RLG00000023446

LRR receptor-like serine threonine-protein kinase

Basic Information

Type: gene
Biological Identity
rosa_laevigata
Chr5
Physical Location & Seq
Reverse (-)
23890054 .. 23893622
3569 bp
Loading structure...
UTR
Exon/CDS
Intron
RLM00000023446

Sequence Viewer

Length: 2031 bp
ATGGGTACCTATGCTCACTGGTTAGCCCTCTTGTTTTTGGCCTCTTCATTTCTACATACCACTAAACACTGTTTGGCTGATAGAGCTCCAGGAAGTGTGAAATCATGCATTGAGGGAGAGAGACGCGCCCTTTTACGCTTTAAAGAAGACGTCACTGATCCTTCTGGTAGGCTTTCTTCTTGGGTGGGTTACGATTGTTGTCACTGGAAAGGAATCTCATGCGACAATAGTACGGGTCATATTGCAAAGATGGACCTTCGGAATACATATCCAGTTCCATATGCAGTTATATATCCATATTCCATGTATAAAAATGGACCGGATCGGCAGAAGTTGGCTTATAAACGGTCTTGCTTGGGAGGTAAGATTAATCATTCTTTGCTTAGCTTGAAGCATTTATATTACCTAGACCTGAGCTTGAATGACTTTGGAGGGATTCAAATTCCGAAGTTCTTTGGACAGCTTAAAAGTTTGAGGTATCTCAATCTCTCCATGACATCTTTGCAGTCATTTGGTGGAGAGATTCCCCCTCATCTTGGAGAGAACCTTCCACTCTCATTGAAAACCAATAACCTCACATCACTTTTGGTTTTTGATATTTCACATAGTTTTATTTATTCTTCGTTTCCTAGCTGGTTTTTCAATCTCACCAGTCTCACAAAATTCAACCTAAGGGAGAACTCTTTCATTGGTCCTTTTCCTGATGAATTCTCAAACCTCAAGTCTCTGGAATACCTTGATCTATCGAGTACTGGACTCAAAGGTCGAATTCCCAAACTCATTGGAAACTTTTGCAAGCTAAGGATATTAAACCTTGCTGAAAACAAATTGGATGGGGGTGTTGAAGAACTTCTGTCTGTTTTCTCATATTGTACAGAGAGTCCATTGCAGTCCCTAGATTTGTCTTCTAATGAGATGATGAGCGAACTACCAACCTCAATTGGAATGCCAAAAATTCTGCAGTACCTTTACCTGAGCGGCAACCACTTTTGGGGCTCAATTCCAGAATCCATTGGAAACTTGTCATCATTGAGAGCATTGGACCTCAGTAGTAATGATATGAATGGGTCCATTCCTGAAAGTTTAGGACAACTCTCTCAATTAGTTGACCTAGATCTGTCAGGGAATGTATGGGAAGGCATTTTAGCTGATGCCCATTTCATAAATCTCACAGCATTACAACACTTGGCAGTAGGAACACACTCATATGAGTACCTCCATTTTATGCCCAAAGCGAGTGGAGACTCGAACAGAGGTATGTCACTCATCTTCAATGTAACTTATGAGTGGGTTCCCCCTTTCAAGCTTCACACAATTTACATTGACAATTGTCAAGTGGGTCCTAGCTTCGGTGTATGGCTTCAATCTCAAACTCAGTTATCAGAAGTCACCCTTACTAGTACTGGAATCTCTGGCACATTACCAGAGGCATGGCTCTTGAAGATCTCTTCCCAAGTTGAATATTTAGATTTATCTAACAATCAACTCTCTGGAAAGCTTCCTATTCTTTGGCTACGCGACATGAGTTATCCTGAAGAAACAACAGTCATTTCCAAAGGACAAGAACTCGAATATGGAATTCCCAATTTGGATTTGGTAAAGAGTATTGATCTCTCATCGAATCAGTTGAAAGGTGATATTCCTGAAGCAATAACCAAACTTGTTGGATTGGGTATCCTGAACCTGTCGAGGAATCAATTAAATGGAAACATTCCCTCCAAGATAGGAAACTTGCATTGGCTGGAAACTCTTGATCTTTCTCACAATCACCTTTCAGGGAGGATTCCTCAGAGCTTTTTTTCTTTGACGTCACTGTCTCACTTGAACTTGTCTTATAACAACTTGACAGGAAGAATTCCTTCGGGAAACCAACTCCAAACACTTGAAGATTCATCCATATATGAGGGGAATCCGTCACTGTGCGGGGTTCCTCTTTCTGATTGCCCAGGAGATGACAGACCGATTTCTCCAAAAGATGATAAAGATGAAGATGATTATGGAAGTCCATTGCAGAGTCTGGTGACATGCTAG

Protein Analysis

677

Amino Acids

75.08

Weight (kDa)

5.56

Isoelectric Point (pI)

41.08

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
LRRNT_2 PF08263 39 - 75 2.6e-12 Leucine rich repeat N-terminal domain
LRR_14 PF23598 125 - 309 2.5e-10 Leucine-rich repeat region
LRR_8 PF13855 195 - 253 5.6e-09 Leucine rich repeat
LRR_14 PF23598 296 - 464 1.9e-11 Leucine-rich repeat region
LRR_8 PF13855 320 - 376 4.4e-08 Leucine rich repeat
LRR_14 PF23598 536 - 631 4e-09 Leucine-rich repeat region
LRR_8 PF13855 576 - 615 1.2e-06 Leucine rich repeat
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready

Orthologous Genes (Group: OG0000048)

Species Orthologous Gene IDs
arabidopsis_thaliana AT2G34930
fragaria_vesca FvH4_3g12670 FvH4_3g12672 FvH4_3g12740 FvH4_3g12742 FvH4_3g12770 FvH4_3g12770 FvH4_3g12860 FvH4_3g12890 FvH4_3g13431 FvH4_3g13433 FvH4_3g13435 FvH4_3g13470 FvH4_3g13470 FvH4_3g13480 FvH4_3g13562 FvH4_3g13580 FvH4_3g13600 FvH4_3g13600 FvH4_3g13600 FvH4_3g13600 FvH4_3g13600 FvH4_3g13600 FvH4_3g13610 FvH4_3g13620 FvH4_3g13620 FvH4_3g23240 FvH4_3g32910 FvH4_3g35070 FvH4_3g45520 FvH4_5g08430 FvH4_5g08450 FvH4_6g53230 FvH4_6g53300
malus_domestica MD05G1217600.v1.1 MD05G1217700.v1.1 MD05G1224700.v1.1 MD05G1225100.v1.1 MD05G1225300.v1.1 MD05G1225400.v1.1 MD05G1235900.v1.1 MD05G1236100.v1.1 MD05G1236300.v1.1 MD05G1237200.v1.1 MD05G1241600.v1.1 MD05G1245700.v1.1 MD05G1245800.v1.1 MD05G1245900.v1.1 MD05G1246000.v1.1 MD05G1246100.v1.1 MD05G1246300.v1.1 MD05G1246400.v1.1 MD05G1246500.v1.1 MD05G1248100.v1.1 MD05G1248200.v1.1 MD05G1264300.v1.1 MD05G1275900.v1.1 MD07G1051400.v1.1 MD09G1012600.v1.1 MD09G1012700.v1.1 MD09G1012800.v1.1 MD10G1221400.v1.1 MD10G1221500.v1.1 MD10G1221600.v1.1 MD10G1221900.v1.1 MD10G1222200.v1.1 MD10G1222400.v1.1 MD10G1222500.v1.1 MD10G1222900.v1.1 MD10G1223000.v1.1 MD10G1223100.v1.1 MD10G1223500.v1.1 MD10G1228000.v1.1 MD12G1019600.v1.1 MD12G1020000.v1.1 MD12G1020100.v1.1 MD17G1013200.v1.1 MD17G1013300.v1.1 MD17G1013400.v1.1
prunus_persica Prupe.1G060500_v2.0.a1 Prupe.1G100100_v2.0.a1 Prupe.3G124000_v2.0.a1 Prupe.3G304400_v2.0.a1 Prupe.4G116800_v2.0.a1 Prupe.4G116900_v2.0.a1 Prupe.4G117000_v2.0.a1 Prupe.4G121800_v2.0.a1 Prupe.4G121900_v2.0.a1 Prupe.4G122000_v2.0.a1 Prupe.4G122100_v2.0.a1 Prupe.4G122200_v2.0.a1 Prupe.4G122300_v2.0.a1 Prupe.4G122500_v2.0.a1 Prupe.4G122600_v2.0.a1 Prupe.4G122800_v2.0.a1 Prupe.4G122900_v2.0.a1 Prupe.4G123000_v2.0.a1 Prupe.4G123100_v2.0.a1 Prupe.4G123200_v2.0.a1 Prupe.4G131500_v2.0.a1 Prupe.4G131600_v2.0.a1 Prupe.7G032500_v2.0.a1 Prupe.7G032900_v2.0.a1 Prupe.7G033000_v2.0.a1 Prupe.7G033100_v2.0.a1 Prupe.7G033300_v2.0.a1 Prupe.7G033600_v2.0.a1 Prupe.7G034600_v2.0.a1 Prupe.7G040200_v2.0.a1 Prupe.7G059200_v2.0.a1
pyrus_communis pycom05g20580 pycom05g20590 pycom05g20760 pycom05g20800 pycom05g21280 pycom05g21290 pycom05g21820 pycom05g21830 pycom05g22180 pycom05g22190 pycom05g22210 pycom05g22450 pycom05g22460 pycom05g22470 pycom05g22480 pycom05g22490 pycom05g23770 pycom05g23780 pycom05g24050 pycom05g24060 pycom07g03910 pycom10g18700 pycom10g18720 pycom10g18730 pycom10g18740 pycom10g19150 pycom111g01060 pycom12g01660 pycom12g01690 pycom12g01720 pycom12g01740 pycom12g01750 pycom12g01770 pycom12g01810 pycom12g01820 pycom12g01830 pycom12g01840 pycom12g01870 pycom12g01900 pycom17g01060 pycom17g01070
rosa_chinensis RchiOBHm_Chr1g0315041 RchiOBHm_Chr1g0315051 RchiOBHm_Chr1g0315071 RchiOBHm_Chr1g0315161 RchiOBHm_Chr1g0315211 RchiOBHm_Chr1g0315251 RchiOBHm_Chr1g0315321 RchiOBHm_Chr1g0315391 RchiOBHm_Chr1g0315451 RchiOBHm_Chr1g0315481 RchiOBHm_Chr1g0315551 RchiOBHm_Chr1g0315601 RchiOBHm_Chr1g0315621 RchiOBHm_Chr1g0359221 RchiOBHm_Chr2g0142981 RchiOBHm_Chr2g0143001 RchiOBHm_Chr2g0143061 RchiOBHm_Chr2g0143091 RchiOBHm_Chr2g0175321 RchiOBHm_Chr2g0175341 RchiOBHm_Chr2g0175361 RchiOBHm_Chr2g0175371 RchiOBHm_Chr3g0470491 RchiOBHm_Chr3g0480881 RchiOBHm_Chr3g0485511 RchiOBHm_Chr5g0020741 RchiOBHm_Chr5g0020901 RchiOBHm_Chr5g0020931 RchiOBHm_Chr5g0020941 RchiOBHm_Chr5g0020961 RchiOBHm_Chr5g0020971 RchiOBHm_Chr5g0021451 RchiOBHm_Chr5g0021531 RchiOBHm_Chr5g0021831 RchiOBHm_Chr5g0021841 RchiOBHm_Chr5g0021931 RchiOBHm_Chr5g0021941 RchiOBHm_Chr5g0021981 RchiOBHm_Chr5g0021991 RchiOBHm_Chr5g0022011 RchiOBHm_Chr5g0022181 RchiOBHm_Chr5g0022191 RchiOBHm_Chr5g0022211 RchiOBHm_Chr5g0022221 RchiOBHm_Chr5g0022231 RchiOBHm_Chr5g0022291 RchiOBHm_Chr5g0022301 RchiOBHm_Chr5g0022331 RchiOBHm_Chr5g0022361 RchiOBHm_Chr5g0022371 RchiOBHm_Chr5g0022381 RchiOBHm_Chr5g0022401 RchiOBHm_Chr5g0022431 RchiOBHm_Chr5g0022451 RchiOBHm_Chr5g0022541 RchiOBHm_Chr5g0022591 RchiOBHm_Chr5g0022601 RchiOBHm_Chr5g0022701 RchiOBHm_Chr5g0022741 RchiOBHm_Chr5g0022791 RchiOBHm_Chr5g0022811 RchiOBHm_Chr5g0022851 RchiOBHm_Chr5g0029441 RchiOBHm_Chr5g0041631 RchiOBHm_Chr5g0069391 RchiOBHm_Chr6g0273811 RchiOBHm_Chr6g0273831 RchiOBHm_Chr6g0275331 RchiOBHm_Chr7g0219061
rosa_laevigata RLG00000002463 RLG00000020007 RLG00000020008 RLG00000022320 RLG00000022321 RLG00000023446 RLG00000030742 RLG00000030743 RLG00000030747 RLG00000032557 RLG00000032564 RLG00000032571 RLG00000032573 RLG00000032574 RLG00000032612 RLG00000032633 RLG00000032636 RLG00000032638 RLG00000032650 RLG00000032651 RLG00000032652 RLG00000032653 RLG00000032655 RLG00000032673 RLG00000032678 RLG00000032769 RLG00000032857 RLG00000033168 RLG00000033465 RLG00000034086 RLG00000034222 RLG00000035290
rosa_multiflora Rmu_co8143358.1_g000001 Rmu_co8518791.1_g000001 Rmu_sc0000178.1_g000008 Rmu_sc0000178.1_g000014 Rmu_sc0000401.1_g000005 Rmu_sc0000401.1_g000013 Rmu_sc0000401.1_g000017 Rmu_sc0000401.1_g000018 Rmu_sc0000401.1_g000024 Rmu_sc0000401.1_g000025 Rmu_sc0000576.1_g000020 Rmu_sc0001585.1_g000003 Rmu_sc0001585.1_g000005 Rmu_sc0001585.1_g000008 Rmu_sc0001784.1_g000006 Rmu_sc0001784.1_g000011 Rmu_sc0001784.1_g000022 Rmu_sc0001784.1_g000028 Rmu_sc0002052.1_g000004 Rmu_sc0002052.1_g000011 Rmu_sc0002277.1_g000003 Rmu_sc0002277.1_g000006 Rmu_sc0002277.1_g000024 Rmu_sc0002658.1_g000012 Rmu_sc0003512.1_g000004 Rmu_sc0003512.1_g000007 Rmu_sc0004180.1_g000016 Rmu_sc0004180.1_g000029 Rmu_sc0004180.1_g000034 Rmu_sc0005639.1_g000008 Rmu_sc0005639.1_g000023 Rmu_sc0006070.1_g000016 Rmu_sc0006070.1_g000017 Rmu_sc0006966.1_g000021 Rmu_sc0006966.1_g000023 Rmu_sc0007239.1_g000003 Rmu_sc0008460.1_g000010 Rmu_sc0009984.1_g000008 Rmu_sc0010181.1_g000005 Rmu_sc0010181.1_g000010 Rmu_sc0010503.1_g000006 Rmu_sc0011646.1_g000003 Rmu_sc0012984.1_g000011 Rmu_sc0016972.1_g000005 Rmu_sc0016972.1_g000008 Rmu_sc0023070.1_g000003 Rmu_sc0025660.1_g000001 Rmu_ssc0000322.1_g000019
rosa_roxburghii Rroxscaffold_1G00038860 Rroxscaffold_1G00053490 Rroxscaffold_1G00053500 Rroxscaffold_1G00054230 Rroxscaffold_1G00056460 Rroxscaffold_1G00056470 Rroxscaffold_1G00056480 Rroxscaffold_1G00056500 Rroxscaffold_1G00056510 Rroxscaffold_1G00056620 Rroxscaffold_1G00056690 Rroxscaffold_1G00056710 Rroxscaffold_1G00056720 Rroxscaffold_1G00056730 Rroxscaffold_1G00056740 Rroxscaffold_1G00056750 Rroxscaffold_1G00056760 Rroxscaffold_1G00056870 Rroxscaffold_1G00056900 Rroxscaffold_1G00057120 Rroxscaffold_1G00057560 Rroxscaffold_2G00077430 Rroxscaffold_2G00102160 Rroxscaffold_3G00231420 Rroxscaffold_3G00231430 Rroxscaffold_4G00297230 Rroxscaffold_4G00331570 Rroxscaffold_6G00396700 Rroxscaffold_6G00400940 Rroxscaffold_7G00192740
rosa_rugosa Rorug01G0004400 Rorug01G0004500 Rorug02G0377600 Rorug02G0378000 Rorug02G0582800 Rorug02G0583400 Rorug03G0187000 Rorug03G0218800 Rorug04G0081200 Rorug05G0062700 Rorug05G0062700 Rorug05G0063100 Rorug05G0063200 Rorug05G0063200 Rorug05G0063200 Rorug05G0067000 Rorug05G0069700 Rorug05G0069900 Rorug05G0070000 Rorug05G0070100 Rorug05G0070300 Rorug05G0070400 Rorug05G0070600 Rorug05G0070600 Rorug05G0072300 Rorug05G0072400 Rorug05G0072500 Rorug05G0072500 Rorug05G0072600.1 Rorug05G0072700 Rorug05G0072800 Rorug05G0072800 Rorug05G0072900 Rorug05G0073000 Rorug05G0073000 Rorug05G0073400 Rorug05G0073400 Rorug05G0073400 Rorug05G0074800 Rorug05G0075000 Rorug05G0114300 Rorug05G0194200 Rorug06G0097800
rosa_samantha Rh2AG401400 Rh2CG387600 Rh2CG417000 Rh2CG637400 Rh5CG169600 Rh5CG172100 Rh5CG175200 Rh5CG317100 Rh6DG187900
rosa_wichuraiana Rw1G000750 Rw1G000790 Rw1G000820 Rw1G000860 Rw1G000880 Rw1G000910 Rw2G035180 Rw2G035200 Rw2G035240 Rw2G054370 Rw2G054380 Rw5G013570 Rw5G013580 Rw5G013590 Rw5G013910 Rw5G013980 Rw5G014110 Rw5G014120 Rw5G014280 Rw5G014310 Rw5G014400 Rw5G014420 Rw5G014440 Rw5G014460 Rw5G014480 Rw5G014500 Rw5G014520 Rw5G014530 Rw5G042390

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 2 cut(s) 342, 1836
AasI GACNNNNNNGTC 2 cut(s) 762, 1813
AatII GACGTC 2 cut(s) 153, 1811
Acc65I GGTACC 1 cut(s) 5
AccB1I GGYRCC 1 cut(s) 5
AccBSI CCGCTC 1 cut(s) 978
AccII CGCG 2 cut(s) 126, 1518
AciI CCGC 2 cut(s) 978, 1923
AclWI GGATC 2 cut(s) 152, 330
AcsI RAATTY 7 cut(s) 441, 662, 707, 768, 954, 1578, 1854
AcuI CTGAAG 2 cut(s) 1554, 1665
AcyI GRCGYC 2 cut(s) 150, 1808
AfaI GTAC 7 cut(s) 7, 232, 751, 874, 965, 1214, 1402
AfiI CCNNNNNNNGG 3 cut(s) 536, 991, 1349
AhlI ACTAGT 1 cut(s) 1397
AjnI CCWGG 2 cut(s) 88, 1945
AjuI GAANNNNNNNTTGG 2 cut(s) 1720, 1752
Alw21I GWGCWC 1 cut(s) 88
Alw26I GTCTC 5 cut(s) 115, 659, 729, 1236, 1821
AlwI GGATC 2 cut(s) 152, 330
AlwNI CAGNNNCTG 1 cut(s) 2017
AoxI GGCC 1 cut(s) 39
ApoI RAATTY 7 cut(s) 441, 662, 707, 768, 954, 1578, 1854
ArsI GACNNNNNNTTYG 2 cut(s) 707, 739
AseI ATTAAT 1 cut(s) 369
Asp700I GAANNNNTTC 3 cut(s) 683, 849, 1858
Asp718I GGTACC 1 cut(s) 5
AspLEI GCGC 1 cut(s) 128
AspS9I GGNCC 6 cut(s) 253, 317, 692, 1042, 1068, 1340
AsuHPI GGTGA 4 cut(s) 640, 1381, 1646, 1760
AvaII GGWCC 6 cut(s) 253, 317, 692, 1042, 1068, 1340
AxyI CCTNAGG 1 cut(s) 671
BanI GGYRCC 1 cut(s) 5
BanII GRGCYC 2 cut(s) 88, 998
BarI GAAGNNNNNNTAC 2 cut(s) 160, 192
BbsI GAAGAC 2 cut(s) 153, 897
Bbv12I GWGCWC 1 cut(s) 88
BccI CCATC 2 cut(s) 244, 827
BciT130I CCWGG 2 cut(s) 90, 1947
BciVI GTATCC 1 cut(s) 1685
BcoDI GTCTC 5 cut(s) 115, 659, 729, 1236, 1821
BcuI ACTAGT 1 cut(s) 1397
BfaI CTAG 7 cut(s) 407, 630, 896, 1112, 1344, 1398, 2029
BfmI CTRYAG 1 cut(s) 959
BfuI GTATCC 1 cut(s) 1685
BglII AGATCT 2 cut(s) 1114, 1443
BisI GCNGC 1 cut(s) 979
BlpI GCTNAGC 1 cut(s) 383
BlsI GCNGC 1 cut(s) 980
BmcAI AGTACT 2 cut(s) 751, 1402
Bme1390I CCNGG 2 cut(s) 90, 1947
Bme18I GGWCC 6 cut(s) 253, 317, 692, 1042, 1068, 1340
BmgT120I GGNCC 6 cut(s) 253, 317, 692, 1042, 1068, 1340
BmiI GGNNCC 5 cut(s) 7, 1069, 1293, 1341, 1929
BmrFI CCNGG 2 cut(s) 90, 1947
BmsI GCATC 1 cut(s) 1141
BoxI GACNNNNGTC 1 cut(s) 1329
BpiI GAAGAC 2 cut(s) 153, 897
BplI GAGNNNNNCTC 2 cut(s) 1771, 1803
BpmI CTGGAG 1 cut(s) 72
Bpu10I CCTNAGC 3 cut(s) 413, 800, 974
Bpu1102I GCTNAGC 1 cut(s) 383
BpuEI CTTGAG 1 cut(s) 704
BsaHI GRCGYC 2 cut(s) 150, 1808
BsaJI CCNNGG 1 cut(s) 1945
BsaWI WCCGGW 1 cut(s) 319
BsaXI ACNNNNNCTCC 2 cut(s) 1700, 1730
Bsc4I CCNNNNNNNGG 3 cut(s) 536, 991, 1349
Bse1I ACTGG 6 cut(s) 23, 209, 272, 651, 757, 1408
Bse21I CCTNAGG 1 cut(s) 671
Bse3DI GCAATG 2 cut(s) 884, 2006
BseBI CCWGG 2 cut(s) 90, 1947
BseDI CCNNGG 1 cut(s) 1945
BseGI GGATG 2 cut(s) 838, 1892
BseLI CCNNNNNNNGG 3 cut(s) 536, 991, 1349
BseMI GCAATG 2 cut(s) 884, 2006
BseMII CTCAG 5 cut(s) 404, 965, 1060, 1388, 1802
BseNI ACTGG 6 cut(s) 23, 209, 272, 651, 757, 1408
Bsh1236I CGCG 2 cut(s) 126, 1518
BshFI GGCC 1 cut(s) 41
BshNI GGYRCC 1 cut(s) 5
BsiHKAI GWGCWC 1 cut(s) 88
BsiSI CCGG 1 cut(s) 320
BslFI GGGAC 1 cut(s) 877
BslI CCNNNNNNNGG 3 cut(s) 536, 991, 1349
BsmAI GTCTC 5 cut(s) 115, 659, 729, 1236, 1821
BsmBI CGTCTC 1 cut(s) 115
BsmFI GGGAC 1 cut(s) 877
BsmI GAATGC 1 cut(s) 951
BsnI GGCC 1 cut(s) 41
Bsp1286I GDGCHC 2 cut(s) 88, 998
Bsp1407I TGTACA 1 cut(s) 872
Bsp143I GATC 7 cut(s) 157, 322, 739, 1114, 1443, 1609, 1753
Bsp1720I GCTNAGC 1 cut(s) 383
BspACI CCGC 2 cut(s) 978, 1923
BspANI GGCC 1 cut(s) 41
BspCNI CTCAG 5 cut(s) 405, 966, 1059, 1387, 1801
BspFNI CGCG 2 cut(s) 126, 1518
BspLI GGNNCC 5 cut(s) 7, 1069, 1293, 1341, 1929
BspMAI CTGCAG 1 cut(s) 963
BspPI GGATC 2 cut(s) 152, 330
BspT107I GGYRCC 1 cut(s) 5
BsrBI CCGCTC 1 cut(s) 978
BsrDI GCAATG 2 cut(s) 884, 2006
BsrGI TGTACA 1 cut(s) 872
BsrI ACTGG 6 cut(s) 23, 209, 272, 651, 757, 1408
BssECI CCNNGG 1 cut(s) 1945
BssMI GATC 7 cut(s) 157, 322, 739, 1114, 1443, 1609, 1753
BssNI GRCGYC 2 cut(s) 150, 1808
Bst2UI CCWGG 2 cut(s) 90, 1947
Bst4CI ACNGT 5 cut(s) 71, 348, 1546, 1815, 1920
Bst6I CTCTTC 2 cut(s) 49, 1453
BstACI GRCGYC 2 cut(s) 150, 1808
BstAUI TGTACA 1 cut(s) 872
BstC8I GCNNGC 1 cut(s) 797
BstDEI CTNAG 8 cut(s) 383, 413, 671, 800, 974, 1046, 1374, 1788
BstF5I GGATG 2 cut(s) 838, 1892
BstFNI CGCG 2 cut(s) 126, 1518
BstHHI GCGC 1 cut(s) 128
BstKTI GATC 7 cut(s) 160, 325, 742, 1117, 1446, 1612, 1756
BstMAI GTCTC 5 cut(s) 115, 659, 729, 1236, 1821
BstMBI GATC 7 cut(s) 157, 322, 739, 1114, 1443, 1609, 1753
BstMWI GCNNNNNNNGC 1 cut(s) 83
BstNI CCWGG 2 cut(s) 90, 1947
BstNSI RCATGY 1 cut(s) 2028
BstPAI GACNNNNGTC 1 cut(s) 1329
BstSCI CCNGG 2 cut(s) 88, 1945
BstSFI CTRYAG 1 cut(s) 959
BstUI CGCG 2 cut(s) 126, 1518
BstV2I GAAGAC 2 cut(s) 153, 897
BstX2I RGATCY 2 cut(s) 1114, 1443
BstXI CCANNNNNNTGG 1 cut(s) 1431
BstYI RGATCY 2 cut(s) 1114, 1443
Bsu36I CCTNAGG 1 cut(s) 671
BsuI GTATCC 1 cut(s) 1685
BsuRI GGCC 1 cut(s) 41
BtsCI GGATG 2 cut(s) 838, 1892
BtsIMutI CAGTG 6 cut(s) 16, 67, 153, 202, 1811, 1916
Cac8I GCNNGC 1 cut(s) 797
CaiI CAGNNNCTG 1 cut(s) 2017
CfoI GCGC 1 cut(s) 128
Cfr13I GGNCC 6 cut(s) 253, 317, 692, 1042, 1068, 1340
CseI GACGC 1 cut(s) 132
Csp6I GTAC 7 cut(s) 6, 231, 750, 873, 964, 1213, 1401
CspCI CAANNNNNGTGG 4 cut(s) 540, 575, 1219, 1254
CviAII CATG 7 cut(s) 105, 219, 304, 493, 1431, 1522, 2025
CviQI GTAC 7 cut(s) 6, 231, 750, 873, 964, 1213, 1401
DdeI CTNAG 8 cut(s) 383, 413, 671, 800, 974, 1046, 1374, 1788
DpnI GATC 7 cut(s) 159, 324, 741, 1116, 1445, 1611, 1755
DpnII GATC 7 cut(s) 157, 322, 739, 1114, 1443, 1609, 1753
DraI TTTAAA 1 cut(s) 142
DrdI GACNNNNNNGTC 2 cut(s) 762, 1813
DseDI GACNNNNNNGTC 2 cut(s) 762, 1813
Eam1104I CTCTTC 2 cut(s) 49, 1453
EarI CTCTTC 2 cut(s) 49, 1453
Ecl136II GAGCTC 1 cut(s) 86
Eco24I GRGCYC 2 cut(s) 88, 998
Eco47I GGWCC 6 cut(s) 253, 317, 692, 1042, 1068, 1340
Eco53kI GAGCTC 1 cut(s) 86
Eco57I CTGAAG 2 cut(s) 1554, 1665
Eco81I CCTNAGG 1 cut(s) 671
EcoICRI GAGCTC 1 cut(s) 86
EcoO109I RGGNCCY 1 cut(s) 1340
EcoRI GAATTC 4 cut(s) 707, 768, 1578, 1854
EcoRII CCWGG 2 cut(s) 88, 1945
EcoT22I ATGCAT 1 cut(s) 110
EcoT38I GRGCYC 2 cut(s) 88, 998
Esp3I CGTCTC 1 cut(s) 115
FaeI CATG 7 cut(s) 108, 222, 307, 496, 1434, 1525, 2028
FalI AAGNNNNNCTT 4 cut(s) 1377, 1409, 1843, 1875
FaqI GGGAC 1 cut(s) 877
FatI CATG 7 cut(s) 104, 218, 303, 492, 1430, 1521, 2024
FauI CCCGC 1 cut(s) 1916
FauNDI CATATG 2 cut(s) 280, 1207
Fnu4HI GCNGC 1 cut(s) 979
FokI GGATG 2 cut(s) 845, 1879
FriOI GRGCYC 2 cut(s) 88, 998
Fsp4HI GCNGC 1 cut(s) 979
FspBI CTAG 7 cut(s) 407, 630, 896, 1112, 1344, 1398, 2029
GlaI GCGC 1 cut(s) 127
GluI GCNGC 1 cut(s) 979
GsuI CTGGAG 1 cut(s) 72
HaeIII GGCC 1 cut(s) 41
HapII CCGG 1 cut(s) 320
HgaI GACGC 1 cut(s) 132
HhaI GCGC 1 cut(s) 128
Hin1I GRCGYC 2 cut(s) 150, 1808
Hin1II CATG 7 cut(s) 108, 222, 307, 496, 1434, 1525, 2028
Hin6I GCGC 1 cut(s) 126
HinP1I GCGC 1 cut(s) 126
HincII GTYRAC 1 cut(s) 1108
HindII GTYRAC 1 cut(s) 1108
HindIII AAGCTT 2 cut(s) 1304, 1496
HpaII CCGG 1 cut(s) 320
HphI GGTGA 4 cut(s) 640, 1381, 1646, 1760
Hpy166II GTNNAC 1 cut(s) 1108
Hpy188I TCNGA 5 cut(s) 261, 447, 1384, 1791, 1939
Hpy8I GTNNAC 1 cut(s) 1108
HpyAV CCTTC 5 cut(s) 171, 266, 557, 1130, 1869
HpyCH4III ACNGT 5 cut(s) 71, 348, 1546, 1815, 1920
HpyCH4IV ACGT 2 cut(s) 150, 1808
HpyCH4V TGCA 9 cut(s) 108, 245, 284, 505, 795, 889, 961, 1735, 2011
HpyF10VI GCNNNNNNNGC 1 cut(s) 83
HpyF3I CTNAG 8 cut(s) 383, 413, 671, 800, 974, 1046, 1374, 1788
HpySE526I ACGT 2 cut(s) 150, 1808
Hsp92I GRCGYC 2 cut(s) 150, 1808
Hsp92II CATG 7 cut(s) 108, 222, 307, 496, 1434, 1525, 2028
HspAI GCGC 1 cut(s) 126
KpnI GGTACC 1 cut(s) 9
Kzo9I GATC 7 cut(s) 157, 322, 739, 1114, 1443, 1609, 1753
LmnI GCTCC 1 cut(s) 91
LweI GCATC 1 cut(s) 1141
MaeI CTAG 7 cut(s) 407, 630, 896, 1112, 1344, 1398, 2029
MaeII ACGT 2 cut(s) 150, 1808
MaeIII GTNAC 9 cut(s) 151, 188, 200, 1260, 1276, 1387, 1809, 1914, 2020
MalI GATC 7 cut(s) 159, 324, 741, 1116, 1445, 1611, 1755
MbiI CCGCTC 1 cut(s) 978
MboI GATC 7 cut(s) 157, 322, 739, 1114, 1443, 1609, 1753
MfeI CAATTG 2 cut(s) 939, 1327
MflI RGATCY 2 cut(s) 1114, 1443
MhlI GDGCHC 2 cut(s) 88, 998
MlyI GAGTC 4 cut(s) 750, 889, 1238, 2023
MmeI TCCRAC 1 cut(s) 1645
Mph1103I ATGCAT 1 cut(s) 110
MroXI GAANNNNTTC 3 cut(s) 683, 849, 1858
MseI TTAA 5 cut(s) 141, 369, 465, 809, 1700
MslI CAYNNNNRTG 1 cut(s) 1206
MspI CCGG 1 cut(s) 320
MspR9I CCNGG 2 cut(s) 90, 1947
MunI CAATTG 2 cut(s) 939, 1327
Mva1269I GAATGC 1 cut(s) 951
MvaI CCWGG 2 cut(s) 90, 1947
MvnI CGCG 2 cut(s) 126, 1518
MwoI GCNNNNNNNGC 1 cut(s) 83
NdeI CATATG 2 cut(s) 280, 1207
NdeII GATC 7 cut(s) 157, 322, 739, 1114, 1443, 1609, 1753
NlaIII CATG 7 cut(s) 108, 222, 307, 496, 1434, 1525, 2028
NlaIV GGNNCC 5 cut(s) 7, 1069, 1293, 1341, 1929
NmuCI GTSAC 7 cut(s) 151, 200, 1260, 1387, 1809, 1914, 2020
NsiI ATGCAT 1 cut(s) 110
NspI RCATGY 1 cut(s) 2028
PctI GAATGC 1 cut(s) 951
PdmI GAANNNNTTC 3 cut(s) 683, 849, 1858
PfoI TCCNGGA 1 cut(s) 88
PkrI GCNGC 1 cut(s) 980
PleI GAGTC 4 cut(s) 750, 888, 1238, 2022
PpsI GAGTC 4 cut(s) 750, 888, 1238, 2022
PpuMI RGGWCCY 1 cut(s) 1340
PshAI GACNNNNGTC 1 cut(s) 1329
PshBI ATTAAT 1 cut(s) 369
PsiI TTATAA 2 cut(s) 342, 1836
Psp124BI GAGCTC 1 cut(s) 88
Psp5II RGGWCCY 1 cut(s) 1340
Psp6I CCWGG 2 cut(s) 88, 1945
PspGI CCWGG 2 cut(s) 88, 1945
PspN4I GGNNCC 5 cut(s) 7, 1069, 1293, 1341, 1929
PspPI GGNCC 6 cut(s) 253, 317, 692, 1042, 1068, 1340
PspPPI RGGWCCY 1 cut(s) 1340
PstI CTGCAG 1 cut(s) 963
PstNI CAGNNNCTG 1 cut(s) 2017
PsuI RGATCY 2 cut(s) 1114, 1443
RsaI GTAC 7 cut(s) 7, 232, 751, 874, 965, 1214, 1402
RsaNI GTAC 7 cut(s) 6, 231, 750, 873, 964, 1213, 1401
RseI CAYNNNNRTG 1 cut(s) 1206
SacI GAGCTC 1 cut(s) 88
SaqAI TTAA 5 cut(s) 141, 369, 465, 809, 1700
SatI GCNGC 1 cut(s) 979
Sau3AI GATC 7 cut(s) 157, 322, 739, 1114, 1443, 1609, 1753
Sau96I GGNCC 6 cut(s) 253, 317, 692, 1042, 1068, 1340
ScaI AGTACT 2 cut(s) 751, 1402
SchI GAGTC 4 cut(s) 750, 889, 1238, 2023
ScrFI CCNGG 2 cut(s) 90, 1947
SduI GDGCHC 2 cut(s) 88, 998
SfaNI GCATC 1 cut(s) 1141
SfcI CTRYAG 1 cut(s) 959
SinI GGWCC 6 cut(s) 253, 317, 692, 1042, 1068, 1340
SmiMI CAYNNNNRTG 1 cut(s) 1206
SmlI CTYRAG 1 cut(s) 719
SmoI CTYRAG 1 cut(s) 719
SpeI ACTAGT 1 cut(s) 1397
SsiI CCGC 2 cut(s) 978, 1923
SspI AATATT 1 cut(s) 1463
SspMI CTAG 7 cut(s) 407, 630, 896, 1112, 1344, 1398, 2029
SstI GAGCTC 1 cut(s) 88
StyD4I CCNGG 2 cut(s) 88, 1945
TaaI ACNGT 5 cut(s) 71, 348, 1546, 1815, 1920
TaiI ACGT 2 cut(s) 153, 1811
TaqI TCGA 6 cut(s) 746, 766, 1247, 1569, 1619, 1688
TaqII GACCGA 1 cut(s) 1975
TatI WGTACW 3 cut(s) 749, 872, 1400
TauI GCSGC 1 cut(s) 981
Tru1I TTAA 5 cut(s) 141, 369, 465, 809, 1700
Tru9I TTAA 5 cut(s) 141, 369, 465, 809, 1700
TscAI CASTG 6 cut(s) 23, 74, 160, 209, 1818, 1923
TseFI GTSAC 7 cut(s) 151, 200, 1260, 1387, 1809, 1914, 2020
Tsp45I GTSAC 7 cut(s) 151, 200, 1260, 1387, 1809, 1914, 2020
TspDTI ATGAA 7 cut(s) 36, 676, 720, 1076, 1150, 1881, 2001
TspGWI ACGGA 1 cut(s) 1902
TspRI CASTG 6 cut(s) 23, 74, 160, 209, 1818, 1923
VpaK11BI GGWCC 6 cut(s) 253, 317, 692, 1042, 1068, 1340
VspI ATTAAT 1 cut(s) 369
XapI RAATTY 7 cut(s) 441, 662, 707, 768, 954, 1578, 1854
XceI RCATGY 1 cut(s) 2028
XcmI CCANNNNNNNNNTGG 1 cut(s) 1591
XmnI GAANNNNTTC 3 cut(s) 683, 849, 1858
XspI CTAG 7 cut(s) 407, 630, 896, 1112, 1344, 1398, 2029
ZraI GACGTC 2 cut(s) 151, 1809
ZrmI AGTACT 2 cut(s) 751, 1402
Zsp2I ATGCAT 1 cut(s) 110
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.