RchiOBHm_Chr2g0143061

LRR receptor-like serine threonine-protein kinase

Basic Information

Type: gene
Biological Identity
rosa_chinensis
2
Physical Location & Seq
Reverse (-)
60775605 .. 60778608
3004 bp
Loading structure...
UTR
Exon/CDS
Intron
PRQ51316

Sequence Viewer

Length: 2946 bp
ATGGGACACAGTACTGCATCGTTCTTGCTTCTTTCACTTTTACTACTGTCAGGAACCTCATACCTTGACACAGTCACACTTGGTTTCTGCAGTGCAGATGCTAATGTGGGTTGCATGGATATCGAGAGGAAAGCCCTTCTGAAGCTCAGAGAGGGACTCGCTGATCCTTCAGACCGGCTTTCATCTTGGGTTGGAGTAGATTGCTGCAAATGGAGAGGTATAGGCTGCAACAAGACAACTGGACGCGTGGACAGCCTTAATCTTCGCAACCCATATGGAGATGTTTCGGAGAGTGATGATGGAACACTCCCTGCTTTAGGAGGTGAGATCAATCCTTCATTGATTGTCTTGAAAGATTTGGTTTACTTGGATTTGAGCATGAATAACTTTGGAGGTCTAGAACTTCCAAGTTTCATTGGATCACTAGAAAAAATAACATATCTCAATCTATCTGGTGCATCATTTGGTGGAGTAATTCCCGCCAATCTTGGAAACCTTTCAAAATTGCTTCATCTTGATCTCAGTAATAATGCTGTTGAGAGTGATCTCAGATGGCTTTCCAGTCTTTCTTACTTACAGTTTCTTAACTTGGGAGGAGCAAACCTTACCAAGGCTGCACCATATTGGCTTCCCACTGTTAATATGCTCCCTTCACTTCTTGAATTGCATTTGCCTGGCTGTGGACTTTCCATCCTTCCACCTACTCTTCCTCATATCAATTTCACATCACTTTTGGTTCTTGACCTCTCTGCCAATGGTTTCAACTCCACACTTTCTCCCTGGTTGTTCAATCTGACTGAACTAGTCAACCTTGACCTAAGTAGGAACAATCTCAATGGAGAACTTCCAGAAACACTCGGGAGTTTGACTCATCTGAAGAACCTTGATTTGTCAGAGAATTCAGACATCGGAGGTCAGTTGCCAAGAAACTTGGGAATGCTATGCAATTTGCAGTCTCTTAAACTTTCAATCAACAAAGTTACTGGTGAGATAACTGAGTTCATTGATAGTTTGTCTATATGCACAAACAGCAGCTTAGAGAGGTTGGATTTAGGTTTTAACCGTCTGACAGGAAATTTGCCTAATTCATTGGGACTTCTTAAGAAGTTAAGATACCTCAAGTTGTGGTCCAACTCATTTCAGGGTTCTATCCCAGAATCTATTGGAAACTTGACATTTTTGGAGGAATTTTATCTTGCAAGAAATAAAATGGGTGGAGTCATCCCAGAAAGTTTTGGGCAGCTCTCATCACTCGTTGCAGTAGATCTCTCTGAAACCACATGGGAAGGTGTTATAACGGAAGCTCATTTTCTAAAACTTCGAAGCTTAAAAGAGGTGGTAATCCAGCAAGCCTCCCAAAACATTTCCCTAGTTTTCAACATTAGTTCTAATTGGATACCTCCTTTCAAATTGAGATACTTGATCCTTGAATCATGTCAATTGGGTCCTAAATTTCCTGCATGGCTTAGAAATCAGACTGAGCTTGTCACGGTGGTCCTCAATAATGCTAAGATTGCAGATACCATACCAGATTGGTTTTGGCAGTTGGATTTGTTATTAGATGAAATAAATGTTGCTTACAATCAACTAGGCGGCAAGTTGCCTAACTCGCTAAGGTTCAGCTATCGTGGTAATGCTGATTTGAGTACAAACCTGTTTGAGGGCCCCCTCCCACTTTGGTCGTCAAATATTACAACGCTCTACCTCAGGGATAATTTGTTTTCAGGGCCAATTCCTTCAAACATTGGTGATGTGATGCCGTCCTTGTTAGAGTTAGACATCTCTAGGAATGGTTTGAGTGGAAGCATTCCCCTGTCTCTAGGTAATCTAAGCCTACTGACAACCATGGTTCTCTCAAATAATTACTTGTCTGGTGAAATTCCTCATTTCTGGAACAGTATACCAAACTTGTATTTGTTAGATATGTCAAACAACAGTCTCTCTGGTACAATTCCAAGATCCATGGATTCTCTTGGTTCACTCTTATTCTTGATTCTCTCTAGTAACAACTTGTCAGGCGAACTTCCTTCACTGAGAAACTGCACTGGCATGAAGAGTCTTGATCTTGGGGAAAATAAGTTCTTTGGAAACATTCCGGCGTGGATAGGAGAAAGCATGCCCTCTCTGTTGATTTTACGCTTGAGTTCCAACTCATTCACCGGAAGCATTCCTTCACAGTTGTGTGGCCTTTCCAATCTTCACATATTGGATCTCTCACAAAATAATCTGTCTGGTCATATTCCCAGCTGTGTTGGTAACTTGAGTGGCTTGAAAACATCTGTATTCTCAGATAAAGATACATCATACCTTTACCAGGGAAAGTTGAAGGTCGTGGCAAGAAGAAGAGTGCAAGACTACGGTTCCACTCTTTATCTTGTTAATAGCCTAGATCTCTCAAACAACAACTTATCAGGTGAGATGCCGAGGGAGCTCACGAGCCTGATAAAGTTGTGGACCTTGAATTTATCCATGAATCATCTGACAGGAGTAATTCCATCAAGGATTGGGAGCATGGTGGGGATAGAATCTCTTGATTTGTCAATAAACCAGCTTTCAGGTTCCATTCCCCAGAGCATGGTTTCATTGACATTCTTGAGTTATCTAAACCTCTCATACAACAAATTGTCTGGGAAAATCCCAACAGGCAACCAGTTTAACACCCTAGTTCCATCAGTATATGAAGGCAATGCCGGTCTTTGTGGTTTTCCGTTGCCTGATTGCCAAGTCAATGGCGGAACTCCTCAGGGTCCAAGTGGAGGTGGAGAAGACACTGGCTTTAAAATGTGGGGTTTCATCATCAGCATGGTGATCGGTTTCGTTATGGGGTTCTGGGGAGTTTGTGGGAGTTTGGTCATTAGCAAGCCTTGGAGGAAGACATATTTCCACTTCACTGACAAAATGATTGTTGCTTGTATACGGAAATATCAGGGGGCACAGGAAATTTAA

Protein Analysis

981

Amino Acids

107.01

Weight (kDa)

5.42

Isoelectric Point (pI)

35.44

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
LRRNT_2 PF08263 42 - 77 1.5e-10 Leucine rich repeat N-terminal domain
LRR_14 PF23598 183 - 339 3e-07 Leucine-rich repeat region
LRR_14 PF23598 345 - 493 8.8e-11 Leucine-rich repeat region
LRR_8 PF13855 369 - 424 6.8e-06 Leucine rich repeat
LRR_8 PF13855 684 - 743 6e-07 Leucine rich repeat
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready

Orthologous Genes (Group: OG0000048)

Species Orthologous Gene IDs
arabidopsis_thaliana AT2G34930
fragaria_vesca FvH4_3g12670 FvH4_3g12672 FvH4_3g12740 FvH4_3g12742 FvH4_3g12770 FvH4_3g12770 FvH4_3g12860 FvH4_3g12890 FvH4_3g13431 FvH4_3g13433 FvH4_3g13435 FvH4_3g13470 FvH4_3g13470 FvH4_3g13480 FvH4_3g13562 FvH4_3g13580 FvH4_3g13600 FvH4_3g13600 FvH4_3g13600 FvH4_3g13600 FvH4_3g13600 FvH4_3g13600 FvH4_3g13610 FvH4_3g13620 FvH4_3g13620 FvH4_3g23240 FvH4_3g32910 FvH4_3g35070 FvH4_3g45520 FvH4_5g08430 FvH4_5g08450 FvH4_6g53230 FvH4_6g53300
malus_domestica MD05G1217600.v1.1 MD05G1217700.v1.1 MD05G1224700.v1.1 MD05G1225100.v1.1 MD05G1225300.v1.1 MD05G1225400.v1.1 MD05G1235900.v1.1 MD05G1236100.v1.1 MD05G1236300.v1.1 MD05G1237200.v1.1 MD05G1241600.v1.1 MD05G1245700.v1.1 MD05G1245800.v1.1 MD05G1245900.v1.1 MD05G1246000.v1.1 MD05G1246100.v1.1 MD05G1246300.v1.1 MD05G1246400.v1.1 MD05G1246500.v1.1 MD05G1248100.v1.1 MD05G1248200.v1.1 MD05G1264300.v1.1 MD05G1275900.v1.1 MD07G1051400.v1.1 MD09G1012600.v1.1 MD09G1012700.v1.1 MD09G1012800.v1.1 MD10G1221400.v1.1 MD10G1221500.v1.1 MD10G1221600.v1.1 MD10G1221900.v1.1 MD10G1222200.v1.1 MD10G1222400.v1.1 MD10G1222500.v1.1 MD10G1222900.v1.1 MD10G1223000.v1.1 MD10G1223100.v1.1 MD10G1223500.v1.1 MD10G1228000.v1.1 MD12G1019600.v1.1 MD12G1020000.v1.1 MD12G1020100.v1.1 MD17G1013200.v1.1 MD17G1013300.v1.1 MD17G1013400.v1.1
prunus_persica Prupe.1G060500_v2.0.a1 Prupe.1G100100_v2.0.a1 Prupe.3G124000_v2.0.a1 Prupe.3G304400_v2.0.a1 Prupe.4G116800_v2.0.a1 Prupe.4G116900_v2.0.a1 Prupe.4G117000_v2.0.a1 Prupe.4G121800_v2.0.a1 Prupe.4G121900_v2.0.a1 Prupe.4G122000_v2.0.a1 Prupe.4G122100_v2.0.a1 Prupe.4G122200_v2.0.a1 Prupe.4G122300_v2.0.a1 Prupe.4G122500_v2.0.a1 Prupe.4G122600_v2.0.a1 Prupe.4G122800_v2.0.a1 Prupe.4G122900_v2.0.a1 Prupe.4G123000_v2.0.a1 Prupe.4G123100_v2.0.a1 Prupe.4G123200_v2.0.a1 Prupe.4G131500_v2.0.a1 Prupe.4G131600_v2.0.a1 Prupe.7G032500_v2.0.a1 Prupe.7G032900_v2.0.a1 Prupe.7G033000_v2.0.a1 Prupe.7G033100_v2.0.a1 Prupe.7G033300_v2.0.a1 Prupe.7G033600_v2.0.a1 Prupe.7G034600_v2.0.a1 Prupe.7G040200_v2.0.a1 Prupe.7G059200_v2.0.a1
pyrus_communis pycom05g20580 pycom05g20590 pycom05g20760 pycom05g20800 pycom05g21280 pycom05g21290 pycom05g21820 pycom05g21830 pycom05g22180 pycom05g22190 pycom05g22210 pycom05g22450 pycom05g22460 pycom05g22470 pycom05g22480 pycom05g22490 pycom05g23770 pycom05g23780 pycom05g24050 pycom05g24060 pycom07g03910 pycom10g18700 pycom10g18720 pycom10g18730 pycom10g18740 pycom10g19150 pycom111g01060 pycom12g01660 pycom12g01690 pycom12g01720 pycom12g01740 pycom12g01750 pycom12g01770 pycom12g01810 pycom12g01820 pycom12g01830 pycom12g01840 pycom12g01870 pycom12g01900 pycom17g01060 pycom17g01070
rosa_chinensis RchiOBHm_Chr1g0315041 RchiOBHm_Chr1g0315051 RchiOBHm_Chr1g0315071 RchiOBHm_Chr1g0315161 RchiOBHm_Chr1g0315211 RchiOBHm_Chr1g0315251 RchiOBHm_Chr1g0315321 RchiOBHm_Chr1g0315391 RchiOBHm_Chr1g0315451 RchiOBHm_Chr1g0315481 RchiOBHm_Chr1g0315551 RchiOBHm_Chr1g0315601 RchiOBHm_Chr1g0315621 RchiOBHm_Chr1g0359221 RchiOBHm_Chr2g0142981 RchiOBHm_Chr2g0143001 RchiOBHm_Chr2g0143061 RchiOBHm_Chr2g0143091 RchiOBHm_Chr2g0175321 RchiOBHm_Chr2g0175341 RchiOBHm_Chr2g0175361 RchiOBHm_Chr2g0175371 RchiOBHm_Chr3g0470491 RchiOBHm_Chr3g0480881 RchiOBHm_Chr3g0485511 RchiOBHm_Chr5g0020741 RchiOBHm_Chr5g0020901 RchiOBHm_Chr5g0020931 RchiOBHm_Chr5g0020941 RchiOBHm_Chr5g0020961 RchiOBHm_Chr5g0020971 RchiOBHm_Chr5g0021451 RchiOBHm_Chr5g0021531 RchiOBHm_Chr5g0021831 RchiOBHm_Chr5g0021841 RchiOBHm_Chr5g0021931 RchiOBHm_Chr5g0021941 RchiOBHm_Chr5g0021981 RchiOBHm_Chr5g0021991 RchiOBHm_Chr5g0022011 RchiOBHm_Chr5g0022181 RchiOBHm_Chr5g0022191 RchiOBHm_Chr5g0022211 RchiOBHm_Chr5g0022221 RchiOBHm_Chr5g0022231 RchiOBHm_Chr5g0022291 RchiOBHm_Chr5g0022301 RchiOBHm_Chr5g0022331 RchiOBHm_Chr5g0022361 RchiOBHm_Chr5g0022371 RchiOBHm_Chr5g0022381 RchiOBHm_Chr5g0022401 RchiOBHm_Chr5g0022431 RchiOBHm_Chr5g0022451 RchiOBHm_Chr5g0022541 RchiOBHm_Chr5g0022591 RchiOBHm_Chr5g0022601 RchiOBHm_Chr5g0022701 RchiOBHm_Chr5g0022741 RchiOBHm_Chr5g0022791 RchiOBHm_Chr5g0022811 RchiOBHm_Chr5g0022851 RchiOBHm_Chr5g0029441 RchiOBHm_Chr5g0041631 RchiOBHm_Chr5g0069391 RchiOBHm_Chr6g0273811 RchiOBHm_Chr6g0273831 RchiOBHm_Chr6g0275331 RchiOBHm_Chr7g0219061
rosa_laevigata RLG00000002463 RLG00000020007 RLG00000020008 RLG00000022320 RLG00000022321 RLG00000023446 RLG00000030742 RLG00000030743 RLG00000030747 RLG00000032557 RLG00000032564 RLG00000032571 RLG00000032573 RLG00000032574 RLG00000032612 RLG00000032633 RLG00000032636 RLG00000032638 RLG00000032650 RLG00000032651 RLG00000032652 RLG00000032653 RLG00000032655 RLG00000032673 RLG00000032678 RLG00000032769 RLG00000032857 RLG00000033168 RLG00000033465 RLG00000034086 RLG00000034222 RLG00000035290
rosa_multiflora Rmu_co8143358.1_g000001 Rmu_co8518791.1_g000001 Rmu_sc0000178.1_g000008 Rmu_sc0000178.1_g000014 Rmu_sc0000401.1_g000005 Rmu_sc0000401.1_g000013 Rmu_sc0000401.1_g000017 Rmu_sc0000401.1_g000018 Rmu_sc0000401.1_g000024 Rmu_sc0000401.1_g000025 Rmu_sc0000576.1_g000020 Rmu_sc0001585.1_g000003 Rmu_sc0001585.1_g000005 Rmu_sc0001585.1_g000008 Rmu_sc0001784.1_g000006 Rmu_sc0001784.1_g000011 Rmu_sc0001784.1_g000022 Rmu_sc0001784.1_g000028 Rmu_sc0002052.1_g000004 Rmu_sc0002052.1_g000011 Rmu_sc0002277.1_g000003 Rmu_sc0002277.1_g000006 Rmu_sc0002277.1_g000024 Rmu_sc0002658.1_g000012 Rmu_sc0003512.1_g000004 Rmu_sc0003512.1_g000007 Rmu_sc0004180.1_g000016 Rmu_sc0004180.1_g000029 Rmu_sc0004180.1_g000034 Rmu_sc0005639.1_g000008 Rmu_sc0005639.1_g000023 Rmu_sc0006070.1_g000016 Rmu_sc0006070.1_g000017 Rmu_sc0006966.1_g000021 Rmu_sc0006966.1_g000023 Rmu_sc0007239.1_g000003 Rmu_sc0008460.1_g000010 Rmu_sc0009984.1_g000008 Rmu_sc0010181.1_g000005 Rmu_sc0010181.1_g000010 Rmu_sc0010503.1_g000006 Rmu_sc0011646.1_g000003 Rmu_sc0012984.1_g000011 Rmu_sc0016972.1_g000005 Rmu_sc0016972.1_g000008 Rmu_sc0023070.1_g000003 Rmu_sc0025660.1_g000001 Rmu_ssc0000322.1_g000019
rosa_roxburghii Rroxscaffold_1G00038860 Rroxscaffold_1G00053490 Rroxscaffold_1G00053500 Rroxscaffold_1G00054230 Rroxscaffold_1G00056460 Rroxscaffold_1G00056470 Rroxscaffold_1G00056480 Rroxscaffold_1G00056500 Rroxscaffold_1G00056510 Rroxscaffold_1G00056620 Rroxscaffold_1G00056690 Rroxscaffold_1G00056710 Rroxscaffold_1G00056720 Rroxscaffold_1G00056730 Rroxscaffold_1G00056740 Rroxscaffold_1G00056750 Rroxscaffold_1G00056760 Rroxscaffold_1G00056870 Rroxscaffold_1G00056900 Rroxscaffold_1G00057120 Rroxscaffold_1G00057560 Rroxscaffold_2G00077430 Rroxscaffold_2G00102160 Rroxscaffold_3G00231420 Rroxscaffold_3G00231430 Rroxscaffold_4G00297230 Rroxscaffold_4G00331570 Rroxscaffold_6G00396700 Rroxscaffold_6G00400940 Rroxscaffold_7G00192740
rosa_rugosa Rorug01G0004400 Rorug01G0004500 Rorug02G0377600 Rorug02G0378000 Rorug02G0582800 Rorug02G0583400 Rorug03G0187000 Rorug03G0218800 Rorug04G0081200 Rorug05G0062700 Rorug05G0062700 Rorug05G0063100 Rorug05G0063200 Rorug05G0063200 Rorug05G0063200 Rorug05G0067000 Rorug05G0069700 Rorug05G0069900 Rorug05G0070000 Rorug05G0070100 Rorug05G0070300 Rorug05G0070400 Rorug05G0070600 Rorug05G0070600 Rorug05G0072300 Rorug05G0072400 Rorug05G0072500 Rorug05G0072500 Rorug05G0072600.1 Rorug05G0072700 Rorug05G0072800 Rorug05G0072800 Rorug05G0072900 Rorug05G0073000 Rorug05G0073000 Rorug05G0073400 Rorug05G0073400 Rorug05G0073400 Rorug05G0074800 Rorug05G0075000 Rorug05G0114300 Rorug05G0194200 Rorug06G0097800
rosa_samantha Rh2AG401400 Rh2CG387600 Rh2CG417000 Rh2CG637400 Rh5CG169600 Rh5CG172100 Rh5CG175200 Rh5CG317100 Rh6DG187900
rosa_wichuraiana Rw1G000750 Rw1G000790 Rw1G000820 Rw1G000860 Rw1G000880 Rw1G000910 Rw2G035180 Rw2G035200 Rw2G035240 Rw2G054370 Rw2G054380 Rw5G013570 Rw5G013580 Rw5G013590 Rw5G013910 Rw5G013980 Rw5G014110 Rw5G014120 Rw5G014280 Rw5G014310 Rw5G014400 Rw5G014420 Rw5G014440 Rw5G014460 Rw5G014480 Rw5G014500 Rw5G014520 Rw5G014530 Rw5G042390

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 1 cut(s) 1295
AccB7I CCANNNNNTGG 1 cut(s) 2575
AccI GTMKAC 2 cut(s) 1900, 2914
AccII CGCG 1 cut(s) 246
AciI CCGC 3 cut(s) 480, 1593, 2733
AclWI GGATC 5 cut(s) 158, 427, 1417, 1953, 2217
AcsI RAATTY 7 cut(s) 898, 1075, 1187, 1451, 1878, 2461, 2940
AcuI CTGAAG 3 cut(s) 153, 161, 896
AfaI GTAC 3 cut(s) 13, 1648, 1948
AfiI CCNNNNNNNGG 7 cut(s) 317, 610, 680, 1660, 2314, 2575, 2756
AflII CTTAAG 1 cut(s) 1100
AflIII ACRYGT 1 cut(s) 244
AhlI ACTAGT 1 cut(s) 802
AjnI CCWGG 3 cut(s) 673, 779, 2313
AleI CACNNNNGTG 1 cut(s) 2179
AloI GAACNNNNNNTCC 2 cut(s) 2063, 2095
Alw21I GWGCWC 1 cut(s) 2433
Alw26I GTCTC 3 cut(s) 960, 1821, 1943
AlwI GGATC 5 cut(s) 158, 427, 1417, 1953, 2217
Ama87I CYCGRG 1 cut(s) 857
AoxI GGCC 3 cut(s) 1663, 1727, 2185
ApaI GGGCCC 1 cut(s) 1667
ApeKI GCWGC 5 cut(s) 204, 225, 614, 1032, 1240
ApoI RAATTY 7 cut(s) 898, 1075, 1187, 1451, 1878, 2461, 2940
ArsI GACNNNNNNTTYG 2 cut(s) 1060, 1092
Asp700I GAANNNNTTC 1 cut(s) 496
AspS9I GGNCC 8 cut(s) 1128, 1445, 1495, 1663, 1664, 1727, 2454, 2747
AsuHPI GGTGA 7 cut(s) 335, 998, 1760, 1886, 2149, 2426, 2818
AsuII TTCGAA 1 cut(s) 1321
AvaI CYCGRG 1 cut(s) 857
AvaII GGWCC 5 cut(s) 1128, 1445, 1495, 2454, 2747
AxyI CCTNAGG 2 cut(s) 1706, 2742
BaeGI GKGCMC 2 cut(s) 1667, 2935
BanII GRGCYC 2 cut(s) 1667, 2433
BarI GAAGNNNNNNTAC 2 cut(s) 1097, 1129
BauI CACGAG 1 cut(s) 2434
BbsI GAAGAC 2 cut(s) 2772, 2879
Bbv12I GWGCWC 1 cut(s) 2433
BbvI GCAGC 5 cut(s) 191, 212, 601, 1044, 1252
BccI CCATC 5 cut(s) 293, 546, 698, 2503, 2677
BceAI ACGGC 1 cut(s) 1744
BcgI CGANNNNNNTGC 4 cut(s) 103, 137, 2791, 2825
BciT130I CCWGG 3 cut(s) 675, 781, 2315
BciVI GTATCC 1 cut(s) 1389
BcoDI GTCTC 3 cut(s) 960, 1821, 1943
BcuI ACTAGT 1 cut(s) 802
BfmI CTRYAG 1 cut(s) 88
BfrI CTTAAG 1 cut(s) 1100
BfuI GTATCC 1 cut(s) 1389
BglII AGATCT 2 cut(s) 1264, 2389
BisI GCNGC 6 cut(s) 205, 226, 615, 1033, 1241, 1594
BlsI GCNGC 6 cut(s) 206, 227, 616, 1034, 1242, 1595
BmcAI AGTACT 1 cut(s) 13
Bme1390I CCNGG 3 cut(s) 675, 781, 2315
Bme18I GGWCC 5 cut(s) 1128, 1445, 1495, 2454, 2747
BmeT110I CYCGRG 1 cut(s) 857
BmgT120I GGNCC 8 cut(s) 1128, 1445, 1495, 1663, 1664, 1727, 2454, 2747
BmiI GGNNCC 7 cut(s) 55, 1446, 1665, 1666, 2362, 2560, 2748
BmrFI CCNGG 3 cut(s) 675, 781, 2315
BmsI GCATC 5 cut(s) 26, 88, 467, 1746, 2409
BpiI GAAGAC 2 cut(s) 2772, 2879
BplI GAGNNNNNCTC 4 cut(s) 141, 173, 853, 885
Bpu10I CCTNAGC 1 cut(s) 1613
Bpu14I TTCGAA 1 cut(s) 1321
BpuEI CTTGAG 4 cut(s) 1103, 2161, 2281, 2614
BsaJI CCNNGG 7 cut(s) 609, 779, 1845, 1962, 2314, 2423, 2864
BsaWI WCCGGW 1 cut(s) 2159
BsaXI ACNNNNNCTCC 2 cut(s) 760, 790
Bsc4I CCNNNNNNNGG 7 cut(s) 317, 610, 680, 1660, 2314, 2575, 2756
Bse118I RCCGGY 2 cut(s) 174, 2690
Bse1I ACTGG 6 cut(s) 244, 561, 988, 2050, 2650, 2776
Bse21I CCTNAGG 2 cut(s) 1706, 2742
Bse3DI GCAATG 1 cut(s) 2692
BseBI CCWGG 3 cut(s) 675, 781, 2315
BseDI CCNNGG 7 cut(s) 609, 779, 1845, 1962, 2314, 2423, 2864
BseGI GGATG 2 cut(s) 690, 1221
BseLI CCNNNNNNNGG 7 cut(s) 317, 610, 680, 1660, 2314, 2575, 2756
BseMI GCAATG 1 cut(s) 2692
BseMII CTCAG 9 cut(s) 160, 535, 562, 987, 1470, 1720, 2024, 2301, 2756
BseNI ACTGG 6 cut(s) 244, 561, 988, 2050, 2650, 2776
BseRI GAGGAG 2 cut(s) 609, 2730
BseSI GKGCMC 2 cut(s) 1667, 2935
BseXI GCAGC 5 cut(s) 191, 212, 601, 1044, 1252
BseYI CCCAGC 1 cut(s) 2243
BsgI GTGCAG 3 cut(s) 114, 600, 2026
Bsh1236I CGCG 1 cut(s) 246
BshFI GGCC 3 cut(s) 1665, 1729, 2187
BsiHKAI GWGCWC 1 cut(s) 2433
BsiHKCI CYCGRG 1 cut(s) 857
BsiSI CCGG 4 cut(s) 175, 2096, 2160, 2691
BslFI GGGAC 3 cut(s) 18, 168, 1107
BslI CCNNNNNNNGG 7 cut(s) 317, 610, 680, 1660, 2314, 2575, 2756
BsmAI GTCTC 3 cut(s) 960, 1821, 1943
BsmFI GGGAC 3 cut(s) 18, 168, 1107
BsmI GAATGC 3 cut(s) 942, 1806, 2166
BsnI GGCC 3 cut(s) 1665, 1729, 2187
BsoBI CYCGRG 1 cut(s) 857
Bsp119I TTCGAA 1 cut(s) 1321
Bsp120I GGGCCC 1 cut(s) 1663
Bsp1286I GDGCHC 3 cut(s) 1667, 2433, 2935
Bsp19I CCATGG 2 cut(s) 1845, 1962
BspACI CCGC 3 cut(s) 480, 1593, 2733
BspANI GGCC 3 cut(s) 1665, 1729, 2187
BspCNI CTCAG 9 cut(s) 159, 534, 561, 988, 1471, 1719, 2025, 2300, 2755
BspFNI CGCG 1 cut(s) 246
BspLI GGNNCC 7 cut(s) 55, 1446, 1665, 1666, 2362, 2560, 2748
BspMAI CTGCAG 1 cut(s) 92
BspPI GGATC 5 cut(s) 158, 427, 1417, 1953, 2217
BspT104I TTCGAA 1 cut(s) 1321
BspTI CTTAAG 1 cut(s) 1100
BsrDI GCAATG 1 cut(s) 2692
BsrFI RCCGGY 2 cut(s) 174, 2690
BsrI ACTGG 6 cut(s) 244, 561, 988, 2050, 2650, 2776
BssAI RCCGGY 2 cut(s) 174, 2690
BssECI CCNNGG 7 cut(s) 609, 779, 1845, 1962, 2314, 2423, 2864
BssNAI GTATAC 2 cut(s) 1901, 2915
BssSI CACGAG 1 cut(s) 2434
BssT1I CCWWGG 4 cut(s) 609, 1845, 1962, 2864
Bst1107I GTATAC 2 cut(s) 1901, 2915
Bst2BI CACGAG 1 cut(s) 2434
Bst2UI CCWGG 3 cut(s) 675, 781, 2315
Bst6I CTCTTC 3 cut(s) 711, 2048, 2338
BstAFI CTTAAG 1 cut(s) 1100
BstBI TTCGAA 1 cut(s) 1321
BstC8I GCNNGC 3 cut(s) 1350, 2117, 2861
BstDSI CCRYGG 2 cut(s) 1845, 1962
BstENI CCTNNNNNAGG 4 cut(s) 315, 608, 1658, 2312
BstF5I GGATG 2 cut(s) 690, 1221
BstFNI CGCG 1 cut(s) 246
BstMAI GTCTC 3 cut(s) 960, 1821, 1943
BstMWI GCNNNNNNNGC 5 cut(s) 252, 1029, 1514, 1609, 2428
BstNI CCWGG 3 cut(s) 675, 781, 2315
BstNSI RCATGY 1 cut(s) 2119
BstSCI CCNGG 3 cut(s) 673, 779, 2313
BstSFI CTRYAG 1 cut(s) 88
BstSLI GKGCMC 2 cut(s) 1667, 2935
BstUI CGCG 1 cut(s) 246
BstV1I GCAGC 5 cut(s) 191, 212, 601, 1044, 1252
BstV2I GAAGAC 2 cut(s) 2772, 2879
BstX2I RGATCY 4 cut(s) 1264, 1958, 2209, 2389
BstXI CCANNNNNNTGG 1 cut(s) 2729
BstYI RGATCY 4 cut(s) 1264, 1958, 2209, 2389
BstZ17I GTATAC 2 cut(s) 1901, 2915
Bsu36I CCTNAGG 2 cut(s) 1706, 2742
BsuI GTATCC 1 cut(s) 1389
BsuRI GGCC 3 cut(s) 1665, 1729, 2187
BtgI CCRYGG 2 cut(s) 1845, 1962
BtsCI GGATG 2 cut(s) 690, 1221
BtsI GCAGTG 1 cut(s) 97
BtsIMutI CAGTG 6 cut(s) 97, 633, 2030, 2043, 2769, 2889
Cac8I GCNNGC 3 cut(s) 1350, 2117, 2861
Cfr10I RCCGGY 2 cut(s) 174, 2690
Cfr13I GGNCC 8 cut(s) 1128, 1445, 1495, 1663, 1664, 1727, 2454, 2747
CseI GACGC 1 cut(s) 252
Csp6I GTAC 3 cut(s) 12, 1647, 1947
CviQI GTAC 3 cut(s) 12, 1647, 1947
DraI TTTAAA 1 cut(s) 2779
Eam1104I CTCTTC 3 cut(s) 711, 2048, 2338
EarI CTCTTC 3 cut(s) 711, 2048, 2338
EciI GGCGGA 1 cut(s) 2748
Ecl136II GAGCTC 1 cut(s) 2431
Eco130I CCWWGG 4 cut(s) 609, 1845, 1962, 2864
Eco24I GRGCYC 2 cut(s) 1667, 2433
Eco32I GATATC 1 cut(s) 121
Eco47I GGWCC 5 cut(s) 1128, 1445, 1495, 2454, 2747
Eco53kI GAGCTC 1 cut(s) 2431
Eco57I CTGAAG 3 cut(s) 153, 161, 896
Eco81I CCTNAGG 2 cut(s) 1706, 2742
Eco88I CYCGRG 1 cut(s) 857
EcoICRI GAGCTC 1 cut(s) 2431
EcoNI CCTNNNNNAGG 4 cut(s) 315, 608, 1658, 2312
EcoO109I RGGNCCY 3 cut(s) 1445, 1663, 1664
EcoRI GAATTC 1 cut(s) 898
EcoRII CCWGG 3 cut(s) 673, 779, 2313
EcoRV GATATC 1 cut(s) 121
EcoT14I CCWWGG 4 cut(s) 609, 1845, 1962, 2864
EcoT38I GRGCYC 2 cut(s) 1667, 2433
ErhI CCWWGG 4 cut(s) 609, 1845, 1962, 2864
FalI AAGNNNNNCTT 2 cut(s) 2155, 2187
FaqI GGGAC 3 cut(s) 18, 168, 1107
FauI CCCGC 1 cut(s) 487
FauNDI CATATG 1 cut(s) 274
FblI GTMKAC 2 cut(s) 1900, 2914
Fnu4HI GCNGC 6 cut(s) 205, 226, 615, 1033, 1241, 1594
FokI GGATG 2 cut(s) 677, 1208
FriOI GRGCYC 2 cut(s) 1667, 2433
Fsp4HI GCNGC 6 cut(s) 205, 226, 615, 1033, 1241, 1594
GluI GCNGC 6 cut(s) 205, 226, 615, 1033, 1241, 1594
GsaI CCCAGC 1 cut(s) 2247
HaeIII GGCC 3 cut(s) 1665, 1729, 2187
HapII CCGG 4 cut(s) 175, 2096, 2160, 2691
HgaI GACGC 1 cut(s) 252
HincII GTYRAC 1 cut(s) 808
HindII GTYRAC 1 cut(s) 808
HindIII AAGCTT 1 cut(s) 1324
HpaII CCGG 4 cut(s) 175, 2096, 2160, 2691
HphI GGTGA 7 cut(s) 335, 998, 1760, 1886, 2149, 2426, 2818
Hpy166II GTNNAC 8 cut(s) 250, 364, 683, 808, 1901, 1979, 2454, 2915
Hpy8I GTNNAC 8 cut(s) 250, 364, 683, 808, 1901, 1979, 2454, 2915
HpyF10VI GCNNNNNNNGC 5 cut(s) 252, 1029, 1514, 1609, 2428
LmnI GCTCC 4 cut(s) 596, 651, 2428, 2508
Lsp1109I GCAGC 5 cut(s) 191, 212, 601, 1044, 1252
LweI GCATC 5 cut(s) 26, 88, 467, 1746, 2409
MaeIII GTNAC 5 cut(s) 73, 979, 1486, 2003, 2255
MboII GAAGA 9 cut(s) 254, 698, 889, 2065, 2189, 2352, 2355, 2777, 2884
MfeI CAATTG 1 cut(s) 1439
MflI RGATCY 4 cut(s) 1264, 1958, 2209, 2389
MhlI GDGCHC 3 cut(s) 1667, 2433, 2935
MluI ACGCGT 1 cut(s) 244
MlyI GAGTC 4 cut(s) 150, 862, 1227, 2065
MmeI TCCRAC 5 cut(s) 172, 1026, 1155, 1527, 2172
MroXI GAANNNNTTC 1 cut(s) 496
MslI CAYNNNNRTG 3 cut(s) 2048, 2179, 2801
MspA1I CMGCKG 1 cut(s) 2247
MspCI CTTAAG 1 cut(s) 1100
MspI CCGG 4 cut(s) 175, 2096, 2160, 2691
MspR9I CCNGG 3 cut(s) 675, 781, 2315
MunI CAATTG 1 cut(s) 1439
Mva1269I GAATGC 3 cut(s) 942, 1806, 2166
MvaI CCWGG 3 cut(s) 675, 781, 2315
MvnI CGCG 1 cut(s) 246
MwoI GCNNNNNNNGC 5 cut(s) 252, 1029, 1514, 1609, 2428
NcoI CCATGG 2 cut(s) 1845, 1962
NdeI CATATG 1 cut(s) 274
NlaIV GGNNCC 7 cut(s) 55, 1446, 1665, 1666, 2362, 2560, 2748
NmeAIII GCCGAG 1 cut(s) 2448
NmuCI GTSAC 2 cut(s) 73, 1486
NspI RCATGY 1 cut(s) 2119
NspV TTCGAA 1 cut(s) 1321
OliI CACNNNNGTG 1 cut(s) 2179
PaeI GCATGC 1 cut(s) 2119
PctI GAATGC 3 cut(s) 942, 1806, 2166
PdmI GAANNNNTTC 1 cut(s) 496
PfeI GAWTC 6 cut(s) 1157, 1430, 1967, 1993, 2473, 2525
PflFI GACNNNGTC 1 cut(s) 71
PflMI CCANNNNNTGG 1 cut(s) 2575
PkrI GCNGC 6 cut(s) 206, 227, 616, 1034, 1242, 1595
PleI GAGTC 4 cut(s) 150, 862, 1226, 2064
PpsI GAGTC 4 cut(s) 150, 862, 1226, 2064
PpuMI RGGWCCY 1 cut(s) 1445
PsiI TTATAA 1 cut(s) 1295
Psp124BI GAGCTC 1 cut(s) 2433
Psp5II RGGWCCY 1 cut(s) 1445
Psp6I CCWGG 3 cut(s) 673, 779, 2313
PspFI CCCAGC 1 cut(s) 2243
PspGI CCWGG 3 cut(s) 673, 779, 2313
PspN4I GGNNCC 7 cut(s) 55, 1446, 1665, 1666, 2362, 2560, 2748
PspOMI GGGCCC 1 cut(s) 1663
PspPI GGNCC 8 cut(s) 1128, 1445, 1495, 1663, 1664, 1727, 2454, 2747
PspPPI RGGWCCY 1 cut(s) 1445
PstI CTGCAG 1 cut(s) 92
PsuI RGATCY 4 cut(s) 1264, 1958, 2209, 2389
PsyI GACNNNGTC 1 cut(s) 71
PvuII CAGCTG 1 cut(s) 2247
RsaI GTAC 3 cut(s) 13, 1648, 1948
RsaNI GTAC 3 cut(s) 12, 1647, 1947
RseI CAYNNNNRTG 3 cut(s) 2048, 2179, 2801
SacI GAGCTC 1 cut(s) 2433
SatI GCNGC 6 cut(s) 205, 226, 615, 1033, 1241, 1594
Sau96I GGNCC 8 cut(s) 1128, 1445, 1495, 1663, 1664, 1727, 2454, 2747
ScaI AGTACT 1 cut(s) 13
SchI GAGTC 4 cut(s) 150, 862, 1227, 2065
ScrFI CCNGG 3 cut(s) 675, 781, 2315
SduI GDGCHC 3 cut(s) 1667, 2433, 2935
SfaNI GCATC 5 cut(s) 26, 88, 467, 1746, 2409
SfcI CTRYAG 1 cut(s) 88
SfuI TTCGAA 1 cut(s) 1321
SinI GGWCC 5 cut(s) 1128, 1445, 1495, 2454, 2747
SmiMI CAYNNNNRTG 3 cut(s) 2048, 2179, 2801
SmlI CTYRAG 5 cut(s) 1100, 1118, 2140, 2260, 2593
SmoI CTYRAG 5 cut(s) 1100, 1118, 2140, 2260, 2593
SpeI ACTAGT 1 cut(s) 802
SphI GCATGC 1 cut(s) 2119
SsiI CCGC 3 cut(s) 480, 1593, 2733
SspI AATATT 1 cut(s) 1690
SstI GAGCTC 1 cut(s) 2433
StyD4I CCNGG 3 cut(s) 673, 779, 2313
StyI CCWWGG 4 cut(s) 609, 1845, 1962, 2864
TaqI TCGA 2 cut(s) 123, 1321
TatI WGTACW 2 cut(s) 11, 1646
TauI GCSGC 1 cut(s) 1596
TfiI GAWTC 6 cut(s) 1157, 1430, 1967, 1993, 2473, 2525
TscAI CASTG 6 cut(s) 97, 640, 2037, 2050, 2776, 2896
TseFI GTSAC 2 cut(s) 73, 1486
TseI GCWGC 5 cut(s) 204, 225, 614, 1032, 1240
Tsp45I GTSAC 2 cut(s) 73, 1486
TspGWI ACGGA 3 cut(s) 1313, 2697, 2932
TspRI CASTG 6 cut(s) 97, 640, 2037, 2050, 2776, 2896
Tth111I GACNNNGTC 1 cut(s) 71
Van91I CCANNNNNTGG 1 cut(s) 2575
Vha464I CTTAAG 1 cut(s) 1100
VpaK11BI GGWCC 5 cut(s) 1128, 1445, 1495, 2454, 2747
XagI CCTNNNNNAGG 4 cut(s) 315, 608, 1658, 2312
XapI RAATTY 7 cut(s) 898, 1075, 1187, 1451, 1878, 2461, 2940
XbaI TCTAGA 1 cut(s) 397
XceI RCATGY 1 cut(s) 2119
XcmI CCANNNNNNNNNTGG 1 cut(s) 1536
XmiI GTMKAC 2 cut(s) 1900, 2914
XmnI GAANNNNTTC 1 cut(s) 496
ZrmI AGTACT 1 cut(s) 13
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.