Basic Information

Type: gene

Biological Identity

Species

malus_domestica

Chromosome

Chr17

Orthogroup ID

OG0000048

Physical Location & Seq

Genomic Coordinates Reverse (-)

1128655 .. 1130886

Gene Structure 2232 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

MD17G1013300.v1.1.491

Sequence Viewer

CDS Protein Promoter (2k)

Length: 2232 bp

ATGAATTTCGCATCCCTTTCGGTTCTCGATCTCTCAAACAATGATTTCAACTCCACATTATCTCCCTGGTTGTTCAATCTGACTAAACTAGTCACCCTTGAAATGCACTCAACCAATCTCCACGGAGCACTTCCAGAAACATTTGGTAGTTTGACATCTCTTCGGACGCTTGATTTGTCGGAAAACTCAAACATTGAAGGACCGTTGCCAAGAAGCTTGGGAATGCTATGCAGCTTGCAGACGGTGAATCTTCCTATTAACAAATTTACTGGTGAGATTACTGATTTCGTTGATAGTTTGTCTGCATGCACAAACAGCAGCTTAGAGAAGCTGGATTTGGGATATAACAGGCTGACAGGAAAACTGCCGGACTCTTTGGGAAATCTTAAAAGCTTAAGATTCCTCATATTGCGGTTTAACTCATTTCAGGGTTCAATCCCCAAATCGATCGGAAAGTTGAAATCTTTGGAGGAGTTGTACATTTCAAATAATCAAATGAGTGGGAGCATCCCTGAAGGTCTTGGGCAGCTCTCGTCGCTGACTGCACTAGATATCTCGGAAAACACATGGGAAGGTTCGATTACAGAAGCTCATTTGATGAAACTTGGAAGCCTTACAGATGTTTCAATATATAAAAATAGCCCAAACATTTCCTTAGTTTTCGACATTAGTTCCGATTGGATACCTCCCTTTAAGCTGAGATACTTGAACATTAGGTCATGCCAACTAGGTCCTAAATTTCCTACATGGCTCAGAAATCAGACTGAGTTGGTCACTTTGGTACTCAACAATGCTAGGATTTCGGATACCATACCGCAGTGGTTTTGGCAGTTGGATTTCCAATTAGATCAACTAGATGTCGCTTATAATCAGCTAAGCGGCAGGGTGCCTAACTCATTACGATTCATCAGTCCTGGCACCGTTGATTTGAGTACAAACCGCTTCGAGGGCCCCCTCCCACTCTGGTCATCAAACATTACCATGTTGTATCTTAGAGATAATCTGTTTTCTGGGCCAATTCCTCGTGACATTAGTGAAGTAATGCCCTCTCTGACGGATCTAGACATTTCTCGGAACTTTTTGAATGGAAGCATTCCCCTGTCCATGGGTAATCTAAGCCAATTAACAACCATGGTTATCTCAAGTAACCTGTTGTCTGGTGAGATTCCTAACTTTTGGGACAGTATACCATCATTGTACATCCTAGATGTGTCGAATAACAGTCTTTCAGGTTCAATCCCACGATCCTTAACTTCTCTTACTTTACTCAGATTCTTGATACTCTCTAGCAACCACCTTTCGGGCAAACTTCCTTCCATGAAAAACTTCACTGACATGAGGAGTCTTGATCTTGGTGAGAACAATTTCTCTGGAGCTATTCCAGCTTCCATAGGAGAAAGCATGCCCTCTTTGTTGATTTTGCGTCTGAGGCTCAACTTGTTTAGCGGAAGCATCCCTTCGCAGTTATGTGGTCTTTCCAATCTCCACATATTGGACCTCTCACACAACAATATCTCCGGAAATGTTCCCCGCTGCATAGGTAAATTAACTGGCTTCAGTTCCGATCTCACAGATAAAGATACAGAAGATTATCTTTACCAGGGAAGATTGAAGGTAGTGGCAAAAGGACGGGTCCTCGAATATAACTCCATCCTTTACCTGGTCAATAGTGTTGATCTCTCAGACAACAACTTGTCAGGAGAGATGCCTGTGGGGCTAACAAGCCTTACAAGGTTAGGCACCTTGAATCTGTCCATGAATCATTTGACAGGAAATATCCCAGCAAAGATTGGAGACTTGGAGCGGATAGAAACTCTTGACCTATCGAGCAACAAATTTTCGGGTCCAATTCCACAGAGCATGGTTTCTTTAACATTTTTGAATCATCTCAACTTGTCATACAACAACTTGTCCGGGAAAATCCCAACAAGCAATCAGTTTGAAACCTTCGATGCGTCCATTTATGAAGGAAATGCCGGTCTTTGTGGGCATCCATTACCAAATTGCCAAGGTGGCAAAGAAACGCCTGAGGTTCCAGGTGGAGATGACGAGGATGATGACAGTAAGCTCGATAAGCTGTGGCTCATATTCAGCATTGTGATAGGTTTCTGTTTCGGGTTCTGGGGAGTTTGCGGGACTTTGGTCATCAAGAAGTCTTGGAGATATGCGTATTTCAACTTCGCTGACAAGGTGTATGCATATGTATTAGCCATTCTGAAGAAAAGATCATAG

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0000003 GO:0001704 GO:0001706 GO:0003006 GO:0005575 GO:0005618 GO:0005623 GO:0005886 GO:0006810 GO:0006833 GO:0006950 GO:0007275 GO:0007369 GO:0007389 GO:0007492 GO:0008104 GO:0008150 GO:0009505 GO:0009531 GO:0009611 GO:0009653 GO:0009790 GO:0009791 GO:0009793 GO:0009798 GO:0009888 GO:0009987 GO:0010154 GO:0010453 GO:0010470 GO:0016020 GO:0022414 GO:0022603 GO:0030104 GO:0030154 GO:0030312 GO:0032501 GO:0032502 GO:0033036 GO:0035987 GO:0042044 GO:0042592 GO:0042659 GO:0044426 GO:0044462 GO:0044464 GO:0045184 GO:0045595 GO:0045995 GO:0048226 GO:0048316 GO:0048598 GO:0048608 GO:0048646 GO:0048731 GO:0048856 GO:0048869 GO:0048878 GO:0050789 GO:0050793 GO:0050794 GO:0050801 GO:0050896 GO:0051179 GO:0051234 GO:0051239 GO:0051302 GO:0055065 GO:0055067 GO:0055075 GO:0055080 GO:0061458 GO:0065001 GO:0065007 GO:0065008 GO:0071944 GO:0090558 GO:0090708 GO:0098771 GO:0099402 GO:1903224 GO:1905392 GO:1905421 GO:2000026 GO:2000067 GO:2000280

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

LRRNT_2 LRR_1 LRR_6 LRR_8

Protein Analysis

744

Amino Acids

81.99

Weight (kDa)

5.31

Isoelectric Point (pI)

35.64

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
LRR_14	PF23598	3 - 86	8.3e-06	Leucine-rich repeat region
LRR_14	PF23598	107 - 260	4.9e-18	Leucine-rich repeat region
LRR_8	PF13855	135 - 188	1.7e-06	Leucine rich repeat
LRR_8	PF13855	446 - 505	1.9e-06	Leucine rich repeat

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0000048)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT2G34930
fragaria_vesca	FvH4_3g12670 FvH4_3g12672 FvH4_3g12740 FvH4_3g12742 FvH4_3g12770 FvH4_3g12770 FvH4_3g12860 FvH4_3g12890 FvH4_3g13431 FvH4_3g13433 FvH4_3g13435 FvH4_3g13470 FvH4_3g13470 FvH4_3g13480 FvH4_3g13562 FvH4_3g13580 FvH4_3g13600 FvH4_3g13600 FvH4_3g13600 FvH4_3g13600 FvH4_3g13600 FvH4_3g13600 FvH4_3g13610 FvH4_3g13620 FvH4_3g13620 FvH4_3g23240 FvH4_3g32910 FvH4_3g35070 FvH4_3g45520 FvH4_5g08430 FvH4_5g08450 FvH4_6g53230 FvH4_6g53300
malus_domestica	MD05G1217600.v1.1 MD05G1217700.v1.1 MD05G1224700.v1.1 MD05G1225100.v1.1 MD05G1225300.v1.1 MD05G1225400.v1.1 MD05G1235900.v1.1 MD05G1236100.v1.1 MD05G1236300.v1.1 MD05G1237200.v1.1 MD05G1241600.v1.1 MD05G1245700.v1.1 MD05G1245800.v1.1 MD05G1245900.v1.1 MD05G1246000.v1.1 MD05G1246100.v1.1 MD05G1246300.v1.1 MD05G1246400.v1.1 MD05G1246500.v1.1 MD05G1248100.v1.1 MD05G1248200.v1.1 MD05G1264300.v1.1 MD05G1275900.v1.1 MD07G1051400.v1.1 MD09G1012600.v1.1 MD09G1012700.v1.1 MD09G1012800.v1.1 MD10G1221400.v1.1 MD10G1221500.v1.1 MD10G1221600.v1.1 MD10G1221900.v1.1 MD10G1222200.v1.1 MD10G1222400.v1.1 MD10G1222500.v1.1 MD10G1222900.v1.1 MD10G1223000.v1.1 MD10G1223100.v1.1 MD10G1223500.v1.1 MD10G1228000.v1.1 MD12G1019600.v1.1 MD12G1020000.v1.1 MD12G1020100.v1.1 MD17G1013200.v1.1 MD17G1013300.v1.1 MD17G1013400.v1.1
prunus_persica	Prupe.1G060500_v2.0.a1 Prupe.1G100100_v2.0.a1 Prupe.3G124000_v2.0.a1 Prupe.3G304400_v2.0.a1 Prupe.4G116800_v2.0.a1 Prupe.4G116900_v2.0.a1 Prupe.4G117000_v2.0.a1 Prupe.4G121800_v2.0.a1 Prupe.4G121900_v2.0.a1 Prupe.4G122000_v2.0.a1 Prupe.4G122100_v2.0.a1 Prupe.4G122200_v2.0.a1 Prupe.4G122300_v2.0.a1 Prupe.4G122500_v2.0.a1 Prupe.4G122600_v2.0.a1 Prupe.4G122800_v2.0.a1 Prupe.4G122900_v2.0.a1 Prupe.4G123000_v2.0.a1 Prupe.4G123100_v2.0.a1 Prupe.4G123200_v2.0.a1 Prupe.4G131500_v2.0.a1 Prupe.4G131600_v2.0.a1 Prupe.7G032500_v2.0.a1 Prupe.7G032900_v2.0.a1 Prupe.7G033000_v2.0.a1 Prupe.7G033100_v2.0.a1 Prupe.7G033300_v2.0.a1 Prupe.7G033600_v2.0.a1 Prupe.7G034600_v2.0.a1 Prupe.7G040200_v2.0.a1 Prupe.7G059200_v2.0.a1
pyrus_communis	pycom05g20580 pycom05g20590 pycom05g20760 pycom05g20800 pycom05g21280 pycom05g21290 pycom05g21820 pycom05g21830 pycom05g22180 pycom05g22190 pycom05g22210 pycom05g22450 pycom05g22460 pycom05g22470 pycom05g22480 pycom05g22490 pycom05g23770 pycom05g23780 pycom05g24050 pycom05g24060 pycom07g03910 pycom10g18700 pycom10g18720 pycom10g18730 pycom10g18740 pycom10g19150 pycom111g01060 pycom12g01660 pycom12g01690 pycom12g01720 pycom12g01740 pycom12g01750 pycom12g01770 pycom12g01810 pycom12g01820 pycom12g01830 pycom12g01840 pycom12g01870 pycom12g01900 pycom17g01060 pycom17g01070
rosa_chinensis	RchiOBHm_Chr1g0315041 RchiOBHm_Chr1g0315051 RchiOBHm_Chr1g0315071 RchiOBHm_Chr1g0315161 RchiOBHm_Chr1g0315211 RchiOBHm_Chr1g0315251 RchiOBHm_Chr1g0315321 RchiOBHm_Chr1g0315391 RchiOBHm_Chr1g0315451 RchiOBHm_Chr1g0315481 RchiOBHm_Chr1g0315551 RchiOBHm_Chr1g0315601 RchiOBHm_Chr1g0315621 RchiOBHm_Chr1g0359221 RchiOBHm_Chr2g0142981 RchiOBHm_Chr2g0143001 RchiOBHm_Chr2g0143061 RchiOBHm_Chr2g0143091 RchiOBHm_Chr2g0175321 RchiOBHm_Chr2g0175341 RchiOBHm_Chr2g0175361 RchiOBHm_Chr2g0175371 RchiOBHm_Chr3g0470491 RchiOBHm_Chr3g0480881 RchiOBHm_Chr3g0485511 RchiOBHm_Chr5g0020741 RchiOBHm_Chr5g0020901 RchiOBHm_Chr5g0020931 RchiOBHm_Chr5g0020941 RchiOBHm_Chr5g0020961 RchiOBHm_Chr5g0020971 RchiOBHm_Chr5g0021451 RchiOBHm_Chr5g0021531 RchiOBHm_Chr5g0021831 RchiOBHm_Chr5g0021841 RchiOBHm_Chr5g0021931 RchiOBHm_Chr5g0021941 RchiOBHm_Chr5g0021981 RchiOBHm_Chr5g0021991 RchiOBHm_Chr5g0022011 RchiOBHm_Chr5g0022181 RchiOBHm_Chr5g0022191 RchiOBHm_Chr5g0022211 RchiOBHm_Chr5g0022221 RchiOBHm_Chr5g0022231 RchiOBHm_Chr5g0022291 RchiOBHm_Chr5g0022301 RchiOBHm_Chr5g0022331 RchiOBHm_Chr5g0022361 RchiOBHm_Chr5g0022371 RchiOBHm_Chr5g0022381 RchiOBHm_Chr5g0022401 RchiOBHm_Chr5g0022431 RchiOBHm_Chr5g0022451 RchiOBHm_Chr5g0022541 RchiOBHm_Chr5g0022591 RchiOBHm_Chr5g0022601 RchiOBHm_Chr5g0022701 RchiOBHm_Chr5g0022741 RchiOBHm_Chr5g0022791 RchiOBHm_Chr5g0022811 RchiOBHm_Chr5g0022851 RchiOBHm_Chr5g0029441 RchiOBHm_Chr5g0041631 RchiOBHm_Chr5g0069391 RchiOBHm_Chr6g0273811 RchiOBHm_Chr6g0273831 RchiOBHm_Chr6g0275331 RchiOBHm_Chr7g0219061
rosa_laevigata	RLG00000002463 RLG00000020007 RLG00000020008 RLG00000022320 RLG00000022321 RLG00000023446 RLG00000030742 RLG00000030743 RLG00000030747 RLG00000032557 RLG00000032564 RLG00000032571 RLG00000032573 RLG00000032574 RLG00000032612 RLG00000032633 RLG00000032636 RLG00000032638 RLG00000032650 RLG00000032651 RLG00000032652 RLG00000032653 RLG00000032655 RLG00000032673 RLG00000032678 RLG00000032769 RLG00000032857 RLG00000033168 RLG00000033465 RLG00000034086 RLG00000034222 RLG00000035290
rosa_multiflora	Rmu_co8143358.1_g000001 Rmu_co8518791.1_g000001 Rmu_sc0000178.1_g000008 Rmu_sc0000178.1_g000014 Rmu_sc0000401.1_g000005 Rmu_sc0000401.1_g000013 Rmu_sc0000401.1_g000017 Rmu_sc0000401.1_g000018 Rmu_sc0000401.1_g000024 Rmu_sc0000401.1_g000025 Rmu_sc0000576.1_g000020 Rmu_sc0001585.1_g000003 Rmu_sc0001585.1_g000005 Rmu_sc0001585.1_g000008 Rmu_sc0001784.1_g000006 Rmu_sc0001784.1_g000011 Rmu_sc0001784.1_g000022 Rmu_sc0001784.1_g000028 Rmu_sc0002052.1_g000004 Rmu_sc0002052.1_g000011 Rmu_sc0002277.1_g000003 Rmu_sc0002277.1_g000006 Rmu_sc0002277.1_g000024 Rmu_sc0002658.1_g000012 Rmu_sc0003512.1_g000004 Rmu_sc0003512.1_g000007 Rmu_sc0004180.1_g000016 Rmu_sc0004180.1_g000029 Rmu_sc0004180.1_g000034 Rmu_sc0005639.1_g000008 Rmu_sc0005639.1_g000023 Rmu_sc0006070.1_g000016 Rmu_sc0006070.1_g000017 Rmu_sc0006966.1_g000021 Rmu_sc0006966.1_g000023 Rmu_sc0007239.1_g000003 Rmu_sc0008460.1_g000010 Rmu_sc0009984.1_g000008 Rmu_sc0010181.1_g000005 Rmu_sc0010181.1_g000010 Rmu_sc0010503.1_g000006 Rmu_sc0011646.1_g000003 Rmu_sc0012984.1_g000011 Rmu_sc0016972.1_g000005 Rmu_sc0016972.1_g000008 Rmu_sc0023070.1_g000003 Rmu_sc0025660.1_g000001 Rmu_ssc0000322.1_g000019
rosa_roxburghii	Rroxscaffold_1G00038860 Rroxscaffold_1G00053490 Rroxscaffold_1G00053500 Rroxscaffold_1G00054230 Rroxscaffold_1G00056460 Rroxscaffold_1G00056470 Rroxscaffold_1G00056480 Rroxscaffold_1G00056500 Rroxscaffold_1G00056510 Rroxscaffold_1G00056620 Rroxscaffold_1G00056690 Rroxscaffold_1G00056710 Rroxscaffold_1G00056720 Rroxscaffold_1G00056730 Rroxscaffold_1G00056740 Rroxscaffold_1G00056750 Rroxscaffold_1G00056760 Rroxscaffold_1G00056870 Rroxscaffold_1G00056900 Rroxscaffold_1G00057120 Rroxscaffold_1G00057560 Rroxscaffold_2G00077430 Rroxscaffold_2G00102160 Rroxscaffold_3G00231420 Rroxscaffold_3G00231430 Rroxscaffold_4G00297230 Rroxscaffold_4G00331570 Rroxscaffold_6G00396700 Rroxscaffold_6G00400940 Rroxscaffold_7G00192740
rosa_rugosa	Rorug01G0004400 Rorug01G0004500 Rorug02G0377600 Rorug02G0378000 Rorug02G0582800 Rorug02G0583400 Rorug03G0187000 Rorug03G0218800 Rorug04G0081200 Rorug05G0062700 Rorug05G0062700 Rorug05G0063100 Rorug05G0063200 Rorug05G0063200 Rorug05G0063200 Rorug05G0067000 Rorug05G0069700 Rorug05G0069900 Rorug05G0070000 Rorug05G0070100 Rorug05G0070300 Rorug05G0070400 Rorug05G0070600 Rorug05G0070600 Rorug05G0072300 Rorug05G0072400 Rorug05G0072500 Rorug05G0072500 Rorug05G0072600.1 Rorug05G0072700 Rorug05G0072800 Rorug05G0072800 Rorug05G0072900 Rorug05G0073000 Rorug05G0073000 Rorug05G0073400 Rorug05G0073400 Rorug05G0073400 Rorug05G0074800 Rorug05G0075000 Rorug05G0114300 Rorug05G0194200 Rorug06G0097800
rosa_samantha	Rh2AG401400 Rh2CG387600 Rh2CG417000 Rh2CG637400 Rh5CG169600 Rh5CG172100 Rh5CG175200 Rh5CG317100 Rh6DG187900
rosa_wichuraiana	Rw1G000750 Rw1G000790 Rw1G000820 Rw1G000860 Rw1G000880 Rw1G000910 Rw2G035180 Rw2G035200 Rw2G035240 Rw2G054370 Rw2G054380 Rw5G013570 Rw5G013580 Rw5G013590 Rw5G013910 Rw5G013980 Rw5G014110 Rw5G014120 Rw5G014280 Rw5G014310 Rw5G014400 Rw5G014420 Rw5G014440 Rw5G014460 Rw5G014480 Rw5G014500 Rw5G014520 Rw5G014530 Rw5G042390

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AanI	TTATAA	1 cut(s)	867
AccB1I	GGYRCC	3 cut(s)	886, 917, 1739
AccB7I	CCANNNNNTGG	1 cut(s)	1492
AccBSI	CCGCTC	1 cut(s)	1804
AccI	GTMKAC	1 cut(s)	1186
AccIII	TCCGGA	1 cut(s)	1517
AciI	CCGC	8 cut(s)	412, 815, 879, 940, 1446, 1531, 1804, 2133
AclWI	GGATC	2 cut(s)	1065, 1239
AcsI	RAATTY	4 cut(s)	4, 263, 737, 1835
AcuI	CTGAAG	2 cut(s)	534, 1540
AfaI	GTAC	4 cut(s)	479, 783, 934, 1199
AfiI	CCNNNNNNNGG	5 cut(s)	946, 1105, 1300, 1492, 1660
AflII	CTTAAG	1 cut(s)	394
AhlI	ACTAGT	1 cut(s)	88
AjnI	CCWGG	5 cut(s)	65, 913, 1599, 1659, 2035
AjuI	GAANNNNNNNTTGG	2 cut(s)	320, 352
Alw21I	GWGCWC	1 cut(s)	130
Alw26I	GTCTC	1 cut(s)	1788
AlwI	GGATC	2 cut(s)	1065, 1239
Aor13HI	TCCGGA	1 cut(s)	1517
AoxI	GGCC	2 cut(s)	949, 1013
ApaI	GGGCCC	1 cut(s)	953
ApeKI	GCWGC	4 cut(s)	231, 318, 526, 1533
ApoI	RAATTY	4 cut(s)	4, 263, 737, 1835
ArsI	GACNNNNNNTTYG	2 cut(s)	157, 189
Asp700I	GAANNNNTTC	2 cut(s)	1325, 1364
AspS9I	GGNCC	8 cut(s)	200, 731, 949, 950, 1013, 1495, 1633, 1844
AsuC2I	CCSGG	1 cut(s)	1915
AsuHPI	GGTGA	5 cut(s)	85, 256, 284, 1172, 1367
AvaII	GGWCC	5 cut(s)	200, 731, 1495, 1633, 1844
AxyI	CCTNAGG	1 cut(s)	2028
BaeGI	GKGCMC	1 cut(s)	953
BanI	GGYRCC	3 cut(s)	886, 917, 1739
BanII	GRGCYC	1 cut(s)	953
BarI	GAAGNNNNNNTAC	2 cut(s)	2162, 2194
BauI	CACGAG	1 cut(s)	1023
Bbv12I	GWGCWC	1 cut(s)	130
BbvI	GCAGC	4 cut(s)	243, 330, 538, 1520
BccI	CCATC	2 cut(s)	1198, 1658
BcgI	CGANNNNNNTGC	1 cut(s)	34
BciT130I	CCWGG	5 cut(s)	67, 915, 1601, 1661, 2037
BciVI	GTATCC	2 cut(s)	675, 799
BcnI	CCSGG	1 cut(s)	1915
BcoDI	GTCTC	1 cut(s)	1788
BcuI	ACTAGT	1 cut(s)	88
BfaI	CTAG	8 cut(s)	89, 548, 728, 795, 854, 1061, 1205, 1287
BfrI	CTTAAG	1 cut(s)	394
BfuI	GTATCC	2 cut(s)	675, 799
BglI	GCCNNNNNGGC	2 cut(s)	1714, 2013
BisI	GCNGC	5 cut(s)	232, 319, 527, 880, 1534
BlpI	GCTNAGC	1 cut(s)	875
BlsI	GCNGC	5 cut(s)	233, 320, 528, 881, 1535
Bme1390I	CCNGG	6 cut(s)	67, 915, 1601, 1661, 1915, 2037
Bme18I	GGWCC	5 cut(s)	200, 731, 1495, 1633, 1844
BmgT120I	GGNCC	8 cut(s)	200, 731, 949, 950, 1013, 1495, 1633, 1844
BmiI	GGNNCC	8 cut(s)	888, 919, 951, 952, 1634, 1741, 1845, 2034
BmrFI	CCNGG	6 cut(s)	67, 915, 1601, 1661, 1915, 2037
BmsI	GCATC	6 cut(s)	20, 516, 1461, 1695, 1942, 1999
BoxI	GACNNNNGTC	1 cut(s)	2141
BpmI	CTGGAG	1 cut(s)	1392
Bpu1102I	GCTNAGC	1 cut(s)	875
BpuEI	CTTGAG	1 cut(s)	1126
BpuMI	CCSGG	1 cut(s)	1915
Bsa29I	ATCGAT	1 cut(s)	446
BsaJI	CCNNGG	6 cut(s)	65, 121, 1104, 1131, 1600, 2008
BsaWI	WCCGGW	1 cut(s)	1517
BsaXI	ACNNNNNCTCC	6 cut(s)	46, 76, 461, 491, 1499, 1529
Bsc4I	CCNNNNNNNGG	5 cut(s)	946, 1105, 1300, 1492, 1660
Bse118I	RCCGGY	1 cut(s)	1976
Bse1I	ACTGG	2 cut(s)	274, 1555
Bse21I	CCTNAGG	1 cut(s)	2028
BseAI	TCCGGA	1 cut(s)	1517
BseBI	CCWGG	5 cut(s)	67, 915, 1601, 1661, 2037
BseCI	ATCGAT	1 cut(s)	446
BseDI	CCNNGG	6 cut(s)	65, 121, 1104, 1131, 1600, 2008
BseGI	GGATG	7 cut(s)	11, 507, 1200, 1452, 1650, 1990, 2059
BseLI	CCNNNNNNNGG	5 cut(s)	946, 1105, 1300, 1492, 1660
BseMII	CTCAG	7 cut(s)	689, 756, 766, 1282, 1418, 1695, 2019
BseNI	ACTGG	2 cut(s)	274, 1555
BseRI	GAGGAG	2 cut(s)	485, 1354
BseSI	GKGCMC	1 cut(s)	953
BseXI	GCAGC	4 cut(s)	243, 330, 538, 1520
BseYI	CCCAGC	1 cut(s)	1780
BsgI	GTGCAG	1 cut(s)	528
Bsh1285I	CGRYCG	1 cut(s)	450
BshFI	GGCC	2 cut(s)	951, 1015
BshNI	GGYRCC	3 cut(s)	886, 917, 1739
BshVI	ATCGAT	1 cut(s)	446
BsiEI	CGRYCG	1 cut(s)	450
BsiHKAI	GWGCWC	1 cut(s)	130
BsiSI	CCGG	4 cut(s)	368, 1518, 1914, 1977
BslFI	GGGAC	2 cut(s)	1193, 2149
BslI	CCNNNNNNNGG	5 cut(s)	946, 1105, 1300, 1492, 1660
BsmAI	GTCTC	1 cut(s)	1788
BsmFI	GGGAC	2 cut(s)	1193, 2149
BsmI	GAATGC	2 cut(s)	228, 1092
BsnI	GGCC	2 cut(s)	951, 1015
Bsp120I	GGGCCC	1 cut(s)	949
Bsp1286I	GDGCHC	2 cut(s)	130, 953
Bsp13I	TCCGGA	1 cut(s)	1517
Bsp1407I	TGTACA	2 cut(s)	477, 1197
Bsp143I	GATC	9 cut(s)	28, 447, 847, 1057, 1244, 1348, 1564, 1675, 2225
Bsp1720I	GCTNAGC	1 cut(s)	875
Bsp19I	CCATGG	2 cut(s)	1104, 1131
BspACI	CCGC	8 cut(s)	412, 815, 879, 940, 1446, 1531, 1804, 2133
BspANI	GGCC	2 cut(s)	951, 1015
BspCNI	CTCAG	7 cut(s)	690, 757, 765, 1281, 1419, 1694, 2020
BspDI	ATCGAT	1 cut(s)	446
BspEI	TCCGGA	1 cut(s)	1517
BspLI	GGNNCC	8 cut(s)	888, 919, 951, 952, 1634, 1741, 1845, 2034
BspPI	GGATC	2 cut(s)	1065, 1239
BspT107I	GGYRCC	3 cut(s)	886, 917, 1739
BspTI	CTTAAG	1 cut(s)	394
BsrBI	CCGCTC	1 cut(s)	1804
BsrFI	RCCGGY	1 cut(s)	1976
BsrGI	TGTACA	2 cut(s)	477, 1197
BsrI	ACTGG	2 cut(s)	274, 1555
BssAI	RCCGGY	1 cut(s)	1976
BssECI	CCNNGG	6 cut(s)	65, 121, 1104, 1131, 1600, 2008
BssMI	GATC	9 cut(s)	28, 447, 847, 1057, 1244, 1348, 1564, 1675, 2225
BssNAI	GTATAC	1 cut(s)	1187
BssSI	CACGAG	1 cut(s)	1023
BssT1I	CCWWGG	3 cut(s)	1104, 1131, 2008
Bst1107I	GTATAC	1 cut(s)	1187
Bst2BI	CACGAG	1 cut(s)	1023
Bst2UI	CCWGG	5 cut(s)	67, 915, 1601, 1661, 2037
Bst4CI	ACNGT	6 cut(s)	204, 244, 922, 1184, 1223, 2063
Bst6I	CTCTTC	1 cut(s)	165
BstAFI	CTTAAG	1 cut(s)	394
BstAUI	TGTACA	2 cut(s)	477, 1197
BstC8I	GCNNGC	3 cut(s)	236, 307, 1403
BstDSI	CCRYGG	3 cut(s)	121, 1104, 1131
BstF5I	GGATG	7 cut(s)	11, 507, 1200, 1452, 1650, 1990, 2059
BstKTI	GATC	9 cut(s)	31, 450, 850, 1060, 1247, 1351, 1567, 1678, 2228
BstMAI	GTCTC	1 cut(s)	1788
BstMBI	GATC	9 cut(s)	28, 447, 847, 1057, 1244, 1348, 1564, 1675, 2225
BstMCI	CGRYCG	1 cut(s)	450
BstMWI	GCNNNNNNNGC	8 cut(s)	315, 535, 948, 1382, 1429, 1714, 2013, 2074
BstNI	CCWGG	5 cut(s)	67, 915, 1601, 1661, 2037
BstNSI	RCATGY	2 cut(s)	309, 1405
BstPAI	GACNNNNGTC	1 cut(s)	2141
BstSCI	CCNGG	6 cut(s)	65, 913, 1599, 1659, 1913, 2035
BstSLI	GKGCMC	1 cut(s)	953
BstV1I	GCAGC	4 cut(s)	243, 330, 538, 1520
BstX2I	RGATCY	1 cut(s)	1057
BstYI	RGATCY	1 cut(s)	1057
BstZ17I	GTATAC	1 cut(s)	1187
Bsu15I	ATCGAT	1 cut(s)	446
Bsu36I	CCTNAGG	1 cut(s)	2028
BsuI	GTATCC	2 cut(s)	675, 799
BsuRI	GGCC	2 cut(s)	951, 1015
BsuTUI	ATCGAT	1 cut(s)	446
BtgI	CCRYGG	3 cut(s)	121, 1104, 1131
BtsCI	GGATG	7 cut(s)	11, 507, 1200, 1452, 1650, 1990, 2059
BtsI	GCAGTG	1 cut(s)	824
BtsIMutI	CAGTG	2 cut(s)	824, 1329
Cac8I	GCNNGC	3 cut(s)	236, 307, 1403
Cfr10I	RCCGGY	1 cut(s)	1976
Cfr13I	GGNCC	8 cut(s)	200, 731, 949, 950, 1013, 1495, 1633, 1844
ClaI	ATCGAT	1 cut(s)	446
CseI	GACGC	3 cut(s)	175, 1412, 1944
CsiI	ACCWGGT	1 cut(s)	1659
Csp6I	GTAC	4 cut(s)	478, 782, 933, 1198
CviQI	GTAC	4 cut(s)	478, 782, 933, 1198
DpnI	GATC	9 cut(s)	30, 449, 849, 1059, 1246, 1350, 1566, 1677, 2227
DpnII	GATC	9 cut(s)	28, 447, 847, 1057, 1244, 1348, 1564, 1675, 2225
Eam1104I	CTCTTC	1 cut(s)	165
EarI	CTCTTC	1 cut(s)	165
Eco130I	CCWWGG	3 cut(s)	1104, 1131, 2008
Eco24I	GRGCYC	1 cut(s)	953
Eco32I	GATATC	1 cut(s)	553
Eco47I	GGWCC	5 cut(s)	200, 731, 1495, 1633, 1844
Eco57I	CTGAAG	2 cut(s)	534, 1540
Eco81I	CCTNAGG	1 cut(s)	2028
EcoO109I	RGGNCCY	4 cut(s)	731, 949, 950, 1633
EcoRII	CCWGG	5 cut(s)	65, 913, 1599, 1659, 2035
EcoRV	GATATC	1 cut(s)	553
EcoT14I	CCWWGG	3 cut(s)	1104, 1131, 2008
EcoT22I	ATGCAT	1 cut(s)	2200
EcoT38I	GRGCYC	1 cut(s)	953
ErhI	CCWWGG	3 cut(s)	1104, 1131, 2008
FalI	AAGNNNNNCTT	4 cut(s)	1441, 1473, 1578, 1610
FaqI	GGGAC	2 cut(s)	1193, 2149
FauI	CCCGC	2 cut(s)	1538, 2126
FauNDI	CATATG	1 cut(s)	2200
FblI	GTMKAC	1 cut(s)	1186
Fnu4HI	GCNGC	5 cut(s)	232, 319, 527, 880, 1534
FokI	GGATG	6 cut(s)	494, 1187, 1439, 1637, 1977, 2066
FriOI	GRGCYC	1 cut(s)	953
Fsp4HI	GCNGC	5 cut(s)	232, 319, 527, 880, 1534
FspBI	CTAG	8 cut(s)	89, 548, 728, 795, 854, 1061, 1205, 1287
GluI	GCNGC	5 cut(s)	232, 319, 527, 880, 1534
GsaI	CCCAGC	1 cut(s)	1784
GsuI	CTGGAG	1 cut(s)	1392
HaeIII	GGCC	2 cut(s)	951, 1015
HapII	CCGG	4 cut(s)	368, 1518, 1914, 1977
HgaI	GACGC	3 cut(s)	175, 1412, 1944
HindIII	AAGCTT	2 cut(s)	214, 391
HpaII	CCGG	4 cut(s)	368, 1518, 1914, 1977
HphI	GGTGA	5 cut(s)	85, 256, 284, 1172, 1367
Hpy166II	GTNNAC	1 cut(s)	1187
Hpy8I	GTNNAC	1 cut(s)	1187
Hpy99I	CGWCG	1 cut(s)	538
HpyAV	CCTTC	8 cut(s)	191, 509, 566, 1323, 1467, 1606, 1957, 1961
HpyCH4III	ACNGT	6 cut(s)	204, 244, 922, 1184, 1223, 2063
HpyCH4V	TGCA	8 cut(s)	106, 231, 238, 305, 309, 545, 1536, 2198
HpyF10VI	GCNNNNNNNGC	8 cut(s)	315, 535, 948, 1382, 1429, 1714, 2013, 2074
Kpn2I	TCCGGA	1 cut(s)	1517
Kzo9I	GATC	9 cut(s)	28, 447, 847, 1057, 1244, 1348, 1564, 1675, 2225
LmnI	GCTCC	4 cut(s)	125, 504, 1373, 1801
Lsp1109I	GCAGC	4 cut(s)	243, 330, 538, 1520
LweI	GCATC	6 cut(s)	20, 516, 1461, 1695, 1942, 1999
MabI	ACCWGGT	1 cut(s)	1659
MaeI	CTAG	8 cut(s)	89, 548, 728, 795, 854, 1061, 1205, 1287
MaeIII	GTNAC	4 cut(s)	91, 772, 1025, 1145
MalI	GATC	9 cut(s)	30, 449, 849, 1059, 1246, 1350, 1566, 1677, 2227
MbiI	CCGCTC	1 cut(s)	1804
MboI	GATC	9 cut(s)	28, 447, 847, 1057, 1244, 1348, 1564, 1675, 2225
MboII	GAAGA	5 cut(s)	152, 242, 1598, 1617, 2230
MflI	RGATCY	1 cut(s)	1057
MhlI	GDGCHC	2 cut(s)	130, 953
MlyI	GAGTC	2 cut(s)	365, 1351
MmeI	TCCRAC	2 cut(s)	159, 813
Mph1103I	ATGCAT	1 cut(s)	2200
MroI	TCCGGA	1 cut(s)	1517
MroXI	GAANNNNTTC	2 cut(s)	1325, 1364
MseI	TTAA	9 cut(s)	258, 387, 395, 417, 693, 1124, 1250, 1547, 1871
MslI	CAYNNNNRTG	2 cut(s)	980, 1334
MspA1I	CMGCKG	1 cut(s)	1533
MspCI	CTTAAG	1 cut(s)	394
MspI	CCGG	4 cut(s)	368, 1518, 1914, 1977
MspR9I	CCNGG	6 cut(s)	67, 915, 1601, 1661, 1915, 2037
Mva1269I	GAATGC	2 cut(s)	228, 1092
MvaI	CCWGG	5 cut(s)	67, 915, 1601, 1661, 2037
MwoI	GCNNNNNNNGC	8 cut(s)	315, 535, 948, 1382, 1429, 1714, 2013, 2074
NciI	CCSGG	1 cut(s)	1915
NcoI	CCATGG	2 cut(s)	1104, 1131
NdeI	CATATG	1 cut(s)	2200
NdeII	GATC	9 cut(s)	28, 447, 847, 1057, 1244, 1348, 1564, 1675, 2225
NlaIV	GGNNCC	8 cut(s)	888, 919, 951, 952, 1634, 1741, 1845, 2034
NmuCI	GTSAC	3 cut(s)	91, 772, 1025
NsiI	ATGCAT	1 cut(s)	2200
NspI	RCATGY	2 cut(s)	309, 1405
PaeI	GCATGC	2 cut(s)	309, 1405
PctI	GAATGC	2 cut(s)	228, 1092
PdmI	GAANNNNTTC	2 cut(s)	1325, 1364
PfeI	GAWTC	8 cut(s)	247, 399, 903, 1165, 1272, 1747, 1759, 1882
PflMI	CCANNNNNTGG	1 cut(s)	1492
PfoI	TCCNGGA	1 cut(s)	1913
PkrI	GCNGC	5 cut(s)	233, 320, 528, 881, 1535
Ple19I	CGATCG	1 cut(s)	450
PleI	GAGTC	2 cut(s)	365, 1350
PpsI	GAGTC	2 cut(s)	365, 1350
PpuMI	RGGWCCY	2 cut(s)	731, 1633
PshAI	GACNNNNGTC	1 cut(s)	2141
PsiI	TTATAA	1 cut(s)	867
Psp5II	RGGWCCY	2 cut(s)	731, 1633
Psp6I	CCWGG	5 cut(s)	65, 913, 1599, 1659, 2035
PspFI	CCCAGC	1 cut(s)	1780
PspGI	CCWGG	5 cut(s)	65, 913, 1599, 1659, 2035
PspN4I	GGNNCC	8 cut(s)	888, 919, 951, 952, 1634, 1741, 1845, 2034
PspOMI	GGGCCC	1 cut(s)	949
PspPI	GGNCC	8 cut(s)	200, 731, 949, 950, 1013, 1495, 1633, 1844
PspPPI	RGGWCCY	2 cut(s)	731, 1633
PsuI	RGATCY	1 cut(s)	1057
PvuI	CGATCG	1 cut(s)	450
RsaI	GTAC	4 cut(s)	479, 783, 934, 1199
RsaNI	GTAC	4 cut(s)	478, 782, 933, 1198
RseI	CAYNNNNRTG	2 cut(s)	980, 1334
SaqAI	TTAA	9 cut(s)	258, 387, 395, 417, 693, 1124, 1250, 1547, 1871
SatI	GCNGC	5 cut(s)	232, 319, 527, 880, 1534
Sau3AI	GATC	9 cut(s)	28, 447, 847, 1057, 1244, 1348, 1564, 1675, 2225
Sau96I	GGNCC	8 cut(s)	200, 731, 949, 950, 1013, 1495, 1633, 1844
SchI	GAGTC	2 cut(s)	365, 1351
ScrFI	CCNGG	6 cut(s)	67, 915, 1601, 1661, 1915, 2037
SduI	GDGCHC	2 cut(s)	130, 953
SexAI	ACCWGGT	1 cut(s)	1659
SfaNI	GCATC	6 cut(s)	20, 516, 1461, 1695, 1942, 1999
SinI	GGWCC	5 cut(s)	200, 731, 1495, 1633, 1844
SmiMI	CAYNNNNRTG	2 cut(s)	980, 1334
SmlI	CTYRAG	2 cut(s)	394, 1141
SmoI	CTYRAG	2 cut(s)	394, 1141
SpeI	ACTAGT	1 cut(s)	88
SphI	GCATGC	2 cut(s)	309, 1405
SsiI	CCGC	8 cut(s)	412, 815, 879, 940, 1446, 1531, 1804, 2133
SspMI	CTAG	8 cut(s)	89, 548, 728, 795, 854, 1061, 1205, 1287
StyD4I	CCNGG	6 cut(s)	65, 913, 1599, 1659, 1913, 2035
StyI	CCWWGG	3 cut(s)	1104, 1131, 2008
TaaI	ACNGT	6 cut(s)	204, 244, 922, 1184, 1223, 2063
TatI	WGTACW	3 cut(s)	477, 932, 1197
TauI	GCSGC	1 cut(s)	882
TfiI	GAWTC	8 cut(s)	247, 399, 903, 1165, 1272, 1747, 1759, 1882
Tru1I	TTAA	9 cut(s)	258, 387, 395, 417, 693, 1124, 1250, 1547, 1871
Tru9I	TTAA	9 cut(s)	258, 387, 395, 417, 693, 1124, 1250, 1547, 1871
TscAI	CASTG	2 cut(s)	824, 1336
TseFI	GTSAC	3 cut(s)	91, 772, 1025
TseI	GCWGC	4 cut(s)	231, 318, 526, 1533
Tsp45I	GTSAC	3 cut(s)	91, 772, 1025
TspDTI	ATGAA	6 cut(s)	17, 614, 895, 1334, 1772, 1980
TspGWI	ACGGA	2 cut(s)	138, 1070
TspRI	CASTG	2 cut(s)	824, 1336
Van91I	CCANNNNNTGG	1 cut(s)	1492
Vha464I	CTTAAG	1 cut(s)	394
VpaK11BI	GGWCC	5 cut(s)	200, 731, 1495, 1633, 1844
XapI	RAATTY	4 cut(s)	4, 263, 737, 1835
XbaI	TCTAGA	1 cut(s)	1060
XceI	RCATGY	2 cut(s)	309, 1405
XcmI	CCANNNNNNNNNTGG	1 cut(s)	1657
XmiI	GTMKAC	1 cut(s)	1186
XmnI	GAANNNNTTC	2 cut(s)	1325, 1364
XspI	CTAG	8 cut(s)	89, 548, 728, 795, 854, 1061, 1205, 1287
Zsp2I	ATGCAT	1 cut(s)	2200

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.