regulation of response to stimulus
| Domain Name | Pfam ID | Position | E-value | Description |
|---|---|---|---|---|
| LRR_8 | PF13855 | 118 - 176 | 7.2e-06 | Leucine rich repeat |
Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AccI | GTMKAC | 1 cut(s) | 29 |
| AccII | CGCG | 1 cut(s) | 73 |
| AccIII | TCCGGA | 1 cut(s) | 325 |
| AciI | CCGC | 2 cut(s) | 71, 647 |
| AclWI | GGATC | 1 cut(s) | 12 |
| AcoI | YGGCCR | 2 cut(s) | 115, 528 |
| AcsI | RAATTY | 6 cut(s) | 157, 321, 412, 465, 537, 873 |
| AcuI | CTGAAG | 1 cut(s) | 542 |
| AgsI | TTSAA | 4 cut(s) | 154, 364, 520, 850 |
| AjnI | CCWGG | 1 cut(s) | 105 |
| AjuI | GAANNNNNNNTTGG | 2 cut(s) | 403, 435 |
| Alw26I | GTCTC | 1 cut(s) | 257 |
| AlwI | GGATC | 1 cut(s) | 12 |
| Ama87I | CYCGRG | 1 cut(s) | 566 |
| Aor13HI | TCCGGA | 1 cut(s) | 325 |
| AoxI | GGCC | 2 cut(s) | 115, 528 |
| ApoI | RAATTY | 6 cut(s) | 157, 321, 412, 465, 537, 873 |
| AseI | ATTAAT | 1 cut(s) | 767 |
| AspLEI | GCGC | 1 cut(s) | 75 |
| AspS9I | GGNCC | 3 cut(s) | 109, 357, 571 |
| AsuC2I | CCSGG | 1 cut(s) | 633 |
| AvaI | CYCGRG | 1 cut(s) | 566 |
| AvaII | GGWCC | 3 cut(s) | 109, 357, 571 |
| BccI | CCATC | 2 cut(s) | 270, 583 |
| BcgI | CGANNNNNNTGC | 2 cut(s) | 751, 785 |
| BciT130I | CCWGG | 1 cut(s) | 107 |
| BcnI | CCSGG | 1 cut(s) | 633 |
| BcoDI | GTCTC | 1 cut(s) | 257 |
| BfaI | CTAG | 1 cut(s) | 660 |
| Bme1390I | CCNGG | 2 cut(s) | 107, 633 |
| Bme18I | GGWCC | 3 cut(s) | 109, 357, 571 |
| BmeT110I | CYCGRG | 1 cut(s) | 566 |
| BmgT120I | GGNCC | 3 cut(s) | 109, 357, 571 |
| BmiI | GGNNCC | 3 cut(s) | 358, 573, 612 |
| BmrFI | CCNGG | 2 cut(s) | 107, 633 |
| BmsI | GCATC | 1 cut(s) | 655 |
| BpuMI | CCSGG | 1 cut(s) | 633 |
| Bsa29I | ATCGAT | 1 cut(s) | 7 |
| BsaJI | CCNNGG | 1 cut(s) | 112 |
| BsaWI | WCCGGW | 1 cut(s) | 325 |
| Bse3DI | GCAATG | 1 cut(s) | 345 |
| BseAI | TCCGGA | 1 cut(s) | 325 |
| BseBI | CCWGG | 1 cut(s) | 107 |
| BseCI | ATCGAT | 1 cut(s) | 7 |
| BseDI | CCNNGG | 1 cut(s) | 112 |
| BseGI | GGATG | 2 cut(s) | 102, 575 |
| BseMI | GCAATG | 1 cut(s) | 345 |
| Bsh1236I | CGCG | 1 cut(s) | 73 |
| BshFI | GGCC | 2 cut(s) | 117, 530 |
| BshVI | ATCGAT | 1 cut(s) | 7 |
| BsiHKCI | CYCGRG | 1 cut(s) | 566 |
| BsiSI | CCGG | 3 cut(s) | 326, 531, 632 |
| BslFI | GGGAC | 3 cut(s) | 148, 370, 474 |
| BsmAI | GTCTC | 1 cut(s) | 257 |
| BsmFI | GGGAC | 3 cut(s) | 148, 370, 474 |
| BsnI | GGCC | 2 cut(s) | 117, 530 |
| BsoBI | CYCGRG | 1 cut(s) | 566 |
| Bsp13I | TCCGGA | 1 cut(s) | 325 |
| Bsp143I | GATC | 3 cut(s) | 4, 8, 436 |
| BspACI | CCGC | 2 cut(s) | 71, 647 |
| BspANI | GGCC | 2 cut(s) | 117, 530 |
| BspDI | ATCGAT | 1 cut(s) | 7 |
| BspEI | TCCGGA | 1 cut(s) | 325 |
| BspFNI | CGCG | 1 cut(s) | 73 |
| BspLI | GGNNCC | 3 cut(s) | 358, 573, 612 |
| BspPI | GGATC | 1 cut(s) | 12 |
| BsrDI | GCAATG | 1 cut(s) | 345 |
| BssECI | CCNNGG | 1 cut(s) | 112 |
| BssMI | GATC | 3 cut(s) | 4, 8, 436 |
| Bst2UI | CCWGG | 1 cut(s) | 107 |
| Bst4CI | ACNGT | 2 cut(s) | 199, 229 |
| BstAPI | GCANNNNNTGC | 1 cut(s) | 81 |
| BstF5I | GGATG | 2 cut(s) | 102, 575 |
| BstFNI | CGCG | 1 cut(s) | 73 |
| BstHHI | GCGC | 1 cut(s) | 75 |
| BstKTI | GATC | 3 cut(s) | 7, 11, 439 |
| BstMAI | GTCTC | 1 cut(s) | 257 |
| BstMBI | GATC | 3 cut(s) | 4, 8, 436 |
| BstMWI | GCNNNNNNNGC | 1 cut(s) | 81 |
| BstNI | CCWGG | 1 cut(s) | 107 |
| BstSCI | CCNGG | 2 cut(s) | 105, 631 |
| BstUI | CGCG | 1 cut(s) | 73 |
| Bsu15I | ATCGAT | 1 cut(s) | 7 |
| BsuRI | GGCC | 2 cut(s) | 117, 530 |
| BsuTUI | ATCGAT | 1 cut(s) | 7 |
| BtsCI | GGATG | 2 cut(s) | 102, 575 |
| BtsIMutI | CAGTG | 1 cut(s) | 204 |
| CfoI | GCGC | 1 cut(s) | 75 |
| Cfr13I | GGNCC | 3 cut(s) | 109, 357, 571 |
| ClaI | ATCGAT | 1 cut(s) | 7 |
| CseI | GACGC | 1 cut(s) | 571 |
| CviAII | CATG | 2 cut(s) | 503, 783 |
| CviJI | RGCY | 8 cut(s) | 117, 342, 500, 530, 703, 709, 732, 857 |
| CviKI_1 | RGCY | 8 cut(s) | 117, 342, 500, 530, 703, 709, 732, 857 |
| DpnI | GATC | 3 cut(s) | 6, 10, 438 |
| DpnII | GATC | 3 cut(s) | 4, 8, 436 |
| EaeI | YGGCCR | 2 cut(s) | 115, 528 |
| Eco47I | GGWCC | 3 cut(s) | 109, 357, 571 |
| Eco57I | CTGAAG | 1 cut(s) | 542 |
| Eco88I | CYCGRG | 1 cut(s) | 566 |
| EcoO109I | RGGNCCY | 2 cut(s) | 357, 571 |
| EcoRI | GAATTC | 1 cut(s) | 537 |
| EcoRII | CCWGG | 1 cut(s) | 105 |
| FaeI | CATG | 2 cut(s) | 506, 786 |
| FaqI | GGGAC | 3 cut(s) | 148, 370, 474 |
| FatI | CATG | 2 cut(s) | 502, 782 |
| FauI | CCCGC | 1 cut(s) | 78 |
| FauNDI | CATATG | 1 cut(s) | 208 |
| FblI | GTMKAC | 1 cut(s) | 29 |
| FokI | GGATG | 2 cut(s) | 89, 562 |
| FspBI | CTAG | 1 cut(s) | 660 |
| GlaI | GCGC | 1 cut(s) | 74 |
| HaeIII | GGCC | 2 cut(s) | 117, 530 |
| HapII | CCGG | 3 cut(s) | 326, 531, 632 |
| HgaI | GACGC | 1 cut(s) | 571 |
| HhaI | GCGC | 1 cut(s) | 75 |
| Hin1II | CATG | 2 cut(s) | 506, 786 |
| Hin6I | GCGC | 1 cut(s) | 73 |
| HinP1I | GCGC | 1 cut(s) | 73 |
| HpaII | CCGG | 3 cut(s) | 326, 531, 632 |
| Hpy166II | GTNNAC | 3 cut(s) | 30, 62, 508 |
| Hpy188I | TCNGA | 1 cut(s) | 561 |
| Hpy188III | TCNNGA | 4 cut(s) | 326, 372, 434, 459 |
| Hpy8I | GTNNAC | 3 cut(s) | 30, 62, 508 |
| Hpy99I | CGWCG | 1 cut(s) | 547 |
| HpyAV | CCTTC | 5 cut(s) | 107, 213, 308, 581, 693 |
| HpyCH4III | ACNGT | 2 cut(s) | 199, 229 |
| HpyCH4V | TGCA | 6 cut(s) | 43, 84, 220, 350, 668, 865 |
| HpyF10VI | GCNNNNNNNGC | 1 cut(s) | 81 |
| Hsp92II | CATG | 2 cut(s) | 506, 786 |
| HspAI | GCGC | 1 cut(s) | 73 |
| Kpn2I | TCCGGA | 1 cut(s) | 325 |
| Kzo9I | GATC | 3 cut(s) | 4, 8, 436 |
| LpnPI | CCDG | 8 cut(s) | 92, 117, 119, 339, 352, 544, 645, 654 |
| LweI | GCATC | 1 cut(s) | 655 |
| MaeI | CTAG | 1 cut(s) | 660 |
| MaeIII | GTNAC | 2 cut(s) | 229, 476 |
| MalI | GATC | 3 cut(s) | 6, 10, 438 |
| MboI | GATC | 3 cut(s) | 4, 8, 436 |
| MboII | GAAGA | 5 cut(s) | 80, 166, 341, 546, 698 |
| MfeI | CAATTG | 1 cut(s) | 840 |
| MluCI | AATT | 9 cut(s) | 157, 190, 307, 321, 412, 465, 537, 840, 873 |
| MmeI | TCCRAC | 2 cut(s) | 72, 405 |
| MnlI | CCTC | 7 cut(s) | 122, 208, 353, 409, 480, 562, 624 |
| MroI | TCCGGA | 1 cut(s) | 325 |
| MseI | TTAA | 4 cut(s) | 56, 383, 620, 767 |
| MspI | CCGG | 3 cut(s) | 326, 531, 632 |
| MspR9I | CCNGG | 2 cut(s) | 107, 633 |
| MunI | CAATTG | 1 cut(s) | 840 |
| MvaI | CCWGG | 1 cut(s) | 107 |
| MvnI | CGCG | 1 cut(s) | 73 |
| MwoI | GCNNNNNNNGC | 1 cut(s) | 81 |
| NciI | CCSGG | 1 cut(s) | 633 |
| NdeI | CATATG | 1 cut(s) | 208 |
| NdeII | GATC | 3 cut(s) | 4, 8, 436 |
| NlaIII | CATG | 2 cut(s) | 506, 786 |
| NlaIV | GGNNCC | 3 cut(s) | 358, 573, 612 |
| NmeAIII | GCCGAG | 2 cut(s) | 93, 708 |
| NmuCI | GTSAC | 1 cut(s) | 229 |
| PaeR7I | CTCGAG | 1 cut(s) | 566 |
| PcsI | WCGNNNNNNNCGW | 1 cut(s) | 258 |
| PfoI | TCCNGGA | 2 cut(s) | 105, 631 |
| PpuMI | RGGWCCY | 2 cut(s) | 357, 571 |
| PshBI | ATTAAT | 1 cut(s) | 767 |
| Psp5II | RGGWCCY | 2 cut(s) | 357, 571 |
| Psp6I | CCWGG | 1 cut(s) | 105 |
| PspGI | CCWGG | 1 cut(s) | 105 |
| PspN4I | GGNNCC | 3 cut(s) | 358, 573, 612 |
| PspPI | GGNCC | 3 cut(s) | 109, 357, 571 |
| PspPPI | RGGWCCY | 2 cut(s) | 357, 571 |
| PspXI | VCTCGAGB | 1 cut(s) | 566 |
| SaqAI | TTAA | 4 cut(s) | 56, 383, 620, 767 |
| Sau3AI | GATC | 3 cut(s) | 4, 8, 436 |
| Sau96I | GGNCC | 3 cut(s) | 109, 357, 571 |
| ScrFI | CCNGG | 2 cut(s) | 107, 633 |
| SetI | ASST | 5 cut(s) | 99, 114, 219, 362, 745 |
| SfaNI | GCATC | 1 cut(s) | 655 |
| Sfr274I | CTCGAG | 1 cut(s) | 566 |
| SinI | GGWCC | 3 cut(s) | 109, 357, 571 |
| SlaI | CTCGAG | 1 cut(s) | 566 |
| SmlI | CTYRAG | 1 cut(s) | 566 |
| SmoI | CTYRAG | 1 cut(s) | 566 |
| Sse9I | AATT | 9 cut(s) | 157, 190, 307, 321, 412, 465, 537, 840, 873 |
| SsiI | CCGC | 2 cut(s) | 71, 647 |
| SspMI | CTAG | 1 cut(s) | 660 |
| StyD4I | CCNGG | 2 cut(s) | 105, 631 |
| TaaI | ACNGT | 2 cut(s) | 199, 229 |
| TaqI | TCGA | 2 cut(s) | 7, 567 |
| TasI | AATT | 9 cut(s) | 157, 190, 307, 321, 412, 465, 537, 840, 873 |
| Tru1I | TTAA | 4 cut(s) | 56, 383, 620, 767 |
| Tru9I | TTAA | 4 cut(s) | 56, 383, 620, 767 |
| TscAI | CASTG | 1 cut(s) | 204 |
| TseFI | GTSAC | 1 cut(s) | 229 |
| Tsp45I | GTSAC | 1 cut(s) | 229 |
| TspDTI | ATGAA | 6 cut(s) | 195, 288, 600, 654, 699, 724 |
| TspGWI | ACGGA | 2 cut(s) | 531, 711 |
| TspRI | CASTG | 1 cut(s) | 204 |
| VpaK11BI | GGWCC | 3 cut(s) | 109, 357, 571 |
| VspI | ATTAAT | 1 cut(s) | 767 |
| XapI | RAATTY | 6 cut(s) | 157, 321, 412, 465, 537, 873 |
| XhoI | CTCGAG | 1 cut(s) | 566 |
| XmiI | GTMKAC | 1 cut(s) | 29 |
| XspI | CTAG | 1 cut(s) | 660 |