Rmu_sc0002658.1_g000012

LRR receptor-like serine threonine-protein kinase

Basic Information

Type: gene
Biological Identity
rosa_multiflora
Rmu_sc0002658.1
Physical Location & Seq
Reverse (-)
48253 .. 51216
2964 bp
Loading structure...
UTR
Exon/CDS
Intron
Rmu_sc0002658.1_g000012.1.cds

Sequence Viewer

Length: 2964 bp
atggatagttctgcaaactttcccaaccctgtctatcatttcaatattgctctctgtttcctcttgtttttaggctcttcatgcctaaacactagtgaactctgcttgggagatggccttccagttgtgaaatgcatcgacacagagagaagcgcgcttctcatctttaaggcagatcttatcgatgctttgggtaggctatcatcttgggagggtcaaaattgttgtcaatggaaagggatttcatgcaacaaccgcactggtcatgttgaaaagatggacctccgcaatacaagtccagctccatctattgatgctgaagaccaggagtttgaggcttatgaagagtcctttttggggggtaagataaatccttctttgcttagcttgaaatatatgagttacttagacttgagctcgaatggctttcaagggcttcaaattcctaagttctttggtcatcttaaaagtctgaagtatctcaatgtctcatcttcatcttttgagggacagattccaccacatcttggtaacctatcaaacttgaactatcttgacctcagtggtaactatttattggaaatttcttccataaatttgcattggctttctcatctcttctctctaaaatacctcagtctgactgaagtggaccttagcaatgcaggagccagttggctacatgttgttaacatgcttccttccatgctagagttacacttgtctagatgcaacattgaaagccttccaccttcacttcacaccatgaacctcacatcacttttgatccttgatatgtcatacaatgattttaagttcccatttccaaagtgggtctttaatctaactagcctcagagaacttcacttggcccagaattctttcagcggtccctttcccaatgatttcgttaacctgaaatcattggaagaacttgatttatctcttaatggtcttcacggtcgaattcccaaattctttggaaatctttgcaacctaaagaccttaattcttgcgggaaacgcatttgatcagggtattccagagtttttggatggtttatcaggttgtgcaaataataagttggagtcactagacttgtctagtaatatgctggtaggcgaattgcctgcctccttagggatgctcccccatttgcagtaccttaacctcttcgacaatcatttgaatggatccatcccagaaagtttgggacgactctctgagctagtttatctagacctgtcgggcaactcattggtaggctttttaactgaagcccatttcatagatctcgcaaagttaaaatacattgcgcagggcaatatcagtgtccccaacccgctaccttccatcattttcaatgtgtcttatgagtgggttcctcctttcaagcttgacaccatttacatcaggaactgtcaagtaggtcctgccttttcactatggcttctatctcaaactgaactagtatatgtctctctaaggaatacaggcatcttggattccataccagaggaatggttcgtgaaaatatcttcccaagtccaatatttggatttatcttacaaccaaattcatggaaagcttccagtccatctgatagttccaaatttagtgactctagatttgagacataatcaattatatggctcactcccgctttggttgtgtaaggaggcttactacctaaatcttgctagcaattcattttgtgggccaattccgttaacttttgaccaacattttccaaatttgcaacaactgcatctctttgaaaattatttgaatggcacgattccatcctctgttttcaatatgcagaagttgttagtcttttctataagaagcaacaacatttctggagagttccctcaagcatggagtatgtggagtgacatatacattgtagatgttggagacaatcatctctcaggaaatattcccagttcaatgggtatcccaagttcactttacatgttgtcgatgaagaacaacaaattcgatggtgaaatcccgatggccttgggaaattgcaccaaactgaggagtattgatcttggcggtaatagatttactggaaacctaccttcatggataggaacaaatgtatccaaggtgtttatcttacggctgccatccaattctctaagcggacatattccccaacaattgtgcaatcttgaccaacttcacctcctagatcttggtcataaccacctctcaggtactataccaaagtgtttgaataatatgactgctctaacagatgtcaagttcaatgcttatcccttatatcaggcgtatgaacaacaaataatggtgaccaaaggaagagaattccaatataacaagactctgaggtgggtaaaaagcatagatctttcctcaaatagtttggaaggtgaaatccctgaaaaaatatgcagtctcttcgcattggttatcttgaacttgtcgatgaatcatctaagtggaaatattccctcgaaaattggaaacttgcggtcgctcgaattccttgatctctcagtcaaccacctttcgggacgaattcctcaaagtatttcatctttaacctatttgtctcacttgaatttgtcttacaatgaattgagcggaagaattcctttgggcaaccaacttcaagcacttgatgattcaaccaatatttatgggggcaatccatcactctgtgggtttccccttttaaacaagtgcccaggagatgacacacctccacaacccacttttcctcttgggaaaagacatgaagatgataaaaagcttggtttctacatcagtgtagtgctcggctttgtcgtaggcttttggggtgtttgtggcacattactcataaagaagtcatggaggtatgcctactttcaattttttgatagcatccaagacaaggtagcggtggcagttgcattgaaaatagcccatttccagaggaaaatttaa

Protein Analysis

987

Amino Acids

110.24

Weight (kDa)

5.93

Isoelectric Point (pI)

38.3

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready

Orthologous Genes (Group: OG0000048)

Species Orthologous Gene IDs
arabidopsis_thaliana AT2G34930
fragaria_vesca FvH4_3g12670 FvH4_3g12672 FvH4_3g12740 FvH4_3g12742 FvH4_3g12770 FvH4_3g12770 FvH4_3g12860 FvH4_3g12890 FvH4_3g13431 FvH4_3g13433 FvH4_3g13435 FvH4_3g13470 FvH4_3g13470 FvH4_3g13480 FvH4_3g13562 FvH4_3g13580 FvH4_3g13600 FvH4_3g13600 FvH4_3g13600 FvH4_3g13600 FvH4_3g13600 FvH4_3g13600 FvH4_3g13610 FvH4_3g13620 FvH4_3g13620 FvH4_3g23240 FvH4_3g32910 FvH4_3g35070 FvH4_3g45520 FvH4_5g08430 FvH4_5g08450 FvH4_6g53230 FvH4_6g53300
malus_domestica MD05G1217600.v1.1 MD05G1217700.v1.1 MD05G1224700.v1.1 MD05G1225100.v1.1 MD05G1225300.v1.1 MD05G1225400.v1.1 MD05G1235900.v1.1 MD05G1236100.v1.1 MD05G1236300.v1.1 MD05G1237200.v1.1 MD05G1241600.v1.1 MD05G1245700.v1.1 MD05G1245800.v1.1 MD05G1245900.v1.1 MD05G1246000.v1.1 MD05G1246100.v1.1 MD05G1246300.v1.1 MD05G1246400.v1.1 MD05G1246500.v1.1 MD05G1248100.v1.1 MD05G1248200.v1.1 MD05G1264300.v1.1 MD05G1275900.v1.1 MD07G1051400.v1.1 MD09G1012600.v1.1 MD09G1012700.v1.1 MD09G1012800.v1.1 MD10G1221400.v1.1 MD10G1221500.v1.1 MD10G1221600.v1.1 MD10G1221900.v1.1 MD10G1222200.v1.1 MD10G1222400.v1.1 MD10G1222500.v1.1 MD10G1222900.v1.1 MD10G1223000.v1.1 MD10G1223100.v1.1 MD10G1223500.v1.1 MD10G1228000.v1.1 MD12G1019600.v1.1 MD12G1020000.v1.1 MD12G1020100.v1.1 MD17G1013200.v1.1 MD17G1013300.v1.1 MD17G1013400.v1.1
prunus_persica Prupe.1G060500_v2.0.a1 Prupe.1G100100_v2.0.a1 Prupe.3G124000_v2.0.a1 Prupe.3G304400_v2.0.a1 Prupe.4G116800_v2.0.a1 Prupe.4G116900_v2.0.a1 Prupe.4G117000_v2.0.a1 Prupe.4G121800_v2.0.a1 Prupe.4G121900_v2.0.a1 Prupe.4G122000_v2.0.a1 Prupe.4G122100_v2.0.a1 Prupe.4G122200_v2.0.a1 Prupe.4G122300_v2.0.a1 Prupe.4G122500_v2.0.a1 Prupe.4G122600_v2.0.a1 Prupe.4G122800_v2.0.a1 Prupe.4G122900_v2.0.a1 Prupe.4G123000_v2.0.a1 Prupe.4G123100_v2.0.a1 Prupe.4G123200_v2.0.a1 Prupe.4G131500_v2.0.a1 Prupe.4G131600_v2.0.a1 Prupe.7G032500_v2.0.a1 Prupe.7G032900_v2.0.a1 Prupe.7G033000_v2.0.a1 Prupe.7G033100_v2.0.a1 Prupe.7G033300_v2.0.a1 Prupe.7G033600_v2.0.a1 Prupe.7G034600_v2.0.a1 Prupe.7G040200_v2.0.a1 Prupe.7G059200_v2.0.a1
pyrus_communis pycom05g20580 pycom05g20590 pycom05g20760 pycom05g20800 pycom05g21280 pycom05g21290 pycom05g21820 pycom05g21830 pycom05g22180 pycom05g22190 pycom05g22210 pycom05g22450 pycom05g22460 pycom05g22470 pycom05g22480 pycom05g22490 pycom05g23770 pycom05g23780 pycom05g24050 pycom05g24060 pycom07g03910 pycom10g18700 pycom10g18720 pycom10g18730 pycom10g18740 pycom10g19150 pycom111g01060 pycom12g01660 pycom12g01690 pycom12g01720 pycom12g01740 pycom12g01750 pycom12g01770 pycom12g01810 pycom12g01820 pycom12g01830 pycom12g01840 pycom12g01870 pycom12g01900 pycom17g01060 pycom17g01070
rosa_chinensis RchiOBHm_Chr1g0315041 RchiOBHm_Chr1g0315051 RchiOBHm_Chr1g0315071 RchiOBHm_Chr1g0315161 RchiOBHm_Chr1g0315211 RchiOBHm_Chr1g0315251 RchiOBHm_Chr1g0315321 RchiOBHm_Chr1g0315391 RchiOBHm_Chr1g0315451 RchiOBHm_Chr1g0315481 RchiOBHm_Chr1g0315551 RchiOBHm_Chr1g0315601 RchiOBHm_Chr1g0315621 RchiOBHm_Chr1g0359221 RchiOBHm_Chr2g0142981 RchiOBHm_Chr2g0143001 RchiOBHm_Chr2g0143061 RchiOBHm_Chr2g0143091 RchiOBHm_Chr2g0175321 RchiOBHm_Chr2g0175341 RchiOBHm_Chr2g0175361 RchiOBHm_Chr2g0175371 RchiOBHm_Chr3g0470491 RchiOBHm_Chr3g0480881 RchiOBHm_Chr3g0485511 RchiOBHm_Chr5g0020741 RchiOBHm_Chr5g0020901 RchiOBHm_Chr5g0020931 RchiOBHm_Chr5g0020941 RchiOBHm_Chr5g0020961 RchiOBHm_Chr5g0020971 RchiOBHm_Chr5g0021451 RchiOBHm_Chr5g0021531 RchiOBHm_Chr5g0021831 RchiOBHm_Chr5g0021841 RchiOBHm_Chr5g0021931 RchiOBHm_Chr5g0021941 RchiOBHm_Chr5g0021981 RchiOBHm_Chr5g0021991 RchiOBHm_Chr5g0022011 RchiOBHm_Chr5g0022181 RchiOBHm_Chr5g0022191 RchiOBHm_Chr5g0022211 RchiOBHm_Chr5g0022221 RchiOBHm_Chr5g0022231 RchiOBHm_Chr5g0022291 RchiOBHm_Chr5g0022301 RchiOBHm_Chr5g0022331 RchiOBHm_Chr5g0022361 RchiOBHm_Chr5g0022371 RchiOBHm_Chr5g0022381 RchiOBHm_Chr5g0022401 RchiOBHm_Chr5g0022431 RchiOBHm_Chr5g0022451 RchiOBHm_Chr5g0022541 RchiOBHm_Chr5g0022591 RchiOBHm_Chr5g0022601 RchiOBHm_Chr5g0022701 RchiOBHm_Chr5g0022741 RchiOBHm_Chr5g0022791 RchiOBHm_Chr5g0022811 RchiOBHm_Chr5g0022851 RchiOBHm_Chr5g0029441 RchiOBHm_Chr5g0041631 RchiOBHm_Chr5g0069391 RchiOBHm_Chr6g0273811 RchiOBHm_Chr6g0273831 RchiOBHm_Chr6g0275331 RchiOBHm_Chr7g0219061
rosa_laevigata RLG00000002463 RLG00000020007 RLG00000020008 RLG00000022320 RLG00000022321 RLG00000023446 RLG00000030742 RLG00000030743 RLG00000030747 RLG00000032557 RLG00000032564 RLG00000032571 RLG00000032573 RLG00000032574 RLG00000032612 RLG00000032633 RLG00000032636 RLG00000032638 RLG00000032650 RLG00000032651 RLG00000032652 RLG00000032653 RLG00000032655 RLG00000032673 RLG00000032678 RLG00000032769 RLG00000032857 RLG00000033168 RLG00000033465 RLG00000034086 RLG00000034222 RLG00000035290
rosa_multiflora Rmu_co8143358.1_g000001 Rmu_co8518791.1_g000001 Rmu_sc0000178.1_g000008 Rmu_sc0000178.1_g000014 Rmu_sc0000401.1_g000005 Rmu_sc0000401.1_g000013 Rmu_sc0000401.1_g000017 Rmu_sc0000401.1_g000018 Rmu_sc0000401.1_g000024 Rmu_sc0000401.1_g000025 Rmu_sc0000576.1_g000020 Rmu_sc0001585.1_g000003 Rmu_sc0001585.1_g000005 Rmu_sc0001585.1_g000008 Rmu_sc0001784.1_g000006 Rmu_sc0001784.1_g000011 Rmu_sc0001784.1_g000022 Rmu_sc0001784.1_g000028 Rmu_sc0002052.1_g000004 Rmu_sc0002052.1_g000011 Rmu_sc0002277.1_g000003 Rmu_sc0002277.1_g000006 Rmu_sc0002277.1_g000024 Rmu_sc0002658.1_g000012 Rmu_sc0003512.1_g000004 Rmu_sc0003512.1_g000007 Rmu_sc0004180.1_g000016 Rmu_sc0004180.1_g000029 Rmu_sc0004180.1_g000034 Rmu_sc0005639.1_g000008 Rmu_sc0005639.1_g000023 Rmu_sc0006070.1_g000016 Rmu_sc0006070.1_g000017 Rmu_sc0006966.1_g000021 Rmu_sc0006966.1_g000023 Rmu_sc0007239.1_g000003 Rmu_sc0008460.1_g000010 Rmu_sc0009984.1_g000008 Rmu_sc0010181.1_g000005 Rmu_sc0010181.1_g000010 Rmu_sc0010503.1_g000006 Rmu_sc0011646.1_g000003 Rmu_sc0012984.1_g000011 Rmu_sc0016972.1_g000005 Rmu_sc0016972.1_g000008 Rmu_sc0023070.1_g000003 Rmu_sc0025660.1_g000001 Rmu_ssc0000322.1_g000019
rosa_roxburghii Rroxscaffold_1G00038860 Rroxscaffold_1G00053490 Rroxscaffold_1G00053500 Rroxscaffold_1G00054230 Rroxscaffold_1G00056460 Rroxscaffold_1G00056470 Rroxscaffold_1G00056480 Rroxscaffold_1G00056500 Rroxscaffold_1G00056510 Rroxscaffold_1G00056620 Rroxscaffold_1G00056690 Rroxscaffold_1G00056710 Rroxscaffold_1G00056720 Rroxscaffold_1G00056730 Rroxscaffold_1G00056740 Rroxscaffold_1G00056750 Rroxscaffold_1G00056760 Rroxscaffold_1G00056870 Rroxscaffold_1G00056900 Rroxscaffold_1G00057120 Rroxscaffold_1G00057560 Rroxscaffold_2G00077430 Rroxscaffold_2G00102160 Rroxscaffold_3G00231420 Rroxscaffold_3G00231430 Rroxscaffold_4G00297230 Rroxscaffold_4G00331570 Rroxscaffold_6G00396700 Rroxscaffold_6G00400940 Rroxscaffold_7G00192740
rosa_rugosa Rorug01G0004400 Rorug01G0004500 Rorug02G0377600 Rorug02G0378000 Rorug02G0582800 Rorug02G0583400 Rorug03G0187000 Rorug03G0218800 Rorug04G0081200 Rorug05G0062700 Rorug05G0062700 Rorug05G0063100 Rorug05G0063200 Rorug05G0063200 Rorug05G0063200 Rorug05G0067000 Rorug05G0069700 Rorug05G0069900 Rorug05G0070000 Rorug05G0070100 Rorug05G0070300 Rorug05G0070400 Rorug05G0070600 Rorug05G0070600 Rorug05G0072300 Rorug05G0072400 Rorug05G0072500 Rorug05G0072500 Rorug05G0072600.1 Rorug05G0072700 Rorug05G0072800 Rorug05G0072800 Rorug05G0072900 Rorug05G0073000 Rorug05G0073000 Rorug05G0073400 Rorug05G0073400 Rorug05G0073400 Rorug05G0074800 Rorug05G0075000 Rorug05G0114300 Rorug05G0194200 Rorug06G0097800
rosa_samantha Rh2AG401400 Rh2CG387600 Rh2CG417000 Rh2CG637400 Rh5CG169600 Rh5CG172100 Rh5CG175200 Rh5CG317100 Rh6DG187900
rosa_wichuraiana Rw1G000750 Rw1G000790 Rw1G000820 Rw1G000860 Rw1G000880 Rw1G000910 Rw2G035180 Rw2G035200 Rw2G035240 Rw2G054370 Rw2G054380 Rw5G013570 Rw5G013580 Rw5G013590 Rw5G013910 Rw5G013980 Rw5G014110 Rw5G014120 Rw5G014280 Rw5G014310 Rw5G014400 Rw5G014420 Rw5G014440 Rw5G014460 Rw5G014480 Rw5G014500 Rw5G014520 Rw5G014530 Rw5G042390

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
Acc16I TGCGCA 1 cut(s) 1317
AccB7I CCANNNNNTGG 2 cut(s) 527, 1555
AccBSI CCGCTC 1 cut(s) 2619
AccII CGCG 1 cut(s) 155
AclWI GGATC 3 cut(s) 781, 1188, 1201
AcuI CTGAAG 4 cut(s) 339, 494, 666, 1296
AdeI CACNNNGTG 1 cut(s) 2696
AfaI GTAC 2 cut(s) 1163, 2230
AfiI CCNNNNNNNGG 7 cut(s) 357, 527, 1140, 1555, 2046, 2545, 2911
AflIII ACRYGT 2 cut(s) 682, 1977
AhlI ACTAGT 2 cut(s) 92, 1468
AjnI CCWGG 2 cut(s) 324, 2722
AluBI AGCT 7 cut(s) 302, 387, 417, 1228, 1396, 1588, 2788
AluI AGCT 7 cut(s) 302, 387, 417, 1228, 1396, 1588, 2788
Alw21I GWGCWC 2 cut(s) 419, 2814
Alw26I GTCTC 6 cut(s) 493, 1483, 1627, 1914, 2435, 2592
AlwI GGATC 3 cut(s) 781, 1188, 1201
AlwNI CAGNNNCTG 1 cut(s) 1419
AoxI GGCC 4 cut(s) 115, 870, 1718, 2022
ApeKI GCWGC 1 cut(s) 2134
ArsI GACNNNNNNTTYG 6 cut(s) 211, 243, 314, 346, 1612, 1644
Asp700I GAANNNNTTC 2 cut(s) 744, 881
AspLEI GCGC 3 cut(s) 155, 157, 1318
AspS9I GGNCC 6 cut(s) 280, 652, 871, 890, 1430, 1718
AsuHPI GGTGA 4 cut(s) 2021, 2186, 2335, 2417
AsuNHI GCTAGC 1 cut(s) 1700
AvaII GGWCC 4 cut(s) 280, 652, 890, 1430
AxyI CCTNAGG 1 cut(s) 1138
BaeGI GKGCMC 1 cut(s) 2723
BaeI ACNNNNGTAYC 2 cut(s) 2094, 2127
BamHI GGATCC 1 cut(s) 1193
BanII GRGCYC 1 cut(s) 419
BbsI GAAGAC 2 cut(s) 327, 947
Bbv12I GWGCWC 2 cut(s) 419, 2814
BbvI GCAGC 1 cut(s) 2121
BceAI ACGGC 1 cut(s) 2147
BcgI CGANNNNNNTGC 4 cut(s) 1112, 1146, 2416, 2450
BciT130I CCWGG 2 cut(s) 326, 2724
BciVI GTATCC 2 cut(s) 1970, 2122
BclI TGATCA 1 cut(s) 1030
BcoDI GTCTC 6 cut(s) 493, 1483, 1627, 1914, 2435, 2592
BcuI ACTAGT 2 cut(s) 92, 1468
BfuI GTATCC 2 cut(s) 1970, 2122
BglII AGATCT 4 cut(s) 175, 1291, 2203, 2380
BisI GCNGC 1 cut(s) 2135
BlpI GCTNAGC 1 cut(s) 383
BlsI GCNGC 1 cut(s) 2136
Bme1390I CCNGG 2 cut(s) 326, 2724
Bme18I GGWCC 4 cut(s) 280, 652, 890, 1430
BmgT120I GGNCC 6 cut(s) 280, 652, 871, 890, 1430, 1718
BmiI GGNNCC 4 cut(s) 670, 892, 1195, 1383
BmrFI CCNGG 2 cut(s) 326, 2724
BmrI ACTGGG 1 cut(s) 1941
BmsI GCATC 8 cut(s) 144, 175, 304, 719, 1134, 1506, 1777, 2910
BmtI GCTAGC 1 cut(s) 1704
BmuI ACTGGG 1 cut(s) 1941
BpiI GAAGAC 2 cut(s) 327, 947
BpmI CTGGAG 1 cut(s) 1884
Bpu10I CCTNAGC 1 cut(s) 656
Bpu1102I GCTNAGC 1 cut(s) 383
BpuEI CTTGAG 2 cut(s) 433, 1860
Bsa29I ATCGAT 1 cut(s) 183
BsaJI CCNNGG 3 cut(s) 2025, 2115, 2722
BsaXI ACNNNNNCTCC 2 cut(s) 2181, 2211
Bsc4I CCNNNNNNNGG 7 cut(s) 357, 527, 1140, 1555, 2046, 2545, 2911
Bse1I ACTGG 6 cut(s) 122, 265, 672, 1592, 1947, 2083
Bse21I CCTNAGG 1 cut(s) 1138
Bse3DI GCAATG 2 cut(s) 667, 1311
BseBI CCWGG 2 cut(s) 326, 2724
BseCI ATCGAT 1 cut(s) 183
BseDI CCNNGG 3 cut(s) 2025, 2115, 2722
BseGI GGATG 6 cut(s) 1060, 1149, 1197, 1802, 2138, 2901
BseLI CCNNNNNNNGG 7 cut(s) 357, 527, 1140, 1555, 2046, 2545, 2911
BseMI GCAATG 2 cut(s) 667, 1311
BseMII CTCAG 9 cut(s) 574, 649, 868, 1215, 1947, 2036, 2238, 2351, 2544
BseNI ACTGG 6 cut(s) 122, 265, 672, 1592, 1947, 2083
BsePI GCGCGC 1 cut(s) 153
BseRI GAGGAG 1 cut(s) 2062
BseSI GKGCMC 1 cut(s) 2723
BseXI GCAGC 1 cut(s) 2121
Bsh1236I CGCG 1 cut(s) 155
Bsh1285I CGRYCG 2 cut(s) 964, 2510
BshFI GGCC 4 cut(s) 117, 872, 1720, 2024
BshVI ATCGAT 1 cut(s) 183
BsiEI CGRYCG 2 cut(s) 964, 2510
BsiHKAI GWGCWC 2 cut(s) 419, 2814
BslFI GGGAC 5 cut(s) 522, 876, 1227, 1319, 2562
BslI CCNNNNNNNGG 7 cut(s) 357, 527, 1140, 1555, 2046, 2545, 2911
BsmAI GTCTC 6 cut(s) 493, 1483, 1627, 1914, 2435, 2592
BsmFI GGGAC 5 cut(s) 522, 876, 1227, 1319, 2562
BsnI GGCC 4 cut(s) 117, 872, 1720, 2024
Bsp1286I GDGCHC 3 cut(s) 419, 2723, 2814
Bsp143I GATC 9 cut(s) 175, 786, 1030, 1193, 1291, 2056, 2203, 2380, 2524
Bsp1720I GCTNAGC 1 cut(s) 383
BspANI GGCC 4 cut(s) 117, 872, 1720, 2024
BspCNI CTCAG 9 cut(s) 573, 648, 867, 1216, 1946, 2037, 2237, 2352, 2543
BspDI ATCGAT 1 cut(s) 183
BspFNI CGCG 1 cut(s) 155
BspLI GGNNCC 4 cut(s) 670, 892, 1195, 1383
BspOI GCTAGC 1 cut(s) 1704
BspPI GGATC 3 cut(s) 781, 1188, 1201
BspQI GCTCTTC 1 cut(s) 82
BsrBI CCGCTC 1 cut(s) 2619
BsrDI GCAATG 2 cut(s) 667, 1311
BsrI ACTGG 6 cut(s) 122, 265, 672, 1592, 1947, 2083
BssECI CCNNGG 3 cut(s) 2025, 2115, 2722
BssHII GCGCGC 1 cut(s) 153
BssMI GATC 9 cut(s) 175, 786, 1030, 1193, 1291, 2056, 2203, 2380, 2524
BssT1I CCWWGG 2 cut(s) 2025, 2115
Bst2UI CCWGG 2 cut(s) 326, 2724
Bst4CI ACNGT 2 cut(s) 962, 1421
Bst6I CTCTTC 6 cut(s) 82, 339, 623, 1178, 2329, 2438
BstAPI GCANNNNNTGC 1 cut(s) 1765
BstC8I GCNNGC 3 cut(s) 155, 1131, 1702
BstEII GGTNACC 2 cut(s) 530, 2323
BstF5I GGATG 6 cut(s) 1060, 1149, 1197, 1802, 2138, 2901
BstFNI CGCG 1 cut(s) 155
BstHHI GCGC 3 cut(s) 155, 157, 1318
BstKTI GATC 9 cut(s) 178, 789, 1033, 1196, 1294, 2059, 2206, 2383, 2527
BstMAI GTCTC 6 cut(s) 493, 1483, 1627, 1914, 2435, 2592
BstMBI GATC 9 cut(s) 175, 786, 1030, 1193, 1291, 2056, 2203, 2380, 2524
BstMCI CGRYCG 2 cut(s) 964, 2510
BstMWI GCNNNNNNNGC 5 cut(s) 81, 255, 423, 1022, 1765
BstNI CCWGG 2 cut(s) 326, 2724
BstNSI RCATGY 3 cut(s) 686, 697, 1981
BstPI GGTNACC 2 cut(s) 530, 2323
BstSCI CCNGG 2 cut(s) 324, 2722
BstSLI GKGCMC 1 cut(s) 2723
BstUI CGCG 1 cut(s) 155
BstV1I GCAGC 1 cut(s) 2121
BstV2I GAAGAC 2 cut(s) 327, 947
BstX2I RGATCY 5 cut(s) 175, 1193, 1291, 2203, 2380
BstXI CCANNNNNNTGG 3 cut(s) 1521, 1580, 1954
BstYI RGATCY 5 cut(s) 175, 1193, 1291, 2203, 2380
Bsu15I ATCGAT 1 cut(s) 183
Bsu36I CCTNAGG 1 cut(s) 1138
BsuI GTATCC 2 cut(s) 1970, 2122
BsuRI GGCC 4 cut(s) 117, 872, 1720, 2024
BsuTUI ATCGAT 1 cut(s) 183
BtsCI GGATG 6 cut(s) 1060, 1149, 1197, 1802, 2138, 2901
BtsIMutI CAGTG 4 cut(s) 258, 568, 1336, 2809
Cac8I GCNNGC 3 cut(s) 155, 1131, 1702
CaiI CAGNNNCTG 1 cut(s) 1419
CfoI GCGC 3 cut(s) 155, 157, 1318
Cfr13I GGNCC 6 cut(s) 280, 652, 871, 890, 1430, 1718
ClaI ATCGAT 1 cut(s) 183
Csp6I GTAC 2 cut(s) 1162, 2229
CviQI GTAC 2 cut(s) 1162, 2229
DpnI GATC 9 cut(s) 177, 788, 1032, 1195, 1293, 2058, 2205, 2382, 2526
DpnII GATC 9 cut(s) 175, 786, 1030, 1193, 1291, 2056, 2203, 2380, 2524
DraI TTTAAA 1 cut(s) 2712
DraIII CACNNNGTG 1 cut(s) 2696
Eam1104I CTCTTC 6 cut(s) 82, 339, 623, 1178, 2329, 2438
EarI CTCTTC 6 cut(s) 82, 339, 623, 1178, 2329, 2438
Ecl136II GAGCTC 1 cut(s) 417
Eco130I CCWWGG 2 cut(s) 2025, 2115
Eco24I GRGCYC 1 cut(s) 419
Eco47I GGWCC 4 cut(s) 280, 652, 890, 1430
Eco53kI GAGCTC 1 cut(s) 417
Eco57I CTGAAG 4 cut(s) 339, 494, 666, 1296
Eco81I CCTNAGG 1 cut(s) 1138
Eco91I GGTNACC 2 cut(s) 530, 2323
EcoICRI GAGCTC 1 cut(s) 417
EcoO109I RGGNCCY 1 cut(s) 1430
EcoO65I GGTNACC 2 cut(s) 530, 2323
EcoRI GAATTC 6 cut(s) 877, 966, 2339, 2516, 2553, 2625
EcoRII CCWGG 2 cut(s) 324, 2722
EcoT14I CCWWGG 2 cut(s) 2025, 2115
EcoT22I ATGCAT 1 cut(s) 137
EcoT38I GRGCYC 1 cut(s) 419
ErhI CCWWGG 2 cut(s) 2025, 2115
FalI AAGNNNNNCTT 6 cut(s) 639, 671, 821, 853, 2614, 2646
FaqI GGGAC 5 cut(s) 522, 876, 1227, 1319, 2562
FauI CCCGC 3 cut(s) 1009, 1350, 1668
FbaI TGATCA 1 cut(s) 1030
Fnu4HI GCNGC 1 cut(s) 2135
FokI GGATG 6 cut(s) 1067, 1156, 1184, 1789, 2125, 2888
FriOI GRGCYC 1 cut(s) 419
Fsp4HI GCNGC 1 cut(s) 2135
FspI TGCGCA 1 cut(s) 1317
GlaI GCGC 3 cut(s) 154, 156, 1317
GluI GCNGC 1 cut(s) 2135
GsuI CTGGAG 1 cut(s) 1884
HaeIII GGCC 4 cut(s) 117, 872, 1720, 2024
HhaI GCGC 3 cut(s) 155, 157, 1318
Hin6I GCGC 3 cut(s) 153, 155, 1316
HinP1I GCGC 3 cut(s) 153, 155, 1316
HincII GTYRAC 4 cut(s) 691, 913, 1731, 2536
HindII GTYRAC 4 cut(s) 691, 913, 1731, 2536
HindIII AAGCTT 3 cut(s) 1394, 1586, 2786
HpaI GTTAAC 3 cut(s) 691, 913, 1731
HphI GGTGA 4 cut(s) 2021, 2186, 2335, 2417
Hpy166II GTNNAC 7 cut(s) 98, 652, 691, 913, 1731, 1970, 2536
Hpy188I TCNGA 6 cut(s) 474, 642, 857, 1225, 1602, 2361
Hpy8I GTNNAC 7 cut(s) 98, 652, 691, 913, 1731, 1970, 2536
HpyAV CCTTC 8 cut(s) 128, 384, 711, 755, 762, 1359, 2100, 2396
HpyCH4III ACNGT 2 cut(s) 962, 1421
HpyF10VI GCNNNNNNNGC 5 cut(s) 81, 255, 423, 1022, 1765
HspAI GCGC 3 cut(s) 153, 155, 1316
Ksp22I TGATCA 1 cut(s) 1030
KspAI GTTAAC 3 cut(s) 691, 913, 1731
Kzo9I GATC 9 cut(s) 175, 786, 1030, 1193, 1291, 2056, 2203, 2380, 2524
LguI GCTCTTC 1 cut(s) 82
LmnI GCTCC 3 cut(s) 307, 668, 1152
Lsp1109I GCAGC 1 cut(s) 2121
LweI GCATC 8 cut(s) 144, 175, 304, 719, 1134, 1506, 1777, 2910
MaeIII GTNAC 8 cut(s) 401, 530, 566, 714, 1089, 1618, 1895, 2323
MalI GATC 9 cut(s) 177, 788, 1032, 1195, 1293, 2058, 2205, 2382, 2526
MbiI CCGCTC 1 cut(s) 2619
MboI GATC 9 cut(s) 175, 786, 1030, 1193, 1291, 2056, 2203, 2380, 2524
MfeI CAATTG 1 cut(s) 2171
MflI RGATCY 5 cut(s) 175, 1193, 1291, 2203, 2380
MhlI GDGCHC 3 cut(s) 419, 2723, 2814
MlyI GAGTC 5 cut(s) 356, 1097, 1212, 1615, 2350
MmeI TCCRAC 2 cut(s) 1065, 1897
Mph1103I ATGCAT 1 cut(s) 137
MroXI GAANNNNTTC 2 cut(s) 744, 881
MslI CAYNNNNRTG 3 cut(s) 1188, 2472, 2775
MspA1I CMGCKG 1 cut(s) 888
MspR9I CCNGG 2 cut(s) 326, 2724
MunI CAATTG 1 cut(s) 2171
MvaI CCWGG 2 cut(s) 326, 2724
MvnI CGCG 1 cut(s) 155
MwoI GCNNNNNNNGC 5 cut(s) 81, 255, 423, 1022, 1765
NdeII GATC 9 cut(s) 175, 786, 1030, 1193, 1291, 2056, 2203, 2380, 2524
NheI GCTAGC 1 cut(s) 1700
NlaIV GGNNCC 4 cut(s) 670, 892, 1195, 1383
NmeAIII GCCGAG 1 cut(s) 2793
NmuCI GTSAC 4 cut(s) 1089, 1618, 1895, 2323
NsbI TGCGCA 1 cut(s) 1317
NsiI ATGCAT 1 cut(s) 137
NspI RCATGY 3 cut(s) 686, 697, 1981
PauI GCGCGC 1 cut(s) 153
PciI ACATGT 2 cut(s) 682, 1977
PciSI GCTCTTC 1 cut(s) 82
PcsI WCGNNNNNNNCGW 1 cut(s) 2820
PdmI GAANNNNTTC 2 cut(s) 744, 881
PfeI GAWTC 5 cut(s) 514, 1505, 1798, 2464, 2660
PflMI CCANNNNNTGG 2 cut(s) 527, 1555
PkrI GCNGC 1 cut(s) 2136
PleI GAGTC 5 cut(s) 355, 1096, 1212, 1615, 2350
PpsI GAGTC 5 cut(s) 355, 1096, 1212, 1615, 2350
PpuMI RGGWCCY 1 cut(s) 1430
PscI ACATGT 2 cut(s) 682, 1977
Psp124BI GAGCTC 1 cut(s) 419
Psp5II RGGWCCY 1 cut(s) 1430
Psp6I CCWGG 2 cut(s) 324, 2722
PspEI GGTNACC 2 cut(s) 530, 2323
PspGI CCWGG 2 cut(s) 324, 2722
PspN4I GGNNCC 4 cut(s) 670, 892, 1195, 1383
PspPI GGNCC 6 cut(s) 280, 652, 871, 890, 1430, 1718
PspPPI RGGWCCY 1 cut(s) 1430
PsrI GAACNNNNNNTAC 2 cut(s) 1951, 1983
PstNI CAGNNNCTG 1 cut(s) 1419
PsuI RGATCY 5 cut(s) 175, 1193, 1291, 2203, 2380
PteI GCGCGC 1 cut(s) 153
RsaI GTAC 2 cut(s) 1163, 2230
RsaNI GTAC 2 cut(s) 1162, 2229
RseI CAYNNNNRTG 3 cut(s) 1188, 2472, 2775
SacI GAGCTC 1 cut(s) 419
SapI GCTCTTC 1 cut(s) 82
SatI GCNGC 1 cut(s) 2135
Sau3AI GATC 9 cut(s) 175, 786, 1030, 1193, 1291, 2056, 2203, 2380, 2524
Sau96I GGNCC 6 cut(s) 280, 652, 871, 890, 1430, 1718
SchI GAGTC 5 cut(s) 356, 1097, 1212, 1615, 2350
ScrFI CCNGG 2 cut(s) 326, 2724
SduI GDGCHC 3 cut(s) 419, 2723, 2814
SfaNI GCATC 8 cut(s) 144, 175, 304, 719, 1134, 1506, 1777, 2910
SinI GGWCC 4 cut(s) 280, 652, 890, 1430
SmiMI CAYNNNNRTG 3 cut(s) 1188, 2472, 2775
SmlI CTYRAG 2 cut(s) 412, 1875
SmoI CTYRAG 2 cut(s) 412, 1875
SpeI ACTAGT 2 cut(s) 92, 1468
SspI AATATT 5 cut(s) 46, 1553, 1942, 2482, 2671
SstI GAGCTC 1 cut(s) 419
StyD4I CCNGG 2 cut(s) 324, 2722
StyI CCWWGG 2 cut(s) 2025, 2115
TaaI ACNGT 2 cut(s) 962, 1421
TfiI GAWTC 5 cut(s) 514, 1505, 1798, 2464, 2660
TscAI CASTG 4 cut(s) 265, 568, 1336, 2809
TseFI GTSAC 4 cut(s) 1089, 1618, 1895, 2323
TseI GCWGC 1 cut(s) 2134
Tsp45I GTSAC 4 cut(s) 1089, 1618, 1895, 2323
TspGWI ACGGA 1 cut(s) 1716
TspRI CASTG 4 cut(s) 265, 568, 1336, 2809
Van91I CCANNNNNTGG 2 cut(s) 527, 1555
VpaK11BI GGWCC 4 cut(s) 280, 652, 890, 1430
XbaI TCTAGA 3 cut(s) 725, 1237, 1624
XceI RCATGY 3 cut(s) 686, 697, 1981
XcmI CCANNNNNNNNNTGG 1 cut(s) 828
XmnI GAANNNNTTC 2 cut(s) 744, 881
Zsp2I ATGCAT 1 cut(s) 137
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.