RLG00000020007

LRR receptor-like serine threonine-protein kinase

Basic Information

Type: gene
Biological Identity
rosa_laevigata
Chr4
Physical Location & Seq
Reverse (-)
59920247 .. 59925343
5097 bp
Loading structure...
UTR
Exon/CDS
Intron
RLM00000020007

Sequence Viewer

Length: 2481 bp
ATGGGTGTTCCAGAGGGGTCTGAAGTGCAAGCTGGAGGAAAGAAGGGTGATGGCCCTAAGAAGAAGGCGGTGACTCGCTCCGTCAAAGCCAGTCTGCAATTTCTGGTCAATAGGATTGGCTGCTACTTGAAGAAGGGAAGCTCGGGGCAACAAGAAGAACAGGATTATCCCAAGGCATCTGTTATTGGCTGTGAGGAATGGCGAAGAGCTTGGCATCTTGCCGGGGTTACTATTGGTCATGGAGTTGCGCTTCAATCAGATCCTAATGTGGGTTGCATGGATATCGAGAGGAAAGCCCTTCTGAAGCTCCGAGAGGGACTCGCTGATCCTTCAGACCGGCTTTCATCTTGGGTTGGAGTAGATTGCTGCAAATGGATAGGTATAAGCTGCGACAAGACAACTGGACGCGTGGACAGCCTTAATCTTCGCAACCCGTATGTAGATGTTTTGGAGAGTGATGATGGAACACTCCATGCTTTAGGAGGTGAGATCAATCCTTCATTGCTTGTTTTGAAAGATTTGGTTTACTTGGATTTGAGCATGAATAACTTTGGAGGCCTAGAACTTCCAAGTTTCATTGGATCACTAGAAAAAATAACATATCTCAATCTATCTGGTGCATCATTTGGTGGAGTAATTCCCGCCAATCTTGGAAACCTTTCAAAATTGCTTCATCTTGATCTCAGTAATAATGCTGTTGAGATCAACCTTGACCTAAGTAGGAACAATCTCAATGGAGAACTTCCAGAAACACTCGGGAGTTTGACTCATCTGAAGAACCTTGATTTGTCAGAGAATTCAGACATCGGAGGTCAGTTGCCCAGAAACTTGGGAATGCTATGCGATTTGCAGTCTCTTGAACTTTCAATCAACAAAGTTACAGGTGAGATAACTGAGTTCATTGATAGATTGTCTATATGCACAAACAGCAGCTTAGAGAGGTTGGATTTAGGTTATAACAGTCTGACAGGAAATTTGCCTAATTCATTGGGACTTCTTAAGAAGTTAAGATACCTCACGTTGTGGTCCAACTCATTTCAGGGTTCTATCCCAGAATCTATTGGAAACTTGACATCTTTGGAGGAATTTTACGTTGCAAGAAATAAAATGGGTGGAGTCATCCCAGAAAGTTTTGGGCAGCTCTCATCACTCGTTGCAGTAGATCTGTCTGAAAACACATGGGAAGGTGTTGTAACAGAAGCTCATTTTCTGAAACTTCGAAGCTTAAAAGACGTGTCAATCCTGAAAGCCTCCCCAAACATTTCCCTAGTTTTCAACATTAGTTCTAATTGGATACCTCCTTTCAAATTGAGATTCTTGAACCTTAGATCATGTCAACTGGGTCCCAAATTTCCTGCATGGCTTAGAAATCAGACTGAGCTTGTCACGGTGGTCCTCAATAATGCAAAGATTGCAGATACCATACCAGATTGGTTTCGGCAGTTGAATTTGTTATTGAATGAACTAGATGTTGCTTACAATCAACTAAGCGGCAAGGTGCCGAACTCGCTAAGGTTCAGCTATCCTGCTACTGTTGATTTGAGTTCAAACCTGTTTGAGGGCCTCCTCCCACTTTGGTCAAGAAATATTACATCGCTTGACCTCAGGGATAATTTTTTCTCAGGGCCAATTCCTTCGAACATTGGTGATGTGATGCCCTCCTTGTCAGATTTAGACATCTCTAGGAATGGTTTGAGTGGAAGCATTCCCCTGTCTTTAGGTAATCTAAGCCTTCTGACAACCATGGGGAAGTTGAAGGTAGTGGCAAAAGGAAGAGTGCAAGACTTCGATCCCACTCTCTATCTTGTTAATAGCCTAGATCTCTCAAACAATAACTTATCAGGTGAGATGCCGAGGGAGCTCACAAGCCTGATAAAGTTGTGGACCTTGAATTTATCCATGAATCATCTGACAGGAGCAATGCCATCAAGGATTGGGAGCATGGAGTCGCTAGAAACTCTTGATTTGTCACTAAACCAGCTTTCAGGTTCCATTCCACAGAGTATGGTTTCATTGACATTCTTGAATCATCTAAACCTCTCATACAACAACTTGTCTGGGACAATCCCAACAGGCAACCAGTTTAACAGCCTGGTTGATCCATCAATATATGAAGGCAATGCCGCTCTTTGTGGTTATCCGTTGCCTGATTGCCAAGACAATGGCGGAACTCCTCAGGGTCCAAGTGGAGGTGGAGAAGACACTGGCTTTAAAATGTGGGGTTTCATCATCAGCATGCTGATCGGTTTCGTTATGGGGTTCTGGGGAGTTTGTGGGAGTTTGGTCATCAGCAAGTCTTGGAGGAAGACATATTTCCACTTCACTGACAAAATGATTGTTGCTTGTATACGGAAATATCAGGGGGCCGGAAGTTCACTTCACATTGTGTCATTCCACTCCGAGTCCCAAGTCCAAACTGAACTCACCGTACGTTGGTTTGTTGGAAAGCAAGTTATTGTTGCAACTGCTGGCATTTTATAA

Protein Analysis

827

Amino Acids

90.04

Weight (kDa)

5.63

Isoelectric Point (pI)

35.33

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
LRRNT_2 PF08263 96 - 131 5.6e-11 Leucine rich repeat N-terminal domain
LRR_14 PF23598 171 - 294 2.6e-07 Leucine-rich repeat region
LRR_14 PF23598 311 - 459 8.5e-13 Leucine-rich repeat region
LRR_8 PF13855 335 - 392 4.7e-07 Leucine rich repeat
LRR_8 PF13855 627 - 685 1.8e-06 Leucine rich repeat
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready

Orthologous Genes (Group: OG0000048)

Species Orthologous Gene IDs
arabidopsis_thaliana AT2G34930
fragaria_vesca FvH4_3g12670 FvH4_3g12672 FvH4_3g12740 FvH4_3g12742 FvH4_3g12770 FvH4_3g12770 FvH4_3g12860 FvH4_3g12890 FvH4_3g13431 FvH4_3g13433 FvH4_3g13435 FvH4_3g13470 FvH4_3g13470 FvH4_3g13480 FvH4_3g13562 FvH4_3g13580 FvH4_3g13600 FvH4_3g13600 FvH4_3g13600 FvH4_3g13600 FvH4_3g13600 FvH4_3g13600 FvH4_3g13610 FvH4_3g13620 FvH4_3g13620 FvH4_3g23240 FvH4_3g32910 FvH4_3g35070 FvH4_3g45520 FvH4_5g08430 FvH4_5g08450 FvH4_6g53230 FvH4_6g53300
malus_domestica MD05G1217600.v1.1 MD05G1217700.v1.1 MD05G1224700.v1.1 MD05G1225100.v1.1 MD05G1225300.v1.1 MD05G1225400.v1.1 MD05G1235900.v1.1 MD05G1236100.v1.1 MD05G1236300.v1.1 MD05G1237200.v1.1 MD05G1241600.v1.1 MD05G1245700.v1.1 MD05G1245800.v1.1 MD05G1245900.v1.1 MD05G1246000.v1.1 MD05G1246100.v1.1 MD05G1246300.v1.1 MD05G1246400.v1.1 MD05G1246500.v1.1 MD05G1248100.v1.1 MD05G1248200.v1.1 MD05G1264300.v1.1 MD05G1275900.v1.1 MD07G1051400.v1.1 MD09G1012600.v1.1 MD09G1012700.v1.1 MD09G1012800.v1.1 MD10G1221400.v1.1 MD10G1221500.v1.1 MD10G1221600.v1.1 MD10G1221900.v1.1 MD10G1222200.v1.1 MD10G1222400.v1.1 MD10G1222500.v1.1 MD10G1222900.v1.1 MD10G1223000.v1.1 MD10G1223100.v1.1 MD10G1223500.v1.1 MD10G1228000.v1.1 MD12G1019600.v1.1 MD12G1020000.v1.1 MD12G1020100.v1.1 MD17G1013200.v1.1 MD17G1013300.v1.1 MD17G1013400.v1.1
prunus_persica Prupe.1G060500_v2.0.a1 Prupe.1G100100_v2.0.a1 Prupe.3G124000_v2.0.a1 Prupe.3G304400_v2.0.a1 Prupe.4G116800_v2.0.a1 Prupe.4G116900_v2.0.a1 Prupe.4G117000_v2.0.a1 Prupe.4G121800_v2.0.a1 Prupe.4G121900_v2.0.a1 Prupe.4G122000_v2.0.a1 Prupe.4G122100_v2.0.a1 Prupe.4G122200_v2.0.a1 Prupe.4G122300_v2.0.a1 Prupe.4G122500_v2.0.a1 Prupe.4G122600_v2.0.a1 Prupe.4G122800_v2.0.a1 Prupe.4G122900_v2.0.a1 Prupe.4G123000_v2.0.a1 Prupe.4G123100_v2.0.a1 Prupe.4G123200_v2.0.a1 Prupe.4G131500_v2.0.a1 Prupe.4G131600_v2.0.a1 Prupe.7G032500_v2.0.a1 Prupe.7G032900_v2.0.a1 Prupe.7G033000_v2.0.a1 Prupe.7G033100_v2.0.a1 Prupe.7G033300_v2.0.a1 Prupe.7G033600_v2.0.a1 Prupe.7G034600_v2.0.a1 Prupe.7G040200_v2.0.a1 Prupe.7G059200_v2.0.a1
pyrus_communis pycom05g20580 pycom05g20590 pycom05g20760 pycom05g20800 pycom05g21280 pycom05g21290 pycom05g21820 pycom05g21830 pycom05g22180 pycom05g22190 pycom05g22210 pycom05g22450 pycom05g22460 pycom05g22470 pycom05g22480 pycom05g22490 pycom05g23770 pycom05g23780 pycom05g24050 pycom05g24060 pycom07g03910 pycom10g18700 pycom10g18720 pycom10g18730 pycom10g18740 pycom10g19150 pycom111g01060 pycom12g01660 pycom12g01690 pycom12g01720 pycom12g01740 pycom12g01750 pycom12g01770 pycom12g01810 pycom12g01820 pycom12g01830 pycom12g01840 pycom12g01870 pycom12g01900 pycom17g01060 pycom17g01070
rosa_chinensis RchiOBHm_Chr1g0315041 RchiOBHm_Chr1g0315051 RchiOBHm_Chr1g0315071 RchiOBHm_Chr1g0315161 RchiOBHm_Chr1g0315211 RchiOBHm_Chr1g0315251 RchiOBHm_Chr1g0315321 RchiOBHm_Chr1g0315391 RchiOBHm_Chr1g0315451 RchiOBHm_Chr1g0315481 RchiOBHm_Chr1g0315551 RchiOBHm_Chr1g0315601 RchiOBHm_Chr1g0315621 RchiOBHm_Chr1g0359221 RchiOBHm_Chr2g0142981 RchiOBHm_Chr2g0143001 RchiOBHm_Chr2g0143061 RchiOBHm_Chr2g0143091 RchiOBHm_Chr2g0175321 RchiOBHm_Chr2g0175341 RchiOBHm_Chr2g0175361 RchiOBHm_Chr2g0175371 RchiOBHm_Chr3g0470491 RchiOBHm_Chr3g0480881 RchiOBHm_Chr3g0485511 RchiOBHm_Chr5g0020741 RchiOBHm_Chr5g0020901 RchiOBHm_Chr5g0020931 RchiOBHm_Chr5g0020941 RchiOBHm_Chr5g0020961 RchiOBHm_Chr5g0020971 RchiOBHm_Chr5g0021451 RchiOBHm_Chr5g0021531 RchiOBHm_Chr5g0021831 RchiOBHm_Chr5g0021841 RchiOBHm_Chr5g0021931 RchiOBHm_Chr5g0021941 RchiOBHm_Chr5g0021981 RchiOBHm_Chr5g0021991 RchiOBHm_Chr5g0022011 RchiOBHm_Chr5g0022181 RchiOBHm_Chr5g0022191 RchiOBHm_Chr5g0022211 RchiOBHm_Chr5g0022221 RchiOBHm_Chr5g0022231 RchiOBHm_Chr5g0022291 RchiOBHm_Chr5g0022301 RchiOBHm_Chr5g0022331 RchiOBHm_Chr5g0022361 RchiOBHm_Chr5g0022371 RchiOBHm_Chr5g0022381 RchiOBHm_Chr5g0022401 RchiOBHm_Chr5g0022431 RchiOBHm_Chr5g0022451 RchiOBHm_Chr5g0022541 RchiOBHm_Chr5g0022591 RchiOBHm_Chr5g0022601 RchiOBHm_Chr5g0022701 RchiOBHm_Chr5g0022741 RchiOBHm_Chr5g0022791 RchiOBHm_Chr5g0022811 RchiOBHm_Chr5g0022851 RchiOBHm_Chr5g0029441 RchiOBHm_Chr5g0041631 RchiOBHm_Chr5g0069391 RchiOBHm_Chr6g0273811 RchiOBHm_Chr6g0273831 RchiOBHm_Chr6g0275331 RchiOBHm_Chr7g0219061
rosa_laevigata RLG00000002463 RLG00000020007 RLG00000020008 RLG00000022320 RLG00000022321 RLG00000023446 RLG00000030742 RLG00000030743 RLG00000030747 RLG00000032557 RLG00000032564 RLG00000032571 RLG00000032573 RLG00000032574 RLG00000032612 RLG00000032633 RLG00000032636 RLG00000032638 RLG00000032650 RLG00000032651 RLG00000032652 RLG00000032653 RLG00000032655 RLG00000032673 RLG00000032678 RLG00000032769 RLG00000032857 RLG00000033168 RLG00000033465 RLG00000034086 RLG00000034222 RLG00000035290
rosa_multiflora Rmu_co8143358.1_g000001 Rmu_co8518791.1_g000001 Rmu_sc0000178.1_g000008 Rmu_sc0000178.1_g000014 Rmu_sc0000401.1_g000005 Rmu_sc0000401.1_g000013 Rmu_sc0000401.1_g000017 Rmu_sc0000401.1_g000018 Rmu_sc0000401.1_g000024 Rmu_sc0000401.1_g000025 Rmu_sc0000576.1_g000020 Rmu_sc0001585.1_g000003 Rmu_sc0001585.1_g000005 Rmu_sc0001585.1_g000008 Rmu_sc0001784.1_g000006 Rmu_sc0001784.1_g000011 Rmu_sc0001784.1_g000022 Rmu_sc0001784.1_g000028 Rmu_sc0002052.1_g000004 Rmu_sc0002052.1_g000011 Rmu_sc0002277.1_g000003 Rmu_sc0002277.1_g000006 Rmu_sc0002277.1_g000024 Rmu_sc0002658.1_g000012 Rmu_sc0003512.1_g000004 Rmu_sc0003512.1_g000007 Rmu_sc0004180.1_g000016 Rmu_sc0004180.1_g000029 Rmu_sc0004180.1_g000034 Rmu_sc0005639.1_g000008 Rmu_sc0005639.1_g000023 Rmu_sc0006070.1_g000016 Rmu_sc0006070.1_g000017 Rmu_sc0006966.1_g000021 Rmu_sc0006966.1_g000023 Rmu_sc0007239.1_g000003 Rmu_sc0008460.1_g000010 Rmu_sc0009984.1_g000008 Rmu_sc0010181.1_g000005 Rmu_sc0010181.1_g000010 Rmu_sc0010503.1_g000006 Rmu_sc0011646.1_g000003 Rmu_sc0012984.1_g000011 Rmu_sc0016972.1_g000005 Rmu_sc0016972.1_g000008 Rmu_sc0023070.1_g000003 Rmu_sc0025660.1_g000001 Rmu_ssc0000322.1_g000019
rosa_roxburghii Rroxscaffold_1G00038860 Rroxscaffold_1G00053490 Rroxscaffold_1G00053500 Rroxscaffold_1G00054230 Rroxscaffold_1G00056460 Rroxscaffold_1G00056470 Rroxscaffold_1G00056480 Rroxscaffold_1G00056500 Rroxscaffold_1G00056510 Rroxscaffold_1G00056620 Rroxscaffold_1G00056690 Rroxscaffold_1G00056710 Rroxscaffold_1G00056720 Rroxscaffold_1G00056730 Rroxscaffold_1G00056740 Rroxscaffold_1G00056750 Rroxscaffold_1G00056760 Rroxscaffold_1G00056870 Rroxscaffold_1G00056900 Rroxscaffold_1G00057120 Rroxscaffold_1G00057560 Rroxscaffold_2G00077430 Rroxscaffold_2G00102160 Rroxscaffold_3G00231420 Rroxscaffold_3G00231430 Rroxscaffold_4G00297230 Rroxscaffold_4G00331570 Rroxscaffold_6G00396700 Rroxscaffold_6G00400940 Rroxscaffold_7G00192740
rosa_rugosa Rorug01G0004400 Rorug01G0004500 Rorug02G0377600 Rorug02G0378000 Rorug02G0582800 Rorug02G0583400 Rorug03G0187000 Rorug03G0218800 Rorug04G0081200 Rorug05G0062700 Rorug05G0062700 Rorug05G0063100 Rorug05G0063200 Rorug05G0063200 Rorug05G0063200 Rorug05G0067000 Rorug05G0069700 Rorug05G0069900 Rorug05G0070000 Rorug05G0070100 Rorug05G0070300 Rorug05G0070400 Rorug05G0070600 Rorug05G0070600 Rorug05G0072300 Rorug05G0072400 Rorug05G0072500 Rorug05G0072500 Rorug05G0072600.1 Rorug05G0072700 Rorug05G0072800 Rorug05G0072800 Rorug05G0072900 Rorug05G0073000 Rorug05G0073000 Rorug05G0073400 Rorug05G0073400 Rorug05G0073400 Rorug05G0074800 Rorug05G0075000 Rorug05G0114300 Rorug05G0194200 Rorug06G0097800
rosa_samantha Rh2AG401400 Rh2CG387600 Rh2CG417000 Rh2CG637400 Rh5CG169600 Rh5CG172100 Rh5CG175200 Rh5CG317100 Rh6DG187900
rosa_wichuraiana Rw1G000750 Rw1G000790 Rw1G000820 Rw1G000860 Rw1G000880 Rw1G000910 Rw2G035180 Rw2G035200 Rw2G035240 Rw2G054370 Rw2G054380 Rw5G013570 Rw5G013580 Rw5G013590 Rw5G013910 Rw5G013980 Rw5G014110 Rw5G014120 Rw5G014280 Rw5G014310 Rw5G014400 Rw5G014420 Rw5G014440 Rw5G014460 Rw5G014480 Rw5G014500 Rw5G014520 Rw5G014530 Rw5G042390

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 2 cut(s) 957, 2479
AccB1I GGYRCC 1 cut(s) 1498
AccBSI CCGCTC 1 cut(s) 2126
AccI GTMKAC 1 cut(s) 2347
AccII CGCG 1 cut(s) 408
AciI CCGC 5 cut(s) 68, 642, 1491, 2124, 2166
AclWI GGATC 5 cut(s) 254, 320, 589, 1784, 2093
AcsI RAATTY 6 cut(s) 796, 973, 1085, 1349, 1447, 1891
AcuI CTGAAG 4 cut(s) 42, 315, 323, 794
AdeI CACNNNGTG 2 cut(s) 1023, 2386
AfaI GTAC 1 cut(s) 2430
AfiI CCNNNNNNNGG 4 cut(s) 269, 1558, 2189, 2433
AflII CTTAAG 1 cut(s) 998
AflIII ACRYGT 2 cut(s) 406, 1233
AjiI CACGTC 1 cut(s) 1234
AjnI CCWGG 1 cut(s) 2091
Alw21I GWGCWC 1 cut(s) 1863
Alw26I GTCTC 1 cut(s) 858
AlwI GGATC 5 cut(s) 254, 320, 589, 1784, 2093
Ama87I CYCGRG 2 cut(s) 142, 755
AoxI GGCC 5 cut(s) 52, 556, 1561, 1625, 2364
ApeKI GCWGC 5 cut(s) 120, 366, 387, 930, 1138
ApoI RAATTY 6 cut(s) 796, 973, 1085, 1349, 1447, 1891
ArsI GACNNNNNNTTYG 2 cut(s) 958, 990
Asp700I GAANNNNTTC 1 cut(s) 658
AspLEI GCGC 1 cut(s) 250
AspS9I GGNCC 9 cut(s) 53, 1026, 1343, 1393, 1561, 1625, 1884, 2180, 2364
AsuC2I CCSGG 1 cut(s) 223
AsuHPI GGTGA 7 cut(s) 59, 82, 497, 896, 1658, 1856, 2416
AsuII TTCGAA 2 cut(s) 1219, 1637
AvaI CYCGRG 2 cut(s) 142, 755
AvaII GGWCC 5 cut(s) 1026, 1343, 1393, 1884, 2180
AxyI CCTNAGG 2 cut(s) 1604, 2175
BanI GGYRCC 1 cut(s) 1498
BanII GRGCYC 1 cut(s) 1863
BarI GAAGNNNNNNTAC 2 cut(s) 995, 1027
BbsI GAAGAC 2 cut(s) 2205, 2312
Bbv12I GWGCWC 1 cut(s) 1863
BbvI GCAGC 5 cut(s) 107, 353, 374, 942, 1150
BccI CCATC 4 cut(s) 44, 455, 1933, 2110
BcgI CGANNNNNNTGC 4 cut(s) 265, 299, 2224, 2258
BciT130I CCWGG 1 cut(s) 2093
BciVI GTATCC 1 cut(s) 1287
BcnI CCSGG 1 cut(s) 223
BcoDI GTCTC 1 cut(s) 858
BfaI CTAG 7 cut(s) 560, 587, 1268, 1466, 1683, 1817, 1952
BfrI CTTAAG 1 cut(s) 998
BfuI GTATCC 1 cut(s) 1287
BglII AGATCT 2 cut(s) 1162, 1819
BisI GCNGC 7 cut(s) 121, 367, 388, 931, 1139, 1492, 2124
BlsI GCNGC 7 cut(s) 122, 368, 389, 932, 1140, 1493, 2125
Bme1390I CCNGG 2 cut(s) 223, 2093
Bme18I GGWCC 5 cut(s) 1026, 1343, 1393, 1884, 2180
BmeT110I CYCGRG 2 cut(s) 142, 755
BmgBI CACGTC 1 cut(s) 1234
BmgT120I GGNCC 9 cut(s) 53, 1026, 1343, 1393, 1561, 1625, 1884, 2180, 2364
BmiI GGNNCC 6 cut(s) 1344, 1345, 1500, 1990, 2181, 2365
BmrFI CCNGG 2 cut(s) 223, 2093
BmrI ACTGGG 1 cut(s) 1349
BmsI GCATC 5 cut(s) 185, 223, 629, 1644, 1839
BmuI ACTGGG 1 cut(s) 1349
BpiI GAAGAC 2 cut(s) 2205, 2312
BplI GAGNNNNNCTC 4 cut(s) 303, 335, 751, 783
BpmI CTGGAG 1 cut(s) 54
Bpu10I CCTNAGC 1 cut(s) 1511
Bpu14I TTCGAA 2 cut(s) 1219, 1637
BpuMI CCSGG 1 cut(s) 223
BsaJI CCNNGG 4 cut(s) 171, 222, 1743, 1853
Bsc4I CCNNNNNNNGG 4 cut(s) 269, 1558, 2189, 2433
Bse118I RCCGGY 1 cut(s) 336
Bse1I ACTGG 5 cut(s) 90, 406, 1344, 2080, 2209
Bse21I CCTNAGG 2 cut(s) 1604, 2175
Bse3DI GCAATG 3 cut(s) 500, 1926, 2125
BseBI CCWGG 1 cut(s) 2093
BseDI CCNNGG 4 cut(s) 171, 222, 1743, 1853
BseGI GGATG 1 cut(s) 1119
BseLI CCNNNNNNNGG 4 cut(s) 269, 1558, 2189, 2433
BseMI GCAATG 3 cut(s) 500, 1926, 2125
BseMII CTCAG 6 cut(s) 697, 885, 1368, 1618, 1635, 2189
BseNI ACTGG 5 cut(s) 90, 406, 1344, 2080, 2209
BseRI GAGGAG 2 cut(s) 1556, 2163
BseXI GCAGC 5 cut(s) 107, 353, 374, 942, 1150
Bsh1236I CGCG 1 cut(s) 408
BshFI GGCC 5 cut(s) 54, 558, 1563, 1627, 2366
BshNI GGYRCC 1 cut(s) 1498
BsiHKAI GWGCWC 1 cut(s) 1863
BsiHKCI CYCGRG 2 cut(s) 142, 755
BsiSI CCGG 3 cut(s) 222, 337, 2367
BsiWI CGTACG 1 cut(s) 2428
BslFI GGGAC 5 cut(s) 330, 1005, 1329, 2074, 2389
BslI CCNNNNNNNGG 4 cut(s) 269, 1558, 2189, 2433
BsmAI GTCTC 1 cut(s) 858
BsmFI GGGAC 5 cut(s) 330, 1005, 1329, 2074, 2389
BsmI GAATGC 2 cut(s) 840, 1704
BsnI GGCC 5 cut(s) 54, 558, 1563, 1627, 2366
BsoBI CYCGRG 2 cut(s) 142, 755
Bsp119I TTCGAA 2 cut(s) 1219, 1637
Bsp1286I GDGCHC 1 cut(s) 1863
Bsp19I CCATGG 1 cut(s) 1743
BspACI CCGC 5 cut(s) 68, 642, 1491, 2124, 2166
BspANI GGCC 5 cut(s) 54, 558, 1563, 1627, 2366
BspCNI CTCAG 6 cut(s) 696, 886, 1369, 1617, 1634, 2188
BspFNI CGCG 1 cut(s) 408
BspLI GGNNCC 6 cut(s) 1344, 1345, 1500, 1990, 2181, 2365
BspPI GGATC 5 cut(s) 254, 320, 589, 1784, 2093
BspQI GCTCTTC 1 cut(s) 199
BspT104I TTCGAA 2 cut(s) 1219, 1637
BspT107I GGYRCC 1 cut(s) 1498
BspTI CTTAAG 1 cut(s) 998
BsrBI CCGCTC 1 cut(s) 2126
BsrDI GCAATG 3 cut(s) 500, 1926, 2125
BsrFI RCCGGY 1 cut(s) 336
BsrI ACTGG 5 cut(s) 90, 406, 1344, 2080, 2209
BssAI RCCGGY 1 cut(s) 336
BssECI CCNNGG 4 cut(s) 171, 222, 1743, 1853
BssNAI GTATAC 1 cut(s) 2348
BssT1I CCWWGG 2 cut(s) 171, 1743
Bst1107I GTATAC 1 cut(s) 2348
Bst2UI CCWGG 1 cut(s) 2093
Bst4CI ACNGT 4 cut(s) 962, 1390, 1534, 2428
Bst6I CTCTTC 2 cut(s) 199, 1768
BstAFI CTTAAG 1 cut(s) 998
BstAPI GCANNNNNTGC 1 cut(s) 1412
BstBI TTCGAA 2 cut(s) 1219, 1637
BstC8I GCNNGC 3 cut(s) 30, 2237, 2470
BstDSI CCRYGG 1 cut(s) 1743
BstENI CCTNNNNNAGG 1 cut(s) 1556
BstF5I GGATG 1 cut(s) 1119
BstFNI CGCG 1 cut(s) 408
BstHHI GCGC 1 cut(s) 250
BstMAI GTCTC 1 cut(s) 858
BstMWI GCNNNNNNNGC 5 cut(s) 414, 927, 1412, 1507, 1858
BstNI CCWGG 1 cut(s) 2093
BstNSI RCATGY 1 cut(s) 2239
BstSCI CCNGG 2 cut(s) 221, 2091
BstUI CGCG 1 cut(s) 408
BstV1I GCAGC 5 cut(s) 107, 353, 374, 942, 1150
BstV2I GAAGAC 2 cut(s) 2205, 2312
BstX2I RGATCY 3 cut(s) 259, 1162, 1819
BstXI CCANNNNNNTGG 2 cut(s) 829, 2162
BstYI RGATCY 3 cut(s) 259, 1162, 1819
BstZ17I GTATAC 1 cut(s) 2348
Bsu36I CCTNAGG 2 cut(s) 1604, 2175
BsuI GTATCC 1 cut(s) 1287
BsuRI GGCC 5 cut(s) 54, 558, 1563, 1627, 2366
BtgI CCRYGG 1 cut(s) 1743
BtgZI GCGATG 1 cut(s) 1578
BtrI CACGTC 1 cut(s) 1234
BtsCI GGATG 1 cut(s) 1119
BtsIMutI CAGTG 2 cut(s) 2202, 2322
Cac8I GCNNGC 3 cut(s) 30, 2237, 2470
CfoI GCGC 1 cut(s) 250
Cfr10I RCCGGY 1 cut(s) 336
Cfr13I GGNCC 9 cut(s) 53, 1026, 1343, 1393, 1561, 1625, 1884, 2180, 2364
CseI GACGC 1 cut(s) 414
Csp6I GTAC 1 cut(s) 2429
CviQI GTAC 1 cut(s) 2429
DraI TTTAAA 1 cut(s) 2212
DraIII CACNNNGTG 2 cut(s) 1023, 2386
Eam1104I CTCTTC 2 cut(s) 199, 1768
EarI CTCTTC 2 cut(s) 199, 1768
EciI GGCGGA 1 cut(s) 2181
Ecl136II GAGCTC 1 cut(s) 1861
Eco130I CCWWGG 2 cut(s) 171, 1743
Eco147I AGGCCT 1 cut(s) 558
Eco24I GRGCYC 1 cut(s) 1863
Eco32I GATATC 1 cut(s) 283
Eco47I GGWCC 5 cut(s) 1026, 1343, 1393, 1884, 2180
Eco53kI GAGCTC 1 cut(s) 1861
Eco57I CTGAAG 4 cut(s) 42, 315, 323, 794
Eco81I CCTNAGG 2 cut(s) 1604, 2175
Eco88I CYCGRG 2 cut(s) 142, 755
EcoICRI GAGCTC 1 cut(s) 1861
EcoNI CCTNNNNNAGG 1 cut(s) 1556
EcoO109I RGGNCCY 2 cut(s) 1343, 1561
EcoRI GAATTC 1 cut(s) 796
EcoRII CCWGG 1 cut(s) 2091
EcoRV GATATC 1 cut(s) 283
EcoT14I CCWWGG 2 cut(s) 171, 1743
EcoT38I GRGCYC 1 cut(s) 1863
ErhI CCWWGG 2 cut(s) 171, 1743
FaqI GGGAC 5 cut(s) 330, 1005, 1329, 2074, 2389
FauI CCCGC 1 cut(s) 649
FblI GTMKAC 1 cut(s) 2347
Fnu4HI GCNGC 7 cut(s) 121, 367, 388, 931, 1139, 1492, 2124
FokI GGATG 1 cut(s) 1106
FriOI GRGCYC 1 cut(s) 1863
Fsp4HI GCNGC 7 cut(s) 121, 367, 388, 931, 1139, 1492, 2124
FspBI CTAG 7 cut(s) 560, 587, 1268, 1466, 1683, 1817, 1952
GlaI GCGC 1 cut(s) 249
GluI GCNGC 7 cut(s) 121, 367, 388, 931, 1139, 1492, 2124
GsuI CTGGAG 1 cut(s) 54
HaeIII GGCC 5 cut(s) 54, 558, 1563, 1627, 2366
HapII CCGG 3 cut(s) 222, 337, 2367
HgaI GACGC 1 cut(s) 414
HhaI GCGC 1 cut(s) 250
Hin6I GCGC 1 cut(s) 248
HinP1I GCGC 1 cut(s) 248
HincII GTYRAC 1 cut(s) 1337
HindII GTYRAC 1 cut(s) 1337
HindIII AAGCTT 1 cut(s) 1222
HpaII CCGG 3 cut(s) 222, 337, 2367
HphI GGTGA 7 cut(s) 59, 82, 497, 896, 1658, 1856, 2416
Hpy166II GTNNAC 6 cut(s) 412, 526, 1337, 1884, 2348, 2375
Hpy8I GTNNAC 6 cut(s) 412, 526, 1337, 1884, 2348, 2375
HpyCH4III ACNGT 4 cut(s) 962, 1390, 1534, 2428
HpyCH4IV ACGT 4 cut(s) 1019, 1092, 1233, 2431
HpyF10VI GCNNNNNNNGC 5 cut(s) 414, 927, 1412, 1507, 1858
HpySE526I ACGT 4 cut(s) 1019, 1092, 1233, 2431
HspAI GCGC 1 cut(s) 248
KflI GGGWCCC 1 cut(s) 1343
LguI GCTCTTC 1 cut(s) 199
LmnI GCTCC 5 cut(s) 83, 312, 1858, 1916, 1938
Lsp1109I GCAGC 5 cut(s) 107, 353, 374, 942, 1150
LweI GCATC 5 cut(s) 185, 223, 629, 1644, 1839
MaeI CTAG 7 cut(s) 560, 587, 1268, 1466, 1683, 1817, 1952
MaeII ACGT 4 cut(s) 1019, 1092, 1233, 2431
MaeIII GTNAC 6 cut(s) 70, 226, 877, 1192, 1384, 1968
MbiI CCGCTC 1 cut(s) 2126
MboII GAAGA 9 cut(s) 73, 142, 167, 216, 416, 787, 1785, 2210, 2317
MflI RGATCY 3 cut(s) 259, 1162, 1819
MhlI GDGCHC 1 cut(s) 1863
MluI ACGCGT 1 cut(s) 406
MlyI GAGTC 6 cut(s) 67, 312, 760, 1125, 1955, 2411
MmeI TCCRAC 4 cut(s) 334, 924, 1053, 2422
MroXI GAANNNNTTC 1 cut(s) 658
MseI TTAA 7 cut(s) 420, 999, 1007, 1226, 1809, 2085, 2211
MslI CAYNNNNRTG 1 cut(s) 2234
MspCI CTTAAG 1 cut(s) 998
MspI CCGG 3 cut(s) 222, 337, 2367
MspR9I CCNGG 2 cut(s) 223, 2093
Mva1269I GAATGC 2 cut(s) 840, 1704
MvaI CCWGG 1 cut(s) 2093
MvnI CGCG 1 cut(s) 408
MwoI GCNNNNNNNGC 5 cut(s) 414, 927, 1412, 1507, 1858
NciI CCSGG 1 cut(s) 223
NcoI CCATGG 1 cut(s) 1743
NlaIV GGNNCC 6 cut(s) 1344, 1345, 1500, 1990, 2181, 2365
NmeAIII GCCGAG 1 cut(s) 1878
NmuCI GTSAC 3 cut(s) 70, 1384, 1968
NspI RCATGY 1 cut(s) 2239
NspV TTCGAA 2 cut(s) 1219, 1637
PaeI GCATGC 1 cut(s) 2239
PceI AGGCCT 1 cut(s) 558
PciSI GCTCTTC 1 cut(s) 199
PctI GAATGC 2 cut(s) 840, 1704
PdmI GAANNNNTTC 1 cut(s) 658
PfeI GAWTC 4 cut(s) 1055, 1314, 1903, 2026
Pfl23II CGTACG 1 cut(s) 2428
PkrI GCNGC 7 cut(s) 122, 368, 389, 932, 1140, 1493, 2125
PleI GAGTC 6 cut(s) 67, 312, 760, 1124, 1954, 2410
PpsI GAGTC 6 cut(s) 67, 312, 760, 1124, 1954, 2410
PpuMI RGGWCCY 1 cut(s) 1343
PsiI TTATAA 2 cut(s) 957, 2479
Psp124BI GAGCTC 1 cut(s) 1863
Psp5II RGGWCCY 1 cut(s) 1343
Psp6I CCWGG 1 cut(s) 2091
PspGI CCWGG 1 cut(s) 2091
PspLI CGTACG 1 cut(s) 2428
PspN4I GGNNCC 6 cut(s) 1344, 1345, 1500, 1990, 2181, 2365
PspPI GGNCC 9 cut(s) 53, 1026, 1343, 1393, 1561, 1625, 1884, 2180, 2364
PspPPI RGGWCCY 1 cut(s) 1343
PsrI GAACNNNNNNTAC 2 cut(s) 2412, 2444
PsuI RGATCY 3 cut(s) 259, 1162, 1819
RsaI GTAC 1 cut(s) 2430
RsaNI GTAC 1 cut(s) 2429
RseI CAYNNNNRTG 1 cut(s) 2234
SacI GAGCTC 1 cut(s) 1863
SapI GCTCTTC 1 cut(s) 199
SaqAI TTAA 7 cut(s) 420, 999, 1007, 1226, 1809, 2085, 2211
SatI GCNGC 7 cut(s) 121, 367, 388, 931, 1139, 1492, 2124
Sau96I GGNCC 9 cut(s) 53, 1026, 1343, 1393, 1561, 1625, 1884, 2180, 2364
SchI GAGTC 6 cut(s) 67, 312, 760, 1125, 1955, 2411
ScrFI CCNGG 2 cut(s) 223, 2093
SduI GDGCHC 1 cut(s) 1863
SfaNI GCATC 5 cut(s) 185, 223, 629, 1644, 1839
SfuI TTCGAA 2 cut(s) 1219, 1637
SinI GGWCC 5 cut(s) 1026, 1343, 1393, 1884, 2180
SmiMI CAYNNNNRTG 1 cut(s) 2234
SmlI CTYRAG 1 cut(s) 998
SmoI CTYRAG 1 cut(s) 998
SphI GCATGC 1 cut(s) 2239
SseBI AGGCCT 1 cut(s) 558
SsiI CCGC 5 cut(s) 68, 642, 1491, 2124, 2166
SspI AATATT 1 cut(s) 1588
SspMI CTAG 7 cut(s) 560, 587, 1268, 1466, 1683, 1817, 1952
SstI GAGCTC 1 cut(s) 1863
StuI AGGCCT 1 cut(s) 558
StyD4I CCNGG 2 cut(s) 221, 2091
StyI CCWWGG 2 cut(s) 171, 1743
TaaI ACNGT 4 cut(s) 962, 1390, 1534, 2428
TaiI ACGT 4 cut(s) 1022, 1095, 1236, 2434
TaqI TCGA 4 cut(s) 285, 1219, 1637, 1788
TauI GCSGC 2 cut(s) 1494, 2126
TfiI GAWTC 4 cut(s) 1055, 1314, 1903, 2026
Tru1I TTAA 7 cut(s) 420, 999, 1007, 1226, 1809, 2085, 2211
Tru9I TTAA 7 cut(s) 420, 999, 1007, 1226, 1809, 2085, 2211
TscAI CASTG 2 cut(s) 2209, 2329
TseFI GTSAC 3 cut(s) 70, 1384, 1968
TseI GCWGC 5 cut(s) 120, 366, 387, 930, 1138
Tsp45I GTSAC 3 cut(s) 70, 1384, 1968
TspGWI ACGGA 3 cut(s) 70, 2130, 2365
TspRI CASTG 2 cut(s) 2209, 2329
Vha464I CTTAAG 1 cut(s) 998
VpaK11BI GGWCC 5 cut(s) 1026, 1343, 1393, 1884, 2180
XagI CCTNNNNNAGG 1 cut(s) 1556
XapI RAATTY 6 cut(s) 796, 973, 1085, 1349, 1447, 1891
XceI RCATGY 1 cut(s) 2239
XmiI GTMKAC 1 cut(s) 2347
XmnI GAANNNNTTC 1 cut(s) 658
XspI CTAG 7 cut(s) 560, 587, 1268, 1466, 1683, 1817, 1952
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.