Rw5G014110

LRR receptor-like serine threonine-protein kinase

Basic Information

Type: gene
Biological Identity
rosa_wichuraiana
Chr5
Physical Location & Seq
Forward (+)
16814606 .. 16817425
2820 bp
Loading structure...
UTR
Exon/CDS
Intron
Rw5G014110.1

Sequence Viewer

Length: 2820 bp
ATGGTTAACCTGAACCCTATCTCTCACCTCATTCATCACCTTTTGCTCTTGCTATTTTTAGCTTCTTCAGGTTTGGGGCATGGAGTTCCAGGTTCATGCTTGGAGGAAGAGAGAGAAGCTCTTCTCAGCTTCAAACATGATCTTGCCGATCGCTCTGGCAGGCTTTCTTCTTGGGTGGGTCATGCATGCTGTCAATGGCAAGGGATTTCATGCAACAACCAAACTAGTCATGTTGAAAAGATGGACCTTCGAAATACATATCGAGATACCTACCATGGGGTTTGGAACTACACCAAGTATAACCAGTCCTGTTTAGTGGGTAAGATAAATCCTTCTTTGCTTCGCTTGAAACATTTATCTTACTTAGATCTAAGTCAGAACGATTTTCAAGGGGTTCACATCCCCAAGTTCATCGGGCAGCTTAAGAGTTTGAGGTATCTCAATCTCTCAAAGTCCTACTTTGCTGGAGAGATTCCCTCTTCCCTTGGTAACCTCTCAAACTTGAACTATCTTGACCTCAAATTTGGTTATTCCAGTGATGTTTATTCCAAAAACTTGAATTGGCTTTCTCATCTCTCTTCCCTAAAGTACCTCAATCTTGGAGGTGTGAACCTTAGCAGCACAGGAGTAAGTTGGCTACATGATGTCAACATGCTTCCTTCACTCTTAGAGTTGCATTTGTCTTATTGCCAAATTGATGAAAACCAGCTTCCACTCTCCCTACCCACAATTAACTTCACATCACTTTTGGTCCTTGATATGTCTGTCAATGTTATTAATTCTTCATTCCCCACATGGCTTTTAAATCTTACTCGCCTCAAATCCCTCGAACACCTAGACTTATCTGATATGTATCTCCAAGGTCAAATTCCTCAAGTTATTGGACATCTGTGCAAGCTAAAGATGTTAAATCTTCAGTACAACCAATTTAGCGGAGATCTTCAAGAGATTTTGAGTGGTTTCTCAAATTGTCGAGATAATGGGGGGATGGTAAGTGAATTGCAGCTTCTTGACCTCAGTTTCAACTCTTTTTCTGGATCATTTCCAGAATCTTTTCGACACTTATCATCCTTGGAAACACTGGACCTCTCTTGTAATCGTATGAACGGTTCCATTATTCCTCAAGGTTTGGGACAACTCTCTCAGCTAGTCGACCTAGATCTGTCTTGGAATTCATGGAAAGGAATTCTAACGGAAGCGCATTTCATGAACCTCACGAGATTGGAGACATTTCGAATAGACACAGACAGACCTGCTTTCTCATCATCCCTCATTTTCAATGTGACTGATGACTGGGTTCCCCCATTCAACCTCCGCGAAGTTTACATTCAAAACTGCAGAGTGGGTCCTGCGTTTCCGGTATGGCTTCGATCTCAAACTCAACTAGTTGATGTCCTGCTTGATAATACTGGAATTTCTGATCGAATTCCTGAGGAATGGCTCTTGAAGATATCTTCACAGCTTAAATCCTTGCGTTTACCTAACAATGACATTGGTGGAAAACTTCCCTTCCAATTCAAGTTTCCTAAAATAACTGTCATGGATTTGAGTCATAATCAATTTGAGGGCACACTCCAGCAGCTTTTCCCCACTAATGCCCCCCTGTTAAAATACTTGTATCTTTCTGATAATCATTTGAAAGGAACTATTCCACCTTCAATTTGCCAATTGCAACATATAAGAATTCTCTCTCTAAGAAACAATCGGTTTTCTGGAGAGTTCCCTCAAGAATGGAGTCTGTGGAGCGAAATAGATGTCGTGGATGTCTCAAACAACAATCTCTCTGGTAATATTCCCAGTTCAATTGGCATCCCAAGTTCTCTTACAGTTTTGAAGATGAACAACAATCATTTTAGAGGAGAAATCCCTTCTCTCTTGCAAAATTGCTCTGCTTTGATTGATATTGATCTGAGTGGCAACAAACTCACTGGAATCCTACCTATATGGATAGGGTCAAAGCTATCTGAATTGCAGATTCTACGATTGAGATTCAACTTTTTAAGCGGAAATATTCCCCAACAGTTGTGCAATCTTCAACACCTTCAGATCTTAGACCTCGGCCATAACAACATCTCAGGGACTATTCCCACGTGTTTGAGTAATTTGACTGTTCTACGCACCGATAATTCCTCTTGGGTAATCTATAGTGATTATGACGAGTTAACAACAGTTATCATGAAAGGAAGAGAACTTGAATACAGCCTCAATCATGCATTAATTTTAGTAATGAGCATTGATTTTTCGTCTAATCATTTAGAAGGTGAAATCCCTGAAGATATGAGCTCTCTCGTTGGATTGATTTCATTGAACTTGTCGAGGAACCATTTATTTGGAAAGATACCATGGAAGTTCAGCAACTTAAGCAAGTTGGAAACGCTTGATCTCTCACACAACCACCTTTCAGGAGAGATTCCCCAAAGCTTTTCTTCTTTGACCTCATTGTCTCACTTTAACTTGTCTTATAATAACCTCTCTGGAAGAATTCCTTCAGGTTTCCAACTTCAAACTCTGGATAATTCATCATATGTGGAGAATCCATCACTATGTGGTTTTCCTCTTTCAACCAAGTGCCAGGGAGATGACACCCAAACAAAGCAAACTTTTTCAGGAGGAGATGGTGAAGATGAAGATGATAACGGAAAGCTTGGTTTCTATATCAGCATGGTCCTTGGGTTTGTCATAGGTTTCTGGGGTGTTTGTGGCACGTTACTCATAAAGAAGTCATGGAGGTATGCCTATTTTAAGTTCTTTGGCAACATCAAAGACAAAATAGCACTGGCAATTGCTTTAAAAGTAGCTTGTTTGCAGAGAAGATTCTGA

Protein Analysis

939

Amino Acids

105.71

Weight (kDa)

6.13

Isoelectric Point (pI)

38.46

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
LRRNT_2 PF08263 35 - 72 1.8e-10 Leucine rich repeat N-terminal domain
LRR_14 PF23598 110 - 174 4.5e-07 Leucine-rich repeat region
LRR_14 PF23598 244 - 458 5.6e-14 Leucine-rich repeat region
LRR_8 PF13855 333 - 391 8.3e-10 Leucine rich repeat
LRR_8 PF13855 509 - 570 3.8e-06 Leucine rich repeat
LRR_8 PF13855 784 - 824 3.4e-08 Leucine rich repeat
LRR_4 PF12799 789 - 828 5.6e-06 Leucine Rich repeats (2 copies)
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready

Orthologous Genes (Group: OG0000048)

Species Orthologous Gene IDs
arabidopsis_thaliana AT2G34930
fragaria_vesca FvH4_3g12670 FvH4_3g12672 FvH4_3g12740 FvH4_3g12742 FvH4_3g12770 FvH4_3g12770 FvH4_3g12860 FvH4_3g12890 FvH4_3g13431 FvH4_3g13433 FvH4_3g13435 FvH4_3g13470 FvH4_3g13470 FvH4_3g13480 FvH4_3g13562 FvH4_3g13580 FvH4_3g13600 FvH4_3g13600 FvH4_3g13600 FvH4_3g13600 FvH4_3g13600 FvH4_3g13600 FvH4_3g13610 FvH4_3g13620 FvH4_3g13620 FvH4_3g23240 FvH4_3g32910 FvH4_3g35070 FvH4_3g45520 FvH4_5g08430 FvH4_5g08450 FvH4_6g53230 FvH4_6g53300
malus_domestica MD05G1217600.v1.1 MD05G1217700.v1.1 MD05G1224700.v1.1 MD05G1225100.v1.1 MD05G1225300.v1.1 MD05G1225400.v1.1 MD05G1235900.v1.1 MD05G1236100.v1.1 MD05G1236300.v1.1 MD05G1237200.v1.1 MD05G1241600.v1.1 MD05G1245700.v1.1 MD05G1245800.v1.1 MD05G1245900.v1.1 MD05G1246000.v1.1 MD05G1246100.v1.1 MD05G1246300.v1.1 MD05G1246400.v1.1 MD05G1246500.v1.1 MD05G1248100.v1.1 MD05G1248200.v1.1 MD05G1264300.v1.1 MD05G1275900.v1.1 MD07G1051400.v1.1 MD09G1012600.v1.1 MD09G1012700.v1.1 MD09G1012800.v1.1 MD10G1221400.v1.1 MD10G1221500.v1.1 MD10G1221600.v1.1 MD10G1221900.v1.1 MD10G1222200.v1.1 MD10G1222400.v1.1 MD10G1222500.v1.1 MD10G1222900.v1.1 MD10G1223000.v1.1 MD10G1223100.v1.1 MD10G1223500.v1.1 MD10G1228000.v1.1 MD12G1019600.v1.1 MD12G1020000.v1.1 MD12G1020100.v1.1 MD17G1013200.v1.1 MD17G1013300.v1.1 MD17G1013400.v1.1
prunus_persica Prupe.1G060500_v2.0.a1 Prupe.1G100100_v2.0.a1 Prupe.3G124000_v2.0.a1 Prupe.3G304400_v2.0.a1 Prupe.4G116800_v2.0.a1 Prupe.4G116900_v2.0.a1 Prupe.4G117000_v2.0.a1 Prupe.4G121800_v2.0.a1 Prupe.4G121900_v2.0.a1 Prupe.4G122000_v2.0.a1 Prupe.4G122100_v2.0.a1 Prupe.4G122200_v2.0.a1 Prupe.4G122300_v2.0.a1 Prupe.4G122500_v2.0.a1 Prupe.4G122600_v2.0.a1 Prupe.4G122800_v2.0.a1 Prupe.4G122900_v2.0.a1 Prupe.4G123000_v2.0.a1 Prupe.4G123100_v2.0.a1 Prupe.4G123200_v2.0.a1 Prupe.4G131500_v2.0.a1 Prupe.4G131600_v2.0.a1 Prupe.7G032500_v2.0.a1 Prupe.7G032900_v2.0.a1 Prupe.7G033000_v2.0.a1 Prupe.7G033100_v2.0.a1 Prupe.7G033300_v2.0.a1 Prupe.7G033600_v2.0.a1 Prupe.7G034600_v2.0.a1 Prupe.7G040200_v2.0.a1 Prupe.7G059200_v2.0.a1
pyrus_communis pycom05g20580 pycom05g20590 pycom05g20760 pycom05g20800 pycom05g21280 pycom05g21290 pycom05g21820 pycom05g21830 pycom05g22180 pycom05g22190 pycom05g22210 pycom05g22450 pycom05g22460 pycom05g22470 pycom05g22480 pycom05g22490 pycom05g23770 pycom05g23780 pycom05g24050 pycom05g24060 pycom07g03910 pycom10g18700 pycom10g18720 pycom10g18730 pycom10g18740 pycom10g19150 pycom111g01060 pycom12g01660 pycom12g01690 pycom12g01720 pycom12g01740 pycom12g01750 pycom12g01770 pycom12g01810 pycom12g01820 pycom12g01830 pycom12g01840 pycom12g01870 pycom12g01900 pycom17g01060 pycom17g01070
rosa_chinensis RchiOBHm_Chr1g0315041 RchiOBHm_Chr1g0315051 RchiOBHm_Chr1g0315071 RchiOBHm_Chr1g0315161 RchiOBHm_Chr1g0315211 RchiOBHm_Chr1g0315251 RchiOBHm_Chr1g0315321 RchiOBHm_Chr1g0315391 RchiOBHm_Chr1g0315451 RchiOBHm_Chr1g0315481 RchiOBHm_Chr1g0315551 RchiOBHm_Chr1g0315601 RchiOBHm_Chr1g0315621 RchiOBHm_Chr1g0359221 RchiOBHm_Chr2g0142981 RchiOBHm_Chr2g0143001 RchiOBHm_Chr2g0143061 RchiOBHm_Chr2g0143091 RchiOBHm_Chr2g0175321 RchiOBHm_Chr2g0175341 RchiOBHm_Chr2g0175361 RchiOBHm_Chr2g0175371 RchiOBHm_Chr3g0470491 RchiOBHm_Chr3g0480881 RchiOBHm_Chr3g0485511 RchiOBHm_Chr5g0020741 RchiOBHm_Chr5g0020901 RchiOBHm_Chr5g0020931 RchiOBHm_Chr5g0020941 RchiOBHm_Chr5g0020961 RchiOBHm_Chr5g0020971 RchiOBHm_Chr5g0021451 RchiOBHm_Chr5g0021531 RchiOBHm_Chr5g0021831 RchiOBHm_Chr5g0021841 RchiOBHm_Chr5g0021931 RchiOBHm_Chr5g0021941 RchiOBHm_Chr5g0021981 RchiOBHm_Chr5g0021991 RchiOBHm_Chr5g0022011 RchiOBHm_Chr5g0022181 RchiOBHm_Chr5g0022191 RchiOBHm_Chr5g0022211 RchiOBHm_Chr5g0022221 RchiOBHm_Chr5g0022231 RchiOBHm_Chr5g0022291 RchiOBHm_Chr5g0022301 RchiOBHm_Chr5g0022331 RchiOBHm_Chr5g0022361 RchiOBHm_Chr5g0022371 RchiOBHm_Chr5g0022381 RchiOBHm_Chr5g0022401 RchiOBHm_Chr5g0022431 RchiOBHm_Chr5g0022451 RchiOBHm_Chr5g0022541 RchiOBHm_Chr5g0022591 RchiOBHm_Chr5g0022601 RchiOBHm_Chr5g0022701 RchiOBHm_Chr5g0022741 RchiOBHm_Chr5g0022791 RchiOBHm_Chr5g0022811 RchiOBHm_Chr5g0022851 RchiOBHm_Chr5g0029441 RchiOBHm_Chr5g0041631 RchiOBHm_Chr5g0069391 RchiOBHm_Chr6g0273811 RchiOBHm_Chr6g0273831 RchiOBHm_Chr6g0275331 RchiOBHm_Chr7g0219061
rosa_laevigata RLG00000002463 RLG00000020007 RLG00000020008 RLG00000022320 RLG00000022321 RLG00000023446 RLG00000030742 RLG00000030743 RLG00000030747 RLG00000032557 RLG00000032564 RLG00000032571 RLG00000032573 RLG00000032574 RLG00000032612 RLG00000032633 RLG00000032636 RLG00000032638 RLG00000032650 RLG00000032651 RLG00000032652 RLG00000032653 RLG00000032655 RLG00000032673 RLG00000032678 RLG00000032769 RLG00000032857 RLG00000033168 RLG00000033465 RLG00000034086 RLG00000034222 RLG00000035290
rosa_multiflora Rmu_co8143358.1_g000001 Rmu_co8518791.1_g000001 Rmu_sc0000178.1_g000008 Rmu_sc0000178.1_g000014 Rmu_sc0000401.1_g000005 Rmu_sc0000401.1_g000013 Rmu_sc0000401.1_g000017 Rmu_sc0000401.1_g000018 Rmu_sc0000401.1_g000024 Rmu_sc0000401.1_g000025 Rmu_sc0000576.1_g000020 Rmu_sc0001585.1_g000003 Rmu_sc0001585.1_g000005 Rmu_sc0001585.1_g000008 Rmu_sc0001784.1_g000006 Rmu_sc0001784.1_g000011 Rmu_sc0001784.1_g000022 Rmu_sc0001784.1_g000028 Rmu_sc0002052.1_g000004 Rmu_sc0002052.1_g000011 Rmu_sc0002277.1_g000003 Rmu_sc0002277.1_g000006 Rmu_sc0002277.1_g000024 Rmu_sc0002658.1_g000012 Rmu_sc0003512.1_g000004 Rmu_sc0003512.1_g000007 Rmu_sc0004180.1_g000016 Rmu_sc0004180.1_g000029 Rmu_sc0004180.1_g000034 Rmu_sc0005639.1_g000008 Rmu_sc0005639.1_g000023 Rmu_sc0006070.1_g000016 Rmu_sc0006070.1_g000017 Rmu_sc0006966.1_g000021 Rmu_sc0006966.1_g000023 Rmu_sc0007239.1_g000003 Rmu_sc0008460.1_g000010 Rmu_sc0009984.1_g000008 Rmu_sc0010181.1_g000005 Rmu_sc0010181.1_g000010 Rmu_sc0010503.1_g000006 Rmu_sc0011646.1_g000003 Rmu_sc0012984.1_g000011 Rmu_sc0016972.1_g000005 Rmu_sc0016972.1_g000008 Rmu_sc0023070.1_g000003 Rmu_sc0025660.1_g000001 Rmu_ssc0000322.1_g000019
rosa_roxburghii Rroxscaffold_1G00038860 Rroxscaffold_1G00053490 Rroxscaffold_1G00053500 Rroxscaffold_1G00054230 Rroxscaffold_1G00056460 Rroxscaffold_1G00056470 Rroxscaffold_1G00056480 Rroxscaffold_1G00056500 Rroxscaffold_1G00056510 Rroxscaffold_1G00056620 Rroxscaffold_1G00056690 Rroxscaffold_1G00056710 Rroxscaffold_1G00056720 Rroxscaffold_1G00056730 Rroxscaffold_1G00056740 Rroxscaffold_1G00056750 Rroxscaffold_1G00056760 Rroxscaffold_1G00056870 Rroxscaffold_1G00056900 Rroxscaffold_1G00057120 Rroxscaffold_1G00057560 Rroxscaffold_2G00077430 Rroxscaffold_2G00102160 Rroxscaffold_3G00231420 Rroxscaffold_3G00231430 Rroxscaffold_4G00297230 Rroxscaffold_4G00331570 Rroxscaffold_6G00396700 Rroxscaffold_6G00400940 Rroxscaffold_7G00192740
rosa_rugosa Rorug01G0004400 Rorug01G0004500 Rorug02G0377600 Rorug02G0378000 Rorug02G0582800 Rorug02G0583400 Rorug03G0187000 Rorug03G0218800 Rorug04G0081200 Rorug05G0062700 Rorug05G0062700 Rorug05G0063100 Rorug05G0063200 Rorug05G0063200 Rorug05G0063200 Rorug05G0067000 Rorug05G0069700 Rorug05G0069900 Rorug05G0070000 Rorug05G0070100 Rorug05G0070300 Rorug05G0070400 Rorug05G0070600 Rorug05G0070600 Rorug05G0072300 Rorug05G0072400 Rorug05G0072500 Rorug05G0072500 Rorug05G0072600.1 Rorug05G0072700 Rorug05G0072800 Rorug05G0072800 Rorug05G0072900 Rorug05G0073000 Rorug05G0073000 Rorug05G0073400 Rorug05G0073400 Rorug05G0073400 Rorug05G0074800 Rorug05G0075000 Rorug05G0114300 Rorug05G0194200 Rorug06G0097800
rosa_samantha Rh2AG401400 Rh2CG387600 Rh2CG417000 Rh2CG637400 Rh5CG169600 Rh5CG172100 Rh5CG175200 Rh5CG317100 Rh6DG187900
rosa_wichuraiana Rw1G000750 Rw1G000790 Rw1G000820 Rw1G000860 Rw1G000880 Rw1G000910 Rw2G035180 Rw2G035200 Rw2G035240 Rw2G054370 Rw2G054380 Rw5G013570 Rw5G013580 Rw5G013590 Rw5G013910 Rw5G013980 Rw5G014110 Rw5G014120 Rw5G014280 Rw5G014310 Rw5G014400 Rw5G014420 Rw5G014440 Rw5G014460 Rw5G014480 Rw5G014500 Rw5G014520 Rw5G014530 Rw5G042390

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 1 cut(s) 2463
AasI GACNNNNNNGTC 1 cut(s) 2440
Acc36I ACCTGC 1 cut(s) 1261
AccI GTMKAC 1 cut(s) 1152
AccII CGCG 1 cut(s) 1317
AciI CCGC 3 cut(s) 933, 1315, 2004
AclWI GGATC 1 cut(s) 1045
AcoI YGGCCR 1 cut(s) 2059
AcsI RAATTY 8 cut(s) 521, 867, 1171, 1185, 1413, 1425, 1683, 2481
AcuI CTGAAG 5 cut(s) 51, 899, 2027, 2292, 2472
AcvI CACGTG 1 cut(s) 2091
AdeI CACNNNGTG 1 cut(s) 2546
AfaI GTAC 2 cut(s) 590, 920
AfiI CCNNNNNNNGG 1 cut(s) 276
AflII CTTAAG 2 cut(s) 422, 2359
AflIII ACRYGT 1 cut(s) 2090
AhlI ACTAGT 2 cut(s) 224, 1384
AjnI CCWGG 2 cut(s) 88, 2571
AjuI GAANNNNNNNTTGG 4 cut(s) 852, 884, 1506, 1538
Alw21I GWGCWC 1 cut(s) 2285
Alw26I GTCTC 3 cut(s) 1220, 1771, 2448
AlwI GGATC 1 cut(s) 1045
AoxI GGCC 1 cut(s) 2059
ApeKI GCWGC 4 cut(s) 418, 618, 1003, 1579
ApoI RAATTY 8 cut(s) 521, 867, 1171, 1185, 1413, 1425, 1683, 2481
ArsI GACNNNNNNTTYG 4 cut(s) 506, 538, 1740, 1772
AseI ATTAAT 2 cut(s) 777, 2216
Asp700I GAANNNNTTC 3 cut(s) 120, 1053, 2485
AspLEI GCGC 1 cut(s) 1201
AspS9I GGNCC 5 cut(s) 244, 751, 1084, 1346, 2665
AsuHPI GGTGA 4 cut(s) 17, 29, 2273, 2630
AsuII TTCGAA 2 cut(s) 250, 1234
AvaII GGWCC 5 cut(s) 244, 751, 1084, 1346, 2665
AxyI CCTNAGG 1 cut(s) 1431
BaeGI GKGCMC 1 cut(s) 1571
BanII GRGCYC 1 cut(s) 2285
BauI CACGAG 1 cut(s) 1216
BbrPI CACGTG 1 cut(s) 2091
Bbv12I GWGCWC 1 cut(s) 2285
BbvI GCAGC 4 cut(s) 430, 630, 1015, 1591
BccI CCATC 4 cut(s) 235, 982, 2545, 2609
BciT130I CCWGG 2 cut(s) 90, 2573
BcoDI GTCTC 3 cut(s) 1220, 1771, 2448
BcuI ACTAGT 2 cut(s) 224, 1384
BfaI CTAG 5 cut(s) 225, 836, 1148, 1157, 1385
BfmI CTRYAG 2 cut(s) 1336, 2143
BfrI CTTAAG 2 cut(s) 422, 2359
BfuAI ACCTGC 1 cut(s) 1261
BglII AGATCT 4 cut(s) 367, 937, 1159, 2046
BisI GCNGC 4 cut(s) 419, 619, 1004, 1580
BlsI GCNGC 4 cut(s) 420, 620, 1005, 1581
Bme1390I CCNGG 2 cut(s) 90, 2573
Bme18I GGWCC 5 cut(s) 244, 751, 1084, 1346, 2665
BmgT120I GGNCC 5 cut(s) 244, 751, 1084, 1346, 2665
BmiI GGNNCC 4 cut(s) 1111, 1299, 1347, 2321
BmrFI CCNGG 2 cut(s) 90, 2573
BmrI ACTGGG 2 cut(s) 1303, 1791
BmsI GCATC 1 cut(s) 1818
BmuI ACTGGG 2 cut(s) 1303, 1791
BplI GAGNNNNNCTC 4 cut(s) 103, 135, 461, 493
BpmI CTGGAG 3 cut(s) 486, 1559, 1734
Bpu10I CCTNAGC 1 cut(s) 614
Bpu14I TTCGAA 2 cut(s) 250, 1234
BpuEI CTTGAG 3 cut(s) 858, 1107, 1710
BsaAI YACGTR 1 cut(s) 2091
BsaBI GATNNNNATC 2 cut(s) 852, 1905
BsaJI CCNNGG 8 cut(s) 274, 484, 859, 1071, 2056, 2342, 2572, 2668
BsaWI WCCGGW 1 cut(s) 1357
Bsc4I CCNNNNNNNGG 1 cut(s) 276
Bse1I ACTGG 8 cut(s) 304, 534, 1086, 1298, 1414, 1797, 1933, 2781
Bse21I CCTNAGG 1 cut(s) 1431
Bse8I GATNNNNATC 2 cut(s) 852, 1905
BseBI CCWGG 2 cut(s) 90, 2573
BseDI CCNNGG 8 cut(s) 274, 484, 859, 1071, 2056, 2342, 2572, 2668
BseGI GGATG 6 cut(s) 399, 993, 1067, 1265, 1768, 1809
BseJI GATNNNNATC 2 cut(s) 852, 1905
BseLI CCNNNNNNNGG 1 cut(s) 276
BseMII CTCAG 6 cut(s) 139, 1030, 1157, 1422, 1901, 2088
BseNI ACTGG 8 cut(s) 304, 534, 1086, 1298, 1414, 1797, 1933, 2781
BseRI GAGGAG 2 cut(s) 1872, 2625
BseSI GKGCMC 1 cut(s) 1571
BseXI GCAGC 4 cut(s) 430, 630, 1015, 1591
Bsh1236I CGCG 1 cut(s) 1317
Bsh1285I CGRYCG 1 cut(s) 151
BshFI GGCC 1 cut(s) 2061
BsiEI CGRYCG 1 cut(s) 151
BsiHKAI GWGCWC 1 cut(s) 2285
BsiSI CCGG 1 cut(s) 1358
BslFI GGGAC 2 cut(s) 1146, 2092
BslI CCNNNNNNNGG 1 cut(s) 276
BsmAI GTCTC 3 cut(s) 1220, 1771, 2448
BsmFI GGGAC 2 cut(s) 1146, 2092
BsnI GGCC 1 cut(s) 2061
Bsp119I TTCGAA 2 cut(s) 250, 1234
Bsp1286I GDGCHC 2 cut(s) 1571, 2285
Bsp19I CCATGG 2 cut(s) 274, 2342
BspACI CCGC 3 cut(s) 933, 1315, 2004
BspANI GGCC 1 cut(s) 2061
BspCNI CTCAG 6 cut(s) 138, 1029, 1156, 1423, 1902, 2087
BspFNI CGCG 1 cut(s) 1317
BspHI TCATGA 2 cut(s) 1206, 2175
BspLI GGNNCC 4 cut(s) 1111, 1299, 1347, 2321
BspMAI CTGCAG 1 cut(s) 1340
BspMI ACCTGC 1 cut(s) 1261
BspPI GGATC 1 cut(s) 1045
BspQI GCTCTTC 1 cut(s) 126
BspT104I TTCGAA 2 cut(s) 250, 1234
BspTI CTTAAG 2 cut(s) 422, 2359
BsrI ACTGG 8 cut(s) 304, 534, 1086, 1298, 1414, 1797, 1933, 2781
BssECI CCNNGG 8 cut(s) 274, 484, 859, 1071, 2056, 2342, 2572, 2668
BssSI CACGAG 1 cut(s) 1216
BssT1I CCWWGG 6 cut(s) 274, 484, 859, 1071, 2342, 2668
Bst2BI CACGAG 1 cut(s) 1216
Bst2UI CCWGG 2 cut(s) 90, 2573
Bst4CI ACNGT 6 cut(s) 1109, 1537, 1828, 2022, 2110, 2170
Bst6I CTCTTC 5 cut(s) 102, 126, 484, 583, 2179
BstAFI CTTAAG 2 cut(s) 422, 2359
BstBAI YACGTR 1 cut(s) 2091
BstBI TTCGAA 2 cut(s) 250, 1234
BstC8I GCNNGC 3 cut(s) 161, 187, 896
BstDSI CCRYGG 2 cut(s) 274, 2342
BstEII GGTNACC 1 cut(s) 488
BstF5I GGATG 6 cut(s) 399, 993, 1067, 1265, 1768, 1809
BstFNI CGCG 1 cut(s) 1317
BstHHI GCGC 1 cut(s) 1201
BstMAI GTCTC 3 cut(s) 1220, 1771, 2448
BstMCI CGRYCG 1 cut(s) 151
BstMWI GCNNNNNNNGC 1 cut(s) 2361
BstNI CCWGG 2 cut(s) 90, 2573
BstNSI RCATGY 2 cut(s) 189, 655
BstPI GGTNACC 1 cut(s) 488
BstSCI CCNGG 2 cut(s) 88, 2571
BstSFI CTRYAG 2 cut(s) 1336, 2143
BstSLI GKGCMC 1 cut(s) 1571
BstUI CGCG 1 cut(s) 1317
BstV1I GCAGC 4 cut(s) 430, 630, 1015, 1591
BstX2I RGATCY 4 cut(s) 367, 937, 1159, 2046
BstXI CCANNNNNNTGG 1 cut(s) 2330
BstYI RGATCY 4 cut(s) 367, 937, 1159, 2046
Bsu36I CCTNAGG 1 cut(s) 1431
BsuRI GGCC 1 cut(s) 2061
BtgI CCRYGG 2 cut(s) 274, 2342
BtsCI GGATG 6 cut(s) 399, 993, 1067, 1265, 1768, 1809
BtsIMutI CAGTG 4 cut(s) 541, 1079, 1926, 2774
BveI ACCTGC 1 cut(s) 1261
Cac8I GCNNGC 3 cut(s) 161, 187, 896
CciI TCATGA 2 cut(s) 1206, 2175
CfoI GCGC 1 cut(s) 1201
Cfr13I GGNCC 5 cut(s) 244, 751, 1084, 1346, 2665
Csp6I GTAC 2 cut(s) 589, 919
CviQI GTAC 2 cut(s) 589, 919
DraI TTTAAA 2 cut(s) 804, 2790
DraIII CACNNNGTG 1 cut(s) 2546
DrdI GACNNNNNNGTC 1 cut(s) 2440
DseDI GACNNNNNNGTC 1 cut(s) 2440
EaeI YGGCCR 1 cut(s) 2059
Eam1104I CTCTTC 5 cut(s) 102, 126, 484, 583, 2179
EarI CTCTTC 5 cut(s) 102, 126, 484, 583, 2179
Ecl136II GAGCTC 1 cut(s) 2283
Eco130I CCWWGG 6 cut(s) 274, 484, 859, 1071, 2342, 2668
Eco24I GRGCYC 1 cut(s) 2285
Eco32I GATATC 1 cut(s) 1452
Eco47I GGWCC 5 cut(s) 244, 751, 1084, 1346, 2665
Eco53kI GAGCTC 1 cut(s) 2283
Eco57I CTGAAG 5 cut(s) 51, 899, 2027, 2292, 2472
Eco72I CACGTG 1 cut(s) 2091
Eco81I CCTNAGG 1 cut(s) 1431
Eco91I GGTNACC 1 cut(s) 488
EcoICRI GAGCTC 1 cut(s) 2283
EcoO109I RGGNCCY 1 cut(s) 1346
EcoO65I GGTNACC 1 cut(s) 488
EcoRI GAATTC 5 cut(s) 1171, 1185, 1425, 1683, 2481
EcoRII CCWGG 2 cut(s) 88, 2571
EcoRV GATATC 1 cut(s) 1452
EcoT14I CCWWGG 6 cut(s) 274, 484, 859, 1071, 2342, 2668
EcoT22I ATGCAT 2 cut(s) 187, 2215
EcoT38I GRGCYC 1 cut(s) 2285
ErhI CCWWGG 6 cut(s) 274, 484, 859, 1071, 2342, 2668
FalI AAGNNNNNCTT 6 cut(s) 443, 475, 2410, 2442, 2470, 2502
FaqI GGGAC 2 cut(s) 1146, 2092
FauNDI CATATG 1 cut(s) 2524
FblI GTMKAC 1 cut(s) 1152
Fnu4HI GCNGC 4 cut(s) 419, 619, 1004, 1580
FokI GGATG 6 cut(s) 386, 1000, 1054, 1252, 1775, 1796
FriOI GRGCYC 1 cut(s) 2285
Fsp4HI GCNGC 4 cut(s) 419, 619, 1004, 1580
FspBI CTAG 5 cut(s) 225, 836, 1148, 1157, 1385
GlaI GCGC 1 cut(s) 1200
GluI GCNGC 4 cut(s) 419, 619, 1004, 1580
GsuI CTGGAG 3 cut(s) 486, 1559, 1734
HaeIII GGCC 1 cut(s) 2061
HapII CCGG 1 cut(s) 1358
HhaI GCGC 1 cut(s) 1201
Hin6I GCGC 1 cut(s) 1199
HinP1I GCGC 1 cut(s) 1199
HincII GTYRAC 4 cut(s) 7, 649, 1153, 2163
HindII GTYRAC 4 cut(s) 7, 649, 1153, 2163
HindIII AAGCTT 2 cut(s) 2419, 2642
HpaI GTTAAC 2 cut(s) 7, 2163
HpaII CCGG 1 cut(s) 1358
HphI GGTGA 4 cut(s) 17, 29, 2273, 2630
Hpy166II GTNNAC 8 cut(s) 7, 397, 610, 649, 1153, 1324, 1478, 2163
Hpy188I TCNGA 8 cut(s) 378, 847, 1420, 1627, 1911, 1966, 2046, 2819
Hpy8I GTNNAC 8 cut(s) 7, 397, 610, 649, 1153, 1324, 1478, 2163
HpyAV CCTTC 9 cut(s) 257, 342, 669, 1519, 1665, 1878, 2051, 2252, 2496
HpyCH4III ACNGT 6 cut(s) 1109, 1537, 1828, 2022, 2110, 2170
HpyCH4IV ACGT 2 cut(s) 2090, 2705
HpyF10VI GCNNNNNNNGC 1 cut(s) 2361
HpySE526I ACGT 2 cut(s) 2090, 2705
HspAI GCGC 1 cut(s) 1199
KspAI GTTAAC 2 cut(s) 7, 2163
LguI GCTCTTC 1 cut(s) 126
LmnI GCTCC 1 cut(s) 1743
Lsp1109I GCAGC 4 cut(s) 430, 630, 1015, 1591
LweI GCATC 1 cut(s) 1818
MaeI CTAG 5 cut(s) 225, 836, 1148, 1157, 1385
MaeII ACGT 2 cut(s) 2090, 2705
MaeIII GTNAC 3 cut(s) 488, 1282, 2706
MfeI CAATTG 3 cut(s) 1667, 1803, 2781
MflI RGATCY 4 cut(s) 367, 937, 1159, 2046
MhlI GDGCHC 2 cut(s) 1571, 2285
MlyI GAGTC 2 cut(s) 1558, 1744
MmeI TCCRAC 3 cut(s) 2272, 2349, 2521
Mph1103I ATGCAT 2 cut(s) 187, 2215
MroXI GAANNNNTTC 3 cut(s) 120, 1053, 2485
MslI CAYNNNNRTG 1 cut(s) 2542
MspCI CTTAAG 2 cut(s) 422, 2359
MspI CCGG 1 cut(s) 1358
MspR9I CCNGG 2 cut(s) 90, 2573
MunI CAATTG 3 cut(s) 1667, 1803, 2781
MvaI CCWGG 2 cut(s) 90, 2573
MvnI CGCG 1 cut(s) 1317
MwoI GCNNNNNNNGC 1 cut(s) 2361
NcoI CCATGG 2 cut(s) 274, 2342
NdeI CATATG 1 cut(s) 2524
NlaIV GGNNCC 4 cut(s) 1111, 1299, 1347, 2321
NmeAIII GCCGAG 1 cut(s) 2037
NmuCI GTSAC 1 cut(s) 1282
NsiI ATGCAT 2 cut(s) 187, 2215
NspI RCATGY 2 cut(s) 189, 655
NspV TTCGAA 2 cut(s) 250, 1234
PaeI GCATGC 1 cut(s) 189
PagI TCATGA 2 cut(s) 1206, 2175
PciSI GCTCTTC 1 cut(s) 126
PdmI GAANNNNTTC 3 cut(s) 120, 1053, 2485
PfeI GAWTC 8 cut(s) 472, 1049, 1932, 1975, 1989, 2410, 2533, 2814
PkrI GCNGC 4 cut(s) 420, 620, 1005, 1581
Ple19I CGATCG 1 cut(s) 151
PleI GAGTC 2 cut(s) 1557, 1743
PmaCI CACGTG 1 cut(s) 2091
PmlI CACGTG 1 cut(s) 2091
PpsI GAGTC 2 cut(s) 1557, 1743
Ppu21I YACGTR 1 cut(s) 2091
PpuMI RGGWCCY 1 cut(s) 1346
PshBI ATTAAT 2 cut(s) 777, 2216
PsiI TTATAA 1 cut(s) 2463
Psp124BI GAGCTC 1 cut(s) 2285
Psp5II RGGWCCY 1 cut(s) 1346
Psp6I CCWGG 2 cut(s) 88, 2571
PspCI CACGTG 1 cut(s) 2091
PspEI GGTNACC 1 cut(s) 488
PspGI CCWGG 2 cut(s) 88, 2571
PspN4I GGNNCC 4 cut(s) 1111, 1299, 1347, 2321
PspPI GGNCC 5 cut(s) 244, 751, 1084, 1346, 2665
PspPPI RGGWCCY 1 cut(s) 1346
PsrI GAACNNNNNNTAC 2 cut(s) 1093, 1125
PstI CTGCAG 1 cut(s) 1340
PsuI RGATCY 4 cut(s) 367, 937, 1159, 2046
PvuI CGATCG 1 cut(s) 151
RsaI GTAC 2 cut(s) 590, 920
RsaNI GTAC 2 cut(s) 589, 919
RseI CAYNNNNRTG 1 cut(s) 2542
SacI GAGCTC 1 cut(s) 2285
SalI GTCGAC 1 cut(s) 1151
SapI GCTCTTC 1 cut(s) 126
SatI GCNGC 4 cut(s) 419, 619, 1004, 1580
Sau96I GGNCC 5 cut(s) 244, 751, 1084, 1346, 2665
SchI GAGTC 2 cut(s) 1558, 1744
ScrFI CCNGG 2 cut(s) 90, 2573
SduI GDGCHC 2 cut(s) 1571, 2285
SfaNI GCATC 1 cut(s) 1818
SfcI CTRYAG 2 cut(s) 1336, 2143
SfuI TTCGAA 2 cut(s) 250, 1234
SinI GGWCC 5 cut(s) 244, 751, 1084, 1346, 2665
SmiMI CAYNNNNRTG 1 cut(s) 2542
SmlI CTYRAG 5 cut(s) 422, 873, 1122, 1725, 2359
SmoI CTYRAG 5 cut(s) 422, 873, 1122, 1725, 2359
SpeI ACTAGT 2 cut(s) 224, 1384
SphI GCATGC 1 cut(s) 189
SsiI CCGC 3 cut(s) 933, 1315, 2004
SspI AATATT 2 cut(s) 1792, 2011
SspMI CTAG 5 cut(s) 225, 836, 1148, 1157, 1385
SstI GAGCTC 1 cut(s) 2285
StyD4I CCNGG 2 cut(s) 88, 2571
StyI CCWWGG 6 cut(s) 274, 484, 859, 1071, 2342, 2668
TaaI ACNGT 6 cut(s) 1109, 1537, 1828, 2022, 2110, 2170
TaiI ACGT 2 cut(s) 2093, 2708
TatI WGTACW 1 cut(s) 918
TfiI GAWTC 8 cut(s) 472, 1049, 1932, 1975, 1989, 2410, 2533, 2814
TscAI CASTG 4 cut(s) 541, 1086, 1933, 2781
TseFI GTSAC 1 cut(s) 1282
TseI GCWGC 4 cut(s) 418, 618, 1003, 1579
Tsp45I GTSAC 1 cut(s) 1282
TspGWI ACGGA 2 cut(s) 1208, 2652
TspRI CASTG 4 cut(s) 541, 1086, 1933, 2781
Vha464I CTTAAG 2 cut(s) 422, 2359
VpaK11BI GGWCC 5 cut(s) 244, 751, 1084, 1346, 2665
VspI ATTAAT 2 cut(s) 777, 2216
XapI RAATTY 8 cut(s) 521, 867, 1171, 1185, 1413, 1425, 1683, 2481
XceI RCATGY 2 cut(s) 189, 655
XmiI GTMKAC 1 cut(s) 1152
XmnI GAANNNNTTC 3 cut(s) 120, 1053, 2485
XspI CTAG 5 cut(s) 225, 836, 1148, 1157, 1385
Zsp2I ATGCAT 2 cut(s) 187, 2215
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.