Rorug05G0072500

LRR receptor-like serine threonine-protein kinase

Basic Information

Type: gene
Biological Identity
rosa_rugosa
GWHBQTZ00000005
Physical Location & Seq
Forward (+)
6233850 .. 6237081
3232 bp
Loading structure...
UTR
Exon/CDS
Intron
Rorug05G0072500.1

Sequence Viewer

Length: 2574 bp
ATGTCTTTTTGTTTTACATTCCACACAAATAGGCTCTTGGTGCCTCTTCTCATCACCTGTTTGATAATTTGTCTCGAGGGAGTTGCAGTTCAAAATGAAAAAATTGTCACTAACGTTGGAGCAATCATTAATGCTGATTCCCGTATCGGCAAAGAACAGAAAGCTGCCATGGAAATTGCAGCTGAAAGCTTCAACAACAAGTCCGGCAACACTCGTGAACTAATCCTTCATTTTCAAGACTCCGGGGGAGATCCCTTTCTTGCTGCTTCTGAGGTTGAAGATTTGATAAAGGAAAAGAAAGTAGAAGTGATAGTTGGCATGGAGACTTGGCAGGAAGCAGCTCTAGTAGCTGATCATGTGGGAAACCAATCTAAAAAAATTCCGGTAATTTCATTTGCAGCACCAGCCATAACCGTGCCACTAATGCAACAGCGTTGGCCATTTCTGATACGAATGGCAAGCAATGGATCTGCTCAGATGAAATGCATTGCACACATAGTTGCTGCATACAATTGGAAAAGGGTTGTTGTGATATACGAAGACGACGGTTATGGTGGTCAAGTTGGGTTGCTAGCTCTTTTATCTGAGGCTCTTCAAGATGCAAATGCAAAGATTGAGAATCATTTGGTTCTTCCGAGACTAAATAATTCTTCGATGGCTAAACCTAATTGGGATGAAGTAGAAGAGCTGTTGAAGCTTCCCACCTTTCAGTCTCGGGTGTTTATTGTTCTTCAATCATCTTTACCAACAGTGACTAATCTGTTCAGCGTGGCTAGGAAGATGGGACTTGTAGGGAGAGAGTCGGCTTGGATAATCACAGAATGTATCACCAGTTTGCTTGACCCTCAAGGTGACGACTCTATGGAAGGAACTCTGGGAATCAAGACCGACTACGCCACTGAGTCTAATTCTTACGCTGAATTCCAGAAGGAATTCCAAGCTAAGTATGCAGAAGAAAATAACTCCAAGCCAGGAATTTATGCTCTTCGAGCATACGATACTATTACTGTCATTTCAAAGGCCTTAGAAAGGATGCCTAATAACACCACTAGTACTAGCCTTCAGAATATGATAACTACATTGTTGAGCAATTACAAGGGTTTAAGTGGGAATATGCACTTGAAAGAAGGTGAAGCACTGTTGGATTCTCTGAGATTCAGGATCATAAATGTTGTGGATGGGAAGAGGAACAAAGAGTTAAACTTTTGGTCACCAGAGGTTGGGTTCTCCGAAGGCCTAGGTTGGGAAGCCTCACACGAGAACCTCACACGTGCGCCTCAAGGCTGGGGAATGCCTACTGCTGGGAAGCCAATGAAATTTGGGGTTCCAGCTGGTAACAAGCACTTCGGTAAATTTGTAAAGGTTGAGCCCAGAAACAATTCATCATATGACTTCTCATATGACGGTTTCTCCATTAGAATTTTCTACACGGTACTAACTCATTTAAATTATCATCTACCATTTGAATTTGTACCCTTTAACGGTTCTTACGATGATTTGGTAGAAGGAGTTTATAACAAGAATTTTGAAGCTGCTGTTGGTGATTTCACTATATTACCTGAGCGAATGGAGAAAGTGGAATTCACTCAGCCATATATGAAGTCTGGTTTGTCAATGATAGTCTTAGAAAAATACGATGAATCAACATGGATGTTTGTGAGACCTTTCACATGGAAAATATGGGTGGTGAGTGGTGCCATCTTAATCTACACTAGTTTAGTAGTATGGTTCCTGGAGCGCTCAAGAAATCCAGAATTTGATGGTTCATTGAAGAATCAGATTGGCGCAGCAACTTATATCACTTTCTCCTCCTTGTTCTTTGCTCACAGAGAAAAAGTATATACCAACTTTGCTCGGGTAGTATTTCTTCTGTGGCTATTTATTGTATTGATCTTGAGCTCAAGCTACACTGCTAGTCTTTCTTCCATGCTTACCACCCATGTAACAACTGAAATGTTAAACAAGACAGCAAAAGTTGGTTGGGATGGAGGTCCATTTGTCTCAAAGTATCTGTCAGATACTTATAAATTCGATGCTAACAACATAATCAATGTAAGCAGCGAAAACAGCTACACTGATGCATTCAAAAGCAAAAATATAACTGCTATGTTTCTTGAACTCCCATATGCTCAAGTCTACATGAACGAGCTCTGTGAGGGATATACTTCAATCACAGAACCCTATGAATTTGGAGGATTTAGCTTTATATTCCAGAAGGGCTCTCCAATAGCTAGGGATTTCTCTAAGGCCATTCTAGAGCTATTGGAGAATGGATATATCAAGCAACTTCAAAATGAATTATTGACTCCCGAGAAGCAGTGTCCAAACACTAATAGTAGACCAAAAAGCTTGAGCCTTCATAGCTTTTCGGGTCTCTATGTAATATGCGGTGCTACTTCCACCCTGTGTCTTCTACTATCTTTTACCCCATGTGTGAGGAAGTCTCAGAAGCAAGAAAAGCACGAAGGCAATGCAGGTCCAAGTGATGAAAGTCTCCTTCGAATTCGATCCCAACACTCCAACAGTCCGCAGGCCTTCACATCCGTAGAAATCGAATGCGTGCCGCAGAGATGA

Protein Analysis

857

Amino Acids

96.14

Weight (kDa)

5.87

Isoelectric Point (pI)

40.57

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
Peripla_BP_6 PF13458 49 - 370 1.1e-18 Periplasmic binding protein
ANF_receptor PF01094 54 - 392 1.1e-42 Receptor family ligand binding region
Lig_chan-Glu_bd PF10613 462 - 541 3.6e-07 Ligated ion channel L-glutamate- and glycine-binding site
SBP_bac_3 PF00497 466 - 766 1.9e-11 Bacterial extracellular solute-binding proteins, family 3
Lig_chan PF00060 557 - 798 7.6e-24 Ligand-gated ion channel
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready

Orthologous Genes (Group: OG0000048)

Species Orthologous Gene IDs
arabidopsis_thaliana AT2G34930
fragaria_vesca FvH4_3g12670 FvH4_3g12672 FvH4_3g12740 FvH4_3g12742 FvH4_3g12770 FvH4_3g12770 FvH4_3g12860 FvH4_3g12890 FvH4_3g13431 FvH4_3g13433 FvH4_3g13435 FvH4_3g13470 FvH4_3g13470 FvH4_3g13480 FvH4_3g13562 FvH4_3g13580 FvH4_3g13600 FvH4_3g13600 FvH4_3g13600 FvH4_3g13600 FvH4_3g13600 FvH4_3g13600 FvH4_3g13610 FvH4_3g13620 FvH4_3g13620 FvH4_3g23240 FvH4_3g32910 FvH4_3g35070 FvH4_3g45520 FvH4_5g08430 FvH4_5g08450 FvH4_6g53230 FvH4_6g53300
malus_domestica MD05G1217600.v1.1 MD05G1217700.v1.1 MD05G1224700.v1.1 MD05G1225100.v1.1 MD05G1225300.v1.1 MD05G1225400.v1.1 MD05G1235900.v1.1 MD05G1236100.v1.1 MD05G1236300.v1.1 MD05G1237200.v1.1 MD05G1241600.v1.1 MD05G1245700.v1.1 MD05G1245800.v1.1 MD05G1245900.v1.1 MD05G1246000.v1.1 MD05G1246100.v1.1 MD05G1246300.v1.1 MD05G1246400.v1.1 MD05G1246500.v1.1 MD05G1248100.v1.1 MD05G1248200.v1.1 MD05G1264300.v1.1 MD05G1275900.v1.1 MD07G1051400.v1.1 MD09G1012600.v1.1 MD09G1012700.v1.1 MD09G1012800.v1.1 MD10G1221400.v1.1 MD10G1221500.v1.1 MD10G1221600.v1.1 MD10G1221900.v1.1 MD10G1222200.v1.1 MD10G1222400.v1.1 MD10G1222500.v1.1 MD10G1222900.v1.1 MD10G1223000.v1.1 MD10G1223100.v1.1 MD10G1223500.v1.1 MD10G1228000.v1.1 MD12G1019600.v1.1 MD12G1020000.v1.1 MD12G1020100.v1.1 MD17G1013200.v1.1 MD17G1013300.v1.1 MD17G1013400.v1.1
prunus_persica Prupe.1G060500_v2.0.a1 Prupe.1G100100_v2.0.a1 Prupe.3G124000_v2.0.a1 Prupe.3G304400_v2.0.a1 Prupe.4G116800_v2.0.a1 Prupe.4G116900_v2.0.a1 Prupe.4G117000_v2.0.a1 Prupe.4G121800_v2.0.a1 Prupe.4G121900_v2.0.a1 Prupe.4G122000_v2.0.a1 Prupe.4G122100_v2.0.a1 Prupe.4G122200_v2.0.a1 Prupe.4G122300_v2.0.a1 Prupe.4G122500_v2.0.a1 Prupe.4G122600_v2.0.a1 Prupe.4G122800_v2.0.a1 Prupe.4G122900_v2.0.a1 Prupe.4G123000_v2.0.a1 Prupe.4G123100_v2.0.a1 Prupe.4G123200_v2.0.a1 Prupe.4G131500_v2.0.a1 Prupe.4G131600_v2.0.a1 Prupe.7G032500_v2.0.a1 Prupe.7G032900_v2.0.a1 Prupe.7G033000_v2.0.a1 Prupe.7G033100_v2.0.a1 Prupe.7G033300_v2.0.a1 Prupe.7G033600_v2.0.a1 Prupe.7G034600_v2.0.a1 Prupe.7G040200_v2.0.a1 Prupe.7G059200_v2.0.a1
pyrus_communis pycom05g20580 pycom05g20590 pycom05g20760 pycom05g20800 pycom05g21280 pycom05g21290 pycom05g21820 pycom05g21830 pycom05g22180 pycom05g22190 pycom05g22210 pycom05g22450 pycom05g22460 pycom05g22470 pycom05g22480 pycom05g22490 pycom05g23770 pycom05g23780 pycom05g24050 pycom05g24060 pycom07g03910 pycom10g18700 pycom10g18720 pycom10g18730 pycom10g18740 pycom10g19150 pycom111g01060 pycom12g01660 pycom12g01690 pycom12g01720 pycom12g01740 pycom12g01750 pycom12g01770 pycom12g01810 pycom12g01820 pycom12g01830 pycom12g01840 pycom12g01870 pycom12g01900 pycom17g01060 pycom17g01070
rosa_chinensis RchiOBHm_Chr1g0315041 RchiOBHm_Chr1g0315051 RchiOBHm_Chr1g0315071 RchiOBHm_Chr1g0315161 RchiOBHm_Chr1g0315211 RchiOBHm_Chr1g0315251 RchiOBHm_Chr1g0315321 RchiOBHm_Chr1g0315391 RchiOBHm_Chr1g0315451 RchiOBHm_Chr1g0315481 RchiOBHm_Chr1g0315551 RchiOBHm_Chr1g0315601 RchiOBHm_Chr1g0315621 RchiOBHm_Chr1g0359221 RchiOBHm_Chr2g0142981 RchiOBHm_Chr2g0143001 RchiOBHm_Chr2g0143061 RchiOBHm_Chr2g0143091 RchiOBHm_Chr2g0175321 RchiOBHm_Chr2g0175341 RchiOBHm_Chr2g0175361 RchiOBHm_Chr2g0175371 RchiOBHm_Chr3g0470491 RchiOBHm_Chr3g0480881 RchiOBHm_Chr3g0485511 RchiOBHm_Chr5g0020741 RchiOBHm_Chr5g0020901 RchiOBHm_Chr5g0020931 RchiOBHm_Chr5g0020941 RchiOBHm_Chr5g0020961 RchiOBHm_Chr5g0020971 RchiOBHm_Chr5g0021451 RchiOBHm_Chr5g0021531 RchiOBHm_Chr5g0021831 RchiOBHm_Chr5g0021841 RchiOBHm_Chr5g0021931 RchiOBHm_Chr5g0021941 RchiOBHm_Chr5g0021981 RchiOBHm_Chr5g0021991 RchiOBHm_Chr5g0022011 RchiOBHm_Chr5g0022181 RchiOBHm_Chr5g0022191 RchiOBHm_Chr5g0022211 RchiOBHm_Chr5g0022221 RchiOBHm_Chr5g0022231 RchiOBHm_Chr5g0022291 RchiOBHm_Chr5g0022301 RchiOBHm_Chr5g0022331 RchiOBHm_Chr5g0022361 RchiOBHm_Chr5g0022371 RchiOBHm_Chr5g0022381 RchiOBHm_Chr5g0022401 RchiOBHm_Chr5g0022431 RchiOBHm_Chr5g0022451 RchiOBHm_Chr5g0022541 RchiOBHm_Chr5g0022591 RchiOBHm_Chr5g0022601 RchiOBHm_Chr5g0022701 RchiOBHm_Chr5g0022741 RchiOBHm_Chr5g0022791 RchiOBHm_Chr5g0022811 RchiOBHm_Chr5g0022851 RchiOBHm_Chr5g0029441 RchiOBHm_Chr5g0041631 RchiOBHm_Chr5g0069391 RchiOBHm_Chr6g0273811 RchiOBHm_Chr6g0273831 RchiOBHm_Chr6g0275331 RchiOBHm_Chr7g0219061
rosa_laevigata RLG00000002463 RLG00000020007 RLG00000020008 RLG00000022320 RLG00000022321 RLG00000023446 RLG00000030742 RLG00000030743 RLG00000030747 RLG00000032557 RLG00000032564 RLG00000032571 RLG00000032573 RLG00000032574 RLG00000032612 RLG00000032633 RLG00000032636 RLG00000032638 RLG00000032650 RLG00000032651 RLG00000032652 RLG00000032653 RLG00000032655 RLG00000032673 RLG00000032678 RLG00000032769 RLG00000032857 RLG00000033168 RLG00000033465 RLG00000034086 RLG00000034222 RLG00000035290
rosa_multiflora Rmu_co8143358.1_g000001 Rmu_co8518791.1_g000001 Rmu_sc0000178.1_g000008 Rmu_sc0000178.1_g000014 Rmu_sc0000401.1_g000005 Rmu_sc0000401.1_g000013 Rmu_sc0000401.1_g000017 Rmu_sc0000401.1_g000018 Rmu_sc0000401.1_g000024 Rmu_sc0000401.1_g000025 Rmu_sc0000576.1_g000020 Rmu_sc0001585.1_g000003 Rmu_sc0001585.1_g000005 Rmu_sc0001585.1_g000008 Rmu_sc0001784.1_g000006 Rmu_sc0001784.1_g000011 Rmu_sc0001784.1_g000022 Rmu_sc0001784.1_g000028 Rmu_sc0002052.1_g000004 Rmu_sc0002052.1_g000011 Rmu_sc0002277.1_g000003 Rmu_sc0002277.1_g000006 Rmu_sc0002277.1_g000024 Rmu_sc0002658.1_g000012 Rmu_sc0003512.1_g000004 Rmu_sc0003512.1_g000007 Rmu_sc0004180.1_g000016 Rmu_sc0004180.1_g000029 Rmu_sc0004180.1_g000034 Rmu_sc0005639.1_g000008 Rmu_sc0005639.1_g000023 Rmu_sc0006070.1_g000016 Rmu_sc0006070.1_g000017 Rmu_sc0006966.1_g000021 Rmu_sc0006966.1_g000023 Rmu_sc0007239.1_g000003 Rmu_sc0008460.1_g000010 Rmu_sc0009984.1_g000008 Rmu_sc0010181.1_g000005 Rmu_sc0010181.1_g000010 Rmu_sc0010503.1_g000006 Rmu_sc0011646.1_g000003 Rmu_sc0012984.1_g000011 Rmu_sc0016972.1_g000005 Rmu_sc0016972.1_g000008 Rmu_sc0023070.1_g000003 Rmu_sc0025660.1_g000001 Rmu_ssc0000322.1_g000019
rosa_roxburghii Rroxscaffold_1G00038860 Rroxscaffold_1G00053490 Rroxscaffold_1G00053500 Rroxscaffold_1G00054230 Rroxscaffold_1G00056460 Rroxscaffold_1G00056470 Rroxscaffold_1G00056480 Rroxscaffold_1G00056500 Rroxscaffold_1G00056510 Rroxscaffold_1G00056620 Rroxscaffold_1G00056690 Rroxscaffold_1G00056710 Rroxscaffold_1G00056720 Rroxscaffold_1G00056730 Rroxscaffold_1G00056740 Rroxscaffold_1G00056750 Rroxscaffold_1G00056760 Rroxscaffold_1G00056870 Rroxscaffold_1G00056900 Rroxscaffold_1G00057120 Rroxscaffold_1G00057560 Rroxscaffold_2G00077430 Rroxscaffold_2G00102160 Rroxscaffold_3G00231420 Rroxscaffold_3G00231430 Rroxscaffold_4G00297230 Rroxscaffold_4G00331570 Rroxscaffold_6G00396700 Rroxscaffold_6G00400940 Rroxscaffold_7G00192740
rosa_rugosa Rorug01G0004400 Rorug01G0004500 Rorug02G0377600 Rorug02G0378000 Rorug02G0582800 Rorug02G0583400 Rorug03G0187000 Rorug03G0218800 Rorug04G0081200 Rorug05G0062700 Rorug05G0062700 Rorug05G0063100 Rorug05G0063200 Rorug05G0063200 Rorug05G0063200 Rorug05G0067000 Rorug05G0069700 Rorug05G0069900 Rorug05G0070000 Rorug05G0070100 Rorug05G0070300 Rorug05G0070400 Rorug05G0070600 Rorug05G0070600 Rorug05G0072300 Rorug05G0072400 Rorug05G0072500 Rorug05G0072500 Rorug05G0072600.1 Rorug05G0072700 Rorug05G0072800 Rorug05G0072800 Rorug05G0072900 Rorug05G0073000 Rorug05G0073000 Rorug05G0073400 Rorug05G0073400 Rorug05G0073400 Rorug05G0074800 Rorug05G0075000 Rorug05G0114300 Rorug05G0194200 Rorug06G0097800
rosa_samantha Rh2AG401400 Rh2CG387600 Rh2CG417000 Rh2CG637400 Rh5CG169600 Rh5CG172100 Rh5CG175200 Rh5CG317100 Rh6DG187900
rosa_wichuraiana Rw1G000750 Rw1G000790 Rw1G000820 Rw1G000860 Rw1G000880 Rw1G000910 Rw2G035180 Rw2G035200 Rw2G035240 Rw2G054370 Rw2G054380 Rw5G013570 Rw5G013580 Rw5G013590 Rw5G013910 Rw5G013980 Rw5G014110 Rw5G014120 Rw5G014280 Rw5G014310 Rw5G014400 Rw5G014420 Rw5G014440 Rw5G014460 Rw5G014480 Rw5G014500 Rw5G014520 Rw5G014530 Rw5G042390

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 2 cut(s) 1515, 2025
Acc36I ACCTGC 1 cut(s) 2465
AccB1I GGYRCC 2 cut(s) 40, 1694
AccB7I CCANNNNNTGG 1 cut(s) 1220
AccI GTMKAC 2 cut(s) 2136, 2338
AciI CCGC 3 cut(s) 2388, 2528, 2564
AclI AACGTT 1 cut(s) 114
AclWI GGATC 4 cut(s) 245, 475, 1169, 2502
AcoI YGGCCR 1 cut(s) 437
AcuI CTGAAG 1 cut(s) 1046
AcvI CACGTG 1 cut(s) 1271
AdeI CACNNNGTG 1 cut(s) 2406
AfaI GTAC 3 cut(s) 1054, 1434, 1473
AfeI AGCGCT 1 cut(s) 1739
AfiI CCNNNNNNNGG 5 cut(s) 1029, 1220, 1243, 1301, 1481
AflIII ACRYGT 1 cut(s) 1268
AhlI ACTAGT 2 cut(s) 1049, 1712
AjnI CCWGG 2 cut(s) 970, 1731
AjuI GAANNNNNNNTTGG 4 cut(s) 297, 329, 1521, 1553
AloI GAACNNNNNNTCC 2 cut(s) 72, 104
Alw21I GWGCWC 2 cut(s) 1901, 2151
Alw26I GTCTC 9 cut(s) 77, 317, 631, 717, 1654, 2005, 2378, 2448, 2498
AlwI GGATC 4 cut(s) 245, 475, 1169, 2502
Ama87I CYCGRG 4 cut(s) 74, 714, 1854, 2309
Aor51HI AGCGCT 1 cut(s) 1739
AoxI GGCC 5 cut(s) 437, 1020, 1234, 2247, 2532
ApeKI GCWGC 9 cut(s) 164, 179, 263, 338, 398, 503, 1532, 1787, 2058
ArsI GACNNNNNNTTYG 2 cut(s) 1997, 2029
AseI ATTAAT 1 cut(s) 129
Asp700I GAANNNNTTC 2 cut(s) 932, 1378
AspA2I CCTAGG 1 cut(s) 1237
AspLEI GCGC 3 cut(s) 1276, 1740, 1787
AspS9I GGNCC 2 cut(s) 1991, 2477
AsuC2I CCSGG 1 cut(s) 244
AsuHPI GGTGA 7 cut(s) 46, 820, 863, 1142, 1203, 1553, 1699
AsuII TTCGAA 1 cut(s) 2500
AsuNHI GCTAGC 1 cut(s) 571
AvaI CYCGRG 4 cut(s) 74, 714, 1854, 2309
AvaII GGWCC 2 cut(s) 1991, 2477
AvrII CCTAGG 1 cut(s) 1237
BalI TGGCCA 1 cut(s) 439
BanI GGYRCC 2 cut(s) 40, 1694
BanII GRGCYC 4 cut(s) 1371, 1901, 2151, 2222
BarI GAAGNNNNNNTAC 2 cut(s) 1851, 1883
BauI CACGAG 2 cut(s) 213, 1256
BbrPI CACGTG 1 cut(s) 1271
BbsI GAAGAC 2 cut(s) 546, 2402
Bbv12I GWGCWC 2 cut(s) 1901, 2151
BbvI GCAGC 9 cut(s) 151, 191, 250, 350, 410, 490, 1519, 1799, 2070
BccI CCATC 6 cut(s) 649, 775, 1172, 1706, 1754, 1979
BcgI CGANNNNNNTGC 4 cut(s) 65, 99, 2453, 2487
BciT130I CCWGG 2 cut(s) 972, 1733
BclI TGATCA 1 cut(s) 352
BcnI CCSGG 1 cut(s) 244
BcoDI GTCTC 9 cut(s) 77, 317, 631, 717, 1654, 2005, 2378, 2448, 2498
BcuI ACTAGT 2 cut(s) 1049, 1712
BfoI RGCGCY 1 cut(s) 1741
BfuAI ACCTGC 1 cut(s) 2465
BlnI CCTAGG 1 cut(s) 1237
BmcAI AGTACT 1 cut(s) 1054
Bme1390I CCNGG 3 cut(s) 244, 972, 1733
Bme18I GGWCC 2 cut(s) 1991, 2477
BmeT110I CYCGRG 4 cut(s) 74, 714, 1854, 2309
BmgT120I GGNCC 2 cut(s) 1991, 2477
BmiI GGNNCC 4 cut(s) 42, 1326, 1696, 1730
BmrFI CCNGG 3 cut(s) 244, 972, 1733
BmsI GCATC 4 cut(s) 589, 1023, 2023, 2068
BmtI GCTAGC 1 cut(s) 575
BpiI GAAGAC 2 cut(s) 546, 2402
BplI GAGNNNNNCTC 2 cut(s) 2428, 2460
BpmI CTGGAG 1 cut(s) 1754
Bpu10I CCTNAGC 1 cut(s) 1560
Bpu14I TTCGAA 1 cut(s) 2500
BpuEI CTTGAG 7 cut(s) 831, 1263, 1726, 1885, 1915, 2115, 2371
BpuMI CCSGG 1 cut(s) 244
BsaAI YACGTR 1 cut(s) 1271
BsaI GGTCTC 2 cut(s) 1654, 2378
BsaJI CCNNGG 3 cut(s) 168, 243, 1237
BsaWI WCCGGW 1 cut(s) 382
BsaXI ACNNNNNCTCC 4 cut(s) 72, 102, 1394, 1424
Bsc4I CCNNNNNNNGG 5 cut(s) 1029, 1220, 1243, 1301, 1481
Bse1I ACTGG 1 cut(s) 831
Bse3DI GCAATG 3 cut(s) 469, 486, 2476
BseBI CCWGG 2 cut(s) 972, 1733
BseDI CCNNGG 3 cut(s) 168, 243, 1237
BseGI GGATG 6 cut(s) 679, 1038, 1183, 1656, 1990, 2540
BseLI CCNNNNNNNGG 5 cut(s) 1029, 1220, 1243, 1301, 1481
BseMI GCAATG 3 cut(s) 469, 486, 2476
BseMII CTCAG 8 cut(s) 261, 488, 576, 891, 1142, 1551, 1601, 2459
BseNI ACTGG 1 cut(s) 831
BseRI GAGGAG 1 cut(s) 1798
BseXI GCAGC 9 cut(s) 151, 191, 250, 350, 410, 490, 1519, 1799, 2070
BseYI CCCAGC 2 cut(s) 1284, 1301
BshFI GGCC 5 cut(s) 439, 1022, 1236, 2249, 2534
BshNI GGYRCC 2 cut(s) 40, 1694
BsiHKAI GWGCWC 2 cut(s) 1901, 2151
BsiHKCI CYCGRG 4 cut(s) 74, 714, 1854, 2309
BsiSI CCGG 3 cut(s) 204, 243, 383
BslFI GGGAC 1 cut(s) 798
BslI CCNNNNNNNGG 5 cut(s) 1029, 1220, 1243, 1301, 1481
BsmAI GTCTC 9 cut(s) 77, 317, 631, 717, 1654, 2005, 2378, 2448, 2498
BsmFI GGGAC 1 cut(s) 798
BsmI GAATGC 3 cut(s) 1296, 2081, 2561
BsnI GGCC 5 cut(s) 439, 1022, 1236, 2249, 2534
Bso31I GGTCTC 2 cut(s) 1654, 2378
BsoBI CYCGRG 4 cut(s) 74, 714, 1854, 2309
Bsp119I TTCGAA 1 cut(s) 2500
Bsp1286I GDGCHC 4 cut(s) 1371, 1901, 2151, 2222
Bsp143I GATC 6 cut(s) 250, 352, 467, 1161, 1890, 2507
Bsp19I CCATGG 1 cut(s) 168
BspACI CCGC 3 cut(s) 2388, 2528, 2564
BspANI GGCC 5 cut(s) 439, 1022, 1236, 2249, 2534
BspCNI CTCAG 8 cut(s) 262, 487, 577, 892, 1143, 1552, 1600, 2458
BspLI GGNNCC 4 cut(s) 42, 1326, 1696, 1730
BspMI ACCTGC 1 cut(s) 2465
BspOI GCTAGC 1 cut(s) 575
BspPI GGATC 4 cut(s) 245, 475, 1169, 2502
BspQI GCTCTTC 3 cut(s) 597, 678, 990
BspT104I TTCGAA 1 cut(s) 2500
BspT107I GGYRCC 2 cut(s) 40, 1694
BspTNI GGTCTC 2 cut(s) 1654, 2378
BsrDI GCAATG 3 cut(s) 469, 486, 2476
BsrI ACTGG 1 cut(s) 831
BssECI CCNNGG 3 cut(s) 168, 243, 1237
BssMI GATC 6 cut(s) 250, 352, 467, 1161, 1890, 2507
BssSI CACGAG 2 cut(s) 213, 1256
BssT1I CCWWGG 2 cut(s) 168, 1237
Bst2BI CACGAG 2 cut(s) 213, 1256
Bst2UI CCWGG 2 cut(s) 972, 1733
Bst4CI ACNGT 9 cut(s) 415, 548, 751, 1009, 1140, 1406, 1432, 1484, 2525
Bst6I CTCTTC 5 cut(s) 51, 597, 678, 990, 1178
BstBAI YACGTR 1 cut(s) 1271
BstBI TTCGAA 1 cut(s) 2500
BstC8I GCNNGC 4 cut(s) 460, 573, 2532, 2561
BstDSI CCRYGG 1 cut(s) 168
BstEII GGTNACC 1 cut(s) 1209
BstENI CCTNNNNNAGG 1 cut(s) 1027
BstF5I GGATG 6 cut(s) 679, 1038, 1183, 1656, 1990, 2540
BstH2I RGCGCY 1 cut(s) 1741
BstHHI GCGC 3 cut(s) 1276, 1740, 1787
BstKTI GATC 6 cut(s) 253, 355, 470, 1164, 1893, 2510
BstMAI GTCTC 9 cut(s) 77, 317, 631, 717, 1654, 2005, 2378, 2448, 2498
BstMBI GATC 6 cut(s) 250, 352, 467, 1161, 1890, 2507
BstNI CCWGG 2 cut(s) 972, 1733
BstPI GGTNACC 1 cut(s) 1209
BstSCI CCNGG 3 cut(s) 242, 970, 1731
BstV1I GCAGC 9 cut(s) 151, 191, 250, 350, 410, 490, 1519, 1799, 2070
BstV2I GAAGAC 2 cut(s) 546, 2402
BstX2I RGATCY 2 cut(s) 250, 467
BstYI RGATCY 2 cut(s) 250, 467
BsuRI GGCC 5 cut(s) 439, 1022, 1236, 2249, 2534
BtgI CCRYGG 1 cut(s) 168
BtsCI GGATG 6 cut(s) 679, 1038, 1183, 1656, 1990, 2540
BtsI GCAGTG 2 cut(s) 1908, 2324
BtsIMutI CAGTG 6 cut(s) 756, 897, 1136, 1908, 2073, 2324
BveI ACCTGC 1 cut(s) 2465
Cac8I GCNNGC 4 cut(s) 460, 573, 2532, 2561
CfoI GCGC 3 cut(s) 1276, 1740, 1787
Cfr13I GGNCC 2 cut(s) 1991, 2477
Csp6I GTAC 3 cut(s) 1053, 1433, 1472
CviAII CATG 9 cut(s) 169, 319, 356, 1647, 1671, 1927, 1940, 2140, 2430
CviQI GTAC 3 cut(s) 1053, 1433, 1472
DpnI GATC 6 cut(s) 252, 354, 469, 1163, 1892, 2509
DpnII GATC 6 cut(s) 250, 352, 467, 1161, 1890, 2507
DraI TTTAAA 1 cut(s) 1446
DraIII CACNNNGTG 1 cut(s) 2406
EaeI YGGCCR 1 cut(s) 437
Eam1104I CTCTTC 5 cut(s) 51, 597, 678, 990, 1178
EarI CTCTTC 5 cut(s) 51, 597, 678, 990, 1178
Ecl136II GAGCTC 2 cut(s) 1899, 2149
Eco130I CCWWGG 2 cut(s) 168, 1237
Eco147I AGGCCT 3 cut(s) 1022, 1236, 2534
Eco24I GRGCYC 4 cut(s) 1371, 1901, 2151, 2222
Eco31I GGTCTC 2 cut(s) 1654, 2378
Eco47I GGWCC 2 cut(s) 1991, 2477
Eco47III AGCGCT 1 cut(s) 1739
Eco53kI GAGCTC 2 cut(s) 1899, 2149
Eco57I CTGAAG 1 cut(s) 1046
Eco72I CACGTG 1 cut(s) 1271
Eco88I CYCGRG 4 cut(s) 74, 714, 1854, 2309
Eco91I GGTNACC 1 cut(s) 1209
EcoICRI GAGCTC 2 cut(s) 1899, 2149
EcoNI CCTNNNNNAGG 1 cut(s) 1027
EcoO65I GGTNACC 1 cut(s) 1209
EcoRI GAATTC 4 cut(s) 920, 932, 1580, 2502
EcoRII CCWGG 2 cut(s) 970, 1731
EcoT14I CCWWGG 2 cut(s) 168, 1237
EcoT22I ATGCAT 2 cut(s) 488, 2083
EcoT38I GRGCYC 4 cut(s) 1371, 1901, 2151, 2222
ErhI CCWWGG 2 cut(s) 168, 1237
FaeI CATG 9 cut(s) 172, 322, 359, 1650, 1674, 1930, 1943, 2143, 2433
FaqI GGGAC 1 cut(s) 798
FatI CATG 9 cut(s) 168, 318, 355, 1646, 1670, 1926, 1939, 2139, 2429
FauNDI CATATG 3 cut(s) 1387, 1399, 2125
FbaI TGATCA 1 cut(s) 352
FblI GTMKAC 2 cut(s) 2136, 2338
FokI GGATG 6 cut(s) 686, 1045, 1190, 1663, 1997, 2527
FriOI GRGCYC 4 cut(s) 1371, 1901, 2151, 2222
GlaI GCGC 3 cut(s) 1275, 1739, 1786
GsaI CCCAGC 2 cut(s) 1288, 1305
GsuI CTGGAG 1 cut(s) 1754
HaeII RGCGCY 1 cut(s) 1741
HaeIII GGCC 5 cut(s) 439, 1022, 1236, 2249, 2534
HapII CCGG 3 cut(s) 204, 243, 383
HhaI GCGC 3 cut(s) 1276, 1740, 1787
Hin1II CATG 9 cut(s) 172, 322, 359, 1650, 1674, 1930, 1943, 2143, 2433
Hin6I GCGC 3 cut(s) 1274, 1738, 1785
HinP1I GCGC 3 cut(s) 1274, 1738, 1785
HindIII AAGCTT 3 cut(s) 187, 695, 2347
HpaII CCGG 3 cut(s) 204, 243, 383
HphI GGTGA 7 cut(s) 46, 820, 863, 1142, 1203, 1553, 1699
Hpy166II GTNNAC 3 cut(s) 218, 2137, 2339
Hpy8I GTNNAC 3 cut(s) 218, 2137, 2339
Hpy99I CGWCG 1 cut(s) 548
HpyCH4III ACNGT 9 cut(s) 415, 548, 751, 1009, 1140, 1406, 1432, 1484, 2525
HpyCH4IV ACGT 2 cut(s) 114, 1270
HpySE526I ACGT 2 cut(s) 114, 1270
Hsp92II CATG 9 cut(s) 172, 322, 359, 1650, 1674, 1930, 1943, 2143, 2433
HspAI GCGC 3 cut(s) 1274, 1738, 1785
Ksp22I TGATCA 1 cut(s) 352
Kzo9I GATC 6 cut(s) 250, 352, 467, 1161, 1890, 2507
LguI GCTCTTC 3 cut(s) 597, 678, 990
LmnI GCTCC 2 cut(s) 119, 1735
Lsp1109I GCAGC 9 cut(s) 151, 191, 250, 350, 410, 490, 1519, 1799, 2070
LweI GCATC 4 cut(s) 589, 1023, 2023, 2068
MaeII ACGT 2 cut(s) 114, 1270
MaeIII GTNAC 6 cut(s) 106, 751, 851, 1209, 1334, 1942
MalI GATC 6 cut(s) 252, 354, 469, 1163, 1892, 2509
MboI GATC 6 cut(s) 250, 352, 467, 1161, 1890, 2507
MfeI CAATTG 1 cut(s) 511
MflI RGATCY 2 cut(s) 250, 467
MhlI GDGCHC 4 cut(s) 1371, 1901, 2151, 2222
MlsI TGGCCA 1 cut(s) 439
MluNI TGGCCA 1 cut(s) 439
MlyI GAGTC 5 cut(s) 233, 809, 851, 911, 2299
MmeI TCCRAC 3 cut(s) 97, 1122, 2544
Mox20I TGGCCA 1 cut(s) 439
Mph1103I ATGCAT 2 cut(s) 488, 2083
MroXI GAANNNNTTC 2 cut(s) 932, 1378
MscI TGGCCA 1 cut(s) 439
MseI TTAA 7 cut(s) 129, 1103, 1199, 1445, 1479, 1703, 1958
MslI CAYNNNNRTG 1 cut(s) 413
Msp20I TGGCCA 1 cut(s) 439
MspA1I CMGCKG 2 cut(s) 182, 1331
MspI CCGG 3 cut(s) 204, 243, 383
MspR9I CCNGG 3 cut(s) 244, 972, 1733
MunI CAATTG 1 cut(s) 511
Mva1269I GAATGC 3 cut(s) 1296, 2081, 2561
MvaI CCWGG 2 cut(s) 972, 1733
NciI CCSGG 1 cut(s) 244
NcoI CCATGG 1 cut(s) 168
NdeI CATATG 3 cut(s) 1387, 1399, 2125
NdeII GATC 6 cut(s) 250, 352, 467, 1161, 1890, 2507
NheI GCTAGC 1 cut(s) 571
NlaIII CATG 9 cut(s) 172, 322, 359, 1650, 1674, 1930, 1943, 2143, 2433
NlaIV GGNNCC 4 cut(s) 42, 1326, 1696, 1730
NmuCI GTSAC 4 cut(s) 106, 751, 851, 1209
NsiI ATGCAT 2 cut(s) 488, 2083
NspV TTCGAA 1 cut(s) 2500
PaeR7I CTCGAG 1 cut(s) 74
PceI AGGCCT 3 cut(s) 1022, 1236, 2534
PciSI GCTCTTC 3 cut(s) 597, 678, 990
PcsI WCGNNNNNNNCGW 1 cut(s) 1488
PctI GAATGC 3 cut(s) 1296, 2081, 2561
PdmI GAANNNNTTC 2 cut(s) 932, 1378
PfeI GAWTC 7 cut(s) 137, 619, 879, 1145, 1155, 1640, 1774
PflMI CCANNNNNTGG 1 cut(s) 1220
PfoI TCCNGGA 1 cut(s) 1731
PleI GAGTC 5 cut(s) 233, 808, 851, 910, 2299
PmaCI CACGTG 1 cut(s) 1271
PmlI CACGTG 1 cut(s) 1271
PpsI GAGTC 5 cut(s) 233, 808, 851, 910, 2299
Ppu21I YACGTR 1 cut(s) 1271
PshBI ATTAAT 1 cut(s) 129
PsiI TTATAA 2 cut(s) 1515, 2025
Psp124BI GAGCTC 2 cut(s) 1901, 2151
Psp1406I AACGTT 1 cut(s) 114
Psp6I CCWGG 2 cut(s) 970, 1731
PspCI CACGTG 1 cut(s) 1271
PspEI GGTNACC 1 cut(s) 1209
PspFI CCCAGC 2 cut(s) 1284, 1301
PspGI CCWGG 2 cut(s) 970, 1731
PspN4I GGNNCC 4 cut(s) 42, 1326, 1696, 1730
PspPI GGNCC 2 cut(s) 1991, 2477
PsuI RGATCY 2 cut(s) 250, 467
PvuII CAGCTG 2 cut(s) 182, 1331
RsaI GTAC 3 cut(s) 1054, 1434, 1473
RsaNI GTAC 3 cut(s) 1053, 1433, 1472
RseI CAYNNNNRTG 1 cut(s) 413
SacI GAGCTC 2 cut(s) 1901, 2151
SapI GCTCTTC 3 cut(s) 597, 678, 990
SaqAI TTAA 7 cut(s) 129, 1103, 1199, 1445, 1479, 1703, 1958
Sau3AI GATC 6 cut(s) 250, 352, 467, 1161, 1890, 2507
Sau96I GGNCC 2 cut(s) 1991, 2477
ScaI AGTACT 1 cut(s) 1054
SchI GAGTC 5 cut(s) 233, 809, 851, 911, 2299
ScrFI CCNGG 3 cut(s) 244, 972, 1733
SduI GDGCHC 4 cut(s) 1371, 1901, 2151, 2222
SfaNI GCATC 4 cut(s) 589, 1023, 2023, 2068
Sfr274I CTCGAG 1 cut(s) 74
SfuI TTCGAA 1 cut(s) 2500
SinI GGWCC 2 cut(s) 1991, 2477
SlaI CTCGAG 1 cut(s) 74
SmiI ATTTAAAT 1 cut(s) 1446
SmiMI CAYNNNNRTG 1 cut(s) 413
SmlI CTYRAG 8 cut(s) 74, 846, 1278, 1741, 1894, 1900, 2130, 2350
SmoI CTYRAG 8 cut(s) 74, 846, 1278, 1741, 1894, 1900, 2130, 2350
SpeI ACTAGT 2 cut(s) 1049, 1712
SseBI AGGCCT 3 cut(s) 1022, 1236, 2534
SsiI CCGC 3 cut(s) 2388, 2528, 2564
SstI GAGCTC 2 cut(s) 1901, 2151
StuI AGGCCT 3 cut(s) 1022, 1236, 2534
StyD4I CCNGG 3 cut(s) 242, 970, 1731
StyI CCWWGG 2 cut(s) 168, 1237
SwaI ATTTAAAT 1 cut(s) 1446
TaaI ACNGT 9 cut(s) 415, 548, 751, 1009, 1140, 1406, 1432, 1484, 2525
TaiI ACGT 2 cut(s) 117, 1273
TaqI TCGA 7 cut(s) 75, 653, 988, 2031, 2500, 2506, 2553
TaqII GACCGA 1 cut(s) 902
TatI WGTACW 1 cut(s) 1052
TauI GCSGC 1 cut(s) 2566
TfiI GAWTC 7 cut(s) 137, 619, 879, 1145, 1155, 1640, 1774
Tru1I TTAA 7 cut(s) 129, 1103, 1199, 1445, 1479, 1703, 1958
Tru9I TTAA 7 cut(s) 129, 1103, 1199, 1445, 1479, 1703, 1958
TscAI CASTG 6 cut(s) 756, 904, 1143, 1915, 2080, 2324
TseFI GTSAC 4 cut(s) 106, 751, 851, 1209
TseI GCWGC 9 cut(s) 164, 179, 263, 338, 398, 503, 1532, 1787, 2058
Tsp45I GTSAC 4 cut(s) 106, 751, 851, 1209
TspGWI ACGGA 1 cut(s) 2533
TspRI CASTG 6 cut(s) 756, 904, 1143, 1915, 2080, 2324
Van91I CCANNNNNTGG 1 cut(s) 1220
VpaK11BI GGWCC 2 cut(s) 1991, 2477
VspI ATTAAT 1 cut(s) 129
XagI CCTNNNNNAGG 1 cut(s) 1027
XbaI TCTAGA 1 cut(s) 2254
XhoI CTCGAG 1 cut(s) 74
XmaJI CCTAGG 1 cut(s) 1237
XmiI GTMKAC 2 cut(s) 2136, 2338
XmnI GAANNNNTTC 2 cut(s) 932, 1378
ZrmI AGTACT 1 cut(s) 1054
Zsp2I ATGCAT 2 cut(s) 488, 2083
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.