Rroxscaffold_6G00400940

LRR receptor-like serine threonine-protein kinase

Basic Information

Type: gene
Biological Identity
rosa_roxburghii
GWHEROQ00000006
Physical Location & Seq
Reverse (-)
23182257 .. 23185548
3292 bp
Loading structure...
UTR
Exon/CDS
Intron
Rroxscaffold_6G00400940.1

Sequence Viewer

Length: 1599 bp
ATGAGTACCTTTGATTTTATGCCCAAAGCGAGTGGAGACTCGAACAGAGGACATACGTCACTCATTTTCAATGTTACTTATGAGTGGGTTCCCCCTTTCAAGCTTCACACAATTTACATTGACAATTGTCAAGTAGGTCCTAGCTTCGGTGTATGGCTTCAATCTCAAACTCAGTTATCAGAAGTCACCCTTACTAGTACTGGAATCTCTGGCACATTACCAGAGGCATGGCTCTTGAAGATATCTTCCCAAGTTGAATATTTAGATTTATCTAACAATCAACTCTCTGGAAAGCTTCCGTTCCAATTCATATTTCGAAAATTATATCACATAGATTTGAGTCATAACCAATTCAAGGGCCAACTCCAGCTTTGGTCCAGTAATGCTCCCCTATTACTTGAAATGTACCTTTCCGATAATCTTTTGAAAGGTCCTATTCCACCCTCTATTTGTAGCATGCAATATATGCGCATCCTGTCCCTCAGAAACAATCAATTATCTGGAGAATTCCCTGAGGCATGGAGCTTGTGGAGCAAAATAGTCGTTGTAGATGTGGCAAACAATAATCTCTCTGGTCATATTCCAAGTTCCATGGGTATCCCAAGCTCTCTTGCAATATTGAAGATGAACAACAATAATTTTAGTGGCAAAATTCCTTCTTCCTTGCAAAATTGCTCTGGGTTGTGGAGACTTGATCTTGGAGGCAACAAATTTACGGGAAACCTACCGTTTTGGTTAGGATCTGAAGTATCTGGGTTGGAAATGCTACAGTTGCGATCCAACTTTTTAAGTGGCCATATTCCTCAACAATTGTGCAATCTTCCCAATCTTCAGATCCTTGACCTTGGTCACAACAACTTTTCAGGGACTATTCCCAAGTGTTTGAGTAGGTTGACATCACTGGTGAATGCTAAAGATTATACTCTTTCGGCATACTTCGTGGGTTATCCTGAAGAAACAACAGTTATATCCAAAGGACGAGAACTCGAATATGGAATTCCCAATTTGGATTTGGTAAAGAGTATTGATCTCTCATCGAATCAGTTGAAAGGTGATATTCCTGAAGCAATAACCAACCTCATTGGATTGGGTATCCTGAACTTGTCAAGGAATCAATTAAATGGAAACATTCCCTCCAAGATAGGCAACTTGCATTGGCTGGAAACTCTTGACCTTTCTCACAATCACCTTTCAGGGAGAATTCCTCAGAGCTTTTCTTCTTTGACCTCACTGTCTCACTTGAACTTGTCTTATAACAACTTGACAGGAAGAATTCCTTCGGGAAACCAACTCCAAACACTTGAAGATTCATCCATATATGAGGGGAATCCGTCACTGTGCGGGGTTCCTCTTTCTGATTGCCCAGGAGATGACAGACCGATTTCTCCAGAAGATGATAAAGATGAAGATGATTATGGAAGGCTTGGCTTATATGTCAGCATTGTGCTCGGATTCTCTGTTGGCTTTTGGGGTGTTTGTGGTACTTTAATCATAAAGAAGTCATGGAGGTATGCCTATTTTAAATTCTTTGGCAACATCAAAGATAAGGCAACGCTAGCAATTGCTGTGAGAGTAGCACGTTTGCAAAGGAAAATTTGA

Protein Analysis

532

Amino Acids

59.04

Weight (kDa)

6.6

Isoelectric Point (pI)

36.98

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
LRR_8 PF13855 252 - 301 4.6e-06 Leucine rich repeat
LRR_14 PF23598 343 - 438 5.5e-09 Leucine-rich repeat region
LRR_8 PF13855 382 - 421 5.5e-07 Leucine rich repeat
LRR_4 PF12799 387 - 423 8.2e-06 Leucine Rich repeats (2 copies)
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready

Orthologous Genes (Group: OG0000048)

Species Orthologous Gene IDs
arabidopsis_thaliana AT2G34930
fragaria_vesca FvH4_3g12670 FvH4_3g12672 FvH4_3g12740 FvH4_3g12742 FvH4_3g12770 FvH4_3g12770 FvH4_3g12860 FvH4_3g12890 FvH4_3g13431 FvH4_3g13433 FvH4_3g13435 FvH4_3g13470 FvH4_3g13470 FvH4_3g13480 FvH4_3g13562 FvH4_3g13580 FvH4_3g13600 FvH4_3g13600 FvH4_3g13600 FvH4_3g13600 FvH4_3g13600 FvH4_3g13600 FvH4_3g13610 FvH4_3g13620 FvH4_3g13620 FvH4_3g23240 FvH4_3g32910 FvH4_3g35070 FvH4_3g45520 FvH4_5g08430 FvH4_5g08450 FvH4_6g53230 FvH4_6g53300
malus_domestica MD05G1217600.v1.1 MD05G1217700.v1.1 MD05G1224700.v1.1 MD05G1225100.v1.1 MD05G1225300.v1.1 MD05G1225400.v1.1 MD05G1235900.v1.1 MD05G1236100.v1.1 MD05G1236300.v1.1 MD05G1237200.v1.1 MD05G1241600.v1.1 MD05G1245700.v1.1 MD05G1245800.v1.1 MD05G1245900.v1.1 MD05G1246000.v1.1 MD05G1246100.v1.1 MD05G1246300.v1.1 MD05G1246400.v1.1 MD05G1246500.v1.1 MD05G1248100.v1.1 MD05G1248200.v1.1 MD05G1264300.v1.1 MD05G1275900.v1.1 MD07G1051400.v1.1 MD09G1012600.v1.1 MD09G1012700.v1.1 MD09G1012800.v1.1 MD10G1221400.v1.1 MD10G1221500.v1.1 MD10G1221600.v1.1 MD10G1221900.v1.1 MD10G1222200.v1.1 MD10G1222400.v1.1 MD10G1222500.v1.1 MD10G1222900.v1.1 MD10G1223000.v1.1 MD10G1223100.v1.1 MD10G1223500.v1.1 MD10G1228000.v1.1 MD12G1019600.v1.1 MD12G1020000.v1.1 MD12G1020100.v1.1 MD17G1013200.v1.1 MD17G1013300.v1.1 MD17G1013400.v1.1
prunus_persica Prupe.1G060500_v2.0.a1 Prupe.1G100100_v2.0.a1 Prupe.3G124000_v2.0.a1 Prupe.3G304400_v2.0.a1 Prupe.4G116800_v2.0.a1 Prupe.4G116900_v2.0.a1 Prupe.4G117000_v2.0.a1 Prupe.4G121800_v2.0.a1 Prupe.4G121900_v2.0.a1 Prupe.4G122000_v2.0.a1 Prupe.4G122100_v2.0.a1 Prupe.4G122200_v2.0.a1 Prupe.4G122300_v2.0.a1 Prupe.4G122500_v2.0.a1 Prupe.4G122600_v2.0.a1 Prupe.4G122800_v2.0.a1 Prupe.4G122900_v2.0.a1 Prupe.4G123000_v2.0.a1 Prupe.4G123100_v2.0.a1 Prupe.4G123200_v2.0.a1 Prupe.4G131500_v2.0.a1 Prupe.4G131600_v2.0.a1 Prupe.7G032500_v2.0.a1 Prupe.7G032900_v2.0.a1 Prupe.7G033000_v2.0.a1 Prupe.7G033100_v2.0.a1 Prupe.7G033300_v2.0.a1 Prupe.7G033600_v2.0.a1 Prupe.7G034600_v2.0.a1 Prupe.7G040200_v2.0.a1 Prupe.7G059200_v2.0.a1
pyrus_communis pycom05g20580 pycom05g20590 pycom05g20760 pycom05g20800 pycom05g21280 pycom05g21290 pycom05g21820 pycom05g21830 pycom05g22180 pycom05g22190 pycom05g22210 pycom05g22450 pycom05g22460 pycom05g22470 pycom05g22480 pycom05g22490 pycom05g23770 pycom05g23780 pycom05g24050 pycom05g24060 pycom07g03910 pycom10g18700 pycom10g18720 pycom10g18730 pycom10g18740 pycom10g19150 pycom111g01060 pycom12g01660 pycom12g01690 pycom12g01720 pycom12g01740 pycom12g01750 pycom12g01770 pycom12g01810 pycom12g01820 pycom12g01830 pycom12g01840 pycom12g01870 pycom12g01900 pycom17g01060 pycom17g01070
rosa_chinensis RchiOBHm_Chr1g0315041 RchiOBHm_Chr1g0315051 RchiOBHm_Chr1g0315071 RchiOBHm_Chr1g0315161 RchiOBHm_Chr1g0315211 RchiOBHm_Chr1g0315251 RchiOBHm_Chr1g0315321 RchiOBHm_Chr1g0315391 RchiOBHm_Chr1g0315451 RchiOBHm_Chr1g0315481 RchiOBHm_Chr1g0315551 RchiOBHm_Chr1g0315601 RchiOBHm_Chr1g0315621 RchiOBHm_Chr1g0359221 RchiOBHm_Chr2g0142981 RchiOBHm_Chr2g0143001 RchiOBHm_Chr2g0143061 RchiOBHm_Chr2g0143091 RchiOBHm_Chr2g0175321 RchiOBHm_Chr2g0175341 RchiOBHm_Chr2g0175361 RchiOBHm_Chr2g0175371 RchiOBHm_Chr3g0470491 RchiOBHm_Chr3g0480881 RchiOBHm_Chr3g0485511 RchiOBHm_Chr5g0020741 RchiOBHm_Chr5g0020901 RchiOBHm_Chr5g0020931 RchiOBHm_Chr5g0020941 RchiOBHm_Chr5g0020961 RchiOBHm_Chr5g0020971 RchiOBHm_Chr5g0021451 RchiOBHm_Chr5g0021531 RchiOBHm_Chr5g0021831 RchiOBHm_Chr5g0021841 RchiOBHm_Chr5g0021931 RchiOBHm_Chr5g0021941 RchiOBHm_Chr5g0021981 RchiOBHm_Chr5g0021991 RchiOBHm_Chr5g0022011 RchiOBHm_Chr5g0022181 RchiOBHm_Chr5g0022191 RchiOBHm_Chr5g0022211 RchiOBHm_Chr5g0022221 RchiOBHm_Chr5g0022231 RchiOBHm_Chr5g0022291 RchiOBHm_Chr5g0022301 RchiOBHm_Chr5g0022331 RchiOBHm_Chr5g0022361 RchiOBHm_Chr5g0022371 RchiOBHm_Chr5g0022381 RchiOBHm_Chr5g0022401 RchiOBHm_Chr5g0022431 RchiOBHm_Chr5g0022451 RchiOBHm_Chr5g0022541 RchiOBHm_Chr5g0022591 RchiOBHm_Chr5g0022601 RchiOBHm_Chr5g0022701 RchiOBHm_Chr5g0022741 RchiOBHm_Chr5g0022791 RchiOBHm_Chr5g0022811 RchiOBHm_Chr5g0022851 RchiOBHm_Chr5g0029441 RchiOBHm_Chr5g0041631 RchiOBHm_Chr5g0069391 RchiOBHm_Chr6g0273811 RchiOBHm_Chr6g0273831 RchiOBHm_Chr6g0275331 RchiOBHm_Chr7g0219061
rosa_laevigata RLG00000002463 RLG00000020007 RLG00000020008 RLG00000022320 RLG00000022321 RLG00000023446 RLG00000030742 RLG00000030743 RLG00000030747 RLG00000032557 RLG00000032564 RLG00000032571 RLG00000032573 RLG00000032574 RLG00000032612 RLG00000032633 RLG00000032636 RLG00000032638 RLG00000032650 RLG00000032651 RLG00000032652 RLG00000032653 RLG00000032655 RLG00000032673 RLG00000032678 RLG00000032769 RLG00000032857 RLG00000033168 RLG00000033465 RLG00000034086 RLG00000034222 RLG00000035290
rosa_multiflora Rmu_co8143358.1_g000001 Rmu_co8518791.1_g000001 Rmu_sc0000178.1_g000008 Rmu_sc0000178.1_g000014 Rmu_sc0000401.1_g000005 Rmu_sc0000401.1_g000013 Rmu_sc0000401.1_g000017 Rmu_sc0000401.1_g000018 Rmu_sc0000401.1_g000024 Rmu_sc0000401.1_g000025 Rmu_sc0000576.1_g000020 Rmu_sc0001585.1_g000003 Rmu_sc0001585.1_g000005 Rmu_sc0001585.1_g000008 Rmu_sc0001784.1_g000006 Rmu_sc0001784.1_g000011 Rmu_sc0001784.1_g000022 Rmu_sc0001784.1_g000028 Rmu_sc0002052.1_g000004 Rmu_sc0002052.1_g000011 Rmu_sc0002277.1_g000003 Rmu_sc0002277.1_g000006 Rmu_sc0002277.1_g000024 Rmu_sc0002658.1_g000012 Rmu_sc0003512.1_g000004 Rmu_sc0003512.1_g000007 Rmu_sc0004180.1_g000016 Rmu_sc0004180.1_g000029 Rmu_sc0004180.1_g000034 Rmu_sc0005639.1_g000008 Rmu_sc0005639.1_g000023 Rmu_sc0006070.1_g000016 Rmu_sc0006070.1_g000017 Rmu_sc0006966.1_g000021 Rmu_sc0006966.1_g000023 Rmu_sc0007239.1_g000003 Rmu_sc0008460.1_g000010 Rmu_sc0009984.1_g000008 Rmu_sc0010181.1_g000005 Rmu_sc0010181.1_g000010 Rmu_sc0010503.1_g000006 Rmu_sc0011646.1_g000003 Rmu_sc0012984.1_g000011 Rmu_sc0016972.1_g000005 Rmu_sc0016972.1_g000008 Rmu_sc0023070.1_g000003 Rmu_sc0025660.1_g000001 Rmu_ssc0000322.1_g000019
rosa_roxburghii Rroxscaffold_1G00038860 Rroxscaffold_1G00053490 Rroxscaffold_1G00053500 Rroxscaffold_1G00054230 Rroxscaffold_1G00056460 Rroxscaffold_1G00056470 Rroxscaffold_1G00056480 Rroxscaffold_1G00056500 Rroxscaffold_1G00056510 Rroxscaffold_1G00056620 Rroxscaffold_1G00056690 Rroxscaffold_1G00056710 Rroxscaffold_1G00056720 Rroxscaffold_1G00056730 Rroxscaffold_1G00056740 Rroxscaffold_1G00056750 Rroxscaffold_1G00056760 Rroxscaffold_1G00056870 Rroxscaffold_1G00056900 Rroxscaffold_1G00057120 Rroxscaffold_1G00057560 Rroxscaffold_2G00077430 Rroxscaffold_2G00102160 Rroxscaffold_3G00231420 Rroxscaffold_3G00231430 Rroxscaffold_4G00297230 Rroxscaffold_4G00331570 Rroxscaffold_6G00396700 Rroxscaffold_6G00400940 Rroxscaffold_7G00192740
rosa_rugosa Rorug01G0004400 Rorug01G0004500 Rorug02G0377600 Rorug02G0378000 Rorug02G0582800 Rorug02G0583400 Rorug03G0187000 Rorug03G0218800 Rorug04G0081200 Rorug05G0062700 Rorug05G0062700 Rorug05G0063100 Rorug05G0063200 Rorug05G0063200 Rorug05G0063200 Rorug05G0067000 Rorug05G0069700 Rorug05G0069900 Rorug05G0070000 Rorug05G0070100 Rorug05G0070300 Rorug05G0070400 Rorug05G0070600 Rorug05G0070600 Rorug05G0072300 Rorug05G0072400 Rorug05G0072500 Rorug05G0072500 Rorug05G0072600.1 Rorug05G0072700 Rorug05G0072800 Rorug05G0072800 Rorug05G0072900 Rorug05G0073000 Rorug05G0073000 Rorug05G0073400 Rorug05G0073400 Rorug05G0073400 Rorug05G0074800 Rorug05G0075000 Rorug05G0114300 Rorug05G0194200 Rorug06G0097800
rosa_samantha Rh2AG401400 Rh2CG387600 Rh2CG417000 Rh2CG637400 Rh5CG169600 Rh5CG172100 Rh5CG175200 Rh5CG317100 Rh6DG187900
rosa_wichuraiana Rw1G000750 Rw1G000790 Rw1G000820 Rw1G000860 Rw1G000880 Rw1G000910 Rw2G035180 Rw2G035200 Rw2G035240 Rw2G054370 Rw2G054380 Rw5G013570 Rw5G013580 Rw5G013590 Rw5G013910 Rw5G013980 Rw5G014110 Rw5G014120 Rw5G014280 Rw5G014310 Rw5G014400 Rw5G014420 Rw5G014440 Rw5G014460 Rw5G014480 Rw5G014500 Rw5G014520 Rw5G014530 Rw5G042390

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 1 cut(s) 1254
AasI GACNNNNNNGTC 1 cut(s) 1231
Acc16I TGCGCA 1 cut(s) 470
AciI CCGC 1 cut(s) 1341
AclWI GGATC 3 cut(s) 748, 771, 829
AcoI YGGCCR 1 cut(s) 793
AcsI RAATTY 8 cut(s) 506, 651, 710, 996, 1200, 1272, 1523, 1593
AcuI CTGAAG 4 cut(s) 765, 815, 972, 1083
AfaI GTAC 4 cut(s) 7, 199, 407, 1483
AfiI CCNNNNNNNGG 2 cut(s) 146, 355
AhlI ACTAGT 1 cut(s) 194
AjnI CCWGG 1 cut(s) 1363
AjuI GAANNNNNNNTTGG 2 cut(s) 297, 329
AluBI AGCT 7 cut(s) 103, 144, 295, 370, 525, 606, 1212
AluI AGCT 7 cut(s) 103, 144, 295, 370, 525, 606, 1212
Alw21I GWGCWC 1 cut(s) 1449
Alw26I GTCTC 3 cut(s) 30, 682, 1239
AlwI GGATC 3 cut(s) 748, 771, 829
AoxI GGCC 2 cut(s) 358, 793
ApoI RAATTY 8 cut(s) 506, 651, 710, 996, 1200, 1272, 1523, 1593
Asp700I GAANNNNTTC 1 cut(s) 1276
AspLEI GCGC 1 cut(s) 471
AspS9I GGNCC 4 cut(s) 137, 358, 375, 431
AsuHPI GGTGA 4 cut(s) 178, 916, 1064, 1178
AsuII TTCGAA 1 cut(s) 316
AsuNHI GCTAGC 1 cut(s) 1555
AvaII GGWCC 3 cut(s) 137, 375, 431
AxyI CCTNAGG 1 cut(s) 513
BalI TGGCCA 1 cut(s) 795
Bbv12I GWGCWC 1 cut(s) 1449
BcgI CGANNNNNNTGC 4 cut(s) 523, 557, 1429, 1463
BciT130I CCWGG 1 cut(s) 1365
BciVI GTATCC 2 cut(s) 608, 1103
BcoDI GTCTC 3 cut(s) 30, 682, 1239
BcuI ACTAGT 1 cut(s) 194
BfaI CTAG 3 cut(s) 141, 195, 1556
BfmI CTRYAG 1 cut(s) 767
BfuI GTATCC 2 cut(s) 608, 1103
BmcAI AGTACT 1 cut(s) 199
Bme1390I CCNGG 1 cut(s) 1365
Bme18I GGWCC 3 cut(s) 137, 375, 431
BmgT120I GGNCC 4 cut(s) 137, 358, 375, 431
BmiI GGNNCC 2 cut(s) 90, 1347
BmrFI CCNGG 1 cut(s) 1365
BmsI GCATC 1 cut(s) 480
BmtI GCTAGC 1 cut(s) 1559
BoxI GACNNNNGTC 3 cut(s) 55, 126, 846
BplI GAGNNNNNCTC 2 cut(s) 1189, 1221
BpmI CTGGAG 3 cut(s) 350, 522, 1371
Bpu14I TTCGAA 1 cut(s) 316
BsaJI CCNNGG 3 cut(s) 591, 844, 1363
BsaXI ACNNNNNCTCC 2 cut(s) 1118, 1148
Bsc4I CCNNNNNNNGG 2 cut(s) 146, 355
Bse1I ACTGG 3 cut(s) 205, 378, 906
Bse21I CCTNAGG 1 cut(s) 513
BseBI CCWGG 1 cut(s) 1365
BseDI CCNNGG 3 cut(s) 591, 844, 1363
BseGI GGATG 2 cut(s) 471, 1310
BseLI CCNNNNNNNGG 2 cut(s) 146, 355
BseMII CTCAG 4 cut(s) 185, 496, 504, 1220
BseNI ACTGG 3 cut(s) 205, 378, 906
BshFI GGCC 2 cut(s) 360, 795
BsiHKAI GWGCWC 1 cut(s) 1449
BslFI GGGAC 2 cut(s) 463, 880
BslI CCNNNNNNNGG 2 cut(s) 146, 355
BsmAI GTCTC 3 cut(s) 30, 682, 1239
BsmFI GGGAC 2 cut(s) 463, 880
BsmI GAATGC 1 cut(s) 913
BsnI GGCC 2 cut(s) 360, 795
Bsp119I TTCGAA 1 cut(s) 316
Bsp1286I GDGCHC 1 cut(s) 1449
Bsp143I GATC 5 cut(s) 694, 740, 776, 834, 1027
Bsp19I CCATGG 1 cut(s) 591
BspACI CCGC 1 cut(s) 1341
BspANI GGCC 2 cut(s) 360, 795
BspCNI CTCAG 4 cut(s) 184, 495, 505, 1219
BspLI GGNNCC 2 cut(s) 90, 1347
BspOI GCTAGC 1 cut(s) 1559
BspPI GGATC 3 cut(s) 748, 771, 829
BspT104I TTCGAA 1 cut(s) 316
BsrI ACTGG 3 cut(s) 205, 378, 906
BssECI CCNNGG 3 cut(s) 591, 844, 1363
BssMI GATC 5 cut(s) 694, 740, 776, 834, 1027
BssT1I CCWWGG 2 cut(s) 591, 844
Bst2UI CCWGG 1 cut(s) 1365
Bst4CI ACNGT 5 cut(s) 729, 771, 964, 1233, 1338
BstAPI GCANNNNNTGC 1 cut(s) 466
BstBI TTCGAA 1 cut(s) 316
BstC8I GCNNGC 2 cut(s) 458, 1557
BstDEI CTNAG 4 cut(s) 171, 482, 513, 1206
BstDSI CCRYGG 1 cut(s) 591
BstF5I GGATG 2 cut(s) 471, 1310
BstHHI GCGC 1 cut(s) 471
BstKTI GATC 5 cut(s) 697, 743, 779, 837, 1030
BstMAI GTCTC 3 cut(s) 30, 682, 1239
BstMBI GATC 5 cut(s) 694, 740, 776, 834, 1027
BstMWI GCNNNNNNNGC 4 cut(s) 466, 531, 772, 1556
BstNI CCWGG 1 cut(s) 1365
BstNSI RCATGY 1 cut(s) 460
BstPAI GACNNNNGTC 3 cut(s) 55, 126, 846
BstSCI CCNGG 1 cut(s) 1363
BstSFI CTRYAG 1 cut(s) 767
BstX2I RGATCY 2 cut(s) 740, 834
BstXI CCANNNNNNTGG 1 cut(s) 228
BstYI RGATCY 2 cut(s) 740, 834
Bsu36I CCTNAGG 1 cut(s) 513
BsuI GTATCC 2 cut(s) 608, 1103
BsuRI GGCC 2 cut(s) 360, 795
BtgI CCRYGG 1 cut(s) 591
BtsCI GGATG 2 cut(s) 471, 1310
BtsIMutI CAGTG 3 cut(s) 899, 1229, 1334
Cac8I GCNNGC 2 cut(s) 458, 1557
CfoI GCGC 1 cut(s) 471
Cfr13I GGNCC 4 cut(s) 137, 358, 375, 431
Csp6I GTAC 4 cut(s) 6, 198, 406, 1482
CspCI CAANNNNNGTGG 2 cut(s) 13, 48
CviAII CATG 5 cut(s) 228, 457, 519, 592, 1503
CviQI GTAC 4 cut(s) 6, 198, 406, 1482
DdeI CTNAG 4 cut(s) 171, 482, 513, 1206
DpnI GATC 5 cut(s) 696, 742, 778, 836, 1029
DpnII GATC 5 cut(s) 694, 740, 776, 834, 1027
DraI TTTAAA 1 cut(s) 1522
DrdI GACNNNNNNGTC 1 cut(s) 1231
DseDI GACNNNNNNGTC 1 cut(s) 1231
EaeI YGGCCR 1 cut(s) 793
Eco130I CCWWGG 2 cut(s) 591, 844
Eco32I GATATC 1 cut(s) 243
Eco47I GGWCC 3 cut(s) 137, 375, 431
Eco57I CTGAAG 4 cut(s) 765, 815, 972, 1083
Eco81I CCTNAGG 1 cut(s) 513
EcoO109I RGGNCCY 2 cut(s) 137, 431
EcoRI GAATTC 4 cut(s) 506, 996, 1200, 1272
EcoRII CCWGG 1 cut(s) 1363
EcoRV GATATC 1 cut(s) 243
EcoT14I CCWWGG 2 cut(s) 591, 844
ErhI CCWWGG 2 cut(s) 591, 844
FaeI CATG 5 cut(s) 231, 460, 522, 595, 1506
FalI AAGNNNNNCTT 4 cut(s) 174, 206, 1261, 1293
FaqI GGGAC 2 cut(s) 463, 880
FatI CATG 5 cut(s) 227, 456, 518, 591, 1502
FauI CCCGC 1 cut(s) 1334
FokI GGATG 2 cut(s) 458, 1297
FspAI RTGCGCAY 1 cut(s) 470
FspBI CTAG 3 cut(s) 141, 195, 1556
FspI TGCGCA 1 cut(s) 470
GlaI GCGC 1 cut(s) 470
GsuI CTGGAG 3 cut(s) 350, 522, 1371
HaeIII GGCC 2 cut(s) 360, 795
HhaI GCGC 1 cut(s) 471
Hin1II CATG 5 cut(s) 231, 460, 522, 595, 1506
Hin6I GCGC 1 cut(s) 469
HinP1I GCGC 1 cut(s) 469
HincII GTYRAC 1 cut(s) 894
HindII GTYRAC 1 cut(s) 894
HindIII AAGCTT 2 cut(s) 101, 293
HinfI GANTC 8 cut(s) 38, 204, 340, 1039, 1111, 1307, 1327, 1452
HphI GGTGA 4 cut(s) 178, 916, 1064, 1178
Hpy166II GTNNAC 1 cut(s) 894
Hpy188I TCNGA 8 cut(s) 181, 415, 485, 745, 834, 1209, 1357, 1451
Hpy188III TCNNGA 9 cut(s) 235, 288, 501, 950, 1061, 1096, 1169, 1281, 1388
Hpy8I GTNNAC 1 cut(s) 894
HpyAV CCTTC 3 cut(s) 666, 1287, 1413
HpyCH4III ACNGT 5 cut(s) 729, 771, 964, 1233, 1338
HpyCH4IV ACGT 2 cut(s) 56, 1579
HpyCH4V TGCA 6 cut(s) 460, 614, 667, 816, 1153, 1585
HpyF10VI GCNNNNNNNGC 4 cut(s) 466, 531, 772, 1556
HpyF3I CTNAG 4 cut(s) 171, 482, 513, 1206
HpySE526I ACGT 2 cut(s) 56, 1579
Hsp92II CATG 5 cut(s) 231, 460, 522, 595, 1506
HspAI GCGC 1 cut(s) 469
Kzo9I GATC 5 cut(s) 694, 740, 776, 834, 1027
LmnI GCTCC 3 cut(s) 391, 522, 531
LweI GCATC 1 cut(s) 480
MaeI CTAG 3 cut(s) 141, 195, 1556
MaeII ACGT 2 cut(s) 56, 1579
MaeIII GTNAC 5 cut(s) 57, 73, 184, 848, 1332
MalI GATC 5 cut(s) 696, 742, 778, 836, 1029
MboI GATC 5 cut(s) 694, 740, 776, 834, 1027
MfeI CAATTG 3 cut(s) 124, 809, 1560
MflI RGATCY 2 cut(s) 740, 834
MhlI GDGCHC 1 cut(s) 1449
MlsI TGGCCA 1 cut(s) 795
MluNI TGGCCA 1 cut(s) 795
MlyI GAGTC 2 cut(s) 32, 349
MmeI TCCRAC 2 cut(s) 738, 804
Mox20I TGGCCA 1 cut(s) 795
MroXI GAANNNNTTC 1 cut(s) 1276
MscI TGGCCA 1 cut(s) 795
MseI TTAA 4 cut(s) 788, 1118, 1487, 1521
Msp20I TGGCCA 1 cut(s) 795
MspR9I CCNGG 1 cut(s) 1365
MunI CAATTG 3 cut(s) 124, 809, 1560
Mva1269I GAATGC 1 cut(s) 913
MvaI CCWGG 1 cut(s) 1365
MwoI GCNNNNNNNGC 4 cut(s) 466, 531, 772, 1556
NcoI CCATGG 1 cut(s) 591
NdeII GATC 5 cut(s) 694, 740, 776, 834, 1027
NheI GCTAGC 1 cut(s) 1555
NlaIII CATG 5 cut(s) 231, 460, 522, 595, 1506
NlaIV GGNNCC 2 cut(s) 90, 1347
NmuCI GTSAC 4 cut(s) 57, 184, 848, 1332
NsbI TGCGCA 1 cut(s) 470
NspI RCATGY 1 cut(s) 460
NspV TTCGAA 1 cut(s) 316
PaeI GCATGC 1 cut(s) 460
PctI GAATGC 1 cut(s) 913
PdmI GAANNNNTTC 1 cut(s) 1276
PfeI GAWTC 6 cut(s) 204, 1039, 1111, 1307, 1327, 1452
PleI GAGTC 2 cut(s) 32, 348
PpsI GAGTC 2 cut(s) 32, 348
PpuMI RGGWCCY 2 cut(s) 137, 431
PshAI GACNNNNGTC 3 cut(s) 55, 126, 846
PsiI TTATAA 1 cut(s) 1254
Psp5II RGGWCCY 2 cut(s) 137, 431
Psp6I CCWGG 1 cut(s) 1363
PspGI CCWGG 1 cut(s) 1363
PspN4I GGNNCC 2 cut(s) 90, 1347
PspPI GGNCC 4 cut(s) 137, 358, 375, 431
PspPPI RGGWCCY 2 cut(s) 137, 431
PsuI RGATCY 2 cut(s) 740, 834
RsaI GTAC 4 cut(s) 7, 199, 407, 1483
RsaNI GTAC 4 cut(s) 6, 198, 406, 1482
SaqAI TTAA 4 cut(s) 788, 1118, 1487, 1521
Sau3AI GATC 5 cut(s) 694, 740, 776, 834, 1027
Sau96I GGNCC 4 cut(s) 137, 358, 375, 431
ScaI AGTACT 1 cut(s) 199
SchI GAGTC 2 cut(s) 32, 349
ScrFI CCNGG 1 cut(s) 1365
SduI GDGCHC 1 cut(s) 1449
SfaNI GCATC 1 cut(s) 480
SfcI CTRYAG 1 cut(s) 767
SfuI TTCGAA 1 cut(s) 316
SinI GGWCC 3 cut(s) 137, 375, 431
SpeI ACTAGT 1 cut(s) 194
SphI GCATGC 1 cut(s) 460
SsiI CCGC 1 cut(s) 1341
SspI AATATT 2 cut(s) 260, 618
SspMI CTAG 3 cut(s) 141, 195, 1556
StyD4I CCNGG 1 cut(s) 1363
StyI CCWWGG 2 cut(s) 591, 844
TaaI ACNGT 5 cut(s) 729, 771, 964, 1233, 1338
TaiI ACGT 2 cut(s) 59, 1582
TaqI TCGA 4 cut(s) 41, 316, 987, 1037
TaqII GACCGA 1 cut(s) 1393
TatI WGTACW 1 cut(s) 197
TfiI GAWTC 6 cut(s) 204, 1039, 1111, 1307, 1327, 1452
Tru1I TTAA 4 cut(s) 788, 1118, 1487, 1521
Tru9I TTAA 4 cut(s) 788, 1118, 1487, 1521
TscAI CASTG 3 cut(s) 906, 1236, 1341
TseFI GTSAC 4 cut(s) 57, 184, 848, 1332
Tsp45I GTSAC 4 cut(s) 57, 184, 848, 1332
TspDTI ATGAA 4 cut(s) 298, 641, 1299, 1419
TspGWI ACGGA 2 cut(s) 288, 1320
TspRI CASTG 3 cut(s) 906, 1236, 1341
VpaK11BI GGWCC 3 cut(s) 137, 375, 431
XapI RAATTY 8 cut(s) 506, 651, 710, 996, 1200, 1272, 1523, 1593
XceI RCATGY 1 cut(s) 460
XcmI CCANNNNNNNNNTGG 1 cut(s) 1009
XmnI GAANNNNTTC 1 cut(s) 1276
XspI CTAG 3 cut(s) 141, 195, 1556
ZrmI AGTACT 1 cut(s) 199
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.