MD05G1235900.v1.1

LRR receptor-like serine threonine-protein kinase

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
malus_domestica
Chr05
OG0000048
Physical Location & Seq
Reverse (-)
36747303 .. 36749156
1854 bp
Loading structure...
UTR
Exon/CDS
Intron
MD05G1235900.v1.1.491

Sequence Viewer

Length: 1854 bp
ATGGATTCCCACCATCACCTCAGTATTGCTCACTATTTCCTTCTTGTTCTTTTGACCTCTTCCTACATGCAGAGTACTACTAAAACCTGTTTCTGTTTGGCCGGTGGTGCACTTTCAAGCAGTGTGAAAACAAATCCATGCATCGACAAAGAAAGACAAGCGCTTCTCATCTTTAAACAACATCTTGTTGATCCTTCTGGCAGGCTTTCCTCTTGGGTAGGTCACGATTGCTGTCAATGGAAAGGTGTTTCATGCAACAACCGGACCGGTCATGTGGTGAAGATGGACCTCCGGAATCCGTATGAAGAGCGGGACATGTATGAAAAGTTTCGCTTGGGAGGTAAGATAAATGCTTCTCTGTTGAGCTTGAAACATTTAAATTACCTGGACCTAAGCAATAATGATTTTTATAGCATTCAAGTTCCTAACTTCTTCGGGGAGCTTAAAAGTTTGCAATATCTCAATCTCTCCTCTGCGTCATTTGGAGGAGAGATTCCCCCTTCTCTTGGTAATCTGTCAAGCCTCAATTTTCTTGATCTTGGGTGGAATATTGGCTTAACTTCCAGAAAGTTGAATTGGCTGTCTCGCCTTTCTTCTCTTAAATACCTTGATCTCGGATCGGTGGATCTTAGCACCAAAGCAGTCAATTGGGTGTATGCTGTTAATATGCTTCCTTCATTAGCAGAGTTACTCTTATCTTTTTGCCGAATTGAAATCATTCCACTCATCTCACTGCGACACATTAATTTGACATCACTTTTGGTACTTGATGTGTCAGATAATATGTTTAGTTCTTCATTTCCCAGCTGGCTTTTTAATCTCACCAGCCTCATAACACTTGATATATCTGGGAATCATTTCAATGGTAATTTTCCAAAAGTCATTGGAAATTTGTGCAAGCTAAAGGTCTTAAGCCTTTCTCAAAACGAATTTAAAGGGGGTATTGAAGAGTTTTGGAGGAGTTTCTCGAATTGTCCAAATATAGCATTAGAGTCCCTAGATTTGTCTTATTGTGAGCTGGAAAGCCAACTGCCTGCCTCCTTAGGATTGTTTAAAAGTTTGCAGAAGCTTGATCTCGAAAGCAATCTATTTTTCGGGCCAATTCCCTCTAATATTGACCAAATGATGCCCAATTTGGATGCCTTGTTACTTTCTGAGAATCATTTGACTGGCACTATTCCTCCCTCCGTTTGCAACATGCAGCAATTGGGAGTCTTGTCTCTAAGGAGCAATCAATTTTATGGAGAATTGCCTCGTGCATGGAATGTGGGGAGCAAACTGTGGTTTCTAGATGTTGGTCTGAACAATCTCTCTGGTAATATTCCCACTTCATTGGGGGTATTAAGTTCACTGCAAGTATTAAAGCTCAACAACAACAATTTTGGGGGTGAAATTCCTAATTCGTTGCGAAATTGTTCTATTTTGAGAAGTCTAGATCTCGGAGACAACAAGTTATATGGTAACATACCTCTATGGATAGGAGGACCAAATGTATCCGTGTTGTACTGGATACAATTACGGTCCAACTCTTTTAGTGGACATCTATCCCAGCAACTGTGCAATCTTCGACATCTTCATATCCTTGACCTTAGTCACAACAACCTTTCAGGTACTATTCCCAAGTGTCTGGATAATTTGGCTTCGCTGGTGGACGATTTAAATGCAGACACTATTGGTGCTATTGAGCAAATCACACTGACACTAAAAGGAAGAGAACTTGTGTACAACAAGACTATAAATCTTGTAAAGAGCATTGATCTTTCATCAAATAATTTACAAGGTGAAATCCCTGAAGAAATAAGTAGCCTCATTCAATTCGGTACCTTGAACTTATCCAGGAATCAATTAACGTGA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
LRRNT_2 LRR_1 LRR_8

Protein Analysis

618

Amino Acids

68.6

Weight (kDa)

6.31

Isoelectric Point (pI)

40.57

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
LRRNT_2 PF08263 49 - 86 4.1e-13 Leucine rich repeat N-terminal domain
LRR_14 PF23598 119 - 234 8e-10 Leucine-rich repeat region
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes (Group: OG0000048)

Species Orthologous Gene IDs
arabidopsis_thaliana AT2G34930
fragaria_vesca FvH4_3g12670 FvH4_3g12672 FvH4_3g12740 FvH4_3g12742 FvH4_3g12770 FvH4_3g12770 FvH4_3g12860 FvH4_3g12890 FvH4_3g13431 FvH4_3g13433 FvH4_3g13435 FvH4_3g13470 FvH4_3g13470 FvH4_3g13480 FvH4_3g13562 FvH4_3g13580 FvH4_3g13600 FvH4_3g13600 FvH4_3g13600 FvH4_3g13600 FvH4_3g13600 FvH4_3g13600 FvH4_3g13610 FvH4_3g13620 FvH4_3g13620 FvH4_3g23240 FvH4_3g32910 FvH4_3g35070 FvH4_3g45520 FvH4_5g08430 FvH4_5g08450 FvH4_6g53230 FvH4_6g53300
malus_domestica MD05G1217600.v1.1 MD05G1217700.v1.1 MD05G1224700.v1.1 MD05G1225100.v1.1 MD05G1225300.v1.1 MD05G1225400.v1.1 MD05G1235900.v1.1 MD05G1236100.v1.1 MD05G1236300.v1.1 MD05G1237200.v1.1 MD05G1241600.v1.1 MD05G1245700.v1.1 MD05G1245800.v1.1 MD05G1245900.v1.1 MD05G1246000.v1.1 MD05G1246100.v1.1 MD05G1246300.v1.1 MD05G1246400.v1.1 MD05G1246500.v1.1 MD05G1248100.v1.1 MD05G1248200.v1.1 MD05G1264300.v1.1 MD05G1275900.v1.1 MD07G1051400.v1.1 MD09G1012600.v1.1 MD09G1012700.v1.1 MD09G1012800.v1.1 MD10G1221400.v1.1 MD10G1221500.v1.1 MD10G1221600.v1.1 MD10G1221900.v1.1 MD10G1222200.v1.1 MD10G1222400.v1.1 MD10G1222500.v1.1 MD10G1222900.v1.1 MD10G1223000.v1.1 MD10G1223100.v1.1 MD10G1223500.v1.1 MD10G1228000.v1.1 MD12G1019600.v1.1 MD12G1020000.v1.1 MD12G1020100.v1.1 MD17G1013200.v1.1 MD17G1013300.v1.1 MD17G1013400.v1.1
prunus_persica Prupe.1G060500_v2.0.a1 Prupe.1G100100_v2.0.a1 Prupe.3G124000_v2.0.a1 Prupe.3G304400_v2.0.a1 Prupe.4G116800_v2.0.a1 Prupe.4G116900_v2.0.a1 Prupe.4G117000_v2.0.a1 Prupe.4G121800_v2.0.a1 Prupe.4G121900_v2.0.a1 Prupe.4G122000_v2.0.a1 Prupe.4G122100_v2.0.a1 Prupe.4G122200_v2.0.a1 Prupe.4G122300_v2.0.a1 Prupe.4G122500_v2.0.a1 Prupe.4G122600_v2.0.a1 Prupe.4G122800_v2.0.a1 Prupe.4G122900_v2.0.a1 Prupe.4G123000_v2.0.a1 Prupe.4G123100_v2.0.a1 Prupe.4G123200_v2.0.a1 Prupe.4G131500_v2.0.a1 Prupe.4G131600_v2.0.a1 Prupe.7G032500_v2.0.a1 Prupe.7G032900_v2.0.a1 Prupe.7G033000_v2.0.a1 Prupe.7G033100_v2.0.a1 Prupe.7G033300_v2.0.a1 Prupe.7G033600_v2.0.a1 Prupe.7G034600_v2.0.a1 Prupe.7G040200_v2.0.a1 Prupe.7G059200_v2.0.a1
pyrus_communis pycom05g20580 pycom05g20590 pycom05g20760 pycom05g20800 pycom05g21280 pycom05g21290 pycom05g21820 pycom05g21830 pycom05g22180 pycom05g22190 pycom05g22210 pycom05g22450 pycom05g22460 pycom05g22470 pycom05g22480 pycom05g22490 pycom05g23770 pycom05g23780 pycom05g24050 pycom05g24060 pycom07g03910 pycom10g18700 pycom10g18720 pycom10g18730 pycom10g18740 pycom10g19150 pycom111g01060 pycom12g01660 pycom12g01690 pycom12g01720 pycom12g01740 pycom12g01750 pycom12g01770 pycom12g01810 pycom12g01820 pycom12g01830 pycom12g01840 pycom12g01870 pycom12g01900 pycom17g01060 pycom17g01070
rosa_chinensis RchiOBHm_Chr1g0315041 RchiOBHm_Chr1g0315051 RchiOBHm_Chr1g0315071 RchiOBHm_Chr1g0315161 RchiOBHm_Chr1g0315211 RchiOBHm_Chr1g0315251 RchiOBHm_Chr1g0315321 RchiOBHm_Chr1g0315391 RchiOBHm_Chr1g0315451 RchiOBHm_Chr1g0315481 RchiOBHm_Chr1g0315551 RchiOBHm_Chr1g0315601 RchiOBHm_Chr1g0315621 RchiOBHm_Chr1g0359221 RchiOBHm_Chr2g0142981 RchiOBHm_Chr2g0143001 RchiOBHm_Chr2g0143061 RchiOBHm_Chr2g0143091 RchiOBHm_Chr2g0175321 RchiOBHm_Chr2g0175341 RchiOBHm_Chr2g0175361 RchiOBHm_Chr2g0175371 RchiOBHm_Chr3g0470491 RchiOBHm_Chr3g0480881 RchiOBHm_Chr3g0485511 RchiOBHm_Chr5g0020741 RchiOBHm_Chr5g0020901 RchiOBHm_Chr5g0020931 RchiOBHm_Chr5g0020941 RchiOBHm_Chr5g0020961 RchiOBHm_Chr5g0020971 RchiOBHm_Chr5g0021451 RchiOBHm_Chr5g0021531 RchiOBHm_Chr5g0021831 RchiOBHm_Chr5g0021841 RchiOBHm_Chr5g0021931 RchiOBHm_Chr5g0021941 RchiOBHm_Chr5g0021981 RchiOBHm_Chr5g0021991 RchiOBHm_Chr5g0022011 RchiOBHm_Chr5g0022181 RchiOBHm_Chr5g0022191 RchiOBHm_Chr5g0022211 RchiOBHm_Chr5g0022221 RchiOBHm_Chr5g0022231 RchiOBHm_Chr5g0022291 RchiOBHm_Chr5g0022301 RchiOBHm_Chr5g0022331 RchiOBHm_Chr5g0022361 RchiOBHm_Chr5g0022371 RchiOBHm_Chr5g0022381 RchiOBHm_Chr5g0022401 RchiOBHm_Chr5g0022431 RchiOBHm_Chr5g0022451 RchiOBHm_Chr5g0022541 RchiOBHm_Chr5g0022591 RchiOBHm_Chr5g0022601 RchiOBHm_Chr5g0022701 RchiOBHm_Chr5g0022741 RchiOBHm_Chr5g0022791 RchiOBHm_Chr5g0022811 RchiOBHm_Chr5g0022851 RchiOBHm_Chr5g0029441 RchiOBHm_Chr5g0041631 RchiOBHm_Chr5g0069391 RchiOBHm_Chr6g0273811 RchiOBHm_Chr6g0273831 RchiOBHm_Chr6g0275331 RchiOBHm_Chr7g0219061
rosa_laevigata RLG00000002463 RLG00000020007 RLG00000020008 RLG00000022320 RLG00000022321 RLG00000023446 RLG00000030742 RLG00000030743 RLG00000030747 RLG00000032557 RLG00000032564 RLG00000032571 RLG00000032573 RLG00000032574 RLG00000032612 RLG00000032633 RLG00000032636 RLG00000032638 RLG00000032650 RLG00000032651 RLG00000032652 RLG00000032653 RLG00000032655 RLG00000032673 RLG00000032678 RLG00000032769 RLG00000032857 RLG00000033168 RLG00000033465 RLG00000034086 RLG00000034222 RLG00000035290
rosa_multiflora Rmu_co8143358.1_g000001 Rmu_co8518791.1_g000001 Rmu_sc0000178.1_g000008 Rmu_sc0000178.1_g000014 Rmu_sc0000401.1_g000005 Rmu_sc0000401.1_g000013 Rmu_sc0000401.1_g000017 Rmu_sc0000401.1_g000018 Rmu_sc0000401.1_g000024 Rmu_sc0000401.1_g000025 Rmu_sc0000576.1_g000020 Rmu_sc0001585.1_g000003 Rmu_sc0001585.1_g000005 Rmu_sc0001585.1_g000008 Rmu_sc0001784.1_g000006 Rmu_sc0001784.1_g000011 Rmu_sc0001784.1_g000022 Rmu_sc0001784.1_g000028 Rmu_sc0002052.1_g000004 Rmu_sc0002052.1_g000011 Rmu_sc0002277.1_g000003 Rmu_sc0002277.1_g000006 Rmu_sc0002277.1_g000024 Rmu_sc0002658.1_g000012 Rmu_sc0003512.1_g000004 Rmu_sc0003512.1_g000007 Rmu_sc0004180.1_g000016 Rmu_sc0004180.1_g000029 Rmu_sc0004180.1_g000034 Rmu_sc0005639.1_g000008 Rmu_sc0005639.1_g000023 Rmu_sc0006070.1_g000016 Rmu_sc0006070.1_g000017 Rmu_sc0006966.1_g000021 Rmu_sc0006966.1_g000023 Rmu_sc0007239.1_g000003 Rmu_sc0008460.1_g000010 Rmu_sc0009984.1_g000008 Rmu_sc0010181.1_g000005 Rmu_sc0010181.1_g000010 Rmu_sc0010503.1_g000006 Rmu_sc0011646.1_g000003 Rmu_sc0012984.1_g000011 Rmu_sc0016972.1_g000005 Rmu_sc0016972.1_g000008 Rmu_sc0023070.1_g000003 Rmu_sc0025660.1_g000001 Rmu_ssc0000322.1_g000019
rosa_roxburghii Rroxscaffold_1G00038860 Rroxscaffold_1G00053490 Rroxscaffold_1G00053500 Rroxscaffold_1G00054230 Rroxscaffold_1G00056460 Rroxscaffold_1G00056470 Rroxscaffold_1G00056480 Rroxscaffold_1G00056500 Rroxscaffold_1G00056510 Rroxscaffold_1G00056620 Rroxscaffold_1G00056690 Rroxscaffold_1G00056710 Rroxscaffold_1G00056720 Rroxscaffold_1G00056730 Rroxscaffold_1G00056740 Rroxscaffold_1G00056750 Rroxscaffold_1G00056760 Rroxscaffold_1G00056870 Rroxscaffold_1G00056900 Rroxscaffold_1G00057120 Rroxscaffold_1G00057560 Rroxscaffold_2G00077430 Rroxscaffold_2G00102160 Rroxscaffold_3G00231420 Rroxscaffold_3G00231430 Rroxscaffold_4G00297230 Rroxscaffold_4G00331570 Rroxscaffold_6G00396700 Rroxscaffold_6G00400940 Rroxscaffold_7G00192740
rosa_rugosa Rorug01G0004400 Rorug01G0004500 Rorug02G0377600 Rorug02G0378000 Rorug02G0582800 Rorug02G0583400 Rorug03G0187000 Rorug03G0218800 Rorug04G0081200 Rorug05G0062700 Rorug05G0062700 Rorug05G0063100 Rorug05G0063200 Rorug05G0063200 Rorug05G0063200 Rorug05G0067000 Rorug05G0069700 Rorug05G0069900 Rorug05G0070000 Rorug05G0070100 Rorug05G0070300 Rorug05G0070400 Rorug05G0070600 Rorug05G0070600 Rorug05G0072300 Rorug05G0072400 Rorug05G0072500 Rorug05G0072500 Rorug05G0072600.1 Rorug05G0072700 Rorug05G0072800 Rorug05G0072800 Rorug05G0072900 Rorug05G0073000 Rorug05G0073000 Rorug05G0073400 Rorug05G0073400 Rorug05G0073400 Rorug05G0074800 Rorug05G0075000 Rorug05G0114300 Rorug05G0194200 Rorug06G0097800
rosa_samantha Rh2AG401400 Rh2CG387600 Rh2CG417000 Rh2CG637400 Rh5CG169600 Rh5CG172100 Rh5CG175200 Rh5CG317100 Rh6DG187900
rosa_wichuraiana Rw1G000750 Rw1G000790 Rw1G000820 Rw1G000860 Rw1G000880 Rw1G000910 Rw2G035180 Rw2G035200 Rw2G035240 Rw2G054370 Rw2G054380 Rw5G013570 Rw5G013580 Rw5G013590 Rw5G013910 Rw5G013980 Rw5G014110 Rw5G014120 Rw5G014280 Rw5G014310 Rw5G014400 Rw5G014420 Rw5G014440 Rw5G014460 Rw5G014480 Rw5G014500 Rw5G014520 Rw5G014530 Rw5G042390

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
Acc65I GGTACC 1 cut(s) 1820
AccB1I GGYRCC 1 cut(s) 1820
AccBSI CCGCTC 1 cut(s) 310
AccIII TCCGGA 1 cut(s) 291
AciI CCGC 1 cut(s) 310
AclWI GGATC 3 cut(s) 185, 625, 633
AcoI YGGCCR 1 cut(s) 99
AcsI RAATTY 3 cut(s) 889, 929, 1392
AcuI CTGAAG 1 cut(s) 1812
AfaI GTAC 6 cut(s) 76, 765, 1505, 1612, 1724, 1822
AfeI AGCGCT 1 cut(s) 162
AfiI CCNNNNNNNGG 1 cut(s) 506
AflII CTTAAG 1 cut(s) 910
AflIII ACRYGT 1 cut(s) 315
AgeI ACCGGT 1 cut(s) 266
AgsI TTSAA 9 cut(s) 117, 370, 419, 574, 713, 862, 947, 1814, 1828
AjnI CCWGG 2 cut(s) 384, 1835
AjuI GAANNNNNNNTTGG 2 cut(s) 559, 591
AluBI AGCT 7 cut(s) 366, 442, 807, 901, 1018, 1069, 1366
AluI AGCT 7 cut(s) 366, 442, 807, 901, 1018, 1069, 1366
Alw21I GWGCWC 1 cut(s) 112
Alw26I GTCTC 3 cut(s) 588, 1224, 1437
Alw44I GTGCAC 1 cut(s) 108
AlwI GGATC 3 cut(s) 185, 625, 633
AlwNI CAGNNNCTG 1 cut(s) 1555
Aor13HI TCCGGA 1 cut(s) 291
Aor51HI AGCGCT 1 cut(s) 162
AoxI GGCC 2 cut(s) 99, 1097
ApaLI GTGCAC 1 cut(s) 108
ApeKI GCWGC 1 cut(s) 1201
ApoI RAATTY 3 cut(s) 889, 929, 1392
ArsI GACNNNNNNTTYG 2 cut(s) 742, 774
AseI ATTAAT 1 cut(s) 744
AsiGI ACCGGT 1 cut(s) 266
Asp700I GAANNNNTTC 4 cut(s) 327, 717, 857, 1414
Asp718I GGTACC 1 cut(s) 1820
AspLEI GCGC 1 cut(s) 163
AspS9I GGNCC 6 cut(s) 264, 286, 388, 1097, 1484, 1521
AsuHPI GGTGA 5 cut(s) 8, 289, 814, 1400, 1793
AvaII GGWCC 5 cut(s) 264, 286, 388, 1484, 1521
AxyI CCTNAGG 1 cut(s) 1042
BaeGI GKGCMC 1 cut(s) 112
BanI GGYRCC 1 cut(s) 1820
BauI CACGAG 1 cut(s) 1254
Bbv12I GWGCWC 1 cut(s) 112
BbvI GCAGC 1 cut(s) 1213
BccI CCATC 2 cut(s) 21, 277
BcgI CGANNNNNNTGC 2 cut(s) 1643, 1677
BciT130I CCWGG 2 cut(s) 386, 1837
BciVI GTATCC 2 cut(s) 1503, 1504
BcoDI GTCTC 3 cut(s) 588, 1224, 1437
BfaI CTAG 3 cut(s) 998, 1289, 1433
BfoI RGCGCY 1 cut(s) 164
BfrI CTTAAG 1 cut(s) 910
BfuI GTATCC 2 cut(s) 1503, 1504
BglII AGATCT 1 cut(s) 1435
BisI GCNGC 1 cut(s) 1202
BlsI GCNGC 1 cut(s) 1203
BmcAI AGTACT 1 cut(s) 76
Bme1390I CCNGG 2 cut(s) 386, 1837
Bme18I GGWCC 5 cut(s) 264, 286, 388, 1484, 1521
BmgT120I GGNCC 6 cut(s) 264, 286, 388, 1097, 1484, 1521
BmiI GGNNCC 1 cut(s) 1822
BmrFI CCNGG 2 cut(s) 386, 1837
BmsI GCATC 3 cut(s) 150, 1116, 1129
BoxI GACNNNNGTC 1 cut(s) 1590
Bpu10I CCTNAGC 1 cut(s) 392
BsaWI WCCGGW 3 cut(s) 261, 266, 291
BsaXI ACNNNNNCTCC 2 cut(s) 1165, 1195
Bsc4I CCNNNNNNNGG 1 cut(s) 506
Bse118I RCCGGY 2 cut(s) 101, 266
Bse1I ACTGG 2 cut(s) 1174, 1511
Bse21I CCTNAGG 1 cut(s) 1042
BseAI TCCGGA 1 cut(s) 291
BseBI CCWGG 2 cut(s) 386, 1837
BseGI GGATG 1 cut(s) 1144
BseLI CCNNNNNNNGG 1 cut(s) 506
BseMII CTCAG 2 cut(s) 34, 1146
BseNI ACTGG 2 cut(s) 1174, 1511
BseRI GAGGAG 3 cut(s) 460, 501, 973
BseSI GKGCMC 1 cut(s) 112
BseXI GCAGC 1 cut(s) 1213
BseYI CCCAGC 2 cut(s) 803, 1548
BshFI GGCC 2 cut(s) 101, 1099
BshNI GGYRCC 1 cut(s) 1820
BshTI ACCGGT 1 cut(s) 266
BsiHKAI GWGCWC 1 cut(s) 112
BsiSI CCGG 4 cut(s) 102, 262, 267, 292
BslFI GGGAC 2 cut(s) 326, 979
BslI CCNNNNNNNGG 1 cut(s) 506
BsmAI GTCTC 3 cut(s) 588, 1224, 1437
BsmFI GGGAC 2 cut(s) 326, 979
BsmI GAATGC 1 cut(s) 414
BsnI GGCC 2 cut(s) 101, 1099
Bsp1286I GDGCHC 1 cut(s) 112
Bsp13I TCCGGA 1 cut(s) 291
Bsp1407I TGTACA 1 cut(s) 1722
Bsp143I GATC 8 cut(s) 190, 535, 610, 617, 625, 1072, 1435, 1756
BspACI CCGC 1 cut(s) 310
BspANI GGCC 2 cut(s) 101, 1099
BspCNI CTCAG 2 cut(s) 33, 1147
BspEI TCCGGA 1 cut(s) 291
BspLI GGNNCC 1 cut(s) 1822
BspPI GGATC 3 cut(s) 185, 625, 633
BspQI GCTCTTC 1 cut(s) 300
BspT107I GGYRCC 1 cut(s) 1820
BspTI CTTAAG 1 cut(s) 910
BsrBI CCGCTC 1 cut(s) 310
BsrFI RCCGGY 2 cut(s) 101, 266
BsrGI TGTACA 1 cut(s) 1722
BsrI ACTGG 2 cut(s) 1174, 1511
BssAI RCCGGY 2 cut(s) 101, 266
BssMI GATC 8 cut(s) 190, 535, 610, 617, 625, 1072, 1435, 1756
BssSI CACGAG 1 cut(s) 1254
Bst2BI CACGAG 1 cut(s) 1254
Bst2UI CCWGG 2 cut(s) 386, 1837
Bst4CI ACNGT 3 cut(s) 1281, 1521, 1557
Bst6I CTCTTC 4 cut(s) 64, 300, 942, 1705
BstAFI CTTAAG 1 cut(s) 910
BstAUI TGTACA 1 cut(s) 1722
BstC8I GCNNGC 4 cut(s) 203, 809, 899, 1035
BstDEI CTNAG 7 cut(s) 20, 392, 629, 1042, 1155, 1223, 1589
BstF5I GGATG 1 cut(s) 1144
BstH2I RGCGCY 1 cut(s) 164
BstHHI GCGC 1 cut(s) 163
BstKTI GATC 8 cut(s) 193, 538, 613, 620, 628, 1075, 1438, 1759
BstMAI GTCTC 3 cut(s) 588, 1224, 1437
BstMBI GATC 8 cut(s) 190, 535, 610, 617, 625, 1072, 1435, 1756
BstMWI GCNNNNNNNGC 1 cut(s) 107
BstNI CCWGG 2 cut(s) 386, 1837
BstNSI RCATGY 3 cut(s) 70, 319, 1201
BstPAI GACNNNNGTC 1 cut(s) 1590
BstSCI CCNGG 2 cut(s) 384, 1835
BstSLI GKGCMC 1 cut(s) 112
BstV1I GCAGC 1 cut(s) 1213
BstX2I RGATCY 2 cut(s) 625, 1435
BstXI CCANNNNNNTGG 2 cut(s) 1333, 1627
BstYI RGATCY 2 cut(s) 625, 1435
Bsu36I CCTNAGG 1 cut(s) 1042
BsuI GTATCC 2 cut(s) 1503, 1504
BsuRI GGCC 2 cut(s) 101, 1099
BtsCI GGATG 1 cut(s) 1144
BtsI GCAGTG 3 cut(s) 127, 731, 1349
BtsIMutI CAGTG 4 cut(s) 127, 731, 1349, 1694
Cac8I GCNNGC 4 cut(s) 203, 809, 899, 1035
CaiI CAGNNNCTG 1 cut(s) 1555
CfoI GCGC 1 cut(s) 163
Cfr10I RCCGGY 2 cut(s) 101, 266
Cfr13I GGNCC 6 cut(s) 264, 286, 388, 1097, 1484, 1521
CpoI CGGWCCG 1 cut(s) 264
CseI GACGC 1 cut(s) 465
Csp6I GTAC 6 cut(s) 75, 764, 1504, 1611, 1723, 1821
CspAI ACCGGT 1 cut(s) 266
CspI CGGWCCG 1 cut(s) 264
CviAII CATG 7 cut(s) 67, 138, 252, 272, 316, 1198, 1260
CviQI GTAC 6 cut(s) 75, 764, 1504, 1611, 1723, 1821
DdeI CTNAG 7 cut(s) 20, 392, 629, 1042, 1155, 1223, 1589
DpnI GATC 8 cut(s) 192, 537, 612, 619, 627, 1074, 1437, 1758
DpnII GATC 8 cut(s) 190, 535, 610, 617, 625, 1072, 1435, 1756
DraI TTTAAA 5 cut(s) 175, 378, 934, 1054, 1659
EaeI YGGCCR 1 cut(s) 99
Eam1104I CTCTTC 4 cut(s) 64, 300, 942, 1705
EarI CTCTTC 4 cut(s) 64, 300, 942, 1705
Eco47I GGWCC 5 cut(s) 264, 286, 388, 1484, 1521
Eco47III AGCGCT 1 cut(s) 162
Eco57I CTGAAG 1 cut(s) 1812
Eco81I CCTNAGG 1 cut(s) 1042
EcoRII CCWGG 2 cut(s) 384, 1835
EcoT22I ATGCAT 1 cut(s) 143
FaeI CATG 7 cut(s) 70, 141, 255, 275, 319, 1201, 1263
FalI AAGNNNNNCTT 2 cut(s) 317, 349
FaqI GGGAC 2 cut(s) 326, 979
FatI CATG 7 cut(s) 66, 137, 251, 271, 315, 1197, 1259
FauI CCCGC 1 cut(s) 303
Fnu4HI GCNGC 1 cut(s) 1202
FokI GGATG 1 cut(s) 1151
Fsp4HI GCNGC 1 cut(s) 1202
FspBI CTAG 3 cut(s) 998, 1289, 1433
GlaI GCGC 1 cut(s) 162
GluI GCNGC 1 cut(s) 1202
GsaI CCCAGC 2 cut(s) 807, 1552
HaeII RGCGCY 1 cut(s) 164
HaeIII GGCC 2 cut(s) 101, 1099
HapII CCGG 4 cut(s) 102, 262, 267, 292
HgaI GACGC 1 cut(s) 465
HhaI GCGC 1 cut(s) 163
Hin1II CATG 7 cut(s) 70, 141, 255, 275, 319, 1201, 1263
Hin6I GCGC 1 cut(s) 161
HinP1I GCGC 1 cut(s) 161
HindIII AAGCTT 1 cut(s) 1067
HinfI GANTC 8 cut(s) 5, 295, 493, 853, 992, 1159, 1212, 1840
HpaII CCGG 4 cut(s) 102, 262, 267, 292
HphI GGTGA 5 cut(s) 8, 289, 814, 1400, 1793
Hpy166II GTNNAC 5 cut(s) 110, 1349, 1538, 1651, 1723
Hpy188I TCNGA 5 cut(s) 617, 778, 1156, 1302, 1442
Hpy188III TCNNGA 9 cut(s) 224, 292, 533, 564, 967, 1076, 1289, 1433, 1628
Hpy8I GTNNAC 5 cut(s) 110, 1349, 1538, 1651, 1723
HpyAV CCTTC 4 cut(s) 50, 204, 510, 684
HpyCH4III ACNGT 3 cut(s) 1281, 1521, 1557
HpyCH4IV ACGT 1 cut(s) 1850
HpyF10VI GCNNNNNNNGC 1 cut(s) 107
HpyF3I CTNAG 7 cut(s) 20, 392, 629, 1042, 1155, 1223, 1589
HpySE526I ACGT 1 cut(s) 1850
Hsp92II CATG 7 cut(s) 70, 141, 255, 275, 319, 1201, 1263
HspAI GCGC 1 cut(s) 161
Kpn2I TCCGGA 1 cut(s) 291
KpnI GGTACC 1 cut(s) 1824
Kzo9I GATC 8 cut(s) 190, 535, 610, 617, 625, 1072, 1435, 1756
LguI GCTCTTC 1 cut(s) 300
LmnI GCTCC 3 cut(s) 439, 1227, 1272
Lsp1109I GCAGC 1 cut(s) 1213
LweI GCATC 3 cut(s) 150, 1116, 1129
MaeI CTAG 3 cut(s) 998, 1289, 1433
MaeII ACGT 1 cut(s) 1850
MaeIII GTNAC 5 cut(s) 221, 687, 1146, 1460, 1592
MalI GATC 8 cut(s) 192, 537, 612, 619, 627, 1074, 1437, 1758
MbiI CCGCTC 1 cut(s) 310
MboI GATC 8 cut(s) 190, 535, 610, 617, 625, 1072, 1435, 1756
MfeI CAATTG 2 cut(s) 646, 1205
MflI RGATCY 2 cut(s) 625, 1435
MhlI GDGCHC 1 cut(s) 112
MlyI GAGTC 2 cut(s) 1001, 1221
MmeI TCCRAC 1 cut(s) 1548
Mph1103I ATGCAT 1 cut(s) 143
MroI TCCGGA 1 cut(s) 291
MroXI GAANNNNTTC 4 cut(s) 327, 717, 857, 1414
MslI CAYNNNNRTG 1 cut(s) 861
MspA1I CMGCKG 1 cut(s) 807
MspCI CTTAAG 1 cut(s) 910
MspI CCGG 4 cut(s) 102, 262, 267, 292
MspR9I CCNGG 2 cut(s) 386, 1837
MunI CAATTG 2 cut(s) 646, 1205
Mva1269I GAATGC 1 cut(s) 414
MvaI CCWGG 2 cut(s) 386, 1837
MwoI GCNNNNNNNGC 1 cut(s) 107
NdeII GATC 8 cut(s) 190, 535, 610, 617, 625, 1072, 1435, 1756
NlaIII CATG 7 cut(s) 70, 141, 255, 275, 319, 1201, 1263
NlaIV GGNNCC 1 cut(s) 1822
NmuCI GTSAC 2 cut(s) 221, 1592
NsiI ATGCAT 1 cut(s) 143
NspI RCATGY 3 cut(s) 70, 319, 1201
PciI ACATGT 1 cut(s) 315
PciSI GCTCTTC 1 cut(s) 300
PctI GAATGC 1 cut(s) 414
PdmI GAANNNNTTC 4 cut(s) 327, 717, 857, 1414
PfeI GAWTC 6 cut(s) 5, 295, 493, 853, 1159, 1840
PfoI TCCNGGA 1 cut(s) 1835
PinAI ACCGGT 1 cut(s) 266
PkrI GCNGC 1 cut(s) 1203
PleI GAGTC 2 cut(s) 1000, 1220
PpsI GAGTC 2 cut(s) 1000, 1220
PscI ACATGT 1 cut(s) 315
PshAI GACNNNNGTC 1 cut(s) 1590
PshBI ATTAAT 1 cut(s) 744
Psp6I CCWGG 2 cut(s) 384, 1835
PspFI CCCAGC 2 cut(s) 803, 1548
PspGI CCWGG 2 cut(s) 384, 1835
PspN4I GGNNCC 1 cut(s) 1822
PspPI GGNCC 6 cut(s) 264, 286, 388, 1097, 1484, 1521
PstNI CAGNNNCTG 1 cut(s) 1555
PsuI RGATCY 2 cut(s) 625, 1435
PvuII CAGCTG 1 cut(s) 807
RsaI GTAC 6 cut(s) 76, 765, 1505, 1612, 1724, 1822
RsaNI GTAC 6 cut(s) 75, 764, 1504, 1611, 1723, 1821
RseI CAYNNNNRTG 1 cut(s) 861
Rsr2I CGGWCCG 1 cut(s) 264
RsrII CGGWCCG 1 cut(s) 264
SapI GCTCTTC 1 cut(s) 300
SatI GCNGC 1 cut(s) 1202
Sau3AI GATC 8 cut(s) 190, 535, 610, 617, 625, 1072, 1435, 1756
Sau96I GGNCC 6 cut(s) 264, 286, 388, 1097, 1484, 1521
ScaI AGTACT 1 cut(s) 76
SchI GAGTC 2 cut(s) 1001, 1221
ScrFI CCNGG 2 cut(s) 386, 1837
SduI GDGCHC 1 cut(s) 112
SfaNI GCATC 3 cut(s) 150, 1116, 1129
SinI GGWCC 5 cut(s) 264, 286, 388, 1484, 1521
SmiI ATTTAAAT 2 cut(s) 378, 1659
SmiMI CAYNNNNRTG 1 cut(s) 861
SmlI CTYRAG 1 cut(s) 910
SmoI CTYRAG 1 cut(s) 910
SsiI CCGC 1 cut(s) 310
SspI AATATT 3 cut(s) 550, 1114, 1321
SspMI CTAG 3 cut(s) 998, 1289, 1433
StyD4I CCNGG 2 cut(s) 384, 1835
SwaI ATTTAAAT 2 cut(s) 378, 1659
TaaI ACNGT 3 cut(s) 1281, 1521, 1557
TaiI ACGT 1 cut(s) 1853
TaqI TCGA 4 cut(s) 144, 968, 1077, 1567
TatI WGTACW 3 cut(s) 74, 1503, 1722
TfiI GAWTC 6 cut(s) 5, 295, 493, 853, 1159, 1840
TscAI CASTG 4 cut(s) 127, 738, 1356, 1701
TseFI GTSAC 2 cut(s) 221, 1592
TseI GCWGC 1 cut(s) 1201
Tsp45I GTSAC 2 cut(s) 221, 1592
TspDTI ATGAA 8 cut(s) 240, 318, 336, 666, 786, 1320, 1565, 1752
TspGWI ACGGA 3 cut(s) 288, 1177, 1486
TspRI CASTG 4 cut(s) 127, 738, 1356, 1701
Vha464I CTTAAG 1 cut(s) 910
VneI GTGCAC 1 cut(s) 108
VpaK11BI GGWCC 5 cut(s) 264, 286, 388, 1484, 1521
VspI ATTAAT 1 cut(s) 744
XapI RAATTY 3 cut(s) 889, 929, 1392
XbaI TCTAGA 2 cut(s) 1288, 1432
XceI RCATGY 3 cut(s) 70, 319, 1201
XmnI GAANNNNTTC 4 cut(s) 327, 717, 857, 1414
XspI CTAG 3 cut(s) 998, 1289, 1433
ZrmI AGTACT 1 cut(s) 76
Zsp2I ATGCAT 1 cut(s) 143
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.