pycom05g21280

regulation of response to stimulus

Basic Information

Type: gene
Biological Identity
pyrus_communis
Chr5
Physical Location & Seq
Reverse (-)
23918302 .. 23921399
3098 bp
Loading structure...
UTR
Exon/CDS
Intron
pycom05g21280.1

Sequence Viewer

Length: 3033 bp
ATGGATACCCACTGTCACCTCAGCATTGCTCACTATTTCCTTCTTTTTCTTTTGACCTCTTCCTACATGCAGAGTACTACTAAACTCTGTTTCTGTTTGGCCAGTGGTGCACTTTCAAGCAGTGTGAAAACAAATCCATGCATCGACGAAGAAAGACAAGCGCTTCTCATCTTTAAACGACATCTTGTTGATGCTTCTGATAGGCTTTCCTCTTGGGTGGGTCACGATTGCTGTCAATGGAAAGGTGTTTCGTGCAACAACCGCACCGGTCATGTTGTGAAGATGGACCTCCGGAATCCATATCCCTCTTCCTATGATGATCGATCTTATGAAAAGGCTCACTTGGGAGGTAAGATAAATGCTTCTCTGTTGAGCTTGAAACATTTAAATTACCTGGACCTAAGCTTTAATGATTTTCATCTCATTCAAGTTCCTAAGTTCTTCGGGGAGCTTAAAAGTTTGCAATATCTCAATCTCTCCTCTGCGTCATTTGGAGGAGAGATTCCCCCTTCTCTTGGTAACCTGTCAAGCCTCAATTTTCTTGATCTTAGGTTCAGTTTCAACTTATCTTCCAGAAATTTGCATTGGTTGTCTCGCCTCTCTTCTCTAAAATACCTTGATCTCGGAGGCATGGATCTTAGCACCACAGGAGTCAATTGGGCGTATGCTGTTAATATGCTTCCTTCATTAGCAGAGTTACACTTATCTTATTGCCAAATTGAAAGCATTTCACTCTCACTGCGGAGCATTAACTTCACATCACTTTTTAATCTTACCAGCCTCATAACACTTGATCTATCCTTGAATCATTTCGGTGGTCCTTTCCCAAGTGAATTTGCAAACTTCAAATCTCTGGAATACCTTGATTTATCTGGTACAGGCTTAGAAGGCCAAATTCCTAAAGGCATTGGAAATTTGTGCAAGCTAAAGGTCTTAACTCTTTCTGCCAACGAATTTAATGGGGGGCTTGAAGAGTTTTGGAGAAGTTTCTCAAATTGTTCAAATATTGCATTAGAGTCACTAGATTTGTCTTCTTGTGAGCTGGGAAGCCAACTGCCGGTCTCCTTAGGAATGTTTAAAAGTTTGCAAAATCTCTACCTTGGTGGAAACTATTTGTGGGGCTCAATTCCAGATTCCATTGGAAACTTGTCATCCTTGAAAACATTGGACTTCTCTGTTAATATGATGAGCGGCTGCATTCCACAAAGTCTGGGACAACTCTCTCAGCTATTTTCCCTCGATCTGTCTTCTAATCCTTGGAAGGGCAATCTAACGGAAGCCCATTTCATAAATCTTACCCGGTTACAAGATTTTAGAGCAGGAGACATATACAACCACACGTCCCTCATTTTCGACGTGGCGGATGATTGGGTTCCTCCATTCAAGCTCCACACAATTTATATCATAAATTGTCATATAGGTCCCCGTTTTGGGATATGGCTTCAATCTCAAACTGAACTGAGGAAAATCTATCTTAAGGGTAATGGAATCTCGGATTCCTTCCCAGAGGAATGGCTGTTAAAGATATCTTCCCAACTCATCCACCTAGATTTGTCTTACAATCAATTTCGTGGAAACCTTCCATCCCATTTGAAATCTCCAAAATTGGAGTGGATTGATTTGAGTTATAATCAGTTGGAGGGCCCACTCCCACTTTGGTCGGCCACTAAGGTCACTAACTTTGATCTTGAAAGAAATTCCTTTTCCGGGCCAATTCCCTCCAATATTGACCAGATGATGCCTAATTTGAATTCTTTGTATCTTTCTACGAATCATTTGATTGGCAATATTCCTCGCTCTATCTGTAACATGCAGCAATTGCAAGAATTGTCTCTTTTTGAGAATCATTTGAATGGCACTATTCCTCCCTCTGTTTACAACATGAAGCAGTTGCAAATCTTGTCTCTAAGGAGCAATCAATTTCATGGAGAATTTCGTCATGCATGGAGTGTGGGGAGCAATATGAAGTATCTAGATGTTAGTCAAAACAATCTCTCGGGTAATATTCCCACATCATTAGGGGTATTAATTTCACTGGAAGTATTAAAGCTCAACAACAACAATTTTGATGGTGAAATTCCAAATTCCTTGCAAAATTGTTCTTTGAGGAGGATTGATCTTGGAGACAACAAGTTATTTGGCAAAATACCACAGTGGATAGGAGGATTAAATGTATCCATGTTGAATATGATACGATTACGGTCCAACAAATTTAGTGGACATATATCCCAGCAACTGTGCAATCTTCAACAACTTCATATCCTCGACCTTAGTCACAACAACATTTCAGGTACTATTCCCAAGTGTTTGGGTAATTTGGCTTCGCTGGTCAATGATCCATATACATCAGATGATACTTTTCATGCCTTTGATGAGCAAACCACATTGACACTAAAAGGAAGGGAACTTGTGTACAATAATACTCTATATCTTGTAAAGAGCATTGATCTTTCATCAAATATTTTACAAGGTGAAATCCCTGAAGAAATAAGTAGCCTCATTCTATTGGGTACCTTGAACTTGTCTAGGAATCAATTGACTGGAAAGATCCCTTCCAAGATCGGAAACTTGCATTGGCTCGAAACACTTGATCTCTCACACAACCATCTTTCAGGACAGATTCCTCAAAGCTTGTCATCTTTAACCTCACTATCCCACTTGAACTTGTCTTACAACAACTTGTCTGGAAGAATTCCTTCAGGAAACCAGCTTCAAACGCTCATTGATCCATCCATTTATATGGAAAATCCATCGTTATGCGGCTTTCCTCTCTCAACTAAGTGCCCTGGAGATGACACTTTCCCATCTAAGGATACAAAAGACATGAATGAAGGTGGAAATGATGAGTTGTGGTTCTATGTCAGCATGGTATGCATATTTTCAGTTCTTCGACAACATCAAAGACAAGGTAGCACTAGCAATTGCATTGAAAGTGGCTCGTTTTCAAAGAATGTTTTCTTATGTTTGATAGTATTATGTATATTTGTGGTTTCCTTTGTATTTGGTTTATGGGACTTGCAACTTATGTATTGA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families

Protein Analysis

1011

Amino Acids

113.04

Weight (kDa)

6.07

Isoelectric Point (pI)

40.52

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
LRRNT_2 PF08263 49 - 86 1.9e-11 Leucine rich repeat N-terminal domain
LRR_14 PF23598 122 - 267 7.5e-10 Leucine-rich repeat region
LRR_14 PF23598 338 - 485 6.3e-13 Leucine-rich repeat region
LRR_8 PF13855 361 - 419 9.2e-09 Leucine rich repeat
LRR_14 PF23598 828 - 894 3.9e-07 Leucine-rich repeat region
LRR_8 PF13855 838 - 894 4.7e-07 Leucine rich repeat
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready

Orthologous Genes (Group: OG0000048)

Species Orthologous Gene IDs
arabidopsis_thaliana AT2G34930
fragaria_vesca FvH4_3g12670 FvH4_3g12672 FvH4_3g12740 FvH4_3g12742 FvH4_3g12770 FvH4_3g12770 FvH4_3g12860 FvH4_3g12890 FvH4_3g13431 FvH4_3g13433 FvH4_3g13435 FvH4_3g13470 FvH4_3g13470 FvH4_3g13480 FvH4_3g13562 FvH4_3g13580 FvH4_3g13600 FvH4_3g13600 FvH4_3g13600 FvH4_3g13600 FvH4_3g13600 FvH4_3g13600 FvH4_3g13610 FvH4_3g13620 FvH4_3g13620 FvH4_3g23240 FvH4_3g32910 FvH4_3g35070 FvH4_3g45520 FvH4_5g08430 FvH4_5g08450 FvH4_6g53230 FvH4_6g53300
malus_domestica MD05G1217600.v1.1 MD05G1217700.v1.1 MD05G1224700.v1.1 MD05G1225100.v1.1 MD05G1225300.v1.1 MD05G1225400.v1.1 MD05G1235900.v1.1 MD05G1236100.v1.1 MD05G1236300.v1.1 MD05G1237200.v1.1 MD05G1241600.v1.1 MD05G1245700.v1.1 MD05G1245800.v1.1 MD05G1245900.v1.1 MD05G1246000.v1.1 MD05G1246100.v1.1 MD05G1246300.v1.1 MD05G1246400.v1.1 MD05G1246500.v1.1 MD05G1248100.v1.1 MD05G1248200.v1.1 MD05G1264300.v1.1 MD05G1275900.v1.1 MD07G1051400.v1.1 MD09G1012600.v1.1 MD09G1012700.v1.1 MD09G1012800.v1.1 MD10G1221400.v1.1 MD10G1221500.v1.1 MD10G1221600.v1.1 MD10G1221900.v1.1 MD10G1222200.v1.1 MD10G1222400.v1.1 MD10G1222500.v1.1 MD10G1222900.v1.1 MD10G1223000.v1.1 MD10G1223100.v1.1 MD10G1223500.v1.1 MD10G1228000.v1.1 MD12G1019600.v1.1 MD12G1020000.v1.1 MD12G1020100.v1.1 MD17G1013200.v1.1 MD17G1013300.v1.1 MD17G1013400.v1.1
prunus_persica Prupe.1G060500_v2.0.a1 Prupe.1G100100_v2.0.a1 Prupe.3G124000_v2.0.a1 Prupe.3G304400_v2.0.a1 Prupe.4G116800_v2.0.a1 Prupe.4G116900_v2.0.a1 Prupe.4G117000_v2.0.a1 Prupe.4G121800_v2.0.a1 Prupe.4G121900_v2.0.a1 Prupe.4G122000_v2.0.a1 Prupe.4G122100_v2.0.a1 Prupe.4G122200_v2.0.a1 Prupe.4G122300_v2.0.a1 Prupe.4G122500_v2.0.a1 Prupe.4G122600_v2.0.a1 Prupe.4G122800_v2.0.a1 Prupe.4G122900_v2.0.a1 Prupe.4G123000_v2.0.a1 Prupe.4G123100_v2.0.a1 Prupe.4G123200_v2.0.a1 Prupe.4G131500_v2.0.a1 Prupe.4G131600_v2.0.a1 Prupe.7G032500_v2.0.a1 Prupe.7G032900_v2.0.a1 Prupe.7G033000_v2.0.a1 Prupe.7G033100_v2.0.a1 Prupe.7G033300_v2.0.a1 Prupe.7G033600_v2.0.a1 Prupe.7G034600_v2.0.a1 Prupe.7G040200_v2.0.a1 Prupe.7G059200_v2.0.a1
pyrus_communis pycom05g20580 pycom05g20590 pycom05g20760 pycom05g20800 pycom05g21280 pycom05g21290 pycom05g21820 pycom05g21830 pycom05g22180 pycom05g22190 pycom05g22210 pycom05g22450 pycom05g22460 pycom05g22470 pycom05g22480 pycom05g22490 pycom05g23770 pycom05g23780 pycom05g24050 pycom05g24060 pycom07g03910 pycom10g18700 pycom10g18720 pycom10g18730 pycom10g18740 pycom10g19150 pycom111g01060 pycom12g01660 pycom12g01690 pycom12g01720 pycom12g01740 pycom12g01750 pycom12g01770 pycom12g01810 pycom12g01820 pycom12g01830 pycom12g01840 pycom12g01870 pycom12g01900 pycom17g01060 pycom17g01070
rosa_chinensis RchiOBHm_Chr1g0315041 RchiOBHm_Chr1g0315051 RchiOBHm_Chr1g0315071 RchiOBHm_Chr1g0315161 RchiOBHm_Chr1g0315211 RchiOBHm_Chr1g0315251 RchiOBHm_Chr1g0315321 RchiOBHm_Chr1g0315391 RchiOBHm_Chr1g0315451 RchiOBHm_Chr1g0315481 RchiOBHm_Chr1g0315551 RchiOBHm_Chr1g0315601 RchiOBHm_Chr1g0315621 RchiOBHm_Chr1g0359221 RchiOBHm_Chr2g0142981 RchiOBHm_Chr2g0143001 RchiOBHm_Chr2g0143061 RchiOBHm_Chr2g0143091 RchiOBHm_Chr2g0175321 RchiOBHm_Chr2g0175341 RchiOBHm_Chr2g0175361 RchiOBHm_Chr2g0175371 RchiOBHm_Chr3g0470491 RchiOBHm_Chr3g0480881 RchiOBHm_Chr3g0485511 RchiOBHm_Chr5g0020741 RchiOBHm_Chr5g0020901 RchiOBHm_Chr5g0020931 RchiOBHm_Chr5g0020941 RchiOBHm_Chr5g0020961 RchiOBHm_Chr5g0020971 RchiOBHm_Chr5g0021451 RchiOBHm_Chr5g0021531 RchiOBHm_Chr5g0021831 RchiOBHm_Chr5g0021841 RchiOBHm_Chr5g0021931 RchiOBHm_Chr5g0021941 RchiOBHm_Chr5g0021981 RchiOBHm_Chr5g0021991 RchiOBHm_Chr5g0022011 RchiOBHm_Chr5g0022181 RchiOBHm_Chr5g0022191 RchiOBHm_Chr5g0022211 RchiOBHm_Chr5g0022221 RchiOBHm_Chr5g0022231 RchiOBHm_Chr5g0022291 RchiOBHm_Chr5g0022301 RchiOBHm_Chr5g0022331 RchiOBHm_Chr5g0022361 RchiOBHm_Chr5g0022371 RchiOBHm_Chr5g0022381 RchiOBHm_Chr5g0022401 RchiOBHm_Chr5g0022431 RchiOBHm_Chr5g0022451 RchiOBHm_Chr5g0022541 RchiOBHm_Chr5g0022591 RchiOBHm_Chr5g0022601 RchiOBHm_Chr5g0022701 RchiOBHm_Chr5g0022741 RchiOBHm_Chr5g0022791 RchiOBHm_Chr5g0022811 RchiOBHm_Chr5g0022851 RchiOBHm_Chr5g0029441 RchiOBHm_Chr5g0041631 RchiOBHm_Chr5g0069391 RchiOBHm_Chr6g0273811 RchiOBHm_Chr6g0273831 RchiOBHm_Chr6g0275331 RchiOBHm_Chr7g0219061
rosa_laevigata RLG00000002463 RLG00000020007 RLG00000020008 RLG00000022320 RLG00000022321 RLG00000023446 RLG00000030742 RLG00000030743 RLG00000030747 RLG00000032557 RLG00000032564 RLG00000032571 RLG00000032573 RLG00000032574 RLG00000032612 RLG00000032633 RLG00000032636 RLG00000032638 RLG00000032650 RLG00000032651 RLG00000032652 RLG00000032653 RLG00000032655 RLG00000032673 RLG00000032678 RLG00000032769 RLG00000032857 RLG00000033168 RLG00000033465 RLG00000034086 RLG00000034222 RLG00000035290
rosa_multiflora Rmu_co8143358.1_g000001 Rmu_co8518791.1_g000001 Rmu_sc0000178.1_g000008 Rmu_sc0000178.1_g000014 Rmu_sc0000401.1_g000005 Rmu_sc0000401.1_g000013 Rmu_sc0000401.1_g000017 Rmu_sc0000401.1_g000018 Rmu_sc0000401.1_g000024 Rmu_sc0000401.1_g000025 Rmu_sc0000576.1_g000020 Rmu_sc0001585.1_g000003 Rmu_sc0001585.1_g000005 Rmu_sc0001585.1_g000008 Rmu_sc0001784.1_g000006 Rmu_sc0001784.1_g000011 Rmu_sc0001784.1_g000022 Rmu_sc0001784.1_g000028 Rmu_sc0002052.1_g000004 Rmu_sc0002052.1_g000011 Rmu_sc0002277.1_g000003 Rmu_sc0002277.1_g000006 Rmu_sc0002277.1_g000024 Rmu_sc0002658.1_g000012 Rmu_sc0003512.1_g000004 Rmu_sc0003512.1_g000007 Rmu_sc0004180.1_g000016 Rmu_sc0004180.1_g000029 Rmu_sc0004180.1_g000034 Rmu_sc0005639.1_g000008 Rmu_sc0005639.1_g000023 Rmu_sc0006070.1_g000016 Rmu_sc0006070.1_g000017 Rmu_sc0006966.1_g000021 Rmu_sc0006966.1_g000023 Rmu_sc0007239.1_g000003 Rmu_sc0008460.1_g000010 Rmu_sc0009984.1_g000008 Rmu_sc0010181.1_g000005 Rmu_sc0010181.1_g000010 Rmu_sc0010503.1_g000006 Rmu_sc0011646.1_g000003 Rmu_sc0012984.1_g000011 Rmu_sc0016972.1_g000005 Rmu_sc0016972.1_g000008 Rmu_sc0023070.1_g000003 Rmu_sc0025660.1_g000001 Rmu_ssc0000322.1_g000019
rosa_roxburghii Rroxscaffold_1G00038860 Rroxscaffold_1G00053490 Rroxscaffold_1G00053500 Rroxscaffold_1G00054230 Rroxscaffold_1G00056460 Rroxscaffold_1G00056470 Rroxscaffold_1G00056480 Rroxscaffold_1G00056500 Rroxscaffold_1G00056510 Rroxscaffold_1G00056620 Rroxscaffold_1G00056690 Rroxscaffold_1G00056710 Rroxscaffold_1G00056720 Rroxscaffold_1G00056730 Rroxscaffold_1G00056740 Rroxscaffold_1G00056750 Rroxscaffold_1G00056760 Rroxscaffold_1G00056870 Rroxscaffold_1G00056900 Rroxscaffold_1G00057120 Rroxscaffold_1G00057560 Rroxscaffold_2G00077430 Rroxscaffold_2G00102160 Rroxscaffold_3G00231420 Rroxscaffold_3G00231430 Rroxscaffold_4G00297230 Rroxscaffold_4G00331570 Rroxscaffold_6G00396700 Rroxscaffold_6G00400940 Rroxscaffold_7G00192740
rosa_rugosa Rorug01G0004400 Rorug01G0004500 Rorug02G0377600 Rorug02G0378000 Rorug02G0582800 Rorug02G0583400 Rorug03G0187000 Rorug03G0218800 Rorug04G0081200 Rorug05G0062700 Rorug05G0062700 Rorug05G0063100 Rorug05G0063200 Rorug05G0063200 Rorug05G0063200 Rorug05G0067000 Rorug05G0069700 Rorug05G0069900 Rorug05G0070000 Rorug05G0070100 Rorug05G0070300 Rorug05G0070400 Rorug05G0070600 Rorug05G0070600 Rorug05G0072300 Rorug05G0072400 Rorug05G0072500 Rorug05G0072500 Rorug05G0072600.1 Rorug05G0072700 Rorug05G0072800 Rorug05G0072800 Rorug05G0072900 Rorug05G0073000 Rorug05G0073000 Rorug05G0073400 Rorug05G0073400 Rorug05G0073400 Rorug05G0074800 Rorug05G0075000 Rorug05G0114300 Rorug05G0194200 Rorug06G0097800
rosa_samantha Rh2AG401400 Rh2CG387600 Rh2CG417000 Rh2CG637400 Rh5CG169600 Rh5CG172100 Rh5CG175200 Rh5CG317100 Rh6DG187900
rosa_wichuraiana Rw1G000750 Rw1G000790 Rw1G000820 Rw1G000860 Rw1G000880 Rw1G000910 Rw2G035180 Rw2G035200 Rw2G035240 Rw2G054370 Rw2G054380 Rw5G013570 Rw5G013580 Rw5G013590 Rw5G013910 Rw5G013980 Rw5G014110 Rw5G014120 Rw5G014280 Rw5G014310 Rw5G014400 Rw5G014420 Rw5G014440 Rw5G014460 Rw5G014480 Rw5G014500 Rw5G014520 Rw5G014530 Rw5G042390

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 1 cut(s) 1629
Acc65I GGTACC 1 cut(s) 2510
AccB1I GGYRCC 1 cut(s) 2510
AccBSI CCGCTC 1 cut(s) 1191
AccIII TCCGGA 1 cut(s) 291
AciI CCGC 5 cut(s) 262, 742, 1191, 1361, 2760
AclWI GGATC 4 cut(s) 642, 2330, 2542, 2720
AcoI YGGCCR 2 cut(s) 99, 1662
AcuI CTGAAG 2 cut(s) 2502, 2682
AfaI GTAC 5 cut(s) 76, 877, 2293, 2414, 2512
AfeI AGCGCT 1 cut(s) 162
AfiI CCNNNNNNNGG 7 cut(s) 515, 1057, 1262, 1430, 1431, 1707, 2809
AflII CTTAAG 1 cut(s) 1475
AflIII ACRYGT 1 cut(s) 1338
AgeI ACCGGT 1 cut(s) 266
AjiI CACGTC 2 cut(s) 1341, 1357
AjnI CCWGG 2 cut(s) 393, 2785
AjuI GAANNNNNNNTTGG 4 cut(s) 568, 600, 2557, 2589
Alw21I GWGCWC 1 cut(s) 112
Alw26I GTCTC 6 cut(s) 597, 1066, 1317, 1836, 1908, 2118
Alw44I GTGCAC 1 cut(s) 108
AlwI GGATC 4 cut(s) 642, 2330, 2542, 2720
AlwNI CAGNNNCTG 1 cut(s) 2236
Ama87I CYCGRG 1 cut(s) 1996
Aor13HI TCCGGA 1 cut(s) 291
Aor51HI AGCGCT 1 cut(s) 162
AoxI GGCC 5 cut(s) 99, 889, 1642, 1662, 1709
ApaI GGGCCC 1 cut(s) 1646
ApaLI GTGCAC 1 cut(s) 108
ApeKI GCWGC 2 cut(s) 1194, 1813
AseI ATTAAT 1 cut(s) 2027
AsiGI ACCGGT 1 cut(s) 266
Asp700I GAANNNNTTC 3 cut(s) 809, 2695, 2954
Asp718I GGTACC 1 cut(s) 2510
AspLEI GCGC 1 cut(s) 163
AspS9I GGNCC 8 cut(s) 286, 397, 818, 1421, 1642, 1643, 1709, 2202
AsuC2I CCSGG 2 cut(s) 1300, 1708
AsuHPI GGTGA 3 cut(s) 8, 2084, 2483
AvaI CYCGRG 1 cut(s) 1996
AvaII GGWCC 5 cut(s) 286, 397, 818, 1421, 2202
AxyI CCTNAGG 1 cut(s) 1066
BaeGI GKGCMC 3 cut(s) 112, 1646, 2786
BalI TGGCCA 1 cut(s) 101
BanI GGYRCC 1 cut(s) 2510
BanII GRGCYC 2 cut(s) 1124, 1646
BarI GAAGNNNNNNTAC 2 cut(s) 2305, 2337
BbsI GAAGAC 2 cut(s) 1023, 1239
Bbv12I GWGCWC 1 cut(s) 112
BbvCI CCTCAGC 1 cut(s) 20
BbvI GCAGC 2 cut(s) 1181, 1825
BccI CCATC 7 cut(s) 277, 1591, 2063, 2613, 2737, 2758, 2812
BciT130I CCWGG 2 cut(s) 395, 2787
BciVI GTATCC 2 cut(s) 2185, 2806
BcnI CCSGG 2 cut(s) 1300, 1708
BcoDI GTCTC 6 cut(s) 597, 1066, 1317, 1836, 1908, 2118
BfaI CTAG 5 cut(s) 1022, 1547, 1973, 2526, 2916
BfoI RGCGCY 1 cut(s) 164
BfrI CTTAAG 1 cut(s) 1475
BfuI GTATCC 2 cut(s) 2185, 2806
BisI GCNGC 4 cut(s) 1192, 1195, 1814, 2761
BlsI GCNGC 4 cut(s) 1193, 1196, 1815, 2762
BmcAI AGTACT 1 cut(s) 76
Bme1390I CCNGG 4 cut(s) 395, 1300, 1708, 2787
Bme18I GGWCC 5 cut(s) 286, 397, 818, 1421, 2202
BmeT110I CYCGRG 1 cut(s) 1996
BmgBI CACGTC 2 cut(s) 1341, 1357
BmgT120I GGNCC 8 cut(s) 286, 397, 818, 1421, 1642, 1643, 1709, 2202
BmiI GGNNCC 4 cut(s) 1374, 1423, 1644, 2512
BmrFI CCNGG 4 cut(s) 395, 1300, 1708, 2787
BmsI GCATC 3 cut(s) 150, 181, 1728
BoxI GACNNNNGTC 1 cut(s) 2271
BpiI GAAGAC 2 cut(s) 1023, 1239
BpmI CTGGAG 1 cut(s) 2808
Bpu10I CCTNAGC 2 cut(s) 20, 401
BpuMI CCSGG 2 cut(s) 1300, 1708
Bsa29I ATCGAT 1 cut(s) 322
BsaBI GATNNNNATC 1 cut(s) 417
BsaI GGTCTC 1 cut(s) 1066
BsaJI CCNNGG 3 cut(s) 1099, 1256, 2785
BsaWI WCCGGW 2 cut(s) 266, 291
BsaXI ACNNNNNCTCC 2 cut(s) 1849, 1879
Bsc4I CCNNNNNNNGG 7 cut(s) 515, 1057, 1262, 1430, 1431, 1707, 2809
Bse118I RCCGGY 2 cut(s) 266, 1057
Bse1I ACTGG 3 cut(s) 102, 2040, 2545
Bse21I CCTNAGG 1 cut(s) 1066
Bse3DI GCAATG 1 cut(s) 24
Bse8I GATNNNNATC 1 cut(s) 417
BseAI TCCGGA 1 cut(s) 291
BseBI CCWGG 2 cut(s) 395, 2787
BseCI ATCGAT 1 cut(s) 322
BseDI CCNNGG 3 cut(s) 1099, 1256, 2785
BseGI GGATG 5 cut(s) 1151, 1369, 1539, 1583, 2729
BseJI GATNNNNATC 1 cut(s) 417
BseLI CCNNNNNNNGG 7 cut(s) 515, 1057, 1262, 1430, 1431, 1707, 2809
BseMI GCAATG 1 cut(s) 24
BseMII CTCAG 3 cut(s) 34, 1238, 1451
BseNI ACTGG 3 cut(s) 102, 2040, 2545
BseRI GAGGAG 3 cut(s) 469, 510, 2122
BseSI GKGCMC 3 cut(s) 112, 1646, 2786
BseXI GCAGC 2 cut(s) 1181, 1825
BseYI CCCAGC 2 cut(s) 1042, 2229
BshFI GGCC 5 cut(s) 101, 891, 1644, 1664, 1711
BshNI GGYRCC 1 cut(s) 2510
BshTI ACCGGT 1 cut(s) 266
BshVI ATCGAT 1 cut(s) 322
BsiHKAI GWGCWC 1 cut(s) 112
BsiHKCI CYCGRG 1 cut(s) 1996
BsiSI CCGG 5 cut(s) 267, 292, 1058, 1300, 1707
BslFI GGGAC 4 cut(s) 1227, 1327, 1407, 3026
BslI CCNNNNNNNGG 7 cut(s) 515, 1057, 1262, 1430, 1431, 1707, 2809
BsmAI GTCTC 6 cut(s) 597, 1066, 1317, 1836, 1908, 2118
BsmFI GGGAC 4 cut(s) 1227, 1327, 1407, 3026
BsmI GAATGC 1 cut(s) 1197
BsnI GGCC 5 cut(s) 101, 891, 1644, 1664, 1711
Bso31I GGTCTC 1 cut(s) 1066
BsoBI CYCGRG 1 cut(s) 1996
Bsp120I GGGCCC 1 cut(s) 1642
Bsp1286I GDGCHC 4 cut(s) 112, 1124, 1646, 2786
Bsp13I TCCGGA 1 cut(s) 291
Bsp1407I TGTACA 1 cut(s) 2412
BspACI CCGC 5 cut(s) 262, 742, 1191, 1361, 2760
BspANI GGCC 5 cut(s) 101, 891, 1644, 1664, 1711
BspCNI CTCAG 3 cut(s) 33, 1237, 1452
BspDI ATCGAT 1 cut(s) 322
BspEI TCCGGA 1 cut(s) 291
BspLI GGNNCC 4 cut(s) 1374, 1423, 1644, 2512
BspPI GGATC 4 cut(s) 642, 2330, 2542, 2720
BspT107I GGYRCC 1 cut(s) 2510
BspTI CTTAAG 1 cut(s) 1475
BspTNI GGTCTC 1 cut(s) 1066
BsrBI CCGCTC 1 cut(s) 1191
BsrDI GCAATG 1 cut(s) 24
BsrFI RCCGGY 2 cut(s) 266, 1057
BsrGI TGTACA 1 cut(s) 2412
BsrI ACTGG 3 cut(s) 102, 2040, 2545
BssAI RCCGGY 2 cut(s) 266, 1057
BssECI CCNNGG 3 cut(s) 1099, 1256, 2785
BssT1I CCWWGG 2 cut(s) 1099, 1256
Bst2UI CCWGG 2 cut(s) 395, 2787
Bst4CI ACNGT 4 cut(s) 14, 2154, 2202, 2238
Bst6I CTCTTC 4 cut(s) 64, 313, 607, 966
BstAFI CTTAAG 1 cut(s) 1475
BstAPI GCANNNNNTGC 2 cut(s) 1819, 2871
BstAUI TGTACA 1 cut(s) 2412
BstC8I GCNNGC 1 cut(s) 923
BstEII GGTNACC 1 cut(s) 518
BstF5I GGATG 5 cut(s) 1151, 1369, 1539, 1583, 2729
BstH2I RGCGCY 1 cut(s) 164
BstHHI GCGC 1 cut(s) 163
BstMAI GTCTC 6 cut(s) 597, 1066, 1317, 1836, 1908, 2118
BstMWI GCNNNNNNNGC 6 cut(s) 107, 261, 888, 1819, 2716, 2871
BstNI CCWGG 2 cut(s) 395, 2787
BstNSI RCATGY 2 cut(s) 70, 1813
BstPAI GACNNNNGTC 1 cut(s) 2271
BstPI GGTNACC 1 cut(s) 518
BstSCI CCNGG 4 cut(s) 393, 1298, 1706, 2785
BstSLI GKGCMC 3 cut(s) 112, 1646, 2786
BstV1I GCAGC 2 cut(s) 1181, 1825
BstV2I GAAGAC 2 cut(s) 1023, 1239
BstX2I RGATCY 2 cut(s) 634, 2547
BstXI CCANNNNNNTGG 3 cut(s) 1512, 2308, 2740
BstYI RGATCY 2 cut(s) 634, 2547
Bsu15I ATCGAT 1 cut(s) 322
Bsu36I CCTNAGG 1 cut(s) 1066
BsuI GTATCC 2 cut(s) 2185, 2806
BsuRI GGCC 5 cut(s) 101, 891, 1644, 1664, 1711
BsuTUI ATCGAT 1 cut(s) 322
BtrI CACGTC 2 cut(s) 1341, 1357
BtsCI GGATG 5 cut(s) 1151, 1369, 1539, 1583, 2729
BtsI GCAGTG 2 cut(s) 127, 737
BtsIMutI CAGTG 6 cut(s) 10, 109, 127, 737, 2033, 2159
Cac8I GCNNGC 1 cut(s) 923
CaiI CAGNNNCTG 1 cut(s) 2236
CfoI GCGC 1 cut(s) 163
Cfr10I RCCGGY 2 cut(s) 266, 1057
Cfr13I GGNCC 8 cut(s) 286, 397, 818, 1421, 1642, 1643, 1709, 2202
ClaI ATCGAT 1 cut(s) 322
CseI GACGC 1 cut(s) 474
Csp6I GTAC 5 cut(s) 75, 876, 2292, 2413, 2511
CspAI ACCGGT 1 cut(s) 266
CspCI CAANNNNNGTGG 2 cut(s) 2197, 2232
CviQI GTAC 5 cut(s) 75, 876, 2292, 2413, 2511
DraI TTTAAA 3 cut(s) 175, 387, 1078
EaeI YGGCCR 2 cut(s) 99, 1662
Eam1104I CTCTTC 4 cut(s) 64, 313, 607, 966
EarI CTCTTC 4 cut(s) 64, 313, 607, 966
EciI GGCGGA 1 cut(s) 1376
Eco130I CCWWGG 2 cut(s) 1099, 1256
Eco24I GRGCYC 2 cut(s) 1124, 1646
Eco31I GGTCTC 1 cut(s) 1066
Eco32I GATATC 1 cut(s) 1527
Eco47I GGWCC 5 cut(s) 286, 397, 818, 1421, 2202
Eco47III AGCGCT 1 cut(s) 162
Eco57I CTGAAG 2 cut(s) 2502, 2682
Eco81I CCTNAGG 1 cut(s) 1066
Eco88I CYCGRG 1 cut(s) 1996
Eco91I GGTNACC 1 cut(s) 518
EcoO109I RGGNCCY 2 cut(s) 1421, 1642
EcoO65I GGTNACC 1 cut(s) 518
EcoRI GAATTC 2 cut(s) 1750, 2691
EcoRII CCWGG 2 cut(s) 393, 2785
EcoRV GATATC 1 cut(s) 1527
EcoT14I CCWWGG 2 cut(s) 1099, 1256
EcoT22I ATGCAT 3 cut(s) 143, 1945, 2876
EcoT38I GRGCYC 2 cut(s) 1124, 1646
ErhI CCWWGG 2 cut(s) 1099, 1256
FalI AAGNNNNNCTT 4 cut(s) 326, 358, 2680, 2712
FaqI GGGAC 4 cut(s) 1227, 1327, 1407, 3026
Fnu4HI GCNGC 4 cut(s) 1192, 1195, 1814, 2761
FokI GGATG 5 cut(s) 1138, 1376, 1526, 1570, 2716
FriOI GRGCYC 2 cut(s) 1124, 1646
Fsp4HI GCNGC 4 cut(s) 1192, 1195, 1814, 2761
FspBI CTAG 5 cut(s) 1022, 1547, 1973, 2526, 2916
GlaI GCGC 1 cut(s) 162
GluI GCNGC 4 cut(s) 1192, 1195, 1814, 2761
GsaI CCCAGC 2 cut(s) 1046, 2233
GsuI CTGGAG 1 cut(s) 2808
HaeII RGCGCY 1 cut(s) 164
HaeIII GGCC 5 cut(s) 101, 891, 1644, 1664, 1711
HapII CCGG 5 cut(s) 267, 292, 1058, 1300, 1707
HgaI GACGC 1 cut(s) 474
HhaI GCGC 1 cut(s) 163
Hin6I GCGC 1 cut(s) 161
HinP1I GCGC 1 cut(s) 161
HindIII AAGCTT 2 cut(s) 403, 2629
HpaII CCGG 5 cut(s) 267, 292, 1058, 1300, 1707
HphI GGTGA 3 cut(s) 8, 2084, 2483
Hpy166II GTNNAC 4 cut(s) 110, 1876, 2219, 2413
Hpy188I TCNGA 5 cut(s) 199, 626, 1495, 2350, 2564
Hpy8I GTNNAC 4 cut(s) 110, 1876, 2219, 2413
Hpy99I CGWCG 2 cut(s) 149, 1358
HpyCH4III ACNGT 4 cut(s) 14, 2154, 2202, 2238
HpyCH4IV ACGT 2 cut(s) 1340, 1356
HpyF10VI GCNNNNNNNGC 6 cut(s) 107, 261, 888, 1819, 2716, 2871
HpySE526I ACGT 2 cut(s) 1340, 1356
HspAI GCGC 1 cut(s) 161
Kpn2I TCCGGA 1 cut(s) 291
KpnI GGTACC 1 cut(s) 2514
LmnI GCTCC 5 cut(s) 448, 744, 1392, 1911, 1956
Lsp1109I GCAGC 2 cut(s) 1181, 1825
LweI GCATC 3 cut(s) 150, 181, 1728
MaeI CTAG 5 cut(s) 1022, 1547, 1973, 2526, 2916
MaeII ACGT 2 cut(s) 1340, 1356
MaeIII GTNAC 9 cut(s) 14, 221, 518, 696, 1017, 1302, 1672, 1805, 2273
MbiI CCGCTC 1 cut(s) 1191
MfeI CAATTG 4 cut(s) 655, 1817, 2534, 2920
MflI RGATCY 2 cut(s) 634, 2547
MhlI GDGCHC 4 cut(s) 112, 1124, 1646, 2786
MlsI TGGCCA 1 cut(s) 101
MluNI TGGCCA 1 cut(s) 101
MlyI GAGTC 2 cut(s) 660, 1025
MmeI TCCRAC 2 cut(s) 1617, 2229
Mox20I TGGCCA 1 cut(s) 101
Mph1103I ATGCAT 3 cut(s) 143, 1945, 2876
MroI TCCGGA 1 cut(s) 291
MroXI GAANNNNTTC 3 cut(s) 809, 2695, 2954
MscI TGGCCA 1 cut(s) 101
MslI CAYNNNNRTG 4 cut(s) 813, 1851, 2738, 2755
Msp20I TGGCCA 1 cut(s) 101
MspCI CTTAAG 1 cut(s) 1475
MspI CCGG 5 cut(s) 267, 292, 1058, 1300, 1707
MspR9I CCNGG 4 cut(s) 395, 1300, 1708, 2787
MunI CAATTG 4 cut(s) 655, 1817, 2534, 2920
Mva1269I GAATGC 1 cut(s) 1197
MvaI CCWGG 2 cut(s) 395, 2787
MwoI GCNNNNNNNGC 6 cut(s) 107, 261, 888, 1819, 2716, 2871
NciI CCSGG 2 cut(s) 1300, 1708
NlaIV GGNNCC 4 cut(s) 1374, 1423, 1644, 2512
NmuCI GTSAC 5 cut(s) 14, 221, 1017, 1672, 2273
NsiI ATGCAT 3 cut(s) 143, 1945, 2876
NspI RCATGY 2 cut(s) 70, 1813
PctI GAATGC 1 cut(s) 1197
PdmI GAANNNNTTC 3 cut(s) 809, 2695, 2954
PinAI ACCGGT 1 cut(s) 266
PkrI GCNGC 4 cut(s) 1193, 1196, 1815, 2762
PleI GAGTC 2 cut(s) 659, 1024
PpsI GAGTC 2 cut(s) 659, 1024
PpuMI RGGWCCY 1 cut(s) 1421
PshAI GACNNNNGTC 1 cut(s) 2271
PshBI ATTAAT 1 cut(s) 2027
PsiI TTATAA 1 cut(s) 1629
Psp5II RGGWCCY 1 cut(s) 1421
Psp6I CCWGG 2 cut(s) 393, 2785
PspEI GGTNACC 1 cut(s) 518
PspFI CCCAGC 2 cut(s) 1042, 2229
PspGI CCWGG 2 cut(s) 393, 2785
PspN4I GGNNCC 4 cut(s) 1374, 1423, 1644, 2512
PspOMI GGGCCC 1 cut(s) 1642
PspPI GGNCC 8 cut(s) 286, 397, 818, 1421, 1642, 1643, 1709, 2202
PspPPI RGGWCCY 1 cut(s) 1421
PsrI GAACNNNNNNTAC 2 cut(s) 2654, 2686
PstNI CAGNNNCTG 1 cut(s) 2236
PsuI RGATCY 2 cut(s) 634, 2547
RsaI GTAC 5 cut(s) 76, 877, 2293, 2414, 2512
RsaNI GTAC 5 cut(s) 75, 876, 2292, 2413, 2511
RseI CAYNNNNRTG 4 cut(s) 813, 1851, 2738, 2755
SatI GCNGC 4 cut(s) 1192, 1195, 1814, 2761
Sau96I GGNCC 8 cut(s) 286, 397, 818, 1421, 1642, 1643, 1709, 2202
ScaI AGTACT 1 cut(s) 76
SchI GAGTC 2 cut(s) 660, 1025
ScrFI CCNGG 4 cut(s) 395, 1300, 1708, 2787
SduI GDGCHC 4 cut(s) 112, 1124, 1646, 2786
SfaNI GCATC 3 cut(s) 150, 181, 1728
SinI GGWCC 5 cut(s) 286, 397, 818, 1421, 2202
SmiI ATTTAAAT 1 cut(s) 387
SmiMI CAYNNNNRTG 4 cut(s) 813, 1851, 2738, 2755
SmlI CTYRAG 1 cut(s) 1475
SmoI CTYRAG 1 cut(s) 1475
SsiI CCGC 5 cut(s) 262, 742, 1191, 1361, 2760
SspI AATATT 5 cut(s) 1006, 1726, 1789, 2005, 2461
SspMI CTAG 5 cut(s) 1022, 1547, 1973, 2526, 2916
StyD4I CCNGG 4 cut(s) 393, 1298, 1706, 2785
StyI CCWWGG 2 cut(s) 1099, 1256
SwaI ATTTAAAT 1 cut(s) 387
TaaI ACNGT 4 cut(s) 14, 2154, 2202, 2238
TaiI ACGT 2 cut(s) 1343, 1359
TaqI TCGA 7 cut(s) 144, 322, 1239, 1353, 2265, 2580, 2890
TatI WGTACW 2 cut(s) 74, 2412
TauI GCSGC 2 cut(s) 1194, 2763
TscAI CASTG 6 cut(s) 17, 109, 127, 744, 2040, 2159
TseFI GTSAC 5 cut(s) 14, 221, 1017, 1672, 2273
TseI GCWGC 2 cut(s) 1194, 1813
Tsp45I GTSAC 5 cut(s) 14, 221, 1017, 1672, 2273
TspGWI ACGGA 1 cut(s) 1289
TspRI CASTG 6 cut(s) 17, 109, 127, 744, 2040, 2159
Vha464I CTTAAG 1 cut(s) 1475
VneI GTGCAC 1 cut(s) 108
VpaK11BI GGWCC 5 cut(s) 286, 397, 818, 1421, 2202
VspI ATTAAT 1 cut(s) 2027
XbaI TCTAGA 1 cut(s) 1972
XceI RCATGY 2 cut(s) 70, 1813
XcmI CCANNNNNNNNNTGG 2 cut(s) 1608, 1653
XmnI GAANNNNTTC 3 cut(s) 809, 2695, 2954
XspI CTAG 5 cut(s) 1022, 1547, 1973, 2526, 2916
ZrmI AGTACT 1 cut(s) 76
Zsp2I ATGCAT 3 cut(s) 143, 1945, 2876
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.