Basic Information

Type: gene

Biological Identity

Species

malus_domestica

Chromosome

Chr10

Orthogroup ID

OG0000048

Physical Location & Seq

Genomic Coordinates Forward (+)

32477894 .. 32480977

Gene Structure 3084 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

MD10G1228000.v1.1.491

Sequence Viewer

CDS Protein Promoter (2k)

Length: 3084 bp

ATGATGGATGCCCTGTATGCTAAGTTATTCAACCCTACCTATCACCTCAATAATTCTCACTATTTGCTCTTCTTGTTGTTGGTGTCCTTATATCTAGACACTGCTAAAGTCTGCTTGGGTGATGGACTTCCGGGCATTACTGTGAAGTTGTGCATGGATGAAGAGAGACGTGCGCTTCTCAACATCAAGCAAGATCTCACCGATCCCTCTGGCAGGCTTTCTTCTTGGGTAGGCAATGATTGTTGTCAATGGGAAGGGATTTCATGCAACTACACCACAGGTCATGTTGCGAAGCTGGACCTCCGGAATAAGCATGAGCCAAATCCCACTGGTGATGATGAAAACTGGGACGAGCTTGCTTATGAACGTTCGTGCTTAGGTGGTAAGATAAATCCTTCTTTGCTTCGCTTGAAACATTTAAATTACCTAGATCTAAGCTCCAACAATTTTCAAGGTATTCAAATTCCTGAGTTCTTCGGACGGCTTGAAAGTTTGAGGTATCTCAATATCTCATCTGCGTCGTTTGGGGGGGTGATTCCTTCTTCCCTTGGTAACTTGTCATACTTGAACTATCTTGACCTTCGTTCTGATGTCTCCTTATTGGAAATACCTTCCAGAAACTTGAATTGGCTTTCTCATCTCTCTTCCCTGAAATACCTTAATCTCGGAGGCATCGACCTTGGCGGCACAAAAGTAAGTTGGATGCATGCTGTTAACATGCTTCCATCCTTACTAGAGTTGCACTTATCTTCATGTCATATTGTAATTGAAAGCCTTCCACTCTCACTGCAAAGGATCAACTTCACGTCACTTTTGGTCCTTGATTTGTCATGGAACCATATAAATAATTCTTCATTTCCCAACTGGCTTTTTAATCTTACTAGCCTCAGAAAACTTGATCTACGCTCGAATTCCTTCAGTGGTCCTTTTCCAAGTGAACTTGCAGGCCTCAAATCTTTAGAATATCTTGATTTATCTAACATGGGATTTAAAGGTCTCATTCCCAAGGGCATTGGAAATATGTGCAAGCTAAAGATCTTAAATCTTATGGAGAACTTACTTGATGGGGGGATGGAAGCGTTTTTGAGGAGTTTCTCAGATTGTCCGAATAATACATTAGAGTCACTGGATTTGTCTTTTAATTCGTTCACAAGCCAATTGCCGGCCTCCTTAGGAATATTAAAAAATCTGCGATATCTTAACCTTGGGAACAACTACTTTTGGGGCTCAATTCCTAAATCTATTGGAAACTTGTCGTTGTTGAAAACATTGGACCTGTCTTATAATCATATGAACGGGTCCATTCCAGAAAGTTTGGGACAACTCTCCGAGCTGGTTGATCTTTATCTGACTGCAAATTCATGGGCAGGCATGCTAACAGAATCCCATATGTTAAATCTCACCAGATTAAAATATGTTTCGATATACAGCGAGGAGCCCATGTCCCTCATTTTCAACGTGTCTTCTGAGTGGGTTCCTCCTTTCAAGCTCCACACAATTCTGATTAACTACTGTCGAGTAGGCCCTGCCTTTTCTGTTTGGCTTCAGTCTCAAACTGAGCTCATTGATGTCACCATTAGTAGAGCCGGATTCTCAGATTCCATACCAGAGGAGTGGTTCATGAAGATATCTTCGCAAGTTAAATCTCTGGATTTATCTTACAACCAATTCAAGGGAAGGCTTCCATTCCAACTGAAGTTTCCAGAGTTAAAATCTATAAATTTGGGTCATAACCAGTTTGATGGTCTACTACCACTTTGGTCCACTAATGCGACCGTCATTGATCTTGAAAGCAATTTGTTATCCGGGAAAATTCCCTCAAACATTGACGAATTGATGCCCAATTTGCGACAATTGTGTCTGTCGGAGAATCATTTGACAGGTATTATTCCACCCTCTATATGCAAAATCCACCATCTGATGGTCCTGTCGCTAAGAAGAAATTGGTTATATGGAGAATTCCCTCATGAGTGGAGTTTGTGGAGCATAATAACTGTTGTCGATGTTGCATACAACAATCTCTCTGGTAATGTTCCGACTTCAGTGGGTATCCCAAGGTCTCTTCAAGTTTTAAAGATGAACGACAACAAGTTCACCGGCGAAATTCCTTTTTCCTTGAACAATTGTTCTACTTTGAGGCGGCTTGATCTGGGAGGGAACAAATTCACGGGAAACCTGCCCTTATGGATTGGATCAAATGTATCAACATTGCAACTGTTACAATTGGGATCCAATCTTTTGAGCGGACAGATTCCCCAACAATTCTGCAGTCTCATCTACCTTCACATCCTCGACCTTGGTCACAACAACATTTCAGGTAGCATTCCAAAGTGTTTGAATAATATGACTTCTCTAGTGGATTCTGCTTCTCTAGGCGGTAATGATTCCAGTGAATGGTACCTCTATCGATATATATATGATGCGCAAACAACAGTCACATCAAAAGGGAGAGAACTCGACTATGGACGCAGCCAAATGCAATATGTAAAGAGCGTTGATCTTTCGTCAAATAATTTACAAGGTGAAATCCCCGAAGAAGTAAGCAGTCTCATTGAATTGGGCACCTTGAACTTGTCGATGAACCAATTAAGTGGAAAGATTCCCTCGAAGATTGGAAACTTGCGTTTGCTGGAAAATCTTGATCTCTCGCTCAACCACCTTTCAGGACATATTCCTCAAAGCCTTTCTTCTCTTACCTTCCTGTCTCACTTGAACTTGTCCTACAACAACTTGACAGGAAGAATTCCTACAGGCAACCAGCTACAAACGCTGGTTGACAAATCCATTTACGAGGGAAATCCATCATTGTGCGGTGCTCCTCTTTCAACTTCTTGCCCTGGAGATGAGACGCCTACAAGACAACCTTTGCATGTAGAAGACAACACAGATAAAGAAGAAAGGCTTTGGTTGTATGTCAGTGTGATACTCGGCTTTGTCGTAGGCTTCTGGGGAGTTTGTGGCACTTTAATAATAAAGAAGTCATGGAGGTATGCCTATTTTAGATTCTTCGACAACATCAAAGACAAGGCAGCCCTAGCAATTGCACTCAAAGCGGCTCGTTGGAGAAGGAGATGGGAAAAATAA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0000003 GO:0003006 GO:0005575 GO:0005618 GO:0005623 GO:0007275 GO:0007389 GO:0008150 GO:0009505 GO:0009531 GO:0009553 GO:0009653 GO:0009790 GO:0009791 GO:0009793 GO:0009798 GO:0009888 GO:0010154 GO:0010453 GO:0022414 GO:0022603 GO:0030312 GO:0032501 GO:0032502 GO:0042659 GO:0044426 GO:0044462 GO:0044464 GO:0045595 GO:0048226 GO:0048229 GO:0048316 GO:0048608 GO:0048731 GO:0048856 GO:0050789 GO:0050793 GO:0050794 GO:0051239 GO:0051302 GO:0061458 GO:0065001 GO:0065007 GO:0071944 GO:0090558 GO:0090708 GO:0099402 GO:1905392 GO:1905421 GO:2000026 GO:2000067 GO:2000280

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

LRRNT_2 LRR_1 LRR_6 LRR_8

Protein Analysis

1028

Amino Acids

115.19

Weight (kDa)

6.26

Isoelectric Point (pI)

43.13

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
LRRNT_2	PF08263	53 - 90	8.3e-13	Leucine rich repeat N-terminal domain
LRR_14	PF23598	134 - 248	1.2e-06	Leucine-rich repeat region
LRR_8	PF13855	139 - 196	2.2e-06	Leucine rich repeat
LRR_14	PF23598	261 - 350	1.8e-06	Leucine-rich repeat region
LRR_14	PF23598	373 - 515	4.3e-12	Leucine-rich repeat region
LRR_8	PF13855	396 - 453	7.9e-07	Leucine rich repeat
LRR_14	PF23598	824 - 918	7.9e-06	Leucine-rich repeat region

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

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Publication-ready

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Orthologous Genes (Group: OG0000048)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT2G34930
fragaria_vesca	FvH4_3g12670 FvH4_3g12672 FvH4_3g12740 FvH4_3g12742 FvH4_3g12770 FvH4_3g12770 FvH4_3g12860 FvH4_3g12890 FvH4_3g13431 FvH4_3g13433 FvH4_3g13435 FvH4_3g13470 FvH4_3g13470 FvH4_3g13480 FvH4_3g13562 FvH4_3g13580 FvH4_3g13600 FvH4_3g13600 FvH4_3g13600 FvH4_3g13600 FvH4_3g13600 FvH4_3g13600 FvH4_3g13610 FvH4_3g13620 FvH4_3g13620 FvH4_3g23240 FvH4_3g32910 FvH4_3g35070 FvH4_3g45520 FvH4_5g08430 FvH4_5g08450 FvH4_6g53230 FvH4_6g53300
malus_domestica	MD05G1217600.v1.1 MD05G1217700.v1.1 MD05G1224700.v1.1 MD05G1225100.v1.1 MD05G1225300.v1.1 MD05G1225400.v1.1 MD05G1235900.v1.1 MD05G1236100.v1.1 MD05G1236300.v1.1 MD05G1237200.v1.1 MD05G1241600.v1.1 MD05G1245700.v1.1 MD05G1245800.v1.1 MD05G1245900.v1.1 MD05G1246000.v1.1 MD05G1246100.v1.1 MD05G1246300.v1.1 MD05G1246400.v1.1 MD05G1246500.v1.1 MD05G1248100.v1.1 MD05G1248200.v1.1 MD05G1264300.v1.1 MD05G1275900.v1.1 MD07G1051400.v1.1 MD09G1012600.v1.1 MD09G1012700.v1.1 MD09G1012800.v1.1 MD10G1221400.v1.1 MD10G1221500.v1.1 MD10G1221600.v1.1 MD10G1221900.v1.1 MD10G1222200.v1.1 MD10G1222400.v1.1 MD10G1222500.v1.1 MD10G1222900.v1.1 MD10G1223000.v1.1 MD10G1223100.v1.1 MD10G1223500.v1.1 MD10G1228000.v1.1 MD12G1019600.v1.1 MD12G1020000.v1.1 MD12G1020100.v1.1 MD17G1013200.v1.1 MD17G1013300.v1.1 MD17G1013400.v1.1
prunus_persica	Prupe.1G060500_v2.0.a1 Prupe.1G100100_v2.0.a1 Prupe.3G124000_v2.0.a1 Prupe.3G304400_v2.0.a1 Prupe.4G116800_v2.0.a1 Prupe.4G116900_v2.0.a1 Prupe.4G117000_v2.0.a1 Prupe.4G121800_v2.0.a1 Prupe.4G121900_v2.0.a1 Prupe.4G122000_v2.0.a1 Prupe.4G122100_v2.0.a1 Prupe.4G122200_v2.0.a1 Prupe.4G122300_v2.0.a1 Prupe.4G122500_v2.0.a1 Prupe.4G122600_v2.0.a1 Prupe.4G122800_v2.0.a1 Prupe.4G122900_v2.0.a1 Prupe.4G123000_v2.0.a1 Prupe.4G123100_v2.0.a1 Prupe.4G123200_v2.0.a1 Prupe.4G131500_v2.0.a1 Prupe.4G131600_v2.0.a1 Prupe.7G032500_v2.0.a1 Prupe.7G032900_v2.0.a1 Prupe.7G033000_v2.0.a1 Prupe.7G033100_v2.0.a1 Prupe.7G033300_v2.0.a1 Prupe.7G033600_v2.0.a1 Prupe.7G034600_v2.0.a1 Prupe.7G040200_v2.0.a1 Prupe.7G059200_v2.0.a1
pyrus_communis	pycom05g20580 pycom05g20590 pycom05g20760 pycom05g20800 pycom05g21280 pycom05g21290 pycom05g21820 pycom05g21830 pycom05g22180 pycom05g22190 pycom05g22210 pycom05g22450 pycom05g22460 pycom05g22470 pycom05g22480 pycom05g22490 pycom05g23770 pycom05g23780 pycom05g24050 pycom05g24060 pycom07g03910 pycom10g18700 pycom10g18720 pycom10g18730 pycom10g18740 pycom10g19150 pycom111g01060 pycom12g01660 pycom12g01690 pycom12g01720 pycom12g01740 pycom12g01750 pycom12g01770 pycom12g01810 pycom12g01820 pycom12g01830 pycom12g01840 pycom12g01870 pycom12g01900 pycom17g01060 pycom17g01070
rosa_chinensis	RchiOBHm_Chr1g0315041 RchiOBHm_Chr1g0315051 RchiOBHm_Chr1g0315071 RchiOBHm_Chr1g0315161 RchiOBHm_Chr1g0315211 RchiOBHm_Chr1g0315251 RchiOBHm_Chr1g0315321 RchiOBHm_Chr1g0315391 RchiOBHm_Chr1g0315451 RchiOBHm_Chr1g0315481 RchiOBHm_Chr1g0315551 RchiOBHm_Chr1g0315601 RchiOBHm_Chr1g0315621 RchiOBHm_Chr1g0359221 RchiOBHm_Chr2g0142981 RchiOBHm_Chr2g0143001 RchiOBHm_Chr2g0143061 RchiOBHm_Chr2g0143091 RchiOBHm_Chr2g0175321 RchiOBHm_Chr2g0175341 RchiOBHm_Chr2g0175361 RchiOBHm_Chr2g0175371 RchiOBHm_Chr3g0470491 RchiOBHm_Chr3g0480881 RchiOBHm_Chr3g0485511 RchiOBHm_Chr5g0020741 RchiOBHm_Chr5g0020901 RchiOBHm_Chr5g0020931 RchiOBHm_Chr5g0020941 RchiOBHm_Chr5g0020961 RchiOBHm_Chr5g0020971 RchiOBHm_Chr5g0021451 RchiOBHm_Chr5g0021531 RchiOBHm_Chr5g0021831 RchiOBHm_Chr5g0021841 RchiOBHm_Chr5g0021931 RchiOBHm_Chr5g0021941 RchiOBHm_Chr5g0021981 RchiOBHm_Chr5g0021991 RchiOBHm_Chr5g0022011 RchiOBHm_Chr5g0022181 RchiOBHm_Chr5g0022191 RchiOBHm_Chr5g0022211 RchiOBHm_Chr5g0022221 RchiOBHm_Chr5g0022231 RchiOBHm_Chr5g0022291 RchiOBHm_Chr5g0022301 RchiOBHm_Chr5g0022331 RchiOBHm_Chr5g0022361 RchiOBHm_Chr5g0022371 RchiOBHm_Chr5g0022381 RchiOBHm_Chr5g0022401 RchiOBHm_Chr5g0022431 RchiOBHm_Chr5g0022451 RchiOBHm_Chr5g0022541 RchiOBHm_Chr5g0022591 RchiOBHm_Chr5g0022601 RchiOBHm_Chr5g0022701 RchiOBHm_Chr5g0022741 RchiOBHm_Chr5g0022791 RchiOBHm_Chr5g0022811 RchiOBHm_Chr5g0022851 RchiOBHm_Chr5g0029441 RchiOBHm_Chr5g0041631 RchiOBHm_Chr5g0069391 RchiOBHm_Chr6g0273811 RchiOBHm_Chr6g0273831 RchiOBHm_Chr6g0275331 RchiOBHm_Chr7g0219061
rosa_laevigata	RLG00000002463 RLG00000020007 RLG00000020008 RLG00000022320 RLG00000022321 RLG00000023446 RLG00000030742 RLG00000030743 RLG00000030747 RLG00000032557 RLG00000032564 RLG00000032571 RLG00000032573 RLG00000032574 RLG00000032612 RLG00000032633 RLG00000032636 RLG00000032638 RLG00000032650 RLG00000032651 RLG00000032652 RLG00000032653 RLG00000032655 RLG00000032673 RLG00000032678 RLG00000032769 RLG00000032857 RLG00000033168 RLG00000033465 RLG00000034086 RLG00000034222 RLG00000035290
rosa_multiflora	Rmu_co8143358.1_g000001 Rmu_co8518791.1_g000001 Rmu_sc0000178.1_g000008 Rmu_sc0000178.1_g000014 Rmu_sc0000401.1_g000005 Rmu_sc0000401.1_g000013 Rmu_sc0000401.1_g000017 Rmu_sc0000401.1_g000018 Rmu_sc0000401.1_g000024 Rmu_sc0000401.1_g000025 Rmu_sc0000576.1_g000020 Rmu_sc0001585.1_g000003 Rmu_sc0001585.1_g000005 Rmu_sc0001585.1_g000008 Rmu_sc0001784.1_g000006 Rmu_sc0001784.1_g000011 Rmu_sc0001784.1_g000022 Rmu_sc0001784.1_g000028 Rmu_sc0002052.1_g000004 Rmu_sc0002052.1_g000011 Rmu_sc0002277.1_g000003 Rmu_sc0002277.1_g000006 Rmu_sc0002277.1_g000024 Rmu_sc0002658.1_g000012 Rmu_sc0003512.1_g000004 Rmu_sc0003512.1_g000007 Rmu_sc0004180.1_g000016 Rmu_sc0004180.1_g000029 Rmu_sc0004180.1_g000034 Rmu_sc0005639.1_g000008 Rmu_sc0005639.1_g000023 Rmu_sc0006070.1_g000016 Rmu_sc0006070.1_g000017 Rmu_sc0006966.1_g000021 Rmu_sc0006966.1_g000023 Rmu_sc0007239.1_g000003 Rmu_sc0008460.1_g000010 Rmu_sc0009984.1_g000008 Rmu_sc0010181.1_g000005 Rmu_sc0010181.1_g000010 Rmu_sc0010503.1_g000006 Rmu_sc0011646.1_g000003 Rmu_sc0012984.1_g000011 Rmu_sc0016972.1_g000005 Rmu_sc0016972.1_g000008 Rmu_sc0023070.1_g000003 Rmu_sc0025660.1_g000001 Rmu_ssc0000322.1_g000019
rosa_roxburghii	Rroxscaffold_1G00038860 Rroxscaffold_1G00053490 Rroxscaffold_1G00053500 Rroxscaffold_1G00054230 Rroxscaffold_1G00056460 Rroxscaffold_1G00056470 Rroxscaffold_1G00056480 Rroxscaffold_1G00056500 Rroxscaffold_1G00056510 Rroxscaffold_1G00056620 Rroxscaffold_1G00056690 Rroxscaffold_1G00056710 Rroxscaffold_1G00056720 Rroxscaffold_1G00056730 Rroxscaffold_1G00056740 Rroxscaffold_1G00056750 Rroxscaffold_1G00056760 Rroxscaffold_1G00056870 Rroxscaffold_1G00056900 Rroxscaffold_1G00057120 Rroxscaffold_1G00057560 Rroxscaffold_2G00077430 Rroxscaffold_2G00102160 Rroxscaffold_3G00231420 Rroxscaffold_3G00231430 Rroxscaffold_4G00297230 Rroxscaffold_4G00331570 Rroxscaffold_6G00396700 Rroxscaffold_6G00400940 Rroxscaffold_7G00192740
rosa_rugosa	Rorug01G0004400 Rorug01G0004500 Rorug02G0377600 Rorug02G0378000 Rorug02G0582800 Rorug02G0583400 Rorug03G0187000 Rorug03G0218800 Rorug04G0081200 Rorug05G0062700 Rorug05G0062700 Rorug05G0063100 Rorug05G0063200 Rorug05G0063200 Rorug05G0063200 Rorug05G0067000 Rorug05G0069700 Rorug05G0069900 Rorug05G0070000 Rorug05G0070100 Rorug05G0070300 Rorug05G0070400 Rorug05G0070600 Rorug05G0070600 Rorug05G0072300 Rorug05G0072400 Rorug05G0072500 Rorug05G0072500 Rorug05G0072600.1 Rorug05G0072700 Rorug05G0072800 Rorug05G0072800 Rorug05G0072900 Rorug05G0073000 Rorug05G0073000 Rorug05G0073400 Rorug05G0073400 Rorug05G0073400 Rorug05G0074800 Rorug05G0075000 Rorug05G0114300 Rorug05G0194200 Rorug06G0097800
rosa_samantha	Rh2AG401400 Rh2CG387600 Rh2CG417000 Rh2CG637400 Rh5CG169600 Rh5CG172100 Rh5CG175200 Rh5CG317100 Rh6DG187900
rosa_wichuraiana	Rw1G000750 Rw1G000790 Rw1G000820 Rw1G000860 Rw1G000880 Rw1G000910 Rw2G035180 Rw2G035200 Rw2G035240 Rw2G054370 Rw2G054380 Rw5G013570 Rw5G013580 Rw5G013590 Rw5G013910 Rw5G013980 Rw5G014110 Rw5G014120 Rw5G014280 Rw5G014310 Rw5G014400 Rw5G014420 Rw5G014440 Rw5G014460 Rw5G014480 Rw5G014500 Rw5G014520 Rw5G014530 Rw5G042390

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AanI	TTATAA	1 cut(s)	1284
AasI	GACNNNNNNGTC	1 cut(s)	1857
Acc16I	TGCGCA	1 cut(s)	2424
Acc36I	ACCTGC	1 cut(s)	2184
Acc65I	GGTACC	1 cut(s)	2397
AccB1I	GGYRCC	2 cut(s)	2397, 2561
AccB7I	CCANNNNNTGG	2 cut(s)	1921, 2394
AccBSI	CCGCTC	1 cut(s)	2244
AccI	GTMKAC	1 cut(s)	1747
AccIII	TCCGGA	1 cut(s)	303
AciI	CCGC	6 cut(s)	684, 2140, 2244, 2376, 2811, 3053
AclI	AACGTT	1 cut(s)	367
AclWI	GGATC	5 cut(s)	197, 803, 2200, 2223, 2236
AcsI	RAATTY	9 cut(s)	462, 910, 1357, 1720, 1812, 1958, 2103, 2162, 2742
AcuI	CTGAAG	4 cut(s)	901, 1529, 1715, 2025
AcyI	GRCGYC	1 cut(s)	2849
AfaI	GTAC	1 cut(s)	2399
AfiI	CCNNNNNNNGG	5 cut(s)	213, 1162, 1672, 1921, 2394
AflIII	ACRYGT	1 cut(s)	1458
AjiI	CACGTC	2 cut(s)	170, 807
AjnI	CCWGG	1 cut(s)	2836
AjuI	GAANNNNNNNTTGG	4 cut(s)	610, 642, 1683, 1715
AluBI	AGCT	8 cut(s)	295, 355, 438, 1030, 1333, 1489, 1561, 2761
AluI	AGCT	8 cut(s)	295, 355, 438, 1030, 1333, 1489, 1561, 2761
Alw21I	GWGCWC	2 cut(s)	1563, 2818
Alw26I	GTCTC	9 cut(s)	160, 598, 1001, 1554, 2064, 2276, 2552, 2709, 2840
AlwI	GGATC	5 cut(s)	197, 803, 2200, 2223, 2236
Aor13HI	TCCGGA	1 cut(s)	303
AoxI	GGCC	3 cut(s)	946, 1164, 1522
ApeKI	GCWGC	2 cut(s)	2469, 3029
ApoI	RAATTY	9 cut(s)	462, 910, 1357, 1720, 1812, 1958, 2103, 2162, 2742
Asp700I	GAANNNNTTC	3 cut(s)	774, 914, 2162
Asp718I	GGTACC	1 cut(s)	2397
AspLEI	GCGC	2 cut(s)	175, 2425
AspS9I	GGNCC	8 cut(s)	298, 817, 923, 1273, 1299, 1523, 1761, 1924
AsuC2I	CCSGG	2 cut(s)	132, 1807
AsuHPI	GGTGA	9 cut(s)	35, 131, 190, 344, 544, 1393, 1564, 2086, 2534
AvaII	GGWCC	7 cut(s)	298, 817, 923, 1273, 1299, 1761, 1924
AxyI	CCTNAGG	1 cut(s)	1171
BaeGI	GKGCMC	1 cut(s)	2564
BamHI	GGATCC	1 cut(s)	2228
BanI	GGYRCC	2 cut(s)	2397, 2561
BanII	GRGCYC	3 cut(s)	1229, 1440, 1563
BarI	GAAGNNNNNNTAC	2 cut(s)	2731, 2763
BbsI	GAAGAC	2 cut(s)	1455, 2883
Bbv12I	GWGCWC	2 cut(s)	1563, 2818
BbvI	GCAGC	2 cut(s)	2481, 3041
BccI	CCATC	9 cut(s)	116, 733, 1058, 1066, 1736, 1915, 1923, 2809, 3066
BceAI	ACGGC	1 cut(s)	497
BciT130I	CCWGG	1 cut(s)	2838
BciVI	GTATCC	1 cut(s)	2060
BcnI	CCSGG	2 cut(s)	132, 1807
BcoDI	GTCTC	9 cut(s)	160, 598, 1001, 1554, 2064, 2276, 2552, 2709, 2840
BfaI	CTAG	7 cut(s)	95, 428, 734, 882, 2354, 2372, 3035
BfmI	CTRYAG	2 cut(s)	2266, 2748
BfuAI	ACCTGC	1 cut(s)	2184
BfuI	GTATCC	1 cut(s)	2060
BglII	AGATCT	3 cut(s)	193, 430, 1035
BisI	GCNGC	5 cut(s)	685, 2141, 2470, 3030, 3054
BlsI	GCNGC	5 cut(s)	686, 2142, 2471, 3031, 3055
Bme1390I	CCNGG	3 cut(s)	132, 1807, 2838
Bme18I	GGWCC	7 cut(s)	298, 817, 923, 1273, 1299, 1761, 1924
BmgBI	CACGTC	2 cut(s)	170, 807
BmgT120I	GGNCC	8 cut(s)	298, 817, 923, 1273, 1299, 1523, 1761, 1924
BmiI	GGNNCC	7 cut(s)	836, 1300, 1437, 1476, 2230, 2399, 2563
BmrFI	CCNGG	3 cut(s)	132, 1807, 2838
BmrI	ACTGGG	1 cut(s)	355
BmsI	GCATC	4 cut(s)	681, 693, 1827, 2410
BmuI	ACTGGG	1 cut(s)	355
BoxI	GACNNNNGTC	1 cut(s)	2298
BpiI	GAAGAC	2 cut(s)	1455, 2883
BpmI	CTGGAG	1 cut(s)	2859
Bpu10I	CCTNAGC	1 cut(s)	376
BpuMI	CCSGG	2 cut(s)	132, 1807
Bsa29I	ATCGAT	1 cut(s)	2407
BsaBI	GATNNNNATC	1 cut(s)	1344
BsaHI	GRCGYC	1 cut(s)	2849
BsaI	GGTCTC	2 cut(s)	1001, 2064
BsaJI	CCNNGG	7 cut(s)	547, 679, 1005, 1204, 2054, 2296, 2836
BsaWI	WCCGGW	1 cut(s)	303
BsaXI	ACNNNNNCTCC	2 cut(s)	1427, 1457
Bsc4I	CCNNNNNNNGG	5 cut(s)	213, 1162, 1672, 1921, 2394
Bse118I	RCCGGY	2 cut(s)	1162, 2096
Bse1I	ACTGG	6 cut(s)	334, 350, 869, 1131, 1735, 2388
Bse21I	CCTNAGG	1 cut(s)	1171
Bse3DI	GCAATG	2 cut(s)	241, 2207
Bse8I	GATNNNNATC	1 cut(s)	1344
BseAI	TCCGGA	1 cut(s)	303
BseBI	CCWGG	1 cut(s)	2838
BseCI	ATCGAT	1 cut(s)	2407
BseDI	CCNNGG	7 cut(s)	547, 679, 1005, 1204, 2054, 2296, 2836
BseGI	GGATG	6 cut(s)	13, 163, 708, 725, 1077, 2286
BseJI	GATNNNNATC	1 cut(s)	1344
BseLI	CCNNNNNNNGG	5 cut(s)	213, 1162, 1672, 1921, 2394
BseMI	GCAATG	2 cut(s)	241, 2207
BseMII	CTCAG	6 cut(s)	459, 901, 1110, 1458, 1548, 1608
BseNI	ACTGG	6 cut(s)	334, 350, 869, 1131, 1735, 2388
BseRI	GAGGAG	4 cut(s)	1102, 1448, 1625, 2808
BseSI	GKGCMC	1 cut(s)	2564
BseXI	GCAGC	2 cut(s)	2481, 3041
Bsh1285I	CGRYCG	1 cut(s)	1776
BshFI	GGCC	3 cut(s)	948, 1166, 1524
BshNI	GGYRCC	2 cut(s)	2397, 2561
BshVI	ATCGAT	1 cut(s)	2407
BsiEI	CGRYCG	1 cut(s)	1776
BsiHKAI	GWGCWC	2 cut(s)	1563, 2818
BsiSI	CCGG	6 cut(s)	131, 304, 1163, 1587, 1806, 2097
BslFI	GGGAC	3 cut(s)	362, 1332, 1429
BslI	CCNNNNNNNGG	5 cut(s)	213, 1162, 1672, 1921, 2394
BsmAI	GTCTC	9 cut(s)	160, 598, 1001, 1554, 2064, 2276, 2552, 2709, 2840
BsmBI	CGTCTC	2 cut(s)	160, 2840
BsmFI	GGGAC	3 cut(s)	362, 1332, 1429
BsmI	GAATGC	1 cut(s)	2322
BsnI	GGCC	3 cut(s)	948, 1166, 1524
Bso31I	GGTCTC	2 cut(s)	1001, 2064
Bsp1286I	GDGCHC	5 cut(s)	1229, 1440, 1563, 2564, 2818
Bsp13I	TCCGGA	1 cut(s)	303
BspACI	CCGC	6 cut(s)	684, 2140, 2244, 2376, 2811, 3053
BspANI	GGCC	3 cut(s)	948, 1166, 1524
BspCNI	CTCAG	6 cut(s)	460, 900, 1109, 1459, 1549, 1607
BspDI	ATCGAT	1 cut(s)	2407
BspEI	TCCGGA	1 cut(s)	303
BspHI	TCATGA	2 cut(s)	1620, 1966
BspLI	GGNNCC	7 cut(s)	836, 1300, 1437, 1476, 2230, 2399, 2563
BspMAI	CTGCAG	1 cut(s)	2270
BspMI	ACCTGC	1 cut(s)	2184
BspPI	GGATC	5 cut(s)	197, 803, 2200, 2223, 2236
BspQI	GCTCTTC	1 cut(s)	74
BspT107I	GGYRCC	2 cut(s)	2397, 2561
BspTNI	GGTCTC	2 cut(s)	1001, 2064
BsrBI	CCGCTC	1 cut(s)	2244
BsrDI	GCAATG	2 cut(s)	241, 2207
BsrFI	RCCGGY	2 cut(s)	1162, 2096
BsrI	ACTGG	6 cut(s)	334, 350, 869, 1131, 1735, 2388
BssAI	RCCGGY	2 cut(s)	1162, 2096
BssECI	CCNNGG	7 cut(s)	547, 679, 1005, 1204, 2054, 2296, 2836
BssNI	GRCGYC	1 cut(s)	2849
BssT1I	CCWWGG	6 cut(s)	547, 679, 1005, 1204, 2054, 2296
Bst2UI	CCWGG	1 cut(s)	2838
Bst4CI	ACNGT	6 cut(s)	142, 1514, 1777, 1996, 2217, 2434
Bst6I	CTCTTC	4 cut(s)	74, 156, 649, 2067
BstACI	GRCGYC	1 cut(s)	2849
BstC8I	GCNNGC	8 cut(s)	215, 357, 708, 946, 1028, 1164, 1369, 1373
BstENI	CCTNNNNNAGG	1 cut(s)	211
BstF5I	GGATG	6 cut(s)	13, 163, 708, 725, 1077, 2286
BstHHI	GCGC	2 cut(s)	175, 2425
BstMAI	GTCTC	9 cut(s)	160, 598, 1001, 1554, 2064, 2276, 2552, 2709, 2840
BstMCI	CGRYCG	1 cut(s)	1776
BstMWI	GCNNNNNNNGC	5 cut(s)	17, 1846, 2767, 3035, 3050
BstNI	CCWGG	1 cut(s)	2838
BstNSI	RCATGY	4 cut(s)	710, 721, 1375, 2873
BstPAI	GACNNNNGTC	1 cut(s)	2298
BstSCI	CCNGG	3 cut(s)	130, 1805, 2836
BstSFI	CTRYAG	2 cut(s)	2266, 2748
BstSLI	GKGCMC	1 cut(s)	2564
BstV1I	GCAGC	2 cut(s)	2481, 3041
BstV2I	GAAGAC	2 cut(s)	1455, 2883
BstX2I	RGATCY	4 cut(s)	193, 430, 1035, 2228
BstXI	CCANNNNNNTGG	3 cut(s)	1614, 1742, 2591
BstYI	RGATCY	4 cut(s)	193, 430, 1035, 2228
Bsu15I	ATCGAT	1 cut(s)	2407
Bsu36I	CCTNAGG	1 cut(s)	1171
BsuI	GTATCC	1 cut(s)	2060
BsuRI	GGCC	3 cut(s)	948, 1166, 1524
BsuTUI	ATCGAT	1 cut(s)	2407
BtrI	CACGTC	2 cut(s)	170, 807
BtsCI	GGATG	6 cut(s)	13, 163, 708, 725, 1077, 2286
BtsI	GCAGTG	2 cut(s)	99, 785
BtsIMutI	CAGTG	8 cut(s)	99, 327, 785, 925, 1124, 2049, 2395, 2923
BveI	ACCTGC	1 cut(s)	2184
Cac8I	GCNNGC	8 cut(s)	215, 357, 708, 946, 1028, 1164, 1369, 1373
CciI	TCATGA	2 cut(s)	1620, 1966
CfoI	GCGC	2 cut(s)	175, 2425
Cfr10I	RCCGGY	2 cut(s)	1162, 2096
Cfr13I	GGNCC	8 cut(s)	298, 817, 923, 1273, 1299, 1523, 1761, 1924
ClaI	ATCGAT	1 cut(s)	2407
CseI	GACGC	3 cut(s)	507, 2475, 2857
Csp6I	GTAC	1 cut(s)	2398
CviQI	GTAC	1 cut(s)	2398
DraI	TTTAAA	3 cut(s)	420, 991, 2073
DrdI	GACNNNNNNGTC	1 cut(s)	1857
DseDI	GACNNNNNNGTC	1 cut(s)	1857
Eam1104I	CTCTTC	4 cut(s)	74, 156, 649, 2067
EarI	CTCTTC	4 cut(s)	74, 156, 649, 2067
Ecl136II	GAGCTC	1 cut(s)	1561
Eco130I	CCWWGG	6 cut(s)	547, 679, 1005, 1204, 2054, 2296
Eco147I	AGGCCT	1 cut(s)	948
Eco24I	GRGCYC	3 cut(s)	1229, 1440, 1563
Eco31I	GGTCTC	2 cut(s)	1001, 2064
Eco32I	GATATC	2 cut(s)	1196, 1629
Eco47I	GGWCC	7 cut(s)	298, 817, 923, 1273, 1299, 1761, 1924
Eco53kI	GAGCTC	1 cut(s)	1561
Eco57I	CTGAAG	4 cut(s)	901, 1529, 1715, 2025
Eco81I	CCTNAGG	1 cut(s)	1171
EcoICRI	GAGCTC	1 cut(s)	1561
EcoNI	CCTNNNNNAGG	1 cut(s)	211
EcoO109I	RGGNCCY	1 cut(s)	1523
EcoRI	GAATTC	3 cut(s)	910, 1958, 2742
EcoRII	CCWGG	1 cut(s)	2836
EcoRV	GATATC	2 cut(s)	1196, 1629
EcoT14I	CCWWGG	6 cut(s)	547, 679, 1005, 1204, 2054, 2296
EcoT22I	ATGCAT	1 cut(s)	708
EcoT38I	GRGCYC	3 cut(s)	1229, 1440, 1563
ErhI	CCWWGG	6 cut(s)	547, 679, 1005, 1204, 2054, 2296
Esp3I	CGTCTC	2 cut(s)	160, 2840
FalI	AAGNNNNNCTT	6 cut(s)	2671, 2703, 2848, 2880, 2886, 2918
FaqI	GGGAC	3 cut(s)	362, 1332, 1429
FauNDI	CATATG	2 cut(s)	1290, 1389
FblI	GTMKAC	1 cut(s)	1747
Fnu4HI	GCNGC	5 cut(s)	685, 2141, 2470, 3030, 3054
FokI	GGATG	6 cut(s)	20, 170, 712, 715, 1084, 2273
FriOI	GRGCYC	3 cut(s)	1229, 1440, 1563
Fsp4HI	GCNGC	5 cut(s)	685, 2141, 2470, 3030, 3054
FspBI	CTAG	7 cut(s)	95, 428, 734, 882, 2354, 2372, 3035
FspI	TGCGCA	1 cut(s)	2424
GlaI	GCGC	2 cut(s)	174, 2424
GluI	GCNGC	5 cut(s)	685, 2141, 2470, 3030, 3054
GsuI	CTGGAG	1 cut(s)	2859
HaeIII	GGCC	3 cut(s)	948, 1166, 1524
HapII	CCGG	6 cut(s)	131, 304, 1163, 1587, 1806, 2097
HgaI	GACGC	3 cut(s)	507, 2475, 2857
HhaI	GCGC	2 cut(s)	175, 2425
Hin1I	GRCGYC	1 cut(s)	2849
Hin6I	GCGC	2 cut(s)	173, 2423
HinP1I	GCGC	2 cut(s)	173, 2423
HincII	GTYRAC	2 cut(s)	715, 2776
HindII	GTYRAC	2 cut(s)	715, 2776
HpaI	GTTAAC	1 cut(s)	715
HpaII	CCGG	6 cut(s)	131, 304, 1163, 1587, 1806, 2097
HphI	GGTGA	9 cut(s)	35, 131, 190, 344, 544, 1393, 1564, 2086, 2534
Hpy166II	GTNNAC	7 cut(s)	715, 938, 1149, 1748, 1764, 2094, 2776
Hpy8I	GTNNAC	7 cut(s)	715, 938, 1149, 1748, 1764, 2094, 2776
Hpy99I	CGWCG	1 cut(s)	523
HpyCH4III	ACNGT	6 cut(s)	142, 1514, 1777, 1996, 2217, 2434
HpyCH4IV	ACGT	4 cut(s)	169, 367, 806, 1458
HpyF10VI	GCNNNNNNNGC	5 cut(s)	17, 1846, 2767, 3035, 3050
HpySE526I	ACGT	4 cut(s)	169, 367, 806, 1458
Hsp92I	GRCGYC	1 cut(s)	2849
HspAI	GCGC	2 cut(s)	173, 2423
Kpn2I	TCCGGA	1 cut(s)	303
KpnI	GGTACC	1 cut(s)	2401
KroI	GCCGGC	1 cut(s)	1162
KroNI	GCCGGC	1 cut(s)	1164
KspAI	GTTAAC	1 cut(s)	715
LguI	GCTCTTC	1 cut(s)	74
LmnI	GCTCC	5 cut(s)	443, 1435, 1494, 1983, 2821
Lsp1109I	GCAGC	2 cut(s)	2481, 3041
LweI	GCATC	4 cut(s)	681, 693, 1827, 2410
MaeI	CTAG	7 cut(s)	95, 428, 734, 882, 2354, 2372, 3035
MaeII	ACGT	4 cut(s)	169, 367, 806, 1458
MaeIII	GTNAC	7 cut(s)	551, 807, 1122, 1570, 2217, 2300, 2434
MbiI	CCGCTC	1 cut(s)	2244
MfeI	CAATTG	5 cut(s)	1157, 1853, 2122, 2222, 3039
MflI	RGATCY	4 cut(s)	193, 430, 1035, 2228
MhlI	GDGCHC	5 cut(s)	1229, 1440, 1563, 2564, 2818
MlyI	GAGTC	1 cut(s)	1130
MmeI	TCCRAC	6 cut(s)	465, 680, 1714, 1845, 2060, 3041
Mph1103I	ATGCAT	1 cut(s)	708
MroI	TCCGGA	1 cut(s)	303
MroNI	GCCGGC	1 cut(s)	1162
MroXI	GAANNNNTTC	3 cut(s)	774, 914, 2162
MslI	CAYNNNNRTG	2 cut(s)	140, 2806
MspI	CCGG	6 cut(s)	131, 304, 1163, 1587, 1806, 2097
MspR9I	CCNGG	3 cut(s)	132, 1807, 2838
MunI	CAATTG	5 cut(s)	1157, 1853, 2122, 2222, 3039
Mva1269I	GAATGC	1 cut(s)	2322
MvaI	CCWGG	1 cut(s)	2838
MwoI	GCNNNNNNNGC	5 cut(s)	17, 1846, 2767, 3035, 3050
NaeI	GCCGGC	1 cut(s)	1164
NciI	CCSGG	2 cut(s)	132, 1807
NdeI	CATATG	2 cut(s)	1290, 1389
NgoMIV	GCCGGC	1 cut(s)	1162
NlaIV	GGNNCC	7 cut(s)	836, 1300, 1437, 1476, 2230, 2399, 2563
NmeAIII	GCCGAG	1 cut(s)	2907
NmuCI	GTSAC	5 cut(s)	807, 1122, 1570, 2300, 2434
NsbI	TGCGCA	1 cut(s)	2424
NsiI	ATGCAT	1 cut(s)	708
NspI	RCATGY	4 cut(s)	710, 721, 1375, 2873
PaeI	GCATGC	2 cut(s)	710, 1375
PagI	TCATGA	2 cut(s)	1620, 1966
PceI	AGGCCT	1 cut(s)	948
PciSI	GCTCTTC	1 cut(s)	74
PcsI	WCGNNNNNNNCGW	2 cut(s)	672, 2934
PctI	GAATGC	1 cut(s)	2322
PdiI	GCCGGC	1 cut(s)	1164
PdmI	GAANNNNTTC	3 cut(s)	774, 914, 2162
PflMI	CCANNNNNTGG	2 cut(s)	1921, 2394
PfoI	TCCNGGA	1 cut(s)	1805
PkrI	GCNGC	5 cut(s)	686, 2142, 2471, 3031, 3055
PleI	GAGTC	1 cut(s)	1129
PpsI	GAGTC	1 cut(s)	1129
PshAI	GACNNNNGTC	1 cut(s)	2298
PsiI	TTATAA	1 cut(s)	1284
Psp124BI	GAGCTC	1 cut(s)	1563
Psp1406I	AACGTT	1 cut(s)	367
Psp6I	CCWGG	1 cut(s)	2836
PspGI	CCWGG	1 cut(s)	2836
PspN4I	GGNNCC	7 cut(s)	836, 1300, 1437, 1476, 2230, 2399, 2563
PspPI	GGNCC	8 cut(s)	298, 817, 923, 1273, 1299, 1523, 1761, 1924
PsrI	GAACNNNNNNTAC	2 cut(s)	2705, 2737
PstI	CTGCAG	1 cut(s)	2270
PsuI	RGATCY	4 cut(s)	193, 430, 1035, 2228
RsaI	GTAC	1 cut(s)	2399
RsaNI	GTAC	1 cut(s)	2398
RseI	CAYNNNNRTG	2 cut(s)	140, 2806
SacI	GAGCTC	1 cut(s)	1563
SapI	GCTCTTC	1 cut(s)	74
SatI	GCNGC	5 cut(s)	685, 2141, 2470, 3030, 3054
Sau96I	GGNCC	8 cut(s)	298, 817, 923, 1273, 1299, 1523, 1761, 1924
SchI	GAGTC	1 cut(s)	1130
ScrFI	CCNGG	3 cut(s)	132, 1807, 2838
SduI	GDGCHC	5 cut(s)	1229, 1440, 1563, 2564, 2818
SfaNI	GCATC	4 cut(s)	681, 693, 1827, 2410
SfcI	CTRYAG	2 cut(s)	2266, 2748
SgrAI	CRCCGGYG	1 cut(s)	2096
SinI	GGWCC	7 cut(s)	298, 817, 923, 1273, 1299, 1761, 1924
SmiI	ATTTAAAT	1 cut(s)	420
SmiMI	CAYNNNNRTG	2 cut(s)	140, 2806
SphI	GCATGC	2 cut(s)	710, 1375
SseBI	AGGCCT	1 cut(s)	948
SsiI	CCGC	6 cut(s)	684, 2140, 2244, 2376, 2811, 3053
SspI	AATATT	1 cut(s)	1179
SspMI	CTAG	7 cut(s)	95, 428, 734, 882, 2354, 2372, 3035
SstI	GAGCTC	1 cut(s)	1563
StuI	AGGCCT	1 cut(s)	948
StyD4I	CCNGG	3 cut(s)	130, 1805, 2836
StyI	CCWWGG	6 cut(s)	547, 679, 1005, 1204, 2054, 2296
SwaI	ATTTAAAT	1 cut(s)	420
TaaI	ACNGT	6 cut(s)	142, 1514, 1777, 1996, 2217, 2434
TaiI	ACGT	4 cut(s)	172, 370, 809, 1461
TauI	GCSGC	3 cut(s)	687, 2143, 3056
TscAI	CASTG	8 cut(s)	106, 334, 792, 925, 1131, 2049, 2395, 2923
TseFI	GTSAC	5 cut(s)	807, 1122, 1570, 2300, 2434
TseI	GCWGC	2 cut(s)	2469, 3029
Tsp45I	GTSAC	5 cut(s)	807, 1122, 1570, 2300, 2434
TspRI	CASTG	8 cut(s)	106, 334, 792, 925, 1131, 2049, 2395, 2923
Van91I	CCANNNNNTGG	2 cut(s)	1921, 2394
VpaK11BI	GGWCC	7 cut(s)	298, 817, 923, 1273, 1299, 1761, 1924
XagI	CCTNNNNNAGG	1 cut(s)	211
XapI	RAATTY	9 cut(s)	462, 910, 1357, 1720, 1812, 1958, 2103, 2162, 2742
XbaI	TCTAGA	1 cut(s)	94
XceI	RCATGY	4 cut(s)	710, 721, 1375, 2873
XmiI	GTMKAC	1 cut(s)	1747
XmnI	GAANNNNTTC	3 cut(s)	774, 914, 2162
XspI	CTAG	7 cut(s)	95, 428, 734, 882, 2354, 2372, 3035
Zsp2I	ATGCAT	1 cut(s)	708

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.