FvH4_5g08450

LRR receptor-like serine threonine-protein kinase

Basic Information

Type: gene
Biological Identity
fragaria_vesca
Fvb5
Physical Location & Seq
Forward (+)
4891717 .. 4894656
2940 bp
Loading structure...
UTR
Exon/CDS
Intron
FvH4_5g08450.t1

Sequence Viewer

Length: 2634 bp
ATGGGCAACTATATCCTCATTCTGTTATTGTGCCAGTATTTGCTGATTACAAGTGAATTTTGTTTGGGTGAAGAACTTCCAGGCAGTGCGAAATGCATTGACGAAGAGAGACGAGTGCTTCTCACCTTCAAACACCATCTTACTGATCCTTCTGGCAGGCTTTCTTCTTGGTCAAGCGGCGATTGCTGTCAATGGAATGGTCTTTCATGCAACAACCAGACTGGCCACATTGTAAAGATGGATCTCCGGAATCCATATCCGTACAGCCTTAATGATTATGAGTGGGATTTCATGGACTACCAGCAGTCTTGCTTGAGTGGTAAGATAAATCCTTCTTTGCTTAGCTTAAAGCACTTATATTACTTAGACCTAAGCTGGAATGATTTTCGTGGGATTCACATTCCCAACTTCTTGGGGAAGCTTACGAGCTTGAGGTATCTCAATCTCTCTTATGCTTCATTTTCGGGAGAGATTCCCCATTTTCTTGGTAACCTCTCAAACTTGAACTATCTTGACCTTGACAATAGCCGACTCAGCGAAAGCATTGACGTAACCCTTGCTTCCAAAAACTTGAATTGGCTTTCTCATCTCTCCTCCATTAAGTACCTCAATCTCGGACGAGTTAACATTGGTGGTGTAGGAGTGAGTTGGTTACATTATGTCAACATGCTTCCCTCACTGTTGGAGTTGCATTTATCTGCATGTGGGATGGATTCAAACCAGCTTCCACTCTCATTACCAACCCTTAACTTCACGTCCCTTTCAGTCCTTGATATGTCTGAGAATTCTTTCAATTCTTCGATTCCAAGCTGGTTTTCTAATCTGACAAGTCTACGCACACTTGATCTACATGACAATTCTTTCGTTGGTCCCATTCCCAATGTACTTGCTAGCTTCAAAAATCTCAAGCACCTTGATCTATCAGTTAATCAACTTGAAGGATCCATTCCTGAAGTTTTGGGACAGCTTTCCCAGCTAGTTGTCTTAGACCTGTCTCAAAATTTTTGGGAAGGCACCTTAACAGAATCCCATTTCAAAAGTCTCACAAAATTAGACACTTTTGCCATTGGCACAGAAAGGCCTATGCCTCTCATTTTCAATGTGACATATGACAAACTTCCTCCTTTCAAGCTCTATGATATTTCCATTGTGAATTGTCTAGTCGGTGATGCATTTGCCGTCTGGCTTCAATCACAAACTAAATTGTCAGCTGTCACCCTTAGTGGTACTGGACTTTCTGGGATACCAGAGGAATGGTTGTTGAAGATATCATCCCGAGTTGATTATTTGGATTTATCCAACAATCAAATCCAAGGAAAGCTTCCATTTCAATCAAAGTTTCCAAACTTGTCCAGATTAGATTTGAGTCGCAATCGATTTTCCAAGTCTATTCCCTTAAATTTTGGACAACTAATGCCAAATCTACGAATGTTGATCTTGTCTGATAATCATCTAGGTGGTACCATTCCACCCTCTATTTGTGAAATTCCGTTGTGGATCATTTCTCTAAGTAACAATCAGCTATCTGGAGAGTTCCCTCGAGCATGGAGTTTGTGGACCGAAATCGATGTTGTGGATGTCTCAAGAAACAATCTCTCTGGTAATATTCCGAGTTCCATGGGTATCCCAAATAGTCTTGCTATCTTGAAGATGAACAACAATAACTTTGGTGGCAAAATTCTGTCTTCTTTGAAAAATTGCTCCAGGTTGAGTAGACTTGATCTCGGAGACAACAAGTTTTATGGAAATCTACCTTCATGGATAGGATCAAAGGTGACACTGCGTATACTACGATTGCGCACAAACTCTTTCAGTGGTCACATTCCCCATCACCTGTGCAATCTTATTGGTCTCCATGTCCTAGACCTTGCTCAGAACAACTTTACAGGTACCATTCCAAAGTGTTTGGATAATATGACTTCCATGGGTAGTGAAGATCCCATTGATACTTGGGATTTCTACGATTTTGTTGAGCAAACAACAATAATATCAAAAGGAAGAGAACTCGAATACTCTTCCAATCTAGAGTTGGTGAAGAGTATTGACCTGTCCTCAAATAACTTGGAAGGTGAAATTCCTGATGAAATATGCAGTCTCATAGCACTGAGTACCTTGAACTTGTCGTGGAATCATTTACATGGAAATATTCCATCAAACATTGGAAAATTGAGTTCGCTGGAAACACTTGACCTCTCAAACAATCACCTTTTTGGAGATATTCCTCAAAGCTTGTCATCTTTGAACTACTTGTCTCACTTGAACTTGTCTTGTAACAACTTTTCTGGAAGAATTCCTTCGGGCAATCAGCTCCGAACACTGGTCAATCCATCCATTTATGAGGGCAATCCATCATTGTGCGGCATTCCTCTTTCAACCAAGTGCCCTGGAGATGACGAACCTACTAGCACTGGAAAACTTCCTGCCCAAGAAAATGATGATGAAGATGGCAATGGAAAGCTTGGTCTCTATGTTAGCGTCGTGCTTGGCTTTATCATAGGCTTCTGGGGTGTTTGTGGCACATTACTTATGAAGAAATCATGGAGGCATGCCTATTTTCGGTTCTTCGACAACATCAAAGAAAAGATAATAGTGGCAATTGCAGTGAAAGTAGCTCATCTCCGAGGGCACCTTTGA

Protein Analysis

878

Amino Acids

97.76

Weight (kDa)

5.83

Isoelectric Point (pI)

34.45

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
LRRNT_2 PF08263 34 - 71 1.1e-12 Leucine rich repeat N-terminal domain
LRR_14 PF23598 111 - 366 1.2e-15 Leucine-rich repeat region
LRR_14 PF23598 217 - 480 9.3e-10 Leucine-rich repeat region
LRR_4 PF12799 427 - 464 5.5e-06 Leucine Rich repeats (2 copies)
LRR_14 PF23598 672 - 758 8.5e-08 Leucine-rich repeat region
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready

Orthologous Genes (Group: OG0000048)

Species Orthologous Gene IDs
arabidopsis_thaliana AT2G34930
fragaria_vesca FvH4_3g12670 FvH4_3g12672 FvH4_3g12740 FvH4_3g12742 FvH4_3g12770 FvH4_3g12770 FvH4_3g12860 FvH4_3g12890 FvH4_3g13431 FvH4_3g13433 FvH4_3g13435 FvH4_3g13470 FvH4_3g13470 FvH4_3g13480 FvH4_3g13562 FvH4_3g13580 FvH4_3g13600 FvH4_3g13600 FvH4_3g13600 FvH4_3g13600 FvH4_3g13600 FvH4_3g13600 FvH4_3g13610 FvH4_3g13620 FvH4_3g13620 FvH4_3g23240 FvH4_3g32910 FvH4_3g35070 FvH4_3g45520 FvH4_5g08430 FvH4_5g08450 FvH4_6g53230 FvH4_6g53300
malus_domestica MD05G1217600.v1.1 MD05G1217700.v1.1 MD05G1224700.v1.1 MD05G1225100.v1.1 MD05G1225300.v1.1 MD05G1225400.v1.1 MD05G1235900.v1.1 MD05G1236100.v1.1 MD05G1236300.v1.1 MD05G1237200.v1.1 MD05G1241600.v1.1 MD05G1245700.v1.1 MD05G1245800.v1.1 MD05G1245900.v1.1 MD05G1246000.v1.1 MD05G1246100.v1.1 MD05G1246300.v1.1 MD05G1246400.v1.1 MD05G1246500.v1.1 MD05G1248100.v1.1 MD05G1248200.v1.1 MD05G1264300.v1.1 MD05G1275900.v1.1 MD07G1051400.v1.1 MD09G1012600.v1.1 MD09G1012700.v1.1 MD09G1012800.v1.1 MD10G1221400.v1.1 MD10G1221500.v1.1 MD10G1221600.v1.1 MD10G1221900.v1.1 MD10G1222200.v1.1 MD10G1222400.v1.1 MD10G1222500.v1.1 MD10G1222900.v1.1 MD10G1223000.v1.1 MD10G1223100.v1.1 MD10G1223500.v1.1 MD10G1228000.v1.1 MD12G1019600.v1.1 MD12G1020000.v1.1 MD12G1020100.v1.1 MD17G1013200.v1.1 MD17G1013300.v1.1 MD17G1013400.v1.1
prunus_persica Prupe.1G060500_v2.0.a1 Prupe.1G100100_v2.0.a1 Prupe.3G124000_v2.0.a1 Prupe.3G304400_v2.0.a1 Prupe.4G116800_v2.0.a1 Prupe.4G116900_v2.0.a1 Prupe.4G117000_v2.0.a1 Prupe.4G121800_v2.0.a1 Prupe.4G121900_v2.0.a1 Prupe.4G122000_v2.0.a1 Prupe.4G122100_v2.0.a1 Prupe.4G122200_v2.0.a1 Prupe.4G122300_v2.0.a1 Prupe.4G122500_v2.0.a1 Prupe.4G122600_v2.0.a1 Prupe.4G122800_v2.0.a1 Prupe.4G122900_v2.0.a1 Prupe.4G123000_v2.0.a1 Prupe.4G123100_v2.0.a1 Prupe.4G123200_v2.0.a1 Prupe.4G131500_v2.0.a1 Prupe.4G131600_v2.0.a1 Prupe.7G032500_v2.0.a1 Prupe.7G032900_v2.0.a1 Prupe.7G033000_v2.0.a1 Prupe.7G033100_v2.0.a1 Prupe.7G033300_v2.0.a1 Prupe.7G033600_v2.0.a1 Prupe.7G034600_v2.0.a1 Prupe.7G040200_v2.0.a1 Prupe.7G059200_v2.0.a1
pyrus_communis pycom05g20580 pycom05g20590 pycom05g20760 pycom05g20800 pycom05g21280 pycom05g21290 pycom05g21820 pycom05g21830 pycom05g22180 pycom05g22190 pycom05g22210 pycom05g22450 pycom05g22460 pycom05g22470 pycom05g22480 pycom05g22490 pycom05g23770 pycom05g23780 pycom05g24050 pycom05g24060 pycom07g03910 pycom10g18700 pycom10g18720 pycom10g18730 pycom10g18740 pycom10g19150 pycom111g01060 pycom12g01660 pycom12g01690 pycom12g01720 pycom12g01740 pycom12g01750 pycom12g01770 pycom12g01810 pycom12g01820 pycom12g01830 pycom12g01840 pycom12g01870 pycom12g01900 pycom17g01060 pycom17g01070
rosa_chinensis RchiOBHm_Chr1g0315041 RchiOBHm_Chr1g0315051 RchiOBHm_Chr1g0315071 RchiOBHm_Chr1g0315161 RchiOBHm_Chr1g0315211 RchiOBHm_Chr1g0315251 RchiOBHm_Chr1g0315321 RchiOBHm_Chr1g0315391 RchiOBHm_Chr1g0315451 RchiOBHm_Chr1g0315481 RchiOBHm_Chr1g0315551 RchiOBHm_Chr1g0315601 RchiOBHm_Chr1g0315621 RchiOBHm_Chr1g0359221 RchiOBHm_Chr2g0142981 RchiOBHm_Chr2g0143001 RchiOBHm_Chr2g0143061 RchiOBHm_Chr2g0143091 RchiOBHm_Chr2g0175321 RchiOBHm_Chr2g0175341 RchiOBHm_Chr2g0175361 RchiOBHm_Chr2g0175371 RchiOBHm_Chr3g0470491 RchiOBHm_Chr3g0480881 RchiOBHm_Chr3g0485511 RchiOBHm_Chr5g0020741 RchiOBHm_Chr5g0020901 RchiOBHm_Chr5g0020931 RchiOBHm_Chr5g0020941 RchiOBHm_Chr5g0020961 RchiOBHm_Chr5g0020971 RchiOBHm_Chr5g0021451 RchiOBHm_Chr5g0021531 RchiOBHm_Chr5g0021831 RchiOBHm_Chr5g0021841 RchiOBHm_Chr5g0021931 RchiOBHm_Chr5g0021941 RchiOBHm_Chr5g0021981 RchiOBHm_Chr5g0021991 RchiOBHm_Chr5g0022011 RchiOBHm_Chr5g0022181 RchiOBHm_Chr5g0022191 RchiOBHm_Chr5g0022211 RchiOBHm_Chr5g0022221 RchiOBHm_Chr5g0022231 RchiOBHm_Chr5g0022291 RchiOBHm_Chr5g0022301 RchiOBHm_Chr5g0022331 RchiOBHm_Chr5g0022361 RchiOBHm_Chr5g0022371 RchiOBHm_Chr5g0022381 RchiOBHm_Chr5g0022401 RchiOBHm_Chr5g0022431 RchiOBHm_Chr5g0022451 RchiOBHm_Chr5g0022541 RchiOBHm_Chr5g0022591 RchiOBHm_Chr5g0022601 RchiOBHm_Chr5g0022701 RchiOBHm_Chr5g0022741 RchiOBHm_Chr5g0022791 RchiOBHm_Chr5g0022811 RchiOBHm_Chr5g0022851 RchiOBHm_Chr5g0029441 RchiOBHm_Chr5g0041631 RchiOBHm_Chr5g0069391 RchiOBHm_Chr6g0273811 RchiOBHm_Chr6g0273831 RchiOBHm_Chr6g0275331 RchiOBHm_Chr7g0219061
rosa_laevigata RLG00000002463 RLG00000020007 RLG00000020008 RLG00000022320 RLG00000022321 RLG00000023446 RLG00000030742 RLG00000030743 RLG00000030747 RLG00000032557 RLG00000032564 RLG00000032571 RLG00000032573 RLG00000032574 RLG00000032612 RLG00000032633 RLG00000032636 RLG00000032638 RLG00000032650 RLG00000032651 RLG00000032652 RLG00000032653 RLG00000032655 RLG00000032673 RLG00000032678 RLG00000032769 RLG00000032857 RLG00000033168 RLG00000033465 RLG00000034086 RLG00000034222 RLG00000035290
rosa_multiflora Rmu_co8143358.1_g000001 Rmu_co8518791.1_g000001 Rmu_sc0000178.1_g000008 Rmu_sc0000178.1_g000014 Rmu_sc0000401.1_g000005 Rmu_sc0000401.1_g000013 Rmu_sc0000401.1_g000017 Rmu_sc0000401.1_g000018 Rmu_sc0000401.1_g000024 Rmu_sc0000401.1_g000025 Rmu_sc0000576.1_g000020 Rmu_sc0001585.1_g000003 Rmu_sc0001585.1_g000005 Rmu_sc0001585.1_g000008 Rmu_sc0001784.1_g000006 Rmu_sc0001784.1_g000011 Rmu_sc0001784.1_g000022 Rmu_sc0001784.1_g000028 Rmu_sc0002052.1_g000004 Rmu_sc0002052.1_g000011 Rmu_sc0002277.1_g000003 Rmu_sc0002277.1_g000006 Rmu_sc0002277.1_g000024 Rmu_sc0002658.1_g000012 Rmu_sc0003512.1_g000004 Rmu_sc0003512.1_g000007 Rmu_sc0004180.1_g000016 Rmu_sc0004180.1_g000029 Rmu_sc0004180.1_g000034 Rmu_sc0005639.1_g000008 Rmu_sc0005639.1_g000023 Rmu_sc0006070.1_g000016 Rmu_sc0006070.1_g000017 Rmu_sc0006966.1_g000021 Rmu_sc0006966.1_g000023 Rmu_sc0007239.1_g000003 Rmu_sc0008460.1_g000010 Rmu_sc0009984.1_g000008 Rmu_sc0010181.1_g000005 Rmu_sc0010181.1_g000010 Rmu_sc0010503.1_g000006 Rmu_sc0011646.1_g000003 Rmu_sc0012984.1_g000011 Rmu_sc0016972.1_g000005 Rmu_sc0016972.1_g000008 Rmu_sc0023070.1_g000003 Rmu_sc0025660.1_g000001 Rmu_ssc0000322.1_g000019
rosa_roxburghii Rroxscaffold_1G00038860 Rroxscaffold_1G00053490 Rroxscaffold_1G00053500 Rroxscaffold_1G00054230 Rroxscaffold_1G00056460 Rroxscaffold_1G00056470 Rroxscaffold_1G00056480 Rroxscaffold_1G00056500 Rroxscaffold_1G00056510 Rroxscaffold_1G00056620 Rroxscaffold_1G00056690 Rroxscaffold_1G00056710 Rroxscaffold_1G00056720 Rroxscaffold_1G00056730 Rroxscaffold_1G00056740 Rroxscaffold_1G00056750 Rroxscaffold_1G00056760 Rroxscaffold_1G00056870 Rroxscaffold_1G00056900 Rroxscaffold_1G00057120 Rroxscaffold_1G00057560 Rroxscaffold_2G00077430 Rroxscaffold_2G00102160 Rroxscaffold_3G00231420 Rroxscaffold_3G00231430 Rroxscaffold_4G00297230 Rroxscaffold_4G00331570 Rroxscaffold_6G00396700 Rroxscaffold_6G00400940 Rroxscaffold_7G00192740
rosa_rugosa Rorug01G0004400 Rorug01G0004500 Rorug02G0377600 Rorug02G0378000 Rorug02G0582800 Rorug02G0583400 Rorug03G0187000 Rorug03G0218800 Rorug04G0081200 Rorug05G0062700 Rorug05G0062700 Rorug05G0063100 Rorug05G0063200 Rorug05G0063200 Rorug05G0063200 Rorug05G0067000 Rorug05G0069700 Rorug05G0069900 Rorug05G0070000 Rorug05G0070100 Rorug05G0070300 Rorug05G0070400 Rorug05G0070600 Rorug05G0070600 Rorug05G0072300 Rorug05G0072400 Rorug05G0072500 Rorug05G0072500 Rorug05G0072600.1 Rorug05G0072700 Rorug05G0072800 Rorug05G0072800 Rorug05G0072900 Rorug05G0073000 Rorug05G0073000 Rorug05G0073400 Rorug05G0073400 Rorug05G0073400 Rorug05G0074800 Rorug05G0075000 Rorug05G0114300 Rorug05G0194200 Rorug06G0097800
rosa_samantha Rh2AG401400 Rh2CG387600 Rh2CG417000 Rh2CG637400 Rh5CG169600 Rh5CG172100 Rh5CG175200 Rh5CG317100 Rh6DG187900
rosa_wichuraiana Rw1G000750 Rw1G000790 Rw1G000820 Rw1G000860 Rw1G000880 Rw1G000910 Rw2G035180 Rw2G035200 Rw2G035240 Rw2G054370 Rw2G054380 Rw5G013570 Rw5G013580 Rw5G013590 Rw5G013910 Rw5G013980 Rw5G014110 Rw5G014120 Rw5G014280 Rw5G014310 Rw5G014400 Rw5G014420 Rw5G014440 Rw5G014460 Rw5G014480 Rw5G014500 Rw5G014520 Rw5G014530 Rw5G042390

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
Acc16I TGCGCA 1 cut(s) 1799
Acc65I GGTACC 2 cut(s) 1460, 1889
AccB1I GGYRCC 4 cut(s) 1013, 1460, 1889, 2625
AccI GTMKAC 3 cut(s) 832, 1714, 1786
AccIII TCCGGA 1 cut(s) 246
AciI CCGC 2 cut(s) 177, 2358
AclWI GGATC 7 cut(s) 140, 249, 936, 949, 1505, 1774, 1931
AcoI YGGCCR 1 cut(s) 223
AcsI RAATTY 8 cut(s) 56, 784, 1000, 1399, 1485, 1677, 2073, 2289
AcuI CTGAAG 1 cut(s) 972
AfaI GTAC 7 cut(s) 263, 605, 885, 1228, 1462, 1891, 2110
AfiI CCNNNNNNNGG 2 cut(s) 2317, 2556
AjiI CACGTC 1 cut(s) 756
AjnI CCWGG 3 cut(s) 79, 1703, 2383
AjuI GAANNNNNNNTTGG 4 cut(s) 799, 831, 1305, 1337
Alw26I GTCTC 9 cut(s) 103, 999, 1046, 1585, 1722, 1856, 2099, 2256, 2468
AlwI GGATC 7 cut(s) 140, 249, 936, 949, 1505, 1774, 1931
Ama87I CYCGRG 2 cut(s) 1275, 1539
Aor13HI TCCGGA 1 cut(s) 246
AoxI GGCC 2 cut(s) 223, 1079
ApoI RAATTY 8 cut(s) 56, 784, 1000, 1399, 1485, 1677, 2073, 2289
ArsI GACNNNNNNTTYG 2 cut(s) 845, 877
Asp700I GAANNNNTTC 3 cut(s) 75, 788, 2293
Asp718I GGTACC 2 cut(s) 1460, 1889
AspLEI GCGC 1 cut(s) 1800
AspS9I GGNCC 2 cut(s) 869, 1557
AsuHPI GGTGA 9 cut(s) 80, 115, 1178, 1207, 1786, 1823, 2044, 2081, 2195
AsuNHI GCTAGC 1 cut(s) 890
AvaI CYCGRG 2 cut(s) 1275, 1539
AvaII GGWCC 2 cut(s) 869, 1557
BaeGI GKGCMC 2 cut(s) 2384, 2628
BalI TGGCCA 1 cut(s) 225
BamHI GGATCC 1 cut(s) 941
BanI GGYRCC 4 cut(s) 1013, 1460, 1889, 2625
BbsI GAAGAC 1 cut(s) 1677
BccI CCATC 8 cut(s) 144, 232, 703, 1836, 2158, 2335, 2356, 2438
BceAI ACGGC 1 cut(s) 1163
BciT130I CCWGG 3 cut(s) 81, 1705, 2385
BciVI GTATCC 2 cut(s) 1236, 1634
BcoDI GTCTC 9 cut(s) 103, 999, 1046, 1585, 1722, 1856, 2099, 2256, 2468
BfaI CTAG 7 cut(s) 891, 977, 1160, 1454, 1862, 2024, 2403
BfuI GTATCC 2 cut(s) 1236, 1634
BisI GCNGC 2 cut(s) 178, 2359
BlpI GCTNAGC 1 cut(s) 341
BlsI GCNGC 2 cut(s) 179, 2360
Bme1390I CCNGG 3 cut(s) 81, 1705, 2385
Bme18I GGWCC 2 cut(s) 869, 1557
BmeT110I CYCGRG 2 cut(s) 1275, 1539
BmgBI CACGTC 1 cut(s) 756
BmgT120I GGNCC 2 cut(s) 869, 1557
BmiI GGNNCC 6 cut(s) 871, 943, 1015, 1462, 1891, 2627
BmrFI CCNGG 3 cut(s) 81, 1705, 2385
BmsI GCATC 1 cut(s) 1159
BmtI GCTAGC 1 cut(s) 894
BpiI GAAGAC 1 cut(s) 1677
BplI GAGNNNNNCTC 2 cut(s) 105, 137
BpmI CTGGAG 3 cut(s) 1548, 1687, 2406
Bpu10I CCTNAGC 1 cut(s) 371
Bpu1102I GCTNAGC 1 cut(s) 341
BpuEI CTTGAG 4 cut(s) 334, 451, 890, 1567
Bsa29I ATCGAT 2 cut(s) 1375, 1566
BsaBI GATNNNNATC 1 cut(s) 1449
BsaI GGTCTC 2 cut(s) 1856, 2468
BsaJI CCNNGG 5 cut(s) 1312, 1617, 1923, 2383, 2620
BsaWI WCCGGW 1 cut(s) 246
Bsc4I CCNNNNNNNGG 2 cut(s) 2317, 2556
Bse1I ACTGG 5 cut(s) 34, 226, 1234, 2322, 2413
Bse3DI GCAATG 1 cut(s) 2455
Bse8I GATNNNNATC 1 cut(s) 1449
BseAI TCCGGA 1 cut(s) 246
BseBI CCWGG 3 cut(s) 81, 1705, 2385
BseCI ATCGAT 2 cut(s) 1375, 1566
BseDI CCNNGG 5 cut(s) 1312, 1617, 1923, 2383, 2620
BseGI GGATG 4 cut(s) 714, 1271, 1582, 2327
BseJI GATNNNNATC 1 cut(s) 1449
BseLI CCNNNNNNNGG 2 cut(s) 2317, 2556
BseMI GCAATG 1 cut(s) 2455
BseMII CTCAG 4 cut(s) 547, 771, 1886, 2096
BseNI ACTGG 5 cut(s) 34, 226, 1234, 2322, 2413
BseRI GAGGAG 1 cut(s) 583
BseSI GKGCMC 2 cut(s) 2384, 2628
BseYI CCCAGC 1 cut(s) 972
BshFI GGCC 2 cut(s) 225, 1081
BshNI GGYRCC 4 cut(s) 1013, 1460, 1889, 2625
BshVI ATCGAT 2 cut(s) 1375, 1566
BsiHKCI CYCGRG 2 cut(s) 1275, 1539
BsiSI CCGG 1 cut(s) 247
BslFI GGGAC 3 cut(s) 742, 855, 975
BslI CCNNNNNNNGG 2 cut(s) 2317, 2556
BsmAI GTCTC 9 cut(s) 103, 999, 1046, 1585, 1722, 1856, 2099, 2256, 2468
BsmBI CGTCTC 1 cut(s) 103
BsmFI GGGAC 3 cut(s) 742, 855, 975
BsmI GAATGC 1 cut(s) 2361
BsnI GGCC 2 cut(s) 225, 1081
Bso31I GGTCTC 2 cut(s) 1856, 2468
BsoBI CYCGRG 2 cut(s) 1275, 1539
Bsp1286I GDGCHC 2 cut(s) 2384, 2628
Bsp13I TCCGGA 1 cut(s) 246
Bsp1720I GCTNAGC 1 cut(s) 341
Bsp19I CCATGG 2 cut(s) 1617, 1923
BspACI CCGC 2 cut(s) 177, 2358
BspANI GGCC 2 cut(s) 225, 1081
BspCNI CTCAG 4 cut(s) 546, 772, 1885, 2097
BspDI ATCGAT 2 cut(s) 1375, 1566
BspEI TCCGGA 1 cut(s) 246
BspLI GGNNCC 6 cut(s) 871, 943, 1015, 1462, 1891, 2627
BspOI GCTAGC 1 cut(s) 894
BspPI GGATC 7 cut(s) 140, 249, 936, 949, 1505, 1774, 1931
BspT107I GGYRCC 4 cut(s) 1013, 1460, 1889, 2625
BspTNI GGTCTC 2 cut(s) 1856, 2468
BsrDI GCAATG 1 cut(s) 2455
BsrI ACTGG 5 cut(s) 34, 226, 1234, 2322, 2413
BssECI CCNNGG 5 cut(s) 1312, 1617, 1923, 2383, 2620
BssNAI GTATAC 1 cut(s) 1787
BssT1I CCWWGG 3 cut(s) 1312, 1617, 1923
Bst1107I GTATAC 1 cut(s) 1787
Bst2UI CCWGG 3 cut(s) 81, 1705, 2385
Bst4CI ACNGT 1 cut(s) 681
Bst6I CTCTTC 4 cut(s) 99, 1993, 2020, 2030
BstC8I GCNNGC 3 cut(s) 158, 892, 2547
BstDSI CCRYGG 2 cut(s) 1617, 1923
BstEII GGTNACC 1 cut(s) 488
BstF5I GGATG 4 cut(s) 714, 1271, 1582, 2327
BstHHI GCGC 1 cut(s) 1800
BstMAI GTCTC 9 cut(s) 103, 999, 1046, 1585, 1722, 1856, 2099, 2256, 2468
BstMWI GCNNNNNNNGC 3 cut(s) 183, 534, 973
BstNI CCWGG 3 cut(s) 81, 1705, 2385
BstNSI RCATGY 3 cut(s) 670, 705, 2549
BstPI GGTNACC 1 cut(s) 488
BstSCI CCNGG 3 cut(s) 79, 1703, 2383
BstSLI GKGCMC 2 cut(s) 2384, 2628
BstV2I GAAGAC 1 cut(s) 1677
BstX2I RGATCY 3 cut(s) 241, 941, 1936
BstXI CCANNNNNNTGG 3 cut(s) 412, 485, 1254
BstYI RGATCY 3 cut(s) 241, 941, 1936
BstZ17I GTATAC 1 cut(s) 1787
Bsu15I ATCGAT 2 cut(s) 1375, 1566
BsuI GTATCC 2 cut(s) 1236, 1634
BsuRI GGCC 2 cut(s) 225, 1081
BsuTUI ATCGAT 2 cut(s) 1375, 1566
BtgI CCRYGG 2 cut(s) 1617, 1923
BtrI CACGTC 1 cut(s) 756
BtsCI GGATG 4 cut(s) 714, 1271, 1582, 2327
BtsI GCAGTG 3 cut(s) 91, 1778, 2607
BtsIMutI CAGTG 8 cut(s) 91, 677, 1778, 1819, 2102, 2315, 2406, 2607
Cac8I GCNNGC 3 cut(s) 158, 892, 2547
CfoI GCGC 1 cut(s) 1800
Cfr13I GGNCC 2 cut(s) 869, 1557
ClaI ATCGAT 2 cut(s) 1375, 1566
CseI GACGC 1 cut(s) 2464
Csp6I GTAC 7 cut(s) 262, 604, 884, 1227, 1461, 1890, 2109
CviQI GTAC 7 cut(s) 262, 604, 884, 1227, 1461, 1890, 2109
EaeI YGGCCR 1 cut(s) 223
Eam1104I CTCTTC 4 cut(s) 99, 1993, 2020, 2030
EarI CTCTTC 4 cut(s) 99, 1993, 2020, 2030
Eco130I CCWWGG 3 cut(s) 1312, 1617, 1923
Eco147I AGGCCT 1 cut(s) 1081
Eco31I GGTCTC 2 cut(s) 1856, 2468
Eco32I GATATC 1 cut(s) 1269
Eco47I GGWCC 2 cut(s) 869, 1557
Eco57I CTGAAG 1 cut(s) 972
Eco88I CYCGRG 2 cut(s) 1275, 1539
Eco91I GGTNACC 1 cut(s) 488
EcoO65I GGTNACC 1 cut(s) 488
EcoRI GAATTC 2 cut(s) 784, 2289
EcoRII CCWGG 3 cut(s) 79, 1703, 2383
EcoRV GATATC 1 cut(s) 1269
EcoT14I CCWWGG 3 cut(s) 1312, 1617, 1923
EcoT22I ATGCAT 2 cut(s) 98, 1174
ErhI CCWWGG 3 cut(s) 1312, 1617, 1923
Esp3I CGTCTC 1 cut(s) 103
FalI AAGNNNNNCTT 4 cut(s) 1305, 1337, 2278, 2310
FaqI GGGAC 3 cut(s) 742, 855, 975
FauNDI CATATG 1 cut(s) 1108
FblI GTMKAC 3 cut(s) 832, 1714, 1786
Fnu4HI GCNGC 2 cut(s) 178, 2359
FokI GGATG 4 cut(s) 721, 1258, 1589, 2314
Fsp4HI GCNGC 2 cut(s) 178, 2359
FspBI CTAG 7 cut(s) 891, 977, 1160, 1454, 1862, 2024, 2403
FspI TGCGCA 1 cut(s) 1799
GlaI GCGC 1 cut(s) 1799
GluI GCNGC 2 cut(s) 178, 2359
GsaI CCCAGC 1 cut(s) 976
GsuI CTGGAG 3 cut(s) 1548, 1687, 2406
HaeIII GGCC 2 cut(s) 225, 1081
HapII CCGG 1 cut(s) 247
HgaI GACGC 1 cut(s) 2464
HhaI GCGC 1 cut(s) 1800
Hin6I GCGC 1 cut(s) 1798
HinP1I GCGC 1 cut(s) 1798
HincII GTYRAC 2 cut(s) 625, 664
HindII GTYRAC 2 cut(s) 625, 664
HindIII AAGCTT 4 cut(s) 419, 1319, 2227, 2456
HinfI GANTC 9 cut(s) 250, 394, 472, 531, 713, 802, 1025, 1366, 2128
HpaI GTTAAC 1 cut(s) 625
HpaII CCGG 1 cut(s) 247
HphI GGTGA 9 cut(s) 80, 115, 1178, 1207, 1786, 1823, 2044, 2081, 2195
Hpy166II GTNNAC 6 cut(s) 625, 664, 833, 1557, 1715, 1787
Hpy188I TCNGA 9 cut(s) 617, 781, 825, 1444, 1611, 1727, 1875, 2312, 2621
Hpy8I GTNNAC 6 cut(s) 625, 664, 833, 1557, 1715, 1787
Hpy99I CGWCG 1 cut(s) 2480
HpyAV CCTTC 8 cut(s) 136, 159, 342, 932, 1004, 1764, 2060, 2304
HpyCH4III ACNGT 1 cut(s) 681
HpyCH4IV ACGT 2 cut(s) 549, 755
HpyCH4V TGCA 8 cut(s) 96, 210, 691, 701, 1172, 1839, 2091, 2600
HpyF10VI GCNNNNNNNGC 3 cut(s) 183, 534, 973
HpySE526I ACGT 2 cut(s) 549, 755
HspAI GCGC 1 cut(s) 1798
Kpn2I TCCGGA 1 cut(s) 246
KpnI GGTACC 2 cut(s) 1464, 1893
KspAI GTTAAC 1 cut(s) 625
LmnI GCTCC 2 cut(s) 1706, 2313
LweI GCATC 1 cut(s) 1159
MaeI CTAG 7 cut(s) 891, 977, 1160, 1454, 1862, 2024, 2403
MaeII ACGT 2 cut(s) 549, 755
MaeIII GTNAC 9 cut(s) 488, 550, 651, 1102, 1213, 1511, 1774, 1817, 2270
MfeI CAATTG 1 cut(s) 2595
MflI RGATCY 3 cut(s) 241, 941, 1936
MhlI GDGCHC 2 cut(s) 2384, 2628
MlsI TGGCCA 1 cut(s) 225
MluNI TGGCCA 1 cut(s) 225
MlyI GAGTC 2 cut(s) 525, 1375
MmeI TCCRAC 2 cut(s) 663, 1323
Mox20I TGGCCA 1 cut(s) 225
Mph1103I ATGCAT 2 cut(s) 98, 1174
MroI TCCGGA 1 cut(s) 246
MroXI GAANNNNTTC 3 cut(s) 75, 788, 2293
MscI TGGCCA 1 cut(s) 225
MseI TTAA 8 cut(s) 270, 347, 600, 624, 747, 927, 1019, 1397
MslI CAYNNNNRTG 3 cut(s) 1455, 2136, 2353
Msp20I TGGCCA 1 cut(s) 225
MspA1I CMGCKG 1 cut(s) 1211
MspI CCGG 1 cut(s) 247
MspR9I CCNGG 3 cut(s) 81, 1705, 2385
MunI CAATTG 1 cut(s) 2595
Mva1269I GAATGC 1 cut(s) 2361
MvaI CCWGG 3 cut(s) 81, 1705, 2385
MwoI GCNNNNNNNGC 3 cut(s) 183, 534, 973
NcoI CCATGG 2 cut(s) 1617, 1923
NdeI CATATG 1 cut(s) 1108
NheI GCTAGC 1 cut(s) 890
NlaIV GGNNCC 6 cut(s) 871, 943, 1015, 1462, 1891, 2627
NmuCI GTSAC 4 cut(s) 1102, 1213, 1774, 1817
NsbI TGCGCA 1 cut(s) 1799
NsiI ATGCAT 2 cut(s) 98, 1174
NspI RCATGY 3 cut(s) 670, 705, 2549
PaeI GCATGC 1 cut(s) 2549
PaeR7I CTCGAG 1 cut(s) 1539
PceI AGGCCT 1 cut(s) 1081
PctI GAATGC 1 cut(s) 2361
PdmI GAANNNNTTC 3 cut(s) 75, 788, 2293
PfeI GAWTC 7 cut(s) 250, 394, 472, 713, 802, 1025, 2128
PkrI GCNGC 2 cut(s) 179, 2360
PleI GAGTC 2 cut(s) 525, 1374
PpsI GAGTC 2 cut(s) 525, 1374
Psp6I CCWGG 3 cut(s) 79, 1703, 2383
PspEI GGTNACC 1 cut(s) 488
PspFI CCCAGC 1 cut(s) 972
PspGI CCWGG 3 cut(s) 79, 1703, 2383
PspN4I GGNNCC 6 cut(s) 871, 943, 1015, 1462, 1891, 2627
PspPI GGNCC 2 cut(s) 869, 1557
PspXI VCTCGAGB 1 cut(s) 1539
PsuI RGATCY 3 cut(s) 241, 941, 1936
PvuII CAGCTG 1 cut(s) 1211
RsaI GTAC 7 cut(s) 263, 605, 885, 1228, 1462, 1891, 2110
RsaNI GTAC 7 cut(s) 262, 604, 884, 1227, 1461, 1890, 2109
RseI CAYNNNNRTG 3 cut(s) 1455, 2136, 2353
SaqAI TTAA 8 cut(s) 270, 347, 600, 624, 747, 927, 1019, 1397
SatI GCNGC 2 cut(s) 178, 2359
Sau96I GGNCC 2 cut(s) 869, 1557
SchI GAGTC 2 cut(s) 525, 1375
ScrFI CCNGG 3 cut(s) 81, 1705, 2385
SduI GDGCHC 2 cut(s) 2384, 2628
SfaNI GCATC 1 cut(s) 1159
Sfr274I CTCGAG 1 cut(s) 1539
SinI GGWCC 2 cut(s) 869, 1557
SlaI CTCGAG 1 cut(s) 1539
SmiMI CAYNNNNRTG 3 cut(s) 1455, 2136, 2353
SmlI CTYRAG 5 cut(s) 313, 430, 905, 1539, 1582
SmoI CTYRAG 5 cut(s) 313, 430, 905, 1539, 1582
SphI GCATGC 1 cut(s) 2549
SseBI AGGCCT 1 cut(s) 1081
SsiI CCGC 2 cut(s) 177, 2358
SspI AATATT 2 cut(s) 1606, 2146
SspMI CTAG 7 cut(s) 891, 977, 1160, 1454, 1862, 2024, 2403
StuI AGGCCT 1 cut(s) 1081
StyD4I CCNGG 3 cut(s) 79, 1703, 2383
StyI CCWWGG 3 cut(s) 1312, 1617, 1923
TaaI ACNGT 1 cut(s) 681
TaiI ACGT 2 cut(s) 552, 758
TaqI TCGA 6 cut(s) 800, 1375, 1540, 1566, 2007, 2565
TaqII GACCGA 1 cut(s) 1574
TatI WGTACW 1 cut(s) 883
TauI GCSGC 2 cut(s) 180, 2361
TfiI GAWTC 7 cut(s) 250, 394, 472, 713, 802, 1025, 2128
Tru1I TTAA 8 cut(s) 270, 347, 600, 624, 747, 927, 1019, 1397
Tru9I TTAA 8 cut(s) 270, 347, 600, 624, 747, 927, 1019, 1397
TscAI CASTG 8 cut(s) 91, 684, 1785, 1819, 2109, 2322, 2413, 2607
TseFI GTSAC 4 cut(s) 1102, 1213, 1774, 1817
Tsp45I GTSAC 4 cut(s) 1102, 1213, 1774, 1817
TspDTI ATGAA 8 cut(s) 195, 280, 447, 1667, 1746, 2097, 2454, 2543
TspGWI ACGGA 2 cut(s) 249, 1479
TspRI CASTG 8 cut(s) 91, 684, 1785, 1819, 2109, 2322, 2413, 2607
VpaK11BI GGWCC 2 cut(s) 869, 1557
XapI RAATTY 8 cut(s) 56, 784, 1000, 1399, 1485, 1677, 2073, 2289
XbaI TCTAGA 1 cut(s) 2023
XceI RCATGY 3 cut(s) 670, 705, 2549
XcmI CCANNNNNNNNNTGG 1 cut(s) 2026
XhoI CTCGAG 1 cut(s) 1539
XmiI GTMKAC 3 cut(s) 832, 1714, 1786
XmnI GAANNNNTTC 3 cut(s) 75, 788, 2293
XspI CTAG 7 cut(s) 891, 977, 1160, 1454, 1862, 2024, 2403
Zsp2I ATGCAT 2 cut(s) 98, 1174
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.