Rw5G014280

LRR receptor-like serine threonine-protein kinase

Basic Information

Type: gene
Biological Identity
rosa_wichuraiana
Chr5
Physical Location & Seq
Forward (+)
16981899 .. 16991415
9517 bp
Loading structure...
UTR
Exon/CDS
Intron
Rw5G014280.1

Sequence Viewer

Length: 2607 bp
ATGGATAGCTTCTATGCGAACTTATTCAAGCATACCAGCTATCACATCCTCATCCATAACATTGTTCACTACTTGCTCTTTCTACTTTTGGCTTCTTCATCATATCTGCAGACTACTAAATCATGCATTGAGGAAGAGAGACGTGCCCTTCTCAGCTTTAAACATCATGTCGCTGATCCTTATGGCAGGCTTTCTTCTTGGGTGGGTCACGATTGCTGTCGATGGAAAGGGATTTCATGCAACAATCGAACTGGCCACGTCGCAAAGATAGACCTCCAGAATACACATTATCATGATCATGATGAAGGTGAAGAGTTGGACTTGCTGGCTCATGAGCATACATCTTTGGGGGGTATGATAAATCCTTCCCTGCTTACCTTAACACATTTATATTACCTAGACCTTAGCTGTAATTATTTTCAAGATATTCACATTCCCATCTCATTGCCAAAGATGAACATCACATCCCTTTTGATCCTTGATATGTCACAGAATTGGATCGTATCGTCAATTCCCAGCTGGTTGTTTAACCTTACCAGCCTCAGAAAACTTGATCTAAGTGGGAATTCTTTCGGTGGTTCCATAGCTTGGGAATTGGGAAGCCTCAAAAATCTGGAAGAGCTTGATTTATCTAGTAATGCCTTCGAAGGTCAAGTTCCGAGACTCATTGGAAATTCGAAGTCAGTAGATTTGTCTTTGAATAGGCTAAACTGCAAATTTCCTGCTTCTCTGGGCATGTTTCAAAATTTGCAGTATCTTAATCTTGAGTCCAACACTGTTGGGGGCACAATTCCAGAGTCAATAGGAAACTTGTCATCCTTGAAAACTCTAAATCTCAGGTATAATCATATGAATGGGTCCGTTCCTGAAAGTCTGGGACAACTCTCTCAGCTACTTCAGTTAGATCTGTCAGAGAATTCCTGGGCAGGTAGTCTATTGGAATCCCATTTCATCAATCTCACTAGGTTAGAGTCTTTTGCAGTCAGCACAAATCAACCTATGTCCATCATTTTCAATGCGACTTGGGTTGCTCCTTTTATGCTCAACACAATTGACATTAGGAAATGTAGCATAGATCCGTCCTTTCTTGTATGGCTTCAATCTCAAACTGAATTGTCCATCGTTACCCTTTCAAGTACAAACATCTCGGGTCCCATATCAGAGGAATGGTTCTTCAAGTTTCCCCAAATCGAGTATTTGGATTTATCTTACAATCAAATCCCTGGAAAGCTTCCATTGCTACTGAAATGTCCAAATCTAAATCATATAGATTTGAGTCATAACCAATTTGAAGGTCCATTTCCATTTTATTCTTCTAATGTCTCCATTCTCAATCTTGAAAGCAATTTACTTTCGGGGCCAATTCCCTCGAATTTGGACCAGTTGATGCCTAACTTGAGAGAACTGTATCTCTCTGAGAATAAATTGAATGGTACTATTCCAGCCTCTATGTGCAACATGACAAACTTGGCAATTCTTACATTGAGGAGAAATCAATTGTCTGGAGAATTCCCTCAAGCATGGAGTCTGTGGAGCAATATACTGGTAGTAGATGTAGGATACAATAATCTCTCTGGTGATATTCCCAGCTCAATGGGTGTTCCAAGCTCTCTTGCTATATTGAAGCTGAACAACAACAACTTTGGGGGTGAACTTCCTTCTTTGATATTTGAGAATTGCACAAGATTGAAGAGTGTCGATCTTGGAAGCAACCGATTCACTGGAAGCCTACCTTCAAAGATATCATCAGAATTGTTTATCCTACGGCTACGATCCAACTTTTTCAGTGGGCATATACCCCATGAGTTGTGCCTTCTTTCCATGCTTCATGTCTTGGACCTTGGTGACAACAACTTTTCAGGGACTATTCCCAAGTGTTTGAAGGAAATGTATTCCTTGGTTGAAAGCTTTTCCAACGTCAGTTACTATGATAGTTATTTTGAGCAAATCACGTTGATGTCAAAAGGAACAGAACTGACATACAACAAGACTATTTTTTTCGTGAATATCATTGATCTTTCGTCAAACAATTTAGAAGGTGAAATCCCTGAAGTAGTAAGTAGTCTCGTTGGATTGGGTACCTTGAACTTGTCAAGGAATCATTTAAGCGGACAGATTCCCTCGAAGATTGGAAACTTGCGATGGTTGGAAACCCTTGATCTCTCACATAATCACCTCTCGGGACCGATTCCTCAAAGTTTGTCTACTTTAACCTCCTTGTCTCACTTGAATTTGTCCTACAACAACTTGGCTGGAAGAATTCCCTCGAGCACACAACTTACTACACTTGTTGATTCATCAATATACGAAGCCAATCCATTATTGTGTGGGGTTCCTCTTGCAACCAAGTGCTCGGGATATAGCGCACCTGCTGCTCTGGATGGGAAAGACAACAAAGATGAAGATGACAATGAAAAGCTTGTTTTCTATGGTAGCATTGTATTTGGCTTTATCATAGGCTTTTGGGGTGTTTGGGGCGCATTGCTTATCAAGAAATCATGGAGGTATGCTTACTTTCAATTCTTTGATAAAATCAAAGATCAAGTTGCATTAAGGATTGCATTGACAGTGGCTCGTTGGCATCGAAGCAGGTCTTTATTGGTTTAA

Protein Analysis

868

Amino Acids

97.11

Weight (kDa)

5.83

Isoelectric Point (pI)

46.27

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
LRRNT_2 PF08263 44 - 81 8.1e-12 Leucine rich repeat N-terminal domain
LRR_8 PF13855 129 - 190 1.1e-06 Leucine rich repeat
LRR_14 PF23598 243 - 336 9.7e-10 Leucine-rich repeat region
LRR_8 PF13855 249 - 306 2.2e-07 Leucine rich repeat
LRR_8 PF13855 371 - 430 5.2e-07 Leucine rich repeat
LRR_4 PF12799 395 - 429 3.2e-06 Leucine Rich repeats (2 copies)
LRR_8 PF13855 440 - 500 1e-05 Leucine rich repeat
LRR_14 PF23598 670 - 768 1.2e-07 Leucine-rich repeat region
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready

Orthologous Genes (Group: OG0000048)

Species Orthologous Gene IDs
arabidopsis_thaliana AT2G34930
fragaria_vesca FvH4_3g12670 FvH4_3g12672 FvH4_3g12740 FvH4_3g12742 FvH4_3g12770 FvH4_3g12770 FvH4_3g12860 FvH4_3g12890 FvH4_3g13431 FvH4_3g13433 FvH4_3g13435 FvH4_3g13470 FvH4_3g13470 FvH4_3g13480 FvH4_3g13562 FvH4_3g13580 FvH4_3g13600 FvH4_3g13600 FvH4_3g13600 FvH4_3g13600 FvH4_3g13600 FvH4_3g13600 FvH4_3g13610 FvH4_3g13620 FvH4_3g13620 FvH4_3g23240 FvH4_3g32910 FvH4_3g35070 FvH4_3g45520 FvH4_5g08430 FvH4_5g08450 FvH4_6g53230 FvH4_6g53300
malus_domestica MD05G1217600.v1.1 MD05G1217700.v1.1 MD05G1224700.v1.1 MD05G1225100.v1.1 MD05G1225300.v1.1 MD05G1225400.v1.1 MD05G1235900.v1.1 MD05G1236100.v1.1 MD05G1236300.v1.1 MD05G1237200.v1.1 MD05G1241600.v1.1 MD05G1245700.v1.1 MD05G1245800.v1.1 MD05G1245900.v1.1 MD05G1246000.v1.1 MD05G1246100.v1.1 MD05G1246300.v1.1 MD05G1246400.v1.1 MD05G1246500.v1.1 MD05G1248100.v1.1 MD05G1248200.v1.1 MD05G1264300.v1.1 MD05G1275900.v1.1 MD07G1051400.v1.1 MD09G1012600.v1.1 MD09G1012700.v1.1 MD09G1012800.v1.1 MD10G1221400.v1.1 MD10G1221500.v1.1 MD10G1221600.v1.1 MD10G1221900.v1.1 MD10G1222200.v1.1 MD10G1222400.v1.1 MD10G1222500.v1.1 MD10G1222900.v1.1 MD10G1223000.v1.1 MD10G1223100.v1.1 MD10G1223500.v1.1 MD10G1228000.v1.1 MD12G1019600.v1.1 MD12G1020000.v1.1 MD12G1020100.v1.1 MD17G1013200.v1.1 MD17G1013300.v1.1 MD17G1013400.v1.1
prunus_persica Prupe.1G060500_v2.0.a1 Prupe.1G100100_v2.0.a1 Prupe.3G124000_v2.0.a1 Prupe.3G304400_v2.0.a1 Prupe.4G116800_v2.0.a1 Prupe.4G116900_v2.0.a1 Prupe.4G117000_v2.0.a1 Prupe.4G121800_v2.0.a1 Prupe.4G121900_v2.0.a1 Prupe.4G122000_v2.0.a1 Prupe.4G122100_v2.0.a1 Prupe.4G122200_v2.0.a1 Prupe.4G122300_v2.0.a1 Prupe.4G122500_v2.0.a1 Prupe.4G122600_v2.0.a1 Prupe.4G122800_v2.0.a1 Prupe.4G122900_v2.0.a1 Prupe.4G123000_v2.0.a1 Prupe.4G123100_v2.0.a1 Prupe.4G123200_v2.0.a1 Prupe.4G131500_v2.0.a1 Prupe.4G131600_v2.0.a1 Prupe.7G032500_v2.0.a1 Prupe.7G032900_v2.0.a1 Prupe.7G033000_v2.0.a1 Prupe.7G033100_v2.0.a1 Prupe.7G033300_v2.0.a1 Prupe.7G033600_v2.0.a1 Prupe.7G034600_v2.0.a1 Prupe.7G040200_v2.0.a1 Prupe.7G059200_v2.0.a1
pyrus_communis pycom05g20580 pycom05g20590 pycom05g20760 pycom05g20800 pycom05g21280 pycom05g21290 pycom05g21820 pycom05g21830 pycom05g22180 pycom05g22190 pycom05g22210 pycom05g22450 pycom05g22460 pycom05g22470 pycom05g22480 pycom05g22490 pycom05g23770 pycom05g23780 pycom05g24050 pycom05g24060 pycom07g03910 pycom10g18700 pycom10g18720 pycom10g18730 pycom10g18740 pycom10g19150 pycom111g01060 pycom12g01660 pycom12g01690 pycom12g01720 pycom12g01740 pycom12g01750 pycom12g01770 pycom12g01810 pycom12g01820 pycom12g01830 pycom12g01840 pycom12g01870 pycom12g01900 pycom17g01060 pycom17g01070
rosa_chinensis RchiOBHm_Chr1g0315041 RchiOBHm_Chr1g0315051 RchiOBHm_Chr1g0315071 RchiOBHm_Chr1g0315161 RchiOBHm_Chr1g0315211 RchiOBHm_Chr1g0315251 RchiOBHm_Chr1g0315321 RchiOBHm_Chr1g0315391 RchiOBHm_Chr1g0315451 RchiOBHm_Chr1g0315481 RchiOBHm_Chr1g0315551 RchiOBHm_Chr1g0315601 RchiOBHm_Chr1g0315621 RchiOBHm_Chr1g0359221 RchiOBHm_Chr2g0142981 RchiOBHm_Chr2g0143001 RchiOBHm_Chr2g0143061 RchiOBHm_Chr2g0143091 RchiOBHm_Chr2g0175321 RchiOBHm_Chr2g0175341 RchiOBHm_Chr2g0175361 RchiOBHm_Chr2g0175371 RchiOBHm_Chr3g0470491 RchiOBHm_Chr3g0480881 RchiOBHm_Chr3g0485511 RchiOBHm_Chr5g0020741 RchiOBHm_Chr5g0020901 RchiOBHm_Chr5g0020931 RchiOBHm_Chr5g0020941 RchiOBHm_Chr5g0020961 RchiOBHm_Chr5g0020971 RchiOBHm_Chr5g0021451 RchiOBHm_Chr5g0021531 RchiOBHm_Chr5g0021831 RchiOBHm_Chr5g0021841 RchiOBHm_Chr5g0021931 RchiOBHm_Chr5g0021941 RchiOBHm_Chr5g0021981 RchiOBHm_Chr5g0021991 RchiOBHm_Chr5g0022011 RchiOBHm_Chr5g0022181 RchiOBHm_Chr5g0022191 RchiOBHm_Chr5g0022211 RchiOBHm_Chr5g0022221 RchiOBHm_Chr5g0022231 RchiOBHm_Chr5g0022291 RchiOBHm_Chr5g0022301 RchiOBHm_Chr5g0022331 RchiOBHm_Chr5g0022361 RchiOBHm_Chr5g0022371 RchiOBHm_Chr5g0022381 RchiOBHm_Chr5g0022401 RchiOBHm_Chr5g0022431 RchiOBHm_Chr5g0022451 RchiOBHm_Chr5g0022541 RchiOBHm_Chr5g0022591 RchiOBHm_Chr5g0022601 RchiOBHm_Chr5g0022701 RchiOBHm_Chr5g0022741 RchiOBHm_Chr5g0022791 RchiOBHm_Chr5g0022811 RchiOBHm_Chr5g0022851 RchiOBHm_Chr5g0029441 RchiOBHm_Chr5g0041631 RchiOBHm_Chr5g0069391 RchiOBHm_Chr6g0273811 RchiOBHm_Chr6g0273831 RchiOBHm_Chr6g0275331 RchiOBHm_Chr7g0219061
rosa_laevigata RLG00000002463 RLG00000020007 RLG00000020008 RLG00000022320 RLG00000022321 RLG00000023446 RLG00000030742 RLG00000030743 RLG00000030747 RLG00000032557 RLG00000032564 RLG00000032571 RLG00000032573 RLG00000032574 RLG00000032612 RLG00000032633 RLG00000032636 RLG00000032638 RLG00000032650 RLG00000032651 RLG00000032652 RLG00000032653 RLG00000032655 RLG00000032673 RLG00000032678 RLG00000032769 RLG00000032857 RLG00000033168 RLG00000033465 RLG00000034086 RLG00000034222 RLG00000035290
rosa_multiflora Rmu_co8143358.1_g000001 Rmu_co8518791.1_g000001 Rmu_sc0000178.1_g000008 Rmu_sc0000178.1_g000014 Rmu_sc0000401.1_g000005 Rmu_sc0000401.1_g000013 Rmu_sc0000401.1_g000017 Rmu_sc0000401.1_g000018 Rmu_sc0000401.1_g000024 Rmu_sc0000401.1_g000025 Rmu_sc0000576.1_g000020 Rmu_sc0001585.1_g000003 Rmu_sc0001585.1_g000005 Rmu_sc0001585.1_g000008 Rmu_sc0001784.1_g000006 Rmu_sc0001784.1_g000011 Rmu_sc0001784.1_g000022 Rmu_sc0001784.1_g000028 Rmu_sc0002052.1_g000004 Rmu_sc0002052.1_g000011 Rmu_sc0002277.1_g000003 Rmu_sc0002277.1_g000006 Rmu_sc0002277.1_g000024 Rmu_sc0002658.1_g000012 Rmu_sc0003512.1_g000004 Rmu_sc0003512.1_g000007 Rmu_sc0004180.1_g000016 Rmu_sc0004180.1_g000029 Rmu_sc0004180.1_g000034 Rmu_sc0005639.1_g000008 Rmu_sc0005639.1_g000023 Rmu_sc0006070.1_g000016 Rmu_sc0006070.1_g000017 Rmu_sc0006966.1_g000021 Rmu_sc0006966.1_g000023 Rmu_sc0007239.1_g000003 Rmu_sc0008460.1_g000010 Rmu_sc0009984.1_g000008 Rmu_sc0010181.1_g000005 Rmu_sc0010181.1_g000010 Rmu_sc0010503.1_g000006 Rmu_sc0011646.1_g000003 Rmu_sc0012984.1_g000011 Rmu_sc0016972.1_g000005 Rmu_sc0016972.1_g000008 Rmu_sc0023070.1_g000003 Rmu_sc0025660.1_g000001 Rmu_ssc0000322.1_g000019
rosa_roxburghii Rroxscaffold_1G00038860 Rroxscaffold_1G00053490 Rroxscaffold_1G00053500 Rroxscaffold_1G00054230 Rroxscaffold_1G00056460 Rroxscaffold_1G00056470 Rroxscaffold_1G00056480 Rroxscaffold_1G00056500 Rroxscaffold_1G00056510 Rroxscaffold_1G00056620 Rroxscaffold_1G00056690 Rroxscaffold_1G00056710 Rroxscaffold_1G00056720 Rroxscaffold_1G00056730 Rroxscaffold_1G00056740 Rroxscaffold_1G00056750 Rroxscaffold_1G00056760 Rroxscaffold_1G00056870 Rroxscaffold_1G00056900 Rroxscaffold_1G00057120 Rroxscaffold_1G00057560 Rroxscaffold_2G00077430 Rroxscaffold_2G00102160 Rroxscaffold_3G00231420 Rroxscaffold_3G00231430 Rroxscaffold_4G00297230 Rroxscaffold_4G00331570 Rroxscaffold_6G00396700 Rroxscaffold_6G00400940 Rroxscaffold_7G00192740
rosa_rugosa Rorug01G0004400 Rorug01G0004500 Rorug02G0377600 Rorug02G0378000 Rorug02G0582800 Rorug02G0583400 Rorug03G0187000 Rorug03G0218800 Rorug04G0081200 Rorug05G0062700 Rorug05G0062700 Rorug05G0063100 Rorug05G0063200 Rorug05G0063200 Rorug05G0063200 Rorug05G0067000 Rorug05G0069700 Rorug05G0069900 Rorug05G0070000 Rorug05G0070100 Rorug05G0070300 Rorug05G0070400 Rorug05G0070600 Rorug05G0070600 Rorug05G0072300 Rorug05G0072400 Rorug05G0072500 Rorug05G0072500 Rorug05G0072600.1 Rorug05G0072700 Rorug05G0072800 Rorug05G0072800 Rorug05G0072900 Rorug05G0073000 Rorug05G0073000 Rorug05G0073400 Rorug05G0073400 Rorug05G0073400 Rorug05G0074800 Rorug05G0075000 Rorug05G0114300 Rorug05G0194200 Rorug06G0097800
rosa_samantha Rh2AG401400 Rh2CG387600 Rh2CG417000 Rh2CG637400 Rh5CG169600 Rh5CG172100 Rh5CG175200 Rh5CG317100 Rh6DG187900
rosa_wichuraiana Rw1G000750 Rw1G000790 Rw1G000820 Rw1G000860 Rw1G000880 Rw1G000910 Rw2G035180 Rw2G035200 Rw2G035240 Rw2G054370 Rw2G054380 Rw5G013570 Rw5G013580 Rw5G013590 Rw5G013910 Rw5G013980 Rw5G014110 Rw5G014120 Rw5G014280 Rw5G014310 Rw5G014400 Rw5G014420 Rw5G014440 Rw5G014460 Rw5G014480 Rw5G014500 Rw5G014520 Rw5G014530 Rw5G042390

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AarI CACCTGC 1 cut(s) 2377
Acc36I ACCTGC 3 cut(s) 917, 2377, 2580
Acc65I GGTACC 1 cut(s) 2078
AccB1I GGYRCC 1 cut(s) 2078
AccB7I CCANNNNNTGG 1 cut(s) 588
AccI GTMKAC 1 cut(s) 2204
AciI CCGC 1 cut(s) 2109
AclWI GGATC 5 cut(s) 170, 469, 506, 1070, 1767
AcoI YGGCCR 1 cut(s) 253
AcsI RAATTY 9 cut(s) 565, 673, 716, 745, 916, 1372, 1508, 2230, 2259
AcuI CTGAAG 2 cut(s) 881, 2070
AfaI GTAC 3 cut(s) 1138, 1435, 2080
AfiI CCNNNNNNNGG 1 cut(s) 588
AjiI CACGTC 2 cut(s) 143, 259
AjnI CCWGG 2 cut(s) 920, 1222
AloI GAACNNNNNNTCC 2 cut(s) 449, 481
Alw21I GWGCWC 2 cut(s) 2273, 2354
Alw26I GTCTC 5 cut(s) 133, 655, 1327, 2069, 2226
AlwI GGATC 5 cut(s) 170, 469, 506, 1070, 1767
Ama87I CYCGRG 4 cut(s) 1147, 2179, 2266, 2353
AoxI GGCC 2 cut(s) 253, 1358
ApeKI GCWGC 1 cut(s) 2372
ApoI RAATTY 9 cut(s) 565, 673, 716, 745, 916, 1372, 1508, 2230, 2259
Asp700I GAANNNNTTC 2 cut(s) 23, 569
Asp718I GGTACC 1 cut(s) 2078
AspLEI GCGC 2 cut(s) 2366, 2480
AspS9I GGNCC 7 cut(s) 858, 1151, 1295, 1358, 1378, 1837, 2183
AsuHPI GGTGA 6 cut(s) 320, 1589, 1661, 1856, 2051, 2165
AsuII TTCGAA 2 cut(s) 645, 677
AvaI CYCGRG 4 cut(s) 1147, 2179, 2266, 2353
AvaII GGWCC 6 cut(s) 858, 1151, 1295, 1378, 1837, 2183
BaeGI GKGCMC 2 cut(s) 148, 788
BalI TGGCCA 1 cut(s) 255
BanI GGYRCC 1 cut(s) 2078
Bbv12I GWGCWC 2 cut(s) 2273, 2354
BbvI GCAGC 1 cut(s) 2359
BccI CCATC 6 cut(s) 216, 446, 1013, 1127, 2136, 2375
BceAI ACGGC 1 cut(s) 1781
BciT130I CCWGG 2 cut(s) 922, 1224
BciVI GTATCC 1 cut(s) 1553
BclI TGATCA 1 cut(s) 295
BcoDI GTCTC 5 cut(s) 133, 655, 1327, 2069, 2226
BfaI CTAG 3 cut(s) 398, 633, 963
BfmI CTRYAG 1 cut(s) 107
BfuAI ACCTGC 3 cut(s) 917, 2377, 2580
BfuI GTATCC 1 cut(s) 1553
BglII AGATCT 1 cut(s) 904
BisI GCNGC 1 cut(s) 2373
BlsI GCNGC 1 cut(s) 2374
Bme1390I CCNGG 2 cut(s) 922, 1224
Bme18I GGWCC 6 cut(s) 858, 1151, 1295, 1378, 1837, 2183
BmeT110I CYCGRG 4 cut(s) 1147, 2179, 2266, 2353
BmgBI CACGTC 2 cut(s) 143, 259
BmgT120I GGNCC 7 cut(s) 858, 1151, 1295, 1358, 1378, 1837, 2183
BmiI GGNNCC 8 cut(s) 580, 859, 1152, 1153, 1359, 2080, 2184, 2334
BmrFI CCNGG 2 cut(s) 922, 1224
BmsI GCATC 2 cut(s) 1377, 2590
BpmI CTGGAG 2 cut(s) 260, 1524
Bpu10I CCTNAGC 1 cut(s) 404
Bpu14I TTCGAA 2 cut(s) 645, 677
BpuEI CTTGAG 3 cut(s) 785, 1417, 1500
BsaBI GATNNNNATC 1 cut(s) 458
BsaJI CCNNGG 4 cut(s) 921, 1222, 1840, 1896
Bsc4I CCNNNNNNNGG 1 cut(s) 588
Bse1I ACTGG 4 cut(s) 256, 1381, 1548, 1726
Bse3DI GCAATG 3 cut(s) 443, 1235, 2480
Bse8I GATNNNNATC 1 cut(s) 458
BseBI CCWGG 2 cut(s) 922, 1224
BseDI CCNNGG 4 cut(s) 921, 1222, 1840, 1896
BseGI GGATG 5 cut(s) 45, 51, 464, 815, 2386
BseJI GATNNNNATC 1 cut(s) 458
BseLI CCNNNNNNNGG 1 cut(s) 588
BseMI GCAATG 3 cut(s) 443, 1235, 2480
BseMII CTCAG 5 cut(s) 166, 556, 850, 902, 1407
BseNI ACTGG 4 cut(s) 256, 1381, 1548, 1726
BseRI GAGGAG 1 cut(s) 1501
BseSI GKGCMC 2 cut(s) 148, 788
BseXI GCAGC 1 cut(s) 2359
BseYI CCCAGC 2 cut(s) 515, 1586
BshFI GGCC 2 cut(s) 255, 1360
BshNI GGYRCC 1 cut(s) 2078
BsiHKAI GWGCWC 2 cut(s) 2273, 2354
BsiHKCI CYCGRG 4 cut(s) 1147, 2179, 2266, 2353
BslFI GGGAC 4 cut(s) 891, 1137, 1876, 2196
BslI CCNNNNNNNGG 1 cut(s) 588
BsmAI GTCTC 5 cut(s) 133, 655, 1327, 2069, 2226
BsmBI CGTCTC 1 cut(s) 133
BsmFI GGGAC 4 cut(s) 891, 1137, 1876, 2196
BsnI GGCC 2 cut(s) 255, 1360
BsoBI CYCGRG 4 cut(s) 1147, 2179, 2266, 2353
Bsp119I TTCGAA 2 cut(s) 645, 677
Bsp1286I GDGCHC 4 cut(s) 148, 788, 2273, 2354
BspACI CCGC 1 cut(s) 2109
BspANI GGCC 2 cut(s) 255, 1360
BspCNI CTCAG 5 cut(s) 165, 555, 849, 901, 1408
BspHI TCATGA 3 cut(s) 292, 298, 331
BspLI GGNNCC 8 cut(s) 580, 859, 1152, 1153, 1359, 2080, 2184, 2334
BspMAI CTGCAG 1 cut(s) 111
BspMI ACCTGC 3 cut(s) 917, 2377, 2580
BspPI GGATC 5 cut(s) 170, 469, 506, 1070, 1767
BspQI GCTCTTC 1 cut(s) 612
BspT104I TTCGAA 2 cut(s) 645, 677
BspT107I GGYRCC 1 cut(s) 2078
BsrDI GCAATG 3 cut(s) 443, 1235, 2480
BsrI ACTGG 4 cut(s) 256, 1381, 1548, 1726
BssECI CCNNGG 4 cut(s) 921, 1222, 1840, 1896
BssT1I CCWWGG 2 cut(s) 1840, 1896
Bst2UI CCWGG 2 cut(s) 922, 1224
Bst4CI ACNGT 3 cut(s) 778, 1407, 2569
Bst6I CTCTTC 4 cut(s) 129, 306, 612, 1685
BstAPI GCANNNNNTGC 1 cut(s) 2372
BstBI TTCGAA 2 cut(s) 645, 677
BstC8I GCNNGC 2 cut(s) 188, 327
BstDEI CTNAG 7 cut(s) 152, 404, 542, 557, 836, 888, 1416
BstF5I GGATG 5 cut(s) 45, 51, 464, 815, 2386
BstHHI GCGC 2 cut(s) 2366, 2480
BstMAI GTCTC 5 cut(s) 133, 655, 1327, 2069, 2226
BstMWI GCNNNNNNNGC 2 cut(s) 1237, 2372
BstNI CCWGG 2 cut(s) 922, 1224
BstNSI RCATGY 1 cut(s) 739
BstSCI CCNGG 2 cut(s) 920, 1222
BstSFI CTRYAG 1 cut(s) 107
BstSLI GKGCMC 2 cut(s) 148, 788
BstV1I GCAGC 1 cut(s) 2359
BstX2I RGATCY 2 cut(s) 904, 1075
BstXI CCANNNNNNTGG 1 cut(s) 1594
BstYI RGATCY 2 cut(s) 904, 1075
BsuI GTATCC 1 cut(s) 1553
BsuRI GGCC 2 cut(s) 255, 1360
BtgZI GCGATG 1 cut(s) 2155
BtrI CACGTC 2 cut(s) 143, 259
BtsCI GGATG 5 cut(s) 45, 51, 464, 815, 2386
BtsIMutI CAGTG 4 cut(s) 774, 1719, 1792, 2574
BveI ACCTGC 3 cut(s) 917, 2377, 2580
Cac8I GCNNGC 2 cut(s) 188, 327
CciI TCATGA 3 cut(s) 292, 298, 331
CfoI GCGC 2 cut(s) 2366, 2480
Cfr13I GGNCC 7 cut(s) 858, 1151, 1295, 1358, 1378, 1837, 2183
Csp6I GTAC 3 cut(s) 1137, 1434, 2079
CviQI GTAC 3 cut(s) 1137, 1434, 2079
DdeI CTNAG 7 cut(s) 152, 404, 542, 557, 836, 888, 1416
DraI TTTAAA 1 cut(s) 160
EaeI YGGCCR 1 cut(s) 253
Eam1104I CTCTTC 4 cut(s) 129, 306, 612, 1685
EarI CTCTTC 4 cut(s) 129, 306, 612, 1685
Eco130I CCWWGG 2 cut(s) 1840, 1896
Eco32I GATATC 1 cut(s) 1743
Eco47I GGWCC 6 cut(s) 858, 1151, 1295, 1378, 1837, 2183
Eco57I CTGAAG 2 cut(s) 881, 2070
Eco88I CYCGRG 4 cut(s) 1147, 2179, 2266, 2353
EcoO109I RGGNCCY 1 cut(s) 1151
EcoRI GAATTC 4 cut(s) 565, 916, 1508, 2259
EcoRII CCWGG 2 cut(s) 920, 1222
EcoRV GATATC 1 cut(s) 1743
EcoT14I CCWWGG 2 cut(s) 1840, 1896
EcoT22I ATGCAT 1 cut(s) 128
ErhI CCWWGG 2 cut(s) 1840, 1896
Esp3I CGTCTC 1 cut(s) 133
FalI AAGNNNNNCTT 3 cut(s) 1717, 1749, 2578
FaqI GGGAC 4 cut(s) 891, 1137, 1876, 2196
FauNDI CATATG 1 cut(s) 849
FbaI TGATCA 1 cut(s) 295
FblI GTMKAC 1 cut(s) 2204
Fnu4HI GCNGC 1 cut(s) 2373
FokI GGATG 5 cut(s) 32, 38, 451, 802, 2393
Fsp4HI GCNGC 1 cut(s) 2373
FspBI CTAG 3 cut(s) 398, 633, 963
GlaI GCGC 2 cut(s) 2365, 2479
GluI GCNGC 1 cut(s) 2373
GsaI CCCAGC 2 cut(s) 519, 1590
GsuI CTGGAG 2 cut(s) 260, 1524
HaeIII GGCC 2 cut(s) 255, 1360
HhaI GCGC 2 cut(s) 2366, 2480
Hin6I GCGC 2 cut(s) 2364, 2478
HinP1I GCGC 2 cut(s) 2364, 2478
HindIII AAGCTT 3 cut(s) 1229, 1906, 2417
HphI GGTGA 6 cut(s) 320, 1589, 1661, 1856, 2051, 2165
Hpy166II GTNNAC 3 cut(s) 67, 1652, 2205
Hpy188I TCNGA 6 cut(s) 545, 660, 913, 1162, 1417, 1750
Hpy8I GTNNAC 3 cut(s) 67, 1652, 2205
Hpy99I CGWCG 1 cut(s) 263
HpyCH4III ACNGT 3 cut(s) 778, 1407, 2569
HpyCH4IV ACGT 4 cut(s) 142, 258, 1917, 1952
HpyF10VI GCNNNNNNNGC 2 cut(s) 1237, 2372
HpyF3I CTNAG 7 cut(s) 152, 404, 542, 557, 836, 888, 1416
HpySE526I ACGT 4 cut(s) 142, 258, 1917, 1952
HspAI GCGC 2 cut(s) 2364, 2478
KflI GGGWCCC 1 cut(s) 1151
KpnI GGTACC 1 cut(s) 2082
Ksp22I TGATCA 1 cut(s) 295
LguI GCTCTTC 1 cut(s) 612
LmnI GCTCC 2 cut(s) 1036, 1533
Lsp1109I GCAGC 1 cut(s) 2359
LweI GCATC 2 cut(s) 1377, 2590
MaeI CTAG 3 cut(s) 398, 633, 963
MaeII ACGT 4 cut(s) 142, 258, 1917, 1952
MaeIII GTNAC 5 cut(s) 206, 486, 1123, 1844, 1922
MfeI CAATTG 2 cut(s) 1050, 1496
MflI RGATCY 2 cut(s) 904, 1075
MhlI GDGCHC 4 cut(s) 148, 788, 2273, 2354
MlsI TGGCCA 1 cut(s) 255
MluNI TGGCCA 1 cut(s) 255
MlyI GAGTC 6 cut(s) 657, 776, 806, 980, 1285, 1534
MmeI TCCRAC 6 cut(s) 297, 795, 1800, 1938, 2050, 2127
Mox20I TGGCCA 1 cut(s) 255
Mph1103I ATGCAT 1 cut(s) 128
MroXI GAANNNNTTC 2 cut(s) 23, 569
MscI TGGCCA 1 cut(s) 255
MseI TTAA 8 cut(s) 159, 380, 528, 759, 2105, 2210, 2552, 2605
MslI CAYNNNNRTG 5 cut(s) 291, 297, 852, 1955, 2323
Msp20I TGGCCA 1 cut(s) 255
MspA1I CMGCKG 1 cut(s) 519
MspR9I CCNGG 2 cut(s) 922, 1224
MunI CAATTG 2 cut(s) 1050, 1496
MvaI CCWGG 2 cut(s) 922, 1224
MwoI GCNNNNNNNGC 2 cut(s) 1237, 2372
NdeI CATATG 1 cut(s) 849
NlaIV GGNNCC 8 cut(s) 580, 859, 1152, 1153, 1359, 2080, 2184, 2334
NmuCI GTSAC 3 cut(s) 206, 486, 1844
NsiI ATGCAT 1 cut(s) 128
NspI RCATGY 1 cut(s) 739
NspV TTCGAA 2 cut(s) 645, 677
PaeR7I CTCGAG 1 cut(s) 2266
PagI TCATGA 3 cut(s) 292, 298, 331
PaqCI CACCTGC 1 cut(s) 2377
PciSI GCTCTTC 1 cut(s) 612
PcsI WCGNNNNNNNCGW 1 cut(s) 2581
PdmI GAANNNNTTC 2 cut(s) 23, 569
PfeI GAWTC 6 cut(s) 941, 1716, 2098, 2116, 2188, 2294
PflMI CCANNNNNTGG 1 cut(s) 588
PkrI GCNGC 1 cut(s) 2374
PleI GAGTC 6 cut(s) 657, 775, 805, 979, 1284, 1533
PpsI GAGTC 6 cut(s) 657, 775, 805, 979, 1284, 1533
PpuMI RGGWCCY 1 cut(s) 1151
Psp5II RGGWCCY 1 cut(s) 1151
Psp6I CCWGG 2 cut(s) 920, 1222
PspFI CCCAGC 2 cut(s) 515, 1586
PspGI CCWGG 2 cut(s) 920, 1222
PspN4I GGNNCC 8 cut(s) 580, 859, 1152, 1153, 1359, 2080, 2184, 2334
PspPI GGNCC 7 cut(s) 858, 1151, 1295, 1358, 1378, 1837, 2183
PspPPI RGGWCCY 1 cut(s) 1151
PspXI VCTCGAGB 1 cut(s) 2266
PstI CTGCAG 1 cut(s) 111
PsuI RGATCY 2 cut(s) 904, 1075
PvuII CAGCTG 1 cut(s) 519
RsaI GTAC 3 cut(s) 1138, 1435, 2080
RsaNI GTAC 3 cut(s) 1137, 1434, 2079
RseI CAYNNNNRTG 5 cut(s) 291, 297, 852, 1955, 2323
SapI GCTCTTC 1 cut(s) 612
SaqAI TTAA 8 cut(s) 159, 380, 528, 759, 2105, 2210, 2552, 2605
SatI GCNGC 1 cut(s) 2373
Sau96I GGNCC 7 cut(s) 858, 1151, 1295, 1358, 1378, 1837, 2183
SchI GAGTC 6 cut(s) 657, 776, 806, 980, 1285, 1534
ScrFI CCNGG 2 cut(s) 922, 1224
SduI GDGCHC 4 cut(s) 148, 788, 2273, 2354
SfaNI GCATC 2 cut(s) 1377, 2590
SfcI CTRYAG 1 cut(s) 107
Sfr274I CTCGAG 1 cut(s) 2266
SfuI TTCGAA 2 cut(s) 645, 677
SinI GGWCC 6 cut(s) 858, 1151, 1295, 1378, 1837, 2183
SlaI CTCGAG 1 cut(s) 2266
SmiMI CAYNNNNRTG 5 cut(s) 291, 297, 852, 1955, 2323
SmlI CTYRAG 4 cut(s) 764, 1396, 1515, 2266
SmoI CTYRAG 4 cut(s) 764, 1396, 1515, 2266
SsiI CCGC 1 cut(s) 2109
SspMI CTAG 3 cut(s) 398, 633, 963
StyD4I CCNGG 2 cut(s) 920, 1222
StyI CCWWGG 2 cut(s) 1840, 1896
TaaI ACNGT 3 cut(s) 778, 1407, 2569
TaiI ACGT 4 cut(s) 145, 261, 1920, 1955
TaqII GACCGA 1 cut(s) 2200
TatI WGTACW 1 cut(s) 1136
TfiI GAWTC 6 cut(s) 941, 1716, 2098, 2116, 2188, 2294
Tru1I TTAA 8 cut(s) 159, 380, 528, 759, 2105, 2210, 2552, 2605
Tru9I TTAA 8 cut(s) 159, 380, 528, 759, 2105, 2210, 2552, 2605
TscAI CASTG 4 cut(s) 781, 1726, 1792, 2574
TseFI GTSAC 3 cut(s) 206, 486, 1844
TseI GCWGC 1 cut(s) 2372
Tsp45I GTSAC 3 cut(s) 206, 486, 1844
TspGWI ACGGA 2 cut(s) 850, 1068
TspRI CASTG 4 cut(s) 781, 1726, 1792, 2574
Van91I CCANNNNNTGG 1 cut(s) 588
VpaK11BI GGWCC 6 cut(s) 858, 1151, 1295, 1378, 1837, 2183
XapI RAATTY 9 cut(s) 565, 673, 716, 745, 916, 1372, 1508, 2230, 2259
XceI RCATGY 1 cut(s) 739
XhoI CTCGAG 1 cut(s) 2266
XmiI GTMKAC 1 cut(s) 2204
XmnI GAANNNNTTC 2 cut(s) 23, 569
XspI CTAG 3 cut(s) 398, 633, 963
Zsp2I ATGCAT 1 cut(s) 128
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.