACC 1 cut(s) 509
EcoRII CCWGG 2 cut(s) 384, 2912
EcoRV GATATC 1 cut(s) 1789
EcoT14I CCWWGG 3 cut(s) 1146, 1695, 1957
EcoT22I ATGCAT 2 cut(s) 143, 2473
EcoT38I GRGCYC 2 cut(s) 1115, 2246
ErhI CCWWGG 3 cut(s) 1146, 1695, 1957
FalI AAGNNNNNCTT 4 cut(s) 317, 349, 1694, 1726
FaqI GGGAC 3 cut(s) 326, 452, 1362
FauI CCCGC 1 cut(s) 1101
FblI GTMKAC 1 cut(s) 1658
Fnu4HI GCNGC 1 cut(s) 2414
FokI GGATG 4 cut(s) 1129, 1201, 2126, 2170
FriOI GRGCYC 2 cut(s) 1115, 2246
Fsp4HI GCNGC 1 cut(s) 2414
FspBI CTAG 5 cut(s) 1013, 1364, 2147, 2501, 2645
GlaI GCGC 2 cut(s) 162, 1992
GluI GCNGC 1 cut(s) 2414
GsaI CCCAGC 2 cut(s) 1037, 2137
HaeII RGCGCY 2 cut(s) 164, 1994
HaeIII GGCC 4 cut(s) 101, 1956, 2244, 2311
HapII CCGG 3 cut(s) 102, 267, 292
HgaI GACGC 1 cut(s) 2785
HhaI GCGC 2 cut(s) 163, 1993
Hin1I GRCGYC 1 cut(s) 2067
Hin6I GCGC 2 cut(s) 161, 1991
HinP1I GCGC 2 cut(s) 161, 1991
HincII GTYRAC 1 cut(s) 1659
HindII GTYRAC 1 cut(s) 1659
HindIII AAGCTT 2 cut(s) 871, 2576
HpaII CCGG 3 cut(s) 102, 267, 292
HphI GGTGA 5 cut(s) 8, 289, 818, 1882, 2870
Hpy166II GTNNAC 7 cut(s) 110, 1659, 1670, 2265, 2561, 2750, 2800
Hpy8I GTNNAC 7 cut(s) 110, 1659, 1670, 2265, 2561, 2750, 2800
Hpy99I CGWCG 2 cut(s) 149, 2069
HpyAV CCTTC 8 cut(s) 50, 510, 684, 1720, 1905, 1913, 1961, 2189
HpyCH4III ACNGT 3 cut(s) 1028, 1547, 2733
HpyCH4IV ACGT 2 cut(s) 476, 2067
HpyF10VI GCNNNNNNNGC 2 cut(s) 107, 261
HpyF3I CTNAG 9 cut(s) 392, 426, 524, 629, 1057, 1359, 2075, 2367, 2435
HpySE526I ACGT 2 cut(s) 476, 2067
Hsp92I GRCGYC 1 cut(s) 2067
HspAI GCGC 2 cut(s) 161, 1991
Kpn2I TCCGGA 1 cut(s) 291
KpnI GGTACC 1 cut(s) 2901
Kzo9I GATC 9 cut(s) 784, 808, 2284, 2647, 2815, 2833, 2934, 2946, 2977
LmnI GCTCC 3 cut(s) 1646, 1751, 2484
Lsp1109I GCAGC 1 cut(s) 2425
LweI GCATC 4 cut(s) 150, 181, 758, 2328
MaeI CTAG 5 cut(s) 1013, 1364, 2147, 2501, 2645
MaeII ACGT 2 cut(s) 476, 2067
MaeIII GTNAC 8 cut(s) 221, 509, 687, 1008, 1437, 2068, 2358, 2672
MalI GATC 9 cut(s) 786, 810, 2286, 2649, 2817, 2835, 2936, 2948, 2979
MboI GATC 9 cut(s) 784, 808, 2284, 2647, 2815, 2833, 2934, 2946, 2977
MfeI CAATTG 5 cut(s) 646, 1043, 2234, 2417, 2921
MflI RGATCY 3 cut(s) 2647, 2815, 2934
MhlI GDGCHC 3 cut(s) 112, 1115, 2246
MlsI TGGCCA 1 cut(s) 1956
MluNI TGGCCA 1 cut(s) 1956
MlyI GAGTC 4 cut(s) 651, 1016, 1896, 2233
MmeI TCCRAC 3 cut(s) 1650, 1699, 2167
Mox20I TGGCCA 1 cut(s) 1956
Mph1103I ATGCAT 2 cut(s) 143, 2473
MroI TCCGGA 1 cut(s) 291
MroXI GAANNNNTTC 3 cut(s) 352, 1328, 1992
MscI TGGCCA 1 cut(s) 1956
MslI CAYNNNNRTG 2 cut(s) 1968, 2257
Msp20I TGGCCA 1 cut(s) 1956
MspCI CTTAAG 1 cut(s) 925
MspI CCGG 3 cut(s) 102, 267, 292
MspR9I CCNGG 2 cut(s) 386, 2914
MunI CAATTG 5 cut(s) 646, 1043, 2234, 2417, 2921
Mva1269I GAATGC 1 cut(s) 1401
MvaI CCWGG 2 cut(s) 386, 2914
MwoI GCNNNNNNNGC 2 cut(s) 107, 261
NdeII GATC 9 cut(s) 784, 808, 2284, 2647, 2815, 2833, 2934, 2946, 2977
NlaIV GGNNCC 5 cut(s) 440, 1708, 1753, 2244, 2899
NmeAIII GCCGAG 1 cut(s) 725
NmuCI GTSAC 3 cut(s) 221, 1008, 2068
NsiI ATGCAT 2 cut(s) 143, 2473
NspI RCATGY 3 cut(s) 70, 319, 2413
NspV TTCGAA 2 cut(s) 545, 2003
OliI CACNNNNGTG 1 cut(s) 2257
PagI TCATGA 1 cut(s) 1963
PciI ACATGT 1 cut(s) 315
PctI GAATGC 1 cut(s) 1401
PdmI GAANNNNTTC 3 cut(s) 352, 1328, 1992
PfoI TCCNGGA 1 cut(s) 2912
PinAI ACCGGT 1 cut(s) 266
PkrI GCNGC 1 cut(s) 2415
PleI GAGTC 4 cut(s) 650, 1015, 1895, 2232
PpsI GAGTC 4 cut(s) 650, 1015, 1895, 2232
PpuMI RGGWCCY 2 cut(s) 439, 1592
PscI ACATGT 1 cut(s) 315
PshBI ATTAAT 1 cut(s) 1533
Psp5II RGGWCCY 2 cut(s) 439, 1592
Psp6I CCWGG 2 cut(s) 384, 2912
PspEI GGTNACC 1 cut(s) 509
PspFI CCCAGC 2 cut(s) 1033, 2133
PspGI CCWGG 2 cut(s) 384, 2912
PspN4I GGNNCC 5 cut(s) 440, 1708, 1753, 2244, 2899
PspOMI GGGCCC 1 cut(s) 2242
PspPPI RGGWCCY 2 cut(s) 439, 1592
PstI CTGCAG 1 cut(s) 735
PsuI RGATCY 3 cut(s) 2647, 2815, 2934
RsaI GTAC 3 cut(s) 76, 2801, 2899
RsaNI GTAC 3 cut(s) 75, 2800, 2898
RseI CAYNNNNRTG 2 cut(s) 1968, 2257
SalI GTCGAC 1 cut(s) 1657
SatI GCNGC 1 cut(s) 2414
Sau3AI GATC 9 cut(s) 784, 808, 2284, 2647, 2815, 2833, 2934, 2946, 2977
ScaI AGTACT 1 cut(s) 76
SchI GAGTC 4 cut(s) 651, 1016, 1896, 2233
ScrFI CCNGG 2 cut(s) 386, 2914
SduI GDGCHC 3 cut(s) 112, 1115, 2246
SfaNI GCATC 4 cut(s) 150, 181, 758, 2328
SfcI CTRYAG 1 cut(s) 731
SfuI TTCGAA 2 cut(s) 545, 2003
SmiI ATTTAAAT 1 cut(s) 378
SmiMI CAYNNNNRTG 2 cut(s) 1968, 2257
SmlI CTYRAG 1 cut(s) 925
SmoI CTYRAG 1 cut(s) 925
SsiI CCGC 2 cut(s) 262, 1108
SspI AATATT 4 cut(s) 997, 2326, 2533, 2571
SspMI CTAG 5 cut(s) 1013, 1364, 2147, 2501, 2645
StyD4I CCNGG 2 cut(s) 384, 2912
StyI CCWWGG 3 cut(s) 1146, 1695, 1957
SwaI ATTTAAAT 1 cut(s) 378
TaaI ACNGT 3 cut(s) 1028, 1547, 2733
TaiI ACGT 2 cut(s) 479, 2070
TaqI TCGA 5 cut(s) 144, 545, 1658, 2003, 2967
TatI WGTACW 2 cut(s) 74, 2799
TscAI CASTG 4 cut(s) 127, 735, 2568, 2605
TseFI GTSAC 3 cut(s) 221, 1008, 2068
TseI GCWGC 1 cut(s) 2413
Tsp45I GTSAC 3 cut(s) 221, 1008, 2068
TspGWI ACGGA 3 cut(s) 288, 1633, 2698
TspRI CASTG 4 cut(s) 127, 735, 2568, 2605
Vha464I CTTAAG 1 cut(s) 925
VneI GTGCAC 1 cut(s) 108
VspI ATTAAT 1 cut(s) 1533
XbaI TCTAGA 2 cut(s) 2500, 2644
XceI RCATGY 3 cut(s) 70, 319, 2413
XcmI CCANNNNNNNNNTGG 2 cut(s) 1693, 2253
XmiI GTMKAC 1 cut(s) 1658
XmnI GAANNNNTTC 3 cut(s) 352, 1328, 1992
XspI CTAG 5 cut(s) 1013, 1364, 2147, 2501, 2645
ZraI GACGTC 1 cut(s) 2068
ZrmI AGTACT 1 cut(s) 76
Zsp2I ATGCAT 2 cut(s) 143, 2473
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.