RchiOBHm_Chr2g0175371

LRR receptor-like serine threonine-protein kinase

Basic Information

Type: gene
Biological Identity
rosa_chinensis
2
Physical Location & Seq
Forward (+)
87607562 .. 87617977
10416 bp
Loading structure...
UTR
Exon/CDS
Intron
PRQ54246

Sequence Viewer

Length: 4041 bp
ATGAACCATCTGGCAGGAATGATCCCATCGAAAATTGGAAACATGGAGTTGATAGAAACTCTTGATCTTTCAATAAACAATCTGTCAGGTTCCATTCCACCGAGTATGGTTTCATTGACATTCTTGACTCATCTAAACCTGTCATACAATAATCTTTCAAGGAAAATCCCAACAGCTAACCAGTTTAAAACTCTGGTTGATCCATCAATCTATGAAGGCAATGATGCTCTTTGTGGGTATCCATTACTAACTGATTGCAAAGGCGATGAACCTCCTCAGCTTCCAAGTGAAGATGGTGAAGAAGATGACAGCAAGCTATGGTTAATCATCAGCGTGGTGATAGGTTTCATTACAGGGTTCTGGGGAGTTTTTGGGAGTTTGGTCATCAAGAAGTTTGTGGGTTGGCAGTTGGTGGGGATTCCGTTGGCTTCAAGGCAAGCAGTGACCTCCGACGTACGTAGACGCAGTGAGCATGGCGGTGTAGGCGACTGTTCATGTATGGGTATGGTATGGGCGCGTTCATTCTATGGGTCGGCGATTGGTGGTGCAGGCGACCTCTTCTGGCCGGTTAACTCCCAATCGTGTGGCGGCATGGCGGACACTCGATGCGTCCACGGCAGCAGGGACGAAGGTCGAGATGCGGTGGGTGCTTGCAAACGACCTAGTGGGCCTTGGGCTAAAGTTAATATCTTGGATCTGGGCCTGAGTTTAAGTGGGAGGACAATTGCCGGCCTGGTGGTCCACTCCTATGAGTTTGTGGTCTTCGATCCCATTTCGTTTGTTATTGACATTAGAAGGACCCAGATTTGGGATCCGAGTGGAATCTGCCAAGGATTCCGGATCTGGGATCCAAGAGGGAGTTGGGCTTGGGCTGCGTCCCACTATGTTAATGTGGACTGCATGAATATTGAGAAGAAAGCTCTTCTCAAACTCAAAGACGGCCTTACAGATCCTTCTGACCGGCTTTCGTCTTGGGTAGGAGAGGATTGCTGCAAATGGAGAGGTGTAGGCTGCAACAACACAACTGGACGTGTGGAAAGCCTTAATCTTCGCAACTCATATTCAGATGATTTGGACAGTGATGTTGGTACACTTCATGCTTTAGGAGGTGAGATCAATCCTTCTTTGCTTGATTTGAAAGACATTGTTTACTTGGATTTGAGCATGAATAACTTTGGAGGTATCAAACTTCCAAGTTTCATTGGATCACTAGAGAAATTAAAATATCTCAATATATCTCGTGCATCTTTTGGTGGTGTCATTCCACCCAATCTTGGAAACCTTTCAAGATTGCTCTATCTTGATCTCAGTTATTACCTTGTTGAAGCAATTGAGAATGATCTCAGATGGCTTCCTAGTCTTTCTTCCTTAAAGTACCTTGACTTAGGAGGAGTGGACCTTACCAAGACTGCAAGCTATTGGCTTCCCACTGTTAACATGCTCCCTTCACTTGTTGAACTGCATTTGTCCACTTGTGGACTTTCCATTCTTCCTCCCACTCTTCCATACATTAACTTTACATCCCTCTCGGTTCTTGATCTCTCTAGCAATGGTTTTAACTCCACCATACCTCACTGGTTGTTCAATCTGACTGAACTAGTCCACCTTGACCTAAAGTTTAATAGTCTCCACGGAATGCTTCCTGAAAGATTTGGTATGTTGACTTTTCTCAAGACACTTGATTTGTCAGAGAATTCAAACATTGAAAGTCGGTTGCCAAGAAACTTGGGACTGTTATGCAATTTGCAGACACTAAAACTTAGTGTCAACAAAATTAGTGGTGAGATTACTGAGTTCCTAGACAGTTTGTCTGGATGTGCAAACATCACCTTAGAGACGTTGGATTTAGGATATAACAATCTGTCAGGAAATCTGCCTAATTCTTTGGGATATCTTAAAAGCTTAAGATACCTCAAATTGTGGTACAATTCATTTCATGGCAGAATCCCAGAATCTATTGGAAACTTGACATCTTTGGAGAACTTATACCTGACTAAGAATCAGATGAGTGGGGCCATCCCAGAAAGTTTTGGGCAGCTCTCATCGCTGGTTGCACTAGAAATCAATGATAACAAATGGGAAGGTGTCGTAACAGAAGCACATTTTGTCAAACTCCGAAACTTAGAAGAGGTGTCAATTAGAAAAGATTCCTCAAACATTTCCTTAATTTTCAACATAAGTTCTGACTGGATACCTCCTTTTAAATTGAGATACTTGAGCATCAGCTCATGCCAACTGGGTCCGAAATTTCCTACATGGCTCAGAAATCAGACTGAGCTGGTCATAGTGGGACTCATAAATGCTAGAATTTCAGACATCATACCAGATTGGTTTTGGCAGTTGGATTTGCTTTTAGATGATCTAGATTTCTCTAATAATCAACTAAGTGGCAGGGTACCTAACTCCTTACGATTCAGCTTGAGGGGCATTGCTGATTTGAGTTCAAACCACTTCGCTGGGCCTCTCCTGCTCTGGTCATCAAACATTTCTGGTCTGTATCTCAATGATAATCTATTTTCAGGGCCAATTCCTCACGACCTTGGTGAAGTGATGCCTTTGGTAGAAGATTTAGACATCTCTAGGAACTCTCTCACTGGTAGGATTCCACTGTCTATTGGTAATCTAAGCCGATTAACAACCCTGGTTATCTCAAATAACCACTTGTCTGGTGAAGTTCCAAATTTTTGGAACAGTCTGTCCGAAGTCTATATTGTAGATATGTCGAACAACGGTCTATCAGGAGCATTGCCAATATCCATGGGTTTCCTTAGTACACTCAGATTCTTGATACTTTCAAACAACAAATTCTCAGGCAAACTGCCTTTACTGAAAAACTGCACTGGCATGAAGAGTCTTGATCTTGGGGAGAATAAGTTTTCTGGAAACATTCCAGCCTGGATAGGAGAAAGCATGCTCTCCTTGTGGATTTTACGCCTGAGTTCCAACTTATTCACTGGACACATTCCTTCACAGTTATGTGGCCTTTCCAATCTTCACATACTGGACCTCTCAAACAATGATCTTGTTGGTCACATTCCTCTCTGTGTGGGCAATTTGAGTGGTTTGAAAATATCTGAAGCCACAGATACAGATACAGCATTCCTTTACCAGGGAGAATTGGAGGTAGTTTCAAAAGGAAGAGTGCTTCAATATGACACCATCCTTTACCTTGTTAATAGCCTAGACCTCTCAAACAATAACTTATCAGGAGAGCTTCCTGTGGAGCTAACAAGCCTTATAATGCTGGGAACCTTGAATTTGTCCATGAATCATCTCACAGGTATAATCCCTGAAAAGATTGGGAACTTGAAATCGATAGAAACTCTTGATCTTTCGATGAACAAACTTTCGGGTTCCATTCCACAGAGTATGGTTTCTTTGACATTTGTGACTCATCTAAACCTGTCGCACAACAACTTATCCGGGAAAATCCCAACAAGCAACCAGTTCAACAGCTTGATTGATCCATCAATTTATCAAGGCAATGCTGGTCTTTGTGGCAGTCCGTTACCAACTCCTTGCCGAGACAATGAAGAAACACCTCAGGTTCCAAGAGAAGATGGAGAAGGAGATGATGGTAAATCTGAAAAGGTATGGTTAATGATCAGCATAGCAATAGGTTTCATATTGGGGTTCTGGGTGGTGGTTGGGAGTTTGGTCATCAACAAGACTTGGAGATATGCCTATTTTCGCTTCCTTGACAGAATGAAGTATGCTGATCAGCATATACTATCAAAGTTGGGCTTTAATCCTATAAATCAGTTGGATTTTCTATTAGATGAACTAGATGTTTCTTCTAATCAACTAAGAGGCAGAGTGCCTAACACATTAAGATTCAGCTATCTTGCCACTTTTGATTTGAGTTCAAACCGCTTTGATGGGCCCCTTTCACTCTGGTCATCCAATATTACTAACTTGTTTCTTAGAGATAATCTATTTTCTGGCCCAATTCCTCGTAACTTTGGTCCAATAATGTCCAAGCTGTGGATTTTAGACAATTCTAGTAACTCTGACTGGAAAAATTCGCTCATCCTTTGGTAA

Protein Analysis

1346

Amino Acids

148.8

Weight (kDa)

5.32

Isoelectric Point (pI)

35.75

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
LRRNT_2 PF08263 304 - 339 4.1e-12 Leucine rich repeat N-terminal domain
LRR_14 PF23598 501 - 592 2.8e-07 Leucine-rich repeat region
LRR_14 PF23598 611 - 757 3e-16 Leucine-rich repeat region
LRR_8 PF13855 1083 - 1140 1.8e-08 Leucine rich repeat
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready

Orthologous Genes (Group: OG0000048)

Species Orthologous Gene IDs
arabidopsis_thaliana AT2G34930
fragaria_vesca FvH4_3g12670 FvH4_3g12672 FvH4_3g12740 FvH4_3g12742 FvH4_3g12770 FvH4_3g12770 FvH4_3g12860 FvH4_3g12890 FvH4_3g13431 FvH4_3g13433 FvH4_3g13435 FvH4_3g13470 FvH4_3g13470 FvH4_3g13480 FvH4_3g13562 FvH4_3g13580 FvH4_3g13600 FvH4_3g13600 FvH4_3g13600 FvH4_3g13600 FvH4_3g13600 FvH4_3g13600 FvH4_3g13610 FvH4_3g13620 FvH4_3g13620 FvH4_3g23240 FvH4_3g32910 FvH4_3g35070 FvH4_3g45520 FvH4_5g08430 FvH4_5g08450 FvH4_6g53230 FvH4_6g53300
malus_domestica MD05G1217600.v1.1 MD05G1217700.v1.1 MD05G1224700.v1.1 MD05G1225100.v1.1 MD05G1225300.v1.1 MD05G1225400.v1.1 MD05G1235900.v1.1 MD05G1236100.v1.1 MD05G1236300.v1.1 MD05G1237200.v1.1 MD05G1241600.v1.1 MD05G1245700.v1.1 MD05G1245800.v1.1 MD05G1245900.v1.1 MD05G1246000.v1.1 MD05G1246100.v1.1 MD05G1246300.v1.1 MD05G1246400.v1.1 MD05G1246500.v1.1 MD05G1248100.v1.1 MD05G1248200.v1.1 MD05G1264300.v1.1 MD05G1275900.v1.1 MD07G1051400.v1.1 MD09G1012600.v1.1 MD09G1012700.v1.1 MD09G1012800.v1.1 MD10G1221400.v1.1 MD10G1221500.v1.1 MD10G1221600.v1.1 MD10G1221900.v1.1 MD10G1222200.v1.1 MD10G1222400.v1.1 MD10G1222500.v1.1 MD10G1222900.v1.1 MD10G1223000.v1.1 MD10G1223100.v1.1 MD10G1223500.v1.1 MD10G1228000.v1.1 MD12G1019600.v1.1 MD12G1020000.v1.1 MD12G1020100.v1.1 MD17G1013200.v1.1 MD17G1013300.v1.1 MD17G1013400.v1.1
prunus_persica Prupe.1G060500_v2.0.a1 Prupe.1G100100_v2.0.a1 Prupe.3G124000_v2.0.a1 Prupe.3G304400_v2.0.a1 Prupe.4G116800_v2.0.a1 Prupe.4G116900_v2.0.a1 Prupe.4G117000_v2.0.a1 Prupe.4G121800_v2.0.a1 Prupe.4G121900_v2.0.a1 Prupe.4G122000_v2.0.a1 Prupe.4G122100_v2.0.a1 Prupe.4G122200_v2.0.a1 Prupe.4G122300_v2.0.a1 Prupe.4G122500_v2.0.a1 Prupe.4G122600_v2.0.a1 Prupe.4G122800_v2.0.a1 Prupe.4G122900_v2.0.a1 Prupe.4G123000_v2.0.a1 Prupe.4G123100_v2.0.a1 Prupe.4G123200_v2.0.a1 Prupe.4G131500_v2.0.a1 Prupe.4G131600_v2.0.a1 Prupe.7G032500_v2.0.a1 Prupe.7G032900_v2.0.a1 Prupe.7G033000_v2.0.a1 Prupe.7G033100_v2.0.a1 Prupe.7G033300_v2.0.a1 Prupe.7G033600_v2.0.a1 Prupe.7G034600_v2.0.a1 Prupe.7G040200_v2.0.a1 Prupe.7G059200_v2.0.a1
pyrus_communis pycom05g20580 pycom05g20590 pycom05g20760 pycom05g20800 pycom05g21280 pycom05g21290 pycom05g21820 pycom05g21830 pycom05g22180 pycom05g22190 pycom05g22210 pycom05g22450 pycom05g22460 pycom05g22470 pycom05g22480 pycom05g22490 pycom05g23770 pycom05g23780 pycom05g24050 pycom05g24060 pycom07g03910 pycom10g18700 pycom10g18720 pycom10g18730 pycom10g18740 pycom10g19150 pycom111g01060 pycom12g01660 pycom12g01690 pycom12g01720 pycom12g01740 pycom12g01750 pycom12g01770 pycom12g01810 pycom12g01820 pycom12g01830 pycom12g01840 pycom12g01870 pycom12g01900 pycom17g01060 pycom17g01070
rosa_chinensis RchiOBHm_Chr1g0315041 RchiOBHm_Chr1g0315051 RchiOBHm_Chr1g0315071 RchiOBHm_Chr1g0315161 RchiOBHm_Chr1g0315211 RchiOBHm_Chr1g0315251 RchiOBHm_Chr1g0315321 RchiOBHm_Chr1g0315391 RchiOBHm_Chr1g0315451 RchiOBHm_Chr1g0315481 RchiOBHm_Chr1g0315551 RchiOBHm_Chr1g0315601 RchiOBHm_Chr1g0315621 RchiOBHm_Chr1g0359221 RchiOBHm_Chr2g0142981 RchiOBHm_Chr2g0143001 RchiOBHm_Chr2g0143061 RchiOBHm_Chr2g0143091 RchiOBHm_Chr2g0175321 RchiOBHm_Chr2g0175341 RchiOBHm_Chr2g0175361 RchiOBHm_Chr2g0175371 RchiOBHm_Chr3g0470491 RchiOBHm_Chr3g0480881 RchiOBHm_Chr3g0485511 RchiOBHm_Chr5g0020741 RchiOBHm_Chr5g0020901 RchiOBHm_Chr5g0020931 RchiOBHm_Chr5g0020941 RchiOBHm_Chr5g0020961 RchiOBHm_Chr5g0020971 RchiOBHm_Chr5g0021451 RchiOBHm_Chr5g0021531 RchiOBHm_Chr5g0021831 RchiOBHm_Chr5g0021841 RchiOBHm_Chr5g0021931 RchiOBHm_Chr5g0021941 RchiOBHm_Chr5g0021981 RchiOBHm_Chr5g0021991 RchiOBHm_Chr5g0022011 RchiOBHm_Chr5g0022181 RchiOBHm_Chr5g0022191 RchiOBHm_Chr5g0022211 RchiOBHm_Chr5g0022221 RchiOBHm_Chr5g0022231 RchiOBHm_Chr5g0022291 RchiOBHm_Chr5g0022301 RchiOBHm_Chr5g0022331 RchiOBHm_Chr5g0022361 RchiOBHm_Chr5g0022371 RchiOBHm_Chr5g0022381 RchiOBHm_Chr5g0022401 RchiOBHm_Chr5g0022431 RchiOBHm_Chr5g0022451 RchiOBHm_Chr5g0022541 RchiOBHm_Chr5g0022591 RchiOBHm_Chr5g0022601 RchiOBHm_Chr5g0022701 RchiOBHm_Chr5g0022741 RchiOBHm_Chr5g0022791 RchiOBHm_Chr5g0022811 RchiOBHm_Chr5g0022851 RchiOBHm_Chr5g0029441 RchiOBHm_Chr5g0041631 RchiOBHm_Chr5g0069391 RchiOBHm_Chr6g0273811 RchiOBHm_Chr6g0273831 RchiOBHm_Chr6g0275331 RchiOBHm_Chr7g0219061
rosa_laevigata RLG00000002463 RLG00000020007 RLG00000020008 RLG00000022320 RLG00000022321 RLG00000023446 RLG00000030742 RLG00000030743 RLG00000030747 RLG00000032557 RLG00000032564 RLG00000032571 RLG00000032573 RLG00000032574 RLG00000032612 RLG00000032633 RLG00000032636 RLG00000032638 RLG00000032650 RLG00000032651 RLG00000032652 RLG00000032653 RLG00000032655 RLG00000032673 RLG00000032678 RLG00000032769 RLG00000032857 RLG00000033168 RLG00000033465 RLG00000034086 RLG00000034222 RLG00000035290
rosa_multiflora Rmu_co8143358.1_g000001 Rmu_co8518791.1_g000001 Rmu_sc0000178.1_g000008 Rmu_sc0000178.1_g000014 Rmu_sc0000401.1_g000005 Rmu_sc0000401.1_g000013 Rmu_sc0000401.1_g000017 Rmu_sc0000401.1_g000018 Rmu_sc0000401.1_g000024 Rmu_sc0000401.1_g000025 Rmu_sc0000576.1_g000020 Rmu_sc0001585.1_g000003 Rmu_sc0001585.1_g000005 Rmu_sc0001585.1_g000008 Rmu_sc0001784.1_g000006 Rmu_sc0001784.1_g000011 Rmu_sc0001784.1_g000022 Rmu_sc0001784.1_g000028 Rmu_sc0002052.1_g000004 Rmu_sc0002052.1_g000011 Rmu_sc0002277.1_g000003 Rmu_sc0002277.1_g000006 Rmu_sc0002277.1_g000024 Rmu_sc0002658.1_g000012 Rmu_sc0003512.1_g000004 Rmu_sc0003512.1_g000007 Rmu_sc0004180.1_g000016 Rmu_sc0004180.1_g000029 Rmu_sc0004180.1_g000034 Rmu_sc0005639.1_g000008 Rmu_sc0005639.1_g000023 Rmu_sc0006070.1_g000016 Rmu_sc0006070.1_g000017 Rmu_sc0006966.1_g000021 Rmu_sc0006966.1_g000023 Rmu_sc0007239.1_g000003 Rmu_sc0008460.1_g000010 Rmu_sc0009984.1_g000008 Rmu_sc0010181.1_g000005 Rmu_sc0010181.1_g000010 Rmu_sc0010503.1_g000006 Rmu_sc0011646.1_g000003 Rmu_sc0012984.1_g000011 Rmu_sc0016972.1_g000005 Rmu_sc0016972.1_g000008 Rmu_sc0023070.1_g000003 Rmu_sc0025660.1_g000001 Rmu_ssc0000322.1_g000019
rosa_roxburghii Rroxscaffold_1G00038860 Rroxscaffold_1G00053490 Rroxscaffold_1G00053500 Rroxscaffold_1G00054230 Rroxscaffold_1G00056460 Rroxscaffold_1G00056470 Rroxscaffold_1G00056480 Rroxscaffold_1G00056500 Rroxscaffold_1G00056510 Rroxscaffold_1G00056620 Rroxscaffold_1G00056690 Rroxscaffold_1G00056710 Rroxscaffold_1G00056720 Rroxscaffold_1G00056730 Rroxscaffold_1G00056740 Rroxscaffold_1G00056750 Rroxscaffold_1G00056760 Rroxscaffold_1G00056870 Rroxscaffold_1G00056900 Rroxscaffold_1G00057120 Rroxscaffold_1G00057560 Rroxscaffold_2G00077430 Rroxscaffold_2G00102160 Rroxscaffold_3G00231420 Rroxscaffold_3G00231430 Rroxscaffold_4G00297230 Rroxscaffold_4G00331570 Rroxscaffold_6G00396700 Rroxscaffold_6G00400940 Rroxscaffold_7G00192740
rosa_rugosa Rorug01G0004400 Rorug01G0004500 Rorug02G0377600 Rorug02G0378000 Rorug02G0582800 Rorug02G0583400 Rorug03G0187000 Rorug03G0218800 Rorug04G0081200 Rorug05G0062700 Rorug05G0062700 Rorug05G0063100 Rorug05G0063200 Rorug05G0063200 Rorug05G0063200 Rorug05G0067000 Rorug05G0069700 Rorug05G0069900 Rorug05G0070000 Rorug05G0070100 Rorug05G0070300 Rorug05G0070400 Rorug05G0070600 Rorug05G0070600 Rorug05G0072300 Rorug05G0072400 Rorug05G0072500 Rorug05G0072500 Rorug05G0072600.1 Rorug05G0072700 Rorug05G0072800 Rorug05G0072800 Rorug05G0072900 Rorug05G0073000 Rorug05G0073000 Rorug05G0073400 Rorug05G0073400 Rorug05G0073400 Rorug05G0074800 Rorug05G0075000 Rorug05G0114300 Rorug05G0194200 Rorug06G0097800
rosa_samantha Rh2AG401400 Rh2CG387600 Rh2CG417000 Rh2CG637400 Rh5CG169600 Rh5CG172100 Rh5CG175200 Rh5CG317100 Rh6DG187900
rosa_wichuraiana Rw1G000750 Rw1G000790 Rw1G000820 Rw1G000860 Rw1G000880 Rw1G000910 Rw2G035180 Rw2G035200 Rw2G035240 Rw2G054370 Rw2G054380 Rw5G013570 Rw5G013580 Rw5G013590 Rw5G013910 Rw5G013980 Rw5G014110 Rw5G014120 Rw5G014280 Rw5G014310 Rw5G014400 Rw5G014420 Rw5G014440 Rw5G014460 Rw5G014480 Rw5G014500 Rw5G014520 Rw5G014530 Rw5G042390

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 1 cut(s) 3239
Acc65I GGTACC 1 cut(s) 2395
AccB1I GGYRCC 1 cut(s) 2395
AccB7I CCANNNNNTGG 1 cut(s) 3984
AccI GTMKAC 1 cut(s) 460
AccII CGCG 1 cut(s) 517
AccIII TCCGGA 1 cut(s) 837
AciI CCGC 5 cut(s) 477, 588, 596, 641, 3871
AcoI YGGCCR 1 cut(s) 563
AcsI RAATTY 7 cut(s) 1693, 2246, 2307, 2680, 2804, 3256, 4021
AcuI CTGAAG 1 cut(s) 3096
AfaI GTAC 6 cut(s) 456, 1090, 1376, 1925, 2397, 2773
AfiI CCNNNNNNNGG 6 cut(s) 807, 808, 844, 1274, 3109, 3984
AflII CTTAAG 1 cut(s) 1903
AflIII ACRYGT 1 cut(s) 1030
AhdI GACNNNNNGTC 1 cut(s) 1807
AhlI ACTAGT 1 cut(s) 1597
AjiI CACGTC 1 cut(s) 1031
AjnI CCWGG 4 cut(s) 732, 2640, 2894, 3108
AloI GAACNNNNNNTCC 2 cut(s) 2681, 2713
Alw26I GTCTC 3 cut(s) 1631, 1829, 3519
Aor13HI TCCGGA 1 cut(s) 837
ApaI GGGCCC 1 cut(s) 3885
ApeKI GCWGC 5 cut(s) 618, 872, 990, 1011, 2035
ApoI RAATTY 7 cut(s) 1693, 2246, 2307, 2680, 2804, 3256, 4021
ArsI GACNNNNNNTTYG 2 cut(s) 1666, 1698
Asp700I GAANNNNTTC 2 cut(s) 1282, 2146
Asp718I GGTACC 1 cut(s) 2395
AspLEI GCGC 1 cut(s) 517
AsuC2I CCSGG 1 cut(s) 3424
AsuHPI GGTGA 7 cut(s) 308, 349, 1121, 1793, 1819, 2555, 2681
AvaII GGWCC 6 cut(s) 739, 798, 1396, 2240, 3004, 3965
AxyI CCTNAGG 1 cut(s) 3543
BaeGI GKGCMC 1 cut(s) 3885
BamHI GGATCC 2 cut(s) 811, 847
BanI GGYRCC 1 cut(s) 2395
BanII GRGCYC 1 cut(s) 3885
BauI CACGAG 1 cut(s) 1239
BbsI GAAGAC 1 cut(s) 754
BbvCI CCTCAGC 1 cut(s) 276
BbvI GCAGC 5 cut(s) 630, 859, 977, 998, 2047
BceAI ACGGC 2 cut(s) 631, 955
BciT130I CCWGG 4 cut(s) 734, 2642, 2896, 3110
BciVI GTATCC 2 cut(s) 249, 2184
BclI TGATCA 2 cut(s) 3603, 3718
BcnI CCSGG 1 cut(s) 3424
BcoDI GTCTC 3 cut(s) 1631, 1829, 3519
BcuI ACTAGT 1 cut(s) 1597
BfrI CTTAAG 1 cut(s) 1903
BfuI GTATCC 2 cut(s) 249, 2184
BisI GCNGC 6 cut(s) 589, 619, 873, 991, 1012, 2036
BlsI GCNGC 6 cut(s) 590, 620, 874, 992, 1013, 2037
Bme1390I CCNGG 5 cut(s) 734, 2642, 2896, 3110, 3424
Bme18I GGWCC 6 cut(s) 739, 798, 1396, 2240, 3004, 3965
BmeRI GACNNNNNGTC 1 cut(s) 1807
BmgBI CACGTC 1 cut(s) 1031
BmrFI CCNGG 5 cut(s) 734, 2642, 2896, 3110, 3424
BmrI ACTGGG 1 cut(s) 2246
BmsI GCATC 6 cut(s) 214, 596, 628, 1253, 2229, 2541
BmuI ACTGGG 1 cut(s) 2246
BoxI GACNNNNGTC 1 cut(s) 630
BpiI GAAGAC 1 cut(s) 754
Bpu10I CCTNAGC 1 cut(s) 276
BpuEI CTTGAG 3 cut(s) 1655, 2236, 2440
BpuMI CCSGG 1 cut(s) 3424
Bsa29I ATCGAT 1 cut(s) 3314
BsaAI YACGTR 1 cut(s) 458
BsaJI CCNNGG 8 cut(s) 613, 671, 829, 1630, 2539, 2640, 2757, 3109
BsaWI WCCGGW 1 cut(s) 837
BsaXI ACNNNNNCTCC 2 cut(s) 2858, 2888
Bsc4I CCNNNNNNNGG 6 cut(s) 807, 808, 844, 1274, 3109, 3984
Bse118I RCCGGY 3 cut(s) 565, 728, 960
Bse21I CCTNAGG 1 cut(s) 3543
Bse3DI GCAATG 5 cut(s) 226, 1555, 2427, 2744, 3490
BseAI TCCGGA 1 cut(s) 837
BseBI CCWGG 4 cut(s) 734, 2642, 2896, 3110
BseCI ATCGAT 1 cut(s) 3314
BseDI CCNNGG 8 cut(s) 613, 671, 829, 1630, 2539, 2640, 2757, 3109
BseGI GGATG 6 cut(s) 1520, 1820, 2016, 3159, 3899, 4029
BseLI CCNNNNNNNGG 6 cut(s) 807, 808, 844, 1274, 3109, 3984
BseMI GCAATG 5 cut(s) 226, 1555, 2427, 2744, 3490
BseRI GAGGAG 2 cut(s) 264, 1404
BseSI GKGCMC 1 cut(s) 3885
BseXI GCAGC 5 cut(s) 630, 859, 977, 998, 2047
BseYI CCCAGC 2 cut(s) 2456, 3244
BsgI GTGCAG 2 cut(s) 567, 2821
Bsh1236I CGCG 1 cut(s) 517
BshNI GGYRCC 1 cut(s) 2395
BshVI ATCGAT 1 cut(s) 3314
BsiSI CCGG 5 cut(s) 566, 729, 838, 961, 3423
BsiWI CGTACG 1 cut(s) 454
BslFI GGGAC 4 cut(s) 638, 862, 1743, 2304
BslI CCNNNNNNNGG 6 cut(s) 807, 808, 844, 1274, 3109, 3984
BsmAI GTCTC 3 cut(s) 1631, 1829, 3519
BsmBI CGTCTC 1 cut(s) 1829
BsmFI GGGAC 4 cut(s) 638, 862, 1743, 2304
BsmI GAATGC 2 cut(s) 1641, 3098
Bsp120I GGGCCC 1 cut(s) 3881
Bsp1286I GDGCHC 1 cut(s) 3885
Bsp13I TCCGGA 1 cut(s) 837
Bsp19I CCATGG 1 cut(s) 2757
BspACI CCGC 5 cut(s) 477, 588, 596, 641, 3871
BspDI ATCGAT 1 cut(s) 3314
BspEI TCCGGA 1 cut(s) 837
BspFNI CGCG 1 cut(s) 517
BspQI GCTCTTC 1 cut(s) 927
BspT107I GGYRCC 1 cut(s) 2395
BspTI CTTAAG 1 cut(s) 1903
BsrDI GCAATG 5 cut(s) 226, 1555, 2427, 2744, 3490
BsrFI RCCGGY 3 cut(s) 565, 728, 960
BssAI RCCGGY 3 cut(s) 565, 728, 960
BssECI CCNNGG 8 cut(s) 613, 671, 829, 1630, 2539, 2640, 2757, 3109
BssSI CACGAG 1 cut(s) 1239
BssT1I CCWWGG 4 cut(s) 671, 829, 2539, 2757
Bst2BI CACGAG 1 cut(s) 1239
Bst2UI CCWGG 4 cut(s) 734, 2642, 2896, 3110
Bst4CI ACNGT 9 cut(s) 491, 1079, 1432, 1734, 1805, 2610, 2693, 2732, 2973
Bst6I CTCTTC 6 cut(s) 563, 927, 1506, 2121, 2843, 3133
BstAFI CTTAAG 1 cut(s) 1903
BstBAI YACGTR 1 cut(s) 458
BstC8I GCNNGC 7 cut(s) 314, 438, 550, 652, 730, 1414, 2912
BstDSI CCRYGG 3 cut(s) 613, 1630, 2757
BstENI CCTNNNNNAGG 1 cut(s) 3107
BstF5I GGATG 6 cut(s) 1520, 1820, 2016, 3159, 3899, 4029
BstFNI CGCG 1 cut(s) 517
BstHHI GCGC 1 cut(s) 517
BstMAI GTCTC 3 cut(s) 1631, 1829, 3519
BstMWI GCNNNNNNNGC 7 cut(s) 483, 615, 647, 872, 2044, 2424, 2467
BstNI CCWGG 4 cut(s) 734, 2642, 2896, 3110
BstNSI RCATGY 2 cut(s) 1441, 2914
BstPAI GACNNNNGTC 1 cut(s) 630
BstSCI CCNGG 5 cut(s) 732, 2640, 2894, 3108, 3422
BstSLI GKGCMC 1 cut(s) 3885
BstSNI TACGTA 1 cut(s) 458
BstUI CGCG 1 cut(s) 517
BstV1I GCAGC 5 cut(s) 630, 859, 977, 998, 2047
BstV2I GAAGAC 1 cut(s) 754
BstX2I RGATCY 5 cut(s) 694, 811, 840, 847, 949
BstXI CCANNNNNNTGG 4 cut(s) 584, 2456, 2666, 2685
BstYI RGATCY 5 cut(s) 694, 811, 840, 847, 949
Bsu15I ATCGAT 1 cut(s) 3314
Bsu36I CCTNAGG 1 cut(s) 3543
BsuI GTATCC 2 cut(s) 249, 2184
BsuTUI ATCGAT 1 cut(s) 3314
BtgI CCRYGG 3 cut(s) 613, 1630, 2757
BtgZI GCGATG 2 cut(s) 279, 2028
BtrI CACGTC 1 cut(s) 1031
BtsCI GGATG 6 cut(s) 1520, 1820, 2016, 3159, 3899, 4029
BtsI GCAGTG 2 cut(s) 447, 472
BtsIMutI CAGTG 9 cut(s) 447, 472, 1084, 1428, 1573, 2592, 2606, 2838, 2952
Cac8I GCNNGC 7 cut(s) 314, 438, 550, 652, 730, 1414, 2912
CfoI GCGC 1 cut(s) 517
Cfr10I RCCGGY 3 cut(s) 565, 728, 960
ClaI ATCGAT 1 cut(s) 3314
CseI GACGC 3 cut(s) 471, 598, 864
Csp6I GTAC 6 cut(s) 455, 1089, 1375, 1924, 2396, 2772
CspCI CAANNNNNGTGG 4 cut(s) 1759, 1794, 3040, 3075
CviQI GTAC 6 cut(s) 455, 1089, 1375, 1924, 2396, 2772
DraI TTTAAA 2 cut(s) 187, 2203
DriI GACNNNNNGTC 1 cut(s) 1807
EaeI YGGCCR 1 cut(s) 563
Eam1104I CTCTTC 6 cut(s) 563, 927, 1506, 2121, 2843, 3133
Eam1105I GACNNNNNGTC 1 cut(s) 1807
EarI CTCTTC 6 cut(s) 563, 927, 1506, 2121, 2843, 3133
EciI GGCGGA 1 cut(s) 611
Eco105I TACGTA 1 cut(s) 458
Eco130I CCWWGG 4 cut(s) 671, 829, 2539, 2757
Eco24I GRGCYC 1 cut(s) 3885
Eco32I GATATC 1 cut(s) 1892
Eco47I GGWCC 6 cut(s) 739, 798, 1396, 2240, 3004, 3965
Eco57I CTGAAG 1 cut(s) 3096
Eco81I CCTNAGG 1 cut(s) 3543
EcoNI CCTNNNNNAGG 1 cut(s) 3107
EcoO109I RGGNCCY 2 cut(s) 798, 3882
EcoRI GAATTC 1 cut(s) 1693
EcoRII CCWGG 4 cut(s) 732, 2640, 2894, 3108
EcoRV GATATC 1 cut(s) 1892
EcoT14I CCWWGG 4 cut(s) 671, 829, 2539, 2757
EcoT38I GRGCYC 1 cut(s) 3885
ErhI CCWWGG 4 cut(s) 671, 829, 2539, 2757
Esp3I CGTCTC 1 cut(s) 1829
FalI AAGNNNNNCTT 4 cut(s) 927, 959, 3728, 3760
FaqI GGGAC 4 cut(s) 638, 862, 1743, 2304
FbaI TGATCA 2 cut(s) 3603, 3718
FblI GTMKAC 1 cut(s) 460
Fnu4HI GCNGC 6 cut(s) 589, 619, 873, 991, 1012, 2036
FokI GGATG 6 cut(s) 1507, 1827, 2003, 3146, 3886, 4016
FriOI GRGCYC 1 cut(s) 3885
Fsp4HI GCNGC 6 cut(s) 589, 619, 873, 991, 1012, 2036
GlaI GCGC 1 cut(s) 516
GluI GCNGC 6 cut(s) 589, 619, 873, 991, 1012, 2036
GsaI CCCAGC 2 cut(s) 2460, 3248
HapII CCGG 5 cut(s) 566, 729, 838, 961, 3423
HgaI GACGC 3 cut(s) 471, 598, 864
HhaI GCGC 1 cut(s) 517
Hin6I GCGC 1 cut(s) 515
HinP1I GCGC 1 cut(s) 515
HincII GTYRAC 4 cut(s) 571, 1435, 1662, 1768
HindII GTYRAC 4 cut(s) 571, 1435, 1662, 1768
HindIII AAGCTT 1 cut(s) 1900
HpaI GTTAAC 2 cut(s) 571, 1435
HpaII CCGG 5 cut(s) 566, 729, 838, 961, 3423
HphI GGTGA 7 cut(s) 308, 349, 1121, 1793, 1819, 2555, 2681
Hpy99I CGWCG 1 cut(s) 455
HpyAV CCTTC 9 cut(s) 209, 623, 789, 963, 1131, 1455, 2075, 2976, 3560
HpyCH4III ACNGT 9 cut(s) 491, 1079, 1432, 1734, 1805, 2610, 2693, 2732, 2973
HpyCH4IV ACGT 4 cut(s) 453, 457, 1030, 1838
HpyF10VI GCNNNNNNNGC 7 cut(s) 483, 615, 647, 872, 2044, 2424, 2467
HpySE526I ACGT 4 cut(s) 453, 457, 1030, 1838
HspAI GCGC 1 cut(s) 515
Kpn2I TCCGGA 1 cut(s) 837
KpnI GGTACC 1 cut(s) 2399
KroI GCCGGC 1 cut(s) 728
KroNI GCCGGC 1 cut(s) 730
Ksp22I TGATCA 2 cut(s) 3603, 3718
KspAI GTTAAC 2 cut(s) 571, 1435
LguI GCTCTTC 1 cut(s) 927
LmnI GCTCC 3 cut(s) 1446, 2741, 3223
Lsp1109I GCAGC 5 cut(s) 630, 859, 977, 998, 2047
LweI GCATC 6 cut(s) 214, 596, 628, 1253, 2229, 2541
MaeII ACGT 4 cut(s) 453, 457, 1030, 1838
MaeIII GTNAC 7 cut(s) 442, 2089, 3029, 3388, 3507, 3956, 4004
MfeI CAATTG 2 cut(s) 723, 1329
MflI RGATCY 5 cut(s) 694, 811, 840, 847, 949
MhlI GDGCHC 1 cut(s) 3885
MlyI GAGTC 4 cut(s) 121, 2286, 2860, 3385
MmeI TCCRAC 5 cut(s) 474, 1821, 2322, 2967, 3744
MroI TCCGGA 1 cut(s) 837
MroNI GCCGGC 1 cut(s) 728
MroXI GAANNNNTTC 2 cut(s) 1282, 2146
MslI CAYNNNNRTG 5 cut(s) 332, 477, 747, 2843, 2974
MspCI CTTAAG 1 cut(s) 1903
MspI CCGG 5 cut(s) 566, 729, 838, 961, 3423
MspR9I CCNGG 5 cut(s) 734, 2642, 2896, 3110, 3424
MunI CAATTG 2 cut(s) 723, 1329
Mva1269I GAATGC 2 cut(s) 1641, 3098
MvaI CCWGG 4 cut(s) 734, 2642, 2896, 3110
MvnI CGCG 1 cut(s) 517
MwoI GCNNNNNNNGC 7 cut(s) 483, 615, 647, 872, 2044, 2424, 2467
NaeI GCCGGC 1 cut(s) 730
NciI CCSGG 1 cut(s) 3424
NcoI CCATGG 1 cut(s) 2757
NgoMIV GCCGGC 1 cut(s) 728
NmeAIII GCCGAG 1 cut(s) 3548
NmuCI GTSAC 3 cut(s) 442, 3029, 3388
NspI RCATGY 2 cut(s) 1441, 2914
PaeI GCATGC 1 cut(s) 2914
PciSI GCTCTTC 1 cut(s) 927
PctI GAATGC 2 cut(s) 1641, 3098
PdiI GCCGGC 1 cut(s) 730
PdmI GAANNNNTTC 2 cut(s) 1282, 2146
Pfl23II CGTACG 1 cut(s) 454
PflMI CCANNNNNTGG 1 cut(s) 3984
PfoI TCCNGGA 1 cut(s) 3422
PkrI GCNGC 6 cut(s) 590, 620, 874, 992, 1013, 2037
PleI GAGTC 4 cut(s) 121, 2286, 2859, 3385
PpsI GAGTC 4 cut(s) 121, 2286, 2859, 3385
Ppu21I YACGTR 1 cut(s) 458
PpuMI RGGWCCY 1 cut(s) 798
PshAI GACNNNNGTC 1 cut(s) 630
PsiI TTATAA 1 cut(s) 3239
Psp5II RGGWCCY 1 cut(s) 798
Psp6I CCWGG 4 cut(s) 732, 2640, 2894, 3108
PspFI CCCAGC 2 cut(s) 2456, 3244
PspGI CCWGG 4 cut(s) 732, 2640, 2894, 3108
PspLI CGTACG 1 cut(s) 454
PspOMI GGGCCC 1 cut(s) 3881
PspPPI RGGWCCY 1 cut(s) 798
PsuI RGATCY 5 cut(s) 694, 811, 840, 847, 949
RsaI GTAC 6 cut(s) 456, 1090, 1376, 1925, 2397, 2773
RsaNI GTAC 6 cut(s) 455, 1089, 1375, 1924, 2396, 2772
RseI CAYNNNNRTG 5 cut(s) 332, 477, 747, 2843, 2974
SapI GCTCTTC 1 cut(s) 927
SatI GCNGC 6 cut(s) 589, 619, 873, 991, 1012, 2036
SchI GAGTC 4 cut(s) 121, 2286, 2860, 3385
ScrFI CCNGG 5 cut(s) 734, 2642, 2896, 3110, 3424
SduI GDGCHC 1 cut(s) 3885
SfaNI GCATC 6 cut(s) 214, 596, 628, 1253, 2229, 2541
SinI GGWCC 6 cut(s) 739, 798, 1396, 2240, 3004, 3965
SmiMI CAYNNNNRTG 5 cut(s) 332, 477, 747, 2843, 2974
SmlI CTYRAG 4 cut(s) 1670, 1903, 2215, 2419
SmoI CTYRAG 4 cut(s) 1670, 1903, 2215, 2419
SnaBI TACGTA 1 cut(s) 458
SpeI ACTAGT 1 cut(s) 1597
SphI GCATGC 1 cut(s) 2914
SsiI CCGC 5 cut(s) 477, 588, 596, 641, 3871
SspI AATATT 2 cut(s) 907, 3907
StyD4I CCNGG 5 cut(s) 732, 2640, 2894, 3108, 3422
StyI CCWWGG 4 cut(s) 671, 829, 2539, 2757
TaaI ACNGT 9 cut(s) 491, 1079, 1432, 1734, 1805, 2610, 2693, 2732, 2973
TaiI ACGT 4 cut(s) 456, 460, 1033, 1841
TaqI TCGA 7 cut(s) 29, 604, 634, 765, 2723, 3314, 3335
TatI WGTACW 1 cut(s) 2771
TauI GCSGC 1 cut(s) 591
TscAI CASTG 9 cut(s) 447, 472, 1084, 1435, 1580, 2599, 2613, 2845, 2959
TseFI GTSAC 3 cut(s) 442, 3029, 3388
TseI GCWGC 5 cut(s) 618, 872, 990, 1011, 2035
Tsp45I GTSAC 3 cut(s) 442, 3029, 3388
TspGWI ACGGA 3 cut(s) 411, 1647, 3495
TspRI CASTG 9 cut(s) 447, 472, 1084, 1435, 1580, 2599, 2613, 2845, 2959
Van91I CCANNNNNTGG 1 cut(s) 3984
Vha464I CTTAAG 1 cut(s) 1903
VpaK11BI GGWCC 6 cut(s) 739, 798, 1396, 2240, 3004, 3965
XagI CCTNNNNNAGG 1 cut(s) 3107
XapI RAATTY 7 cut(s) 1693, 2246, 2307, 2680, 2804, 3256, 4021
XbaI TCTAGA 1 cut(s) 2362
XceI RCATGY 2 cut(s) 1441, 2914
XcmI CCANNNNNNNNNTGG 2 cut(s) 858, 2331
XmiI GTMKAC 1 cut(s) 460
XmnI GAANNNNTTC 2 cut(s) 1282, 2146
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.