Rorug05G0070600

LRR receptor-like serine threonine-protein kinase

Basic Information

Type: gene
Biological Identity
rosa_rugosa
GWHBQTZ00000005
Physical Location & Seq
Reverse (-)
6026308 .. 6029265
2958 bp
Loading structure...
UTR
Exon/CDS
Intron
Rorug05G0070600.1

Sequence Viewer

Length: 1203 bp
ATGGCTTCATCAAACAGACACTGGCCTAGCATGTTCAAATCCAAACCCACCCACCACCAATGGCAGCATGACGTCATCAATCCCTCTATCGTGCCAAACGGTTCATGCCACAGACCCCCATACACAACCACAACGGCTACAACATCATCAGGGATCGAAGATCAAAGGACTCCGGAGCCAAAGCCGCGGTGGAACCCTCGGCCGGAGCAGATTCGGATTCTGGAAGCTATTTTCAACTCCGGGATGGTTAATCCTCCGAGGGACGAGATAAGGAAGATCAGAGCTCAGCTCCAAGAGTACGGTCAAGTCGGTGACGCCAATGTCTTCTACTGGTTCCAGAACAGAAAATCAAGGTCCAAACACAAGCTTCGCCTGCAGCACATTAACTCAAAGCAACAGCAACAATCCCATAAACAATCACTGACTGCTGCCCCTTCATCTTCTTCTTCATCTTCGGAAAGATCCTCTCCCAACAAACAGCAGCAGCAGTCAAACAAGGCCTTCTCTATGGGGTTCTCCTCACCACCACATGTTGTTACTACTCATGATGTTTCCAACATGAACTCACCGACCGCTTCGGTCAATCAGACATCCTTTTTCCATGCTCTTCCCAACCCTGAGGTCTTGCCTGAATCAGCCTACTTCTTTCCAGTGAACAACCCTTCTTCTACCAACGGGCCGGTAGCTAGTGCTAGTTTTAGTACCACGCAAGGGTTTTGCTTTTCCGAGCTCGCGAATGTGGTTCATGTGAATAATAGTCCCGATCTTCATGGGCCTTGTACTAGTCTTTTGCTTAGTGAGATTATGAACAACAATGGGATGGCCTCAAGGAAGAATGGTCAAGATCAAGAGATGAAGGGCATCAAGATGGACCAACTGCAACAACAGCTCAATTACAATGGCGCTGTCACCACTTCTCCAACAACTACTGGTGCCGTTAACGTTGCTGTTCCATCACCCATGACTCACATTCAAGGTGTTGGTGAAGCTGGTGCTGCAATAATGGGAGCGGGAGGTGCGGCGAAATCCATGGTGTTCATAAACGACGTCGCATTCGAGGTGGCTGCGGGACCCTTCAACGTGCGTGAGGCTTTCGGAGACGACGCCGTCCTCATTCACTCTTCTGGTCACCCTGTTCTCACCAATGAGTGGGGAGTTACCGTTCACTCTCTTCACCACGGCGCATTTTATTACCTCATTTAG

Protein Analysis

400

Amino Acids

43.72

Weight (kDa)

8.7

Isoelectric Point (pI)

57.58

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
Homeodomain PF00046 61 - 120 1.5e-11 Homeodomain
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
Loading...
Style Settings
Image
Tree File
Tip: Beautify your tree with professional tools

Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.

Publication-ready

Orthologous Genes (Group: OG0000048)

Species Orthologous Gene IDs
arabidopsis_thaliana AT2G34930
fragaria_vesca FvH4_3g12670 FvH4_3g12672 FvH4_3g12740 FvH4_3g12742 FvH4_3g12770 FvH4_3g12770 FvH4_3g12860 FvH4_3g12890 FvH4_3g13431 FvH4_3g13433 FvH4_3g13435 FvH4_3g13470 FvH4_3g13470 FvH4_3g13480 FvH4_3g13562 FvH4_3g13580 FvH4_3g13600 FvH4_3g13600 FvH4_3g13600 FvH4_3g13600 FvH4_3g13600 FvH4_3g13600 FvH4_3g13610 FvH4_3g13620 FvH4_3g13620 FvH4_3g23240 FvH4_3g32910 FvH4_3g35070 FvH4_3g45520 FvH4_5g08430 FvH4_5g08450 FvH4_6g53230 FvH4_6g53300
malus_domestica MD05G1217600.v1.1 MD05G1217700.v1.1 MD05G1224700.v1.1 MD05G1225100.v1.1 MD05G1225300.v1.1 MD05G1225400.v1.1 MD05G1235900.v1.1 MD05G1236100.v1.1 MD05G1236300.v1.1 MD05G1237200.v1.1 MD05G1241600.v1.1 MD05G1245700.v1.1 MD05G1245800.v1.1 MD05G1245900.v1.1 MD05G1246000.v1.1 MD05G1246100.v1.1 MD05G1246300.v1.1 MD05G1246400.v1.1 MD05G1246500.v1.1 MD05G1248100.v1.1 MD05G1248200.v1.1 MD05G1264300.v1.1 MD05G1275900.v1.1 MD07G1051400.v1.1 MD09G1012600.v1.1 MD09G1012700.v1.1 MD09G1012800.v1.1 MD10G1221400.v1.1 MD10G1221500.v1.1 MD10G1221600.v1.1 MD10G1221900.v1.1 MD10G1222200.v1.1 MD10G1222400.v1.1 MD10G1222500.v1.1 MD10G1222900.v1.1 MD10G1223000.v1.1 MD10G1223100.v1.1 MD10G1223500.v1.1 MD10G1228000.v1.1 MD12G1019600.v1.1 MD12G1020000.v1.1 MD12G1020100.v1.1 MD17G1013200.v1.1 MD17G1013300.v1.1 MD17G1013400.v1.1
prunus_persica Prupe.1G060500_v2.0.a1 Prupe.1G100100_v2.0.a1 Prupe.3G124000_v2.0.a1 Prupe.3G304400_v2.0.a1 Prupe.4G116800_v2.0.a1 Prupe.4G116900_v2.0.a1 Prupe.4G117000_v2.0.a1 Prupe.4G121800_v2.0.a1 Prupe.4G121900_v2.0.a1 Prupe.4G122000_v2.0.a1 Prupe.4G122100_v2.0.a1 Prupe.4G122200_v2.0.a1 Prupe.4G122300_v2.0.a1 Prupe.4G122500_v2.0.a1 Prupe.4G122600_v2.0.a1 Prupe.4G122800_v2.0.a1 Prupe.4G122900_v2.0.a1 Prupe.4G123000_v2.0.a1 Prupe.4G123100_v2.0.a1 Prupe.4G123200_v2.0.a1 Prupe.4G131500_v2.0.a1 Prupe.4G131600_v2.0.a1 Prupe.7G032500_v2.0.a1 Prupe.7G032900_v2.0.a1 Prupe.7G033000_v2.0.a1 Prupe.7G033100_v2.0.a1 Prupe.7G033300_v2.0.a1 Prupe.7G033600_v2.0.a1 Prupe.7G034600_v2.0.a1 Prupe.7G040200_v2.0.a1 Prupe.7G059200_v2.0.a1
pyrus_communis pycom05g20580 pycom05g20590 pycom05g20760 pycom05g20800 pycom05g21280 pycom05g21290 pycom05g21820 pycom05g21830 pycom05g22180 pycom05g22190 pycom05g22210 pycom05g22450 pycom05g22460 pycom05g22470 pycom05g22480 pycom05g22490 pycom05g23770 pycom05g23780 pycom05g24050 pycom05g24060 pycom07g03910 pycom10g18700 pycom10g18720 pycom10g18730 pycom10g18740 pycom10g19150 pycom111g01060 pycom12g01660 pycom12g01690 pycom12g01720 pycom12g01740 pycom12g01750 pycom12g01770 pycom12g01810 pycom12g01820 pycom12g01830 pycom12g01840 pycom12g01870 pycom12g01900 pycom17g01060 pycom17g01070
rosa_chinensis RchiOBHm_Chr1g0315041 RchiOBHm_Chr1g0315051 RchiOBHm_Chr1g0315071 RchiOBHm_Chr1g0315161 RchiOBHm_Chr1g0315211 RchiOBHm_Chr1g0315251 RchiOBHm_Chr1g0315321 RchiOBHm_Chr1g0315391 RchiOBHm_Chr1g0315451 RchiOBHm_Chr1g0315481 RchiOBHm_Chr1g0315551 RchiOBHm_Chr1g0315601 RchiOBHm_Chr1g0315621 RchiOBHm_Chr1g0359221 RchiOBHm_Chr2g0142981 RchiOBHm_Chr2g0143001 RchiOBHm_Chr2g0143061 RchiOBHm_Chr2g0143091 RchiOBHm_Chr2g0175321 RchiOBHm_Chr2g0175341 RchiOBHm_Chr2g0175361 RchiOBHm_Chr2g0175371 RchiOBHm_Chr3g0470491 RchiOBHm_Chr3g0480881 RchiOBHm_Chr3g0485511 RchiOBHm_Chr5g0020741 RchiOBHm_Chr5g0020901 RchiOBHm_Chr5g0020931 RchiOBHm_Chr5g0020941 RchiOBHm_Chr5g0020961 RchiOBHm_Chr5g0020971 RchiOBHm_Chr5g0021451 RchiOBHm_Chr5g0021531 RchiOBHm_Chr5g0021831 RchiOBHm_Chr5g0021841 RchiOBHm_Chr5g0021931 RchiOBHm_Chr5g0021941 RchiOBHm_Chr5g0021981 RchiOBHm_Chr5g0021991 RchiOBHm_Chr5g0022011 RchiOBHm_Chr5g0022181 RchiOBHm_Chr5g0022191 RchiOBHm_Chr5g0022211 RchiOBHm_Chr5g0022221 RchiOBHm_Chr5g0022231 RchiOBHm_Chr5g0022291 RchiOBHm_Chr5g0022301 RchiOBHm_Chr5g0022331 RchiOBHm_Chr5g0022361 RchiOBHm_Chr5g0022371 RchiOBHm_Chr5g0022381 RchiOBHm_Chr5g0022401 RchiOBHm_Chr5g0022431 RchiOBHm_Chr5g0022451 RchiOBHm_Chr5g0022541 RchiOBHm_Chr5g0022591 RchiOBHm_Chr5g0022601 RchiOBHm_Chr5g0022701 RchiOBHm_Chr5g0022741 RchiOBHm_Chr5g0022791 RchiOBHm_Chr5g0022811 RchiOBHm_Chr5g0022851 RchiOBHm_Chr5g0029441 RchiOBHm_Chr5g0041631 RchiOBHm_Chr5g0069391 RchiOBHm_Chr6g0273811 RchiOBHm_Chr6g0273831 RchiOBHm_Chr6g0275331 RchiOBHm_Chr7g0219061
rosa_laevigata RLG00000002463 RLG00000020007 RLG00000020008 RLG00000022320 RLG00000022321 RLG00000023446 RLG00000030742 RLG00000030743 RLG00000030747 RLG00000032557 RLG00000032564 RLG00000032571 RLG00000032573 RLG00000032574 RLG00000032612 RLG00000032633 RLG00000032636 RLG00000032638 RLG00000032650 RLG00000032651 RLG00000032652 RLG00000032653 RLG00000032655 RLG00000032673 RLG00000032678 RLG00000032769 RLG00000032857 RLG00000033168 RLG00000033465 RLG00000034086 RLG00000034222 RLG00000035290
rosa_multiflora Rmu_co8143358.1_g000001 Rmu_co8518791.1_g000001 Rmu_sc0000178.1_g000008 Rmu_sc0000178.1_g000014 Rmu_sc0000401.1_g000005 Rmu_sc0000401.1_g000013 Rmu_sc0000401.1_g000017 Rmu_sc0000401.1_g000018 Rmu_sc0000401.1_g000024 Rmu_sc0000401.1_g000025 Rmu_sc0000576.1_g000020 Rmu_sc0001585.1_g000003 Rmu_sc0001585.1_g000005 Rmu_sc0001585.1_g000008 Rmu_sc0001784.1_g000006 Rmu_sc0001784.1_g000011 Rmu_sc0001784.1_g000022 Rmu_sc0001784.1_g000028 Rmu_sc0002052.1_g000004 Rmu_sc0002052.1_g000011 Rmu_sc0002277.1_g000003 Rmu_sc0002277.1_g000006 Rmu_sc0002277.1_g000024 Rmu_sc0002658.1_g000012 Rmu_sc0003512.1_g000004 Rmu_sc0003512.1_g000007 Rmu_sc0004180.1_g000016 Rmu_sc0004180.1_g000029 Rmu_sc0004180.1_g000034 Rmu_sc0005639.1_g000008 Rmu_sc0005639.1_g000023 Rmu_sc0006070.1_g000016 Rmu_sc0006070.1_g000017 Rmu_sc0006966.1_g000021 Rmu_sc0006966.1_g000023 Rmu_sc0007239.1_g000003 Rmu_sc0008460.1_g000010 Rmu_sc0009984.1_g000008 Rmu_sc0010181.1_g000005 Rmu_sc0010181.1_g000010 Rmu_sc0010503.1_g000006 Rmu_sc0011646.1_g000003 Rmu_sc0012984.1_g000011 Rmu_sc0016972.1_g000005 Rmu_sc0016972.1_g000008 Rmu_sc0023070.1_g000003 Rmu_sc0025660.1_g000001 Rmu_ssc0000322.1_g000019
rosa_roxburghii Rroxscaffold_1G00038860 Rroxscaffold_1G00053490 Rroxscaffold_1G00053500 Rroxscaffold_1G00054230 Rroxscaffold_1G00056460 Rroxscaffold_1G00056470 Rroxscaffold_1G00056480 Rroxscaffold_1G00056500 Rroxscaffold_1G00056510 Rroxscaffold_1G00056620 Rroxscaffold_1G00056690 Rroxscaffold_1G00056710 Rroxscaffold_1G00056720 Rroxscaffold_1G00056730 Rroxscaffold_1G00056740 Rroxscaffold_1G00056750 Rroxscaffold_1G00056760 Rroxscaffold_1G00056870 Rroxscaffold_1G00056900 Rroxscaffold_1G00057120 Rroxscaffold_1G00057560 Rroxscaffold_2G00077430 Rroxscaffold_2G00102160 Rroxscaffold_3G00231420 Rroxscaffold_3G00231430 Rroxscaffold_4G00297230 Rroxscaffold_4G00331570 Rroxscaffold_6G00396700 Rroxscaffold_6G00400940 Rroxscaffold_7G00192740
rosa_rugosa Rorug01G0004400 Rorug01G0004500 Rorug02G0377600 Rorug02G0378000 Rorug02G0582800 Rorug02G0583400 Rorug03G0187000 Rorug03G0218800 Rorug04G0081200 Rorug05G0062700 Rorug05G0062700 Rorug05G0063100 Rorug05G0063200 Rorug05G0063200 Rorug05G0063200 Rorug05G0067000 Rorug05G0069700 Rorug05G0069900 Rorug05G0070000 Rorug05G0070100 Rorug05G0070300 Rorug05G0070400 Rorug05G0070600 Rorug05G0070600 Rorug05G0072300 Rorug05G0072400 Rorug05G0072500 Rorug05G0072500 Rorug05G0072600.1 Rorug05G0072700 Rorug05G0072800 Rorug05G0072800 Rorug05G0072900 Rorug05G0073000 Rorug05G0073000 Rorug05G0073400 Rorug05G0073400 Rorug05G0073400 Rorug05G0074800 Rorug05G0075000 Rorug05G0114300 Rorug05G0194200 Rorug06G0097800
rosa_samantha Rh2AG401400 Rh2CG387600 Rh2CG417000 Rh2CG637400 Rh5CG169600 Rh5CG172100 Rh5CG175200 Rh5CG317100 Rh6DG187900
rosa_wichuraiana Rw1G000750 Rw1G000790 Rw1G000820 Rw1G000860 Rw1G000880 Rw1G000910 Rw2G035180 Rw2G035200 Rw2G035240 Rw2G054370 Rw2G054380 Rw5G013570 Rw5G013580 Rw5G013590 Rw5G013910 Rw5G013980 Rw5G014110 Rw5G014120 Rw5G014280 Rw5G014310 Rw5G014400 Rw5G014420 Rw5G014440 Rw5G014460 Rw5G014480 Rw5G014500 Rw5G014520 Rw5G014530 Rw5G042390

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AasI GACNNNNNNGTC 2 cut(s) 320, 1106
AatII GACGTC 2 cut(s) 75, 1050
AccB1I GGYRCC 1 cut(s) 932
AccB7I CCANNNNNTGG 1 cut(s) 1149
AccBSI CCGCTC 1 cut(s) 1010
AccII CGCG 2 cut(s) 187, 734
AccIII TCCGGA 1 cut(s) 172
AciI CCGC 6 cut(s) 185, 187, 573, 1010, 1019, 1067
AclI AACGTT 1 cut(s) 942
AclWI GGATC 2 cut(s) 161, 456
AcoI YGGCCR 1 cut(s) 200
AcyI GRCGYC 4 cut(s) 72, 315, 1047, 1104
AfaI GTAC 3 cut(s) 299, 703, 781
AfiI CCNNNNNNNGG 3 cut(s) 202, 711, 1149
AflIII ACRYGT 1 cut(s) 529
AgsI TTSAA 4 cut(s) 37, 235, 974, 1078
AhlI ACTAGT 1 cut(s) 782
AloI GAACNNNNNNTCC 2 cut(s) 1146, 1178
AluBI AGCT 8 cut(s) 227, 284, 289, 367, 686, 730, 889, 989
AluI AGCT 8 cut(s) 227, 284, 289, 367, 686, 730, 889, 989
Alw21I GWGCWC 2 cut(s) 286, 732
Alw26I GTCTC 1 cut(s) 1092
AlwI GGATC 2 cut(s) 161, 456
AlwNI CAGNNNCTG 1 cut(s) 21
Aor13HI TCCGGA 1 cut(s) 172
AoxI GGCC 6 cut(s) 23, 200, 498, 677, 773, 822
ApeKI GCWGC 7 cut(s) 64, 376, 428, 481, 484, 995, 1064
ArsI GACNNNNNNTTYG 2 cut(s) 1037, 1069
AspLEI GCGC 2 cut(s) 905, 1184
AspS9I GGNCC 5 cut(s) 354, 677, 773, 871, 1070
AsuC2I CCSGG 1 cut(s) 241
AsuHPI GGTGA 9 cut(s) 323, 513, 558, 901, 948, 995, 1121, 1132, 1166
AvaII GGWCC 3 cut(s) 354, 871, 1070
AxyI CCTNAGG 1 cut(s) 618
BanI GGYRCC 1 cut(s) 932
BanII GRGCYC 2 cut(s) 286, 732
BbsI GAAGAC 1 cut(s) 316
Bbv12I GWGCWC 2 cut(s) 286, 732
BbvI GCAGC 7 cut(s) 76, 388, 415, 493, 496, 982, 1051
BccI CCATC 4 cut(s) 238, 814, 862, 961
BceAI ACGGC 4 cut(s) 150, 920, 1091, 1195
BcgI CGANNNNNNTGC 2 cut(s) 1046, 1080
BcnI CCSGG 1 cut(s) 241
BcoDI GTCTC 1 cut(s) 1092
BcuI ACTAGT 1 cut(s) 782
BfaI CTAG 4 cut(s) 27, 687, 693, 783
BfmI CTRYAG 1 cut(s) 374
BfoI RGCGCY 1 cut(s) 906
BisI GCNGC 9 cut(s) 65, 185, 377, 429, 482, 485, 996, 1020, 1065
BlpI GCTNAGC 1 cut(s) 285
BlsI GCNGC 9 cut(s) 66, 186, 378, 430, 483, 486, 997, 1021, 1066
Bme1390I CCNGG 1 cut(s) 241
Bme18I GGWCC 3 cut(s) 354, 871, 1070
BmgT120I GGNCC 5 cut(s) 354, 677, 773, 871, 1070
BmiI GGNNCC 6 cut(s) 177, 194, 335, 934, 1071, 1072
BmrFI CCNGG 1 cut(s) 241
BmsI GCATC 1 cut(s) 870
BpiI GAAGAC 1 cut(s) 316
BplI GAGNNNNNCTC 2 cut(s) 273, 305
Bpu1102I GCTNAGC 1 cut(s) 285
BpuEI CTTGAG 1 cut(s) 811
BpuMI CCSGG 1 cut(s) 241
BsaHI GRCGYC 4 cut(s) 72, 315, 1047, 1104
BsaJI CCNNGG 5 cut(s) 185, 197, 257, 1029, 1177
BsaWI WCCGGW 1 cut(s) 172
BsaXI ACNNNNNCTCC 4 cut(s) 901, 931, 1146, 1176
Bsc4I CCNNNNNNNGG 3 cut(s) 202, 711, 1149
Bse118I RCCGGY 1 cut(s) 679
Bse1I ACTGG 4 cut(s) 26, 335, 650, 934
Bse21I CCTNAGG 1 cut(s) 618
BseAI TCCGGA 1 cut(s) 172
BseDI CCNNGG 5 cut(s) 185, 197, 257, 1029, 1177
BseGI GGATG 3 cut(s) 249, 590, 825
BseLI CCNNNNNNNGG 3 cut(s) 202, 711, 1149
BseMII CTCAG 2 cut(s) 299, 609
BseNI ACTGG 4 cut(s) 26, 335, 650, 934
BseRI GAGGAG 1 cut(s) 508
BseX3I CGGCCG 1 cut(s) 200
BseXI GCAGC 7 cut(s) 76, 388, 415, 493, 496, 982, 1051
Bsh1236I CGCG 2 cut(s) 187, 734
Bsh1285I CGRYCG 2 cut(s) 203, 573
BshFI GGCC 6 cut(s) 25, 202, 500, 679, 775, 824
BshNI GGYRCC 1 cut(s) 932
BsiEI CGRYCG 2 cut(s) 203, 573
BsiHKAI GWGCWC 2 cut(s) 286, 732
BsiSI CCGG 4 cut(s) 173, 203, 240, 680
BslFI GGGAC 3 cut(s) 275, 744, 1083
BslI CCNNNNNNNGG 3 cut(s) 202, 711, 1149
BsmAI GTCTC 1 cut(s) 1092
BsmBI CGTCTC 1 cut(s) 1092
BsmFI GGGAC 3 cut(s) 275, 744, 1083
BsmI GAATGC 1 cut(s) 1052
BsnI GGCC 6 cut(s) 25, 202, 500, 679, 775, 824
Bsp1286I GDGCHC 2 cut(s) 286, 732
Bsp13I TCCGGA 1 cut(s) 172
Bsp143I GATC 6 cut(s) 153, 160, 276, 461, 763, 844
Bsp1720I GCTNAGC 1 cut(s) 285
Bsp19I CCATGG 1 cut(s) 1029
Bsp68I TCGCGA 1 cut(s) 734
BspACI CCGC 6 cut(s) 185, 187, 573, 1010, 1019, 1067
BspANI GGCC 6 cut(s) 25, 202, 500, 679, 775, 824
BspCNI CTCAG 2 cut(s) 298, 610
BspEI TCCGGA 1 cut(s) 172
BspFNI CGCG 2 cut(s) 187, 734
BspHI TCATGA 1 cut(s) 544
BspLI GGNNCC 6 cut(s) 177, 194, 335, 934, 1071, 1072
BspMAI CTGCAG 1 cut(s) 378
BspPI GGATC 2 cut(s) 161, 456
BspQI GCTCTTC 1 cut(s) 612
BspT107I GGYRCC 1 cut(s) 932
BsrBI CCGCTC 1 cut(s) 1010
BsrFI RCCGGY 1 cut(s) 679
BsrI ACTGG 4 cut(s) 26, 335, 650, 934
BssAI RCCGGY 1 cut(s) 679
BssECI CCNNGG 5 cut(s) 185, 197, 257, 1029, 1177
BssMI GATC 6 cut(s) 153, 160, 276, 461, 763, 844
BssNI GRCGYC 4 cut(s) 72, 315, 1047, 1104
BssT1I CCWWGG 1 cut(s) 1029
Bst4CI ACNGT 3 cut(s) 101, 302, 1162
Bst6I CTCTTC 3 cut(s) 612, 1126, 1176
BstACI GRCGYC 4 cut(s) 72, 315, 1047, 1104
BstC8I GCNNGC 2 cut(s) 374, 732
BstDEI CTNAG 3 cut(s) 285, 618, 794
BstDSI CCRYGG 3 cut(s) 185, 1029, 1177
BstEII GGTNACC 1 cut(s) 1127
BstF5I GGATG 3 cut(s) 249, 590, 825
BstFNI CGCG 2 cut(s) 187, 734
BstH2I RGCGCY 1 cut(s) 906
BstHHI GCGC 2 cut(s) 905, 1184
BstKTI GATC 6 cut(s) 156, 163, 279, 464, 766, 847
BstMAI GTCTC 1 cut(s) 1092
BstMBI GATC 6 cut(s) 153, 160, 276, 461, 763, 844
BstMCI CGRYCG 2 cut(s) 203, 573
BstMWI GCNNNNNNNGC 5 cut(s) 184, 373, 886, 995, 1016
BstNSI RCATGY 2 cut(s) 34, 533
BstPI GGTNACC 1 cut(s) 1127
BstSCI CCNGG 1 cut(s) 239
BstSFI CTRYAG 1 cut(s) 374
BstUI CGCG 2 cut(s) 187, 734
BstV1I GCAGC 7 cut(s) 76, 388, 415, 493, 496, 982, 1051
BstV2I GAAGAC 1 cut(s) 316
BstX2I RGATCY 1 cut(s) 461
BstYI RGATCY 1 cut(s) 461
BstZI CGGCCG 1 cut(s) 200
Bsu36I CCTNAGG 1 cut(s) 618
BsuRI GGCC 6 cut(s) 25, 202, 500, 679, 775, 824
BtgI CCRYGG 3 cut(s) 185, 1029, 1177
BtsCI GGATG 3 cut(s) 249, 590, 825
BtsIMutI CAGTG 3 cut(s) 19, 419, 657
BtuMI TCGCGA 1 cut(s) 734
Cac8I GCNNGC 2 cut(s) 374, 732
CaiI CAGNNNCTG 1 cut(s) 21
CciI TCATGA 1 cut(s) 544
CfoI GCGC 2 cut(s) 905, 1184
Cfr10I RCCGGY 1 cut(s) 679
Cfr13I GGNCC 5 cut(s) 354, 677, 773, 871, 1070
Cfr42I CCGCGG 1 cut(s) 188
CseI GACGC 2 cut(s) 323, 1112
Csp6I GTAC 3 cut(s) 298, 702, 780
CviQI GTAC 3 cut(s) 298, 702, 780
DdeI CTNAG 3 cut(s) 285, 618, 794
DpnI GATC 6 cut(s) 155, 162, 278, 463, 765, 846
DpnII GATC 6 cut(s) 153, 160, 276, 461, 763, 844
DrdI GACNNNNNNGTC 2 cut(s) 320, 1106
DseDI GACNNNNNNGTC 2 cut(s) 320, 1106
EaeI YGGCCR 1 cut(s) 200
EagI CGGCCG 1 cut(s) 200
Eam1104I CTCTTC 3 cut(s) 612, 1126, 1176
EarI CTCTTC 3 cut(s) 612, 1126, 1176
Ecl136II GAGCTC 2 cut(s) 284, 730
EclXI CGGCCG 1 cut(s) 200
Eco130I CCWWGG 1 cut(s) 1029
Eco147I AGGCCT 1 cut(s) 500
Eco24I GRGCYC 2 cut(s) 286, 732
Eco47I GGWCC 3 cut(s) 354, 871, 1070
Eco52I CGGCCG 1 cut(s) 200
Eco53kI GAGCTC 2 cut(s) 284, 730
Eco81I CCTNAGG 1 cut(s) 618
Eco91I GGTNACC 1 cut(s) 1127
EcoICRI GAGCTC 2 cut(s) 284, 730
EcoO109I RGGNCCY 1 cut(s) 1070
EcoO65I GGTNACC 1 cut(s) 1127
EcoT14I CCWWGG 1 cut(s) 1029
EcoT38I GRGCYC 2 cut(s) 286, 732
ErhI CCWWGG 1 cut(s) 1029
Esp3I CGTCTC 1 cut(s) 1092
FaqI GGGAC 3 cut(s) 275, 744, 1083
FauI CCCGC 2 cut(s) 1003, 1060
Fnu4HI GCNGC 9 cut(s) 65, 185, 377, 429, 482, 485, 996, 1020, 1065
FokI GGATG 3 cut(s) 256, 577, 832
FriOI GRGCYC 2 cut(s) 286, 732
Fsp4HI GCNGC 9 cut(s) 65, 185, 377, 429, 482, 485, 996, 1020, 1065
FspBI CTAG 4 cut(s) 27, 687, 693, 783
GlaI GCGC 2 cut(s) 904, 1183
GluI GCNGC 9 cut(s) 65, 185, 377, 429, 482, 485, 996, 1020, 1065
HaeII RGCGCY 1 cut(s) 906
HaeIII GGCC 6 cut(s) 25, 202, 500, 679, 775, 824
HapII CCGG 4 cut(s) 173, 203, 240, 680
HgaI GACGC 2 cut(s) 323, 1112
HhaI GCGC 2 cut(s) 905, 1184
Hin1I GRCGYC 4 cut(s) 72, 315, 1047, 1104
Hin6I GCGC 2 cut(s) 903, 1182
HinP1I GCGC 2 cut(s) 903, 1182
HincII GTYRAC 1 cut(s) 940
HindII GTYRAC 1 cut(s) 940
HindIII AAGCTT 1 cut(s) 365
HinfI GANTC 5 cut(s) 169, 211, 217, 632, 964
HpaI GTTAAC 1 cut(s) 940
HpaII CCGG 4 cut(s) 173, 203, 240, 680
HphI GGTGA 9 cut(s) 323, 513, 558, 901, 948, 995, 1121, 1132, 1166
Hpy166II GTNNAC 3 cut(s) 655, 940, 1165
Hpy188I TCNGA 7 cut(s) 216, 258, 281, 457, 588, 727, 1097
Hpy188III TCNNGA 9 cut(s) 173, 221, 337, 545, 733, 761, 842, 848, 865
Hpy8I GTNNAC 3 cut(s) 655, 940, 1165
Hpy99I CGWCG 3 cut(s) 1049, 1052, 1106
HpyAV CCTTC 5 cut(s) 444, 511, 672, 850, 1084
HpyCH4III ACNGT 3 cut(s) 101, 302, 1162
HpyCH4IV ACGT 4 cut(s) 72, 942, 1047, 1080
HpyCH4V TGCA 3 cut(s) 376, 880, 998
HpyF10VI GCNNNNNNNGC 5 cut(s) 184, 373, 886, 995, 1016
HpyF3I CTNAG 3 cut(s) 285, 618, 794
HpySE526I ACGT 4 cut(s) 72, 942, 1047, 1080
Hsp92I GRCGYC 4 cut(s) 72, 315, 1047, 1104
HspAI GCGC 2 cut(s) 903, 1182
KflI GGGWCCC 1 cut(s) 1070
Kpn2I TCCGGA 1 cut(s) 172
KspAI GTTAAC 1 cut(s) 940
KspI CCGCGG 1 cut(s) 188
Kzo9I GATC 6 cut(s) 153, 160, 276, 461, 763, 844
LguI GCTCTTC 1 cut(s) 612
LmnI GCTCC 4 cut(s) 175, 205, 294, 1007
Lsp1109I GCAGC 7 cut(s) 76, 388, 415, 493, 496, 982, 1051
LweI GCATC 1 cut(s) 870
MaeI CTAG 4 cut(s) 27, 687, 693, 783
MaeII ACGT 4 cut(s) 72, 942, 1047, 1080
MaeIII GTNAC 5 cut(s) 311, 535, 907, 1127, 1156
MalI GATC 6 cut(s) 155, 162, 278, 463, 765, 846
MbiI CCGCTC 1 cut(s) 1010
MboI GATC 6 cut(s) 153, 160, 276, 461, 763, 844
MflI RGATCY 1 cut(s) 461
MhlI GDGCHC 2 cut(s) 286, 732
MluCI AATT 1 cut(s) 892
MlyI GAGTC 2 cut(s) 163, 958
MmeI TCCRAC 2 cut(s) 579, 944
MroI TCCGGA 1 cut(s) 172
MseI TTAA 3 cut(s) 249, 384, 939
MslI CAYNNNNRTG 1 cut(s) 866
MspA1I CMGCKG 1 cut(s) 187
MspI CCGG 4 cut(s) 173, 203, 240, 680
MspR9I CCNGG 1 cut(s) 241
Mva1269I GAATGC 1 cut(s) 1052
MvnI CGCG 2 cut(s) 187, 734
MwoI GCNNNNNNNGC 5 cut(s) 184, 373, 886, 995, 1016
NciI CCSGG 1 cut(s) 241
NcoI CCATGG 1 cut(s) 1029
NdeII GATC 6 cut(s) 153, 160, 276, 461, 763, 844
NlaIV GGNNCC 6 cut(s) 177, 194, 335, 934, 1071, 1072
NmeAIII GCCGAG 1 cut(s) 178
NmuCI GTSAC 3 cut(s) 311, 907, 1127
NruI TCGCGA 1 cut(s) 734
NspI RCATGY 2 cut(s) 34, 533
PagI TCATGA 1 cut(s) 544
PceI AGGCCT 1 cut(s) 500
PciI ACATGT 1 cut(s) 529
PciSI GCTCTTC 1 cut(s) 612
PcsI WCGNNNNNNNCGW 1 cut(s) 1053
PctI GAATGC 1 cut(s) 1052
PfeI GAWTC 3 cut(s) 211, 217, 632
PflFI GACNNNGTC 1 cut(s) 1106
PflMI CCANNNNNTGG 1 cut(s) 1149
PfoI TCCNGGA 1 cut(s) 239
PkrI GCNGC 9 cut(s) 66, 186, 378, 430, 483, 486, 997, 1021, 1066
PleI GAGTC 2 cut(s) 163, 958
PpsI GAGTC 2 cut(s) 163, 958
PpuMI RGGWCCY 1 cut(s) 1070
PscI ACATGT 1 cut(s) 529
Psp124BI GAGCTC 2 cut(s) 286, 732
Psp1406I AACGTT 1 cut(s) 942
Psp5II RGGWCCY 1 cut(s) 1070
PspEI GGTNACC 1 cut(s) 1127
PspN4I GGNNCC 6 cut(s) 177, 194, 335, 934, 1071, 1072
PspPI GGNCC 5 cut(s) 354, 677, 773, 871, 1070
PspPPI RGGWCCY 1 cut(s) 1070
PstI CTGCAG 1 cut(s) 378
PstNI CAGNNNCTG 1 cut(s) 21
PsuI RGATCY 1 cut(s) 461
PsyI GACNNNGTC 1 cut(s) 1106
RruI TCGCGA 1 cut(s) 734
RsaI GTAC 3 cut(s) 299, 703, 781
RsaNI GTAC 3 cut(s) 298, 702, 780
RseI CAYNNNNRTG 1 cut(s) 866
SacI GAGCTC 2 cut(s) 286, 732
SacII CCGCGG 1 cut(s) 188
SapI GCTCTTC 1 cut(s) 612
SaqAI TTAA 3 cut(s) 249, 384, 939
SatI GCNGC 9 cut(s) 65, 185, 377, 429, 482, 485, 996, 1020, 1065
Sau3AI GATC 6 cut(s) 153, 160, 276, 461, 763, 844
Sau96I GGNCC 5 cut(s) 354, 677, 773, 871, 1070
SchI GAGTC 2 cut(s) 163, 958
ScrFI CCNGG 1 cut(s) 241
SduI GDGCHC 2 cut(s) 286, 732
SfaNI GCATC 1 cut(s) 870
SfcI CTRYAG 1 cut(s) 374
Sfr303I CCGCGG 1 cut(s) 188
SgrBI CCGCGG 1 cut(s) 188
SinI GGWCC 3 cut(s) 354, 871, 1070
SmiMI CAYNNNNRTG 1 cut(s) 866
SmlI CTYRAG 1 cut(s) 826
SmoI CTYRAG 1 cut(s) 826
SpeI ACTAGT 1 cut(s) 782
Sse9I AATT 1 cut(s) 892
SseBI AGGCCT 1 cut(s) 500
SsiI CCGC 6 cut(s) 185, 187, 573, 1010, 1019, 1067
SspMI CTAG 4 cut(s) 27, 687, 693, 783
SstI GAGCTC 2 cut(s) 286, 732
StuI AGGCCT 1 cut(s) 500
StyD4I CCNGG 1 cut(s) 239
StyI CCWWGG 1 cut(s) 1029
TaaI ACNGT 3 cut(s) 101, 302, 1162
TaiI ACGT 4 cut(s) 75, 945, 1050, 1083
TaqI TCGA 2 cut(s) 156, 1056
TaqII GACCGA 1 cut(s) 568
TasI AATT 1 cut(s) 892
TatI WGTACW 1 cut(s) 779
TauI GCSGC 2 cut(s) 187, 1022
TfiI GAWTC 3 cut(s) 211, 217, 632
Tru1I TTAA 3 cut(s) 249, 384, 939
Tru9I TTAA 3 cut(s) 249, 384, 939
TscAI CASTG 3 cut(s) 26, 426, 657
TseFI GTSAC 3 cut(s) 311, 907, 1127
TseI GCWGC 7 cut(s) 64, 376, 428, 481, 484, 995, 1064
Tsp45I GTSAC 3 cut(s) 311, 907, 1127
TspDTI ATGAA 9 cut(s) 93, 426, 438, 575, 734, 758, 821, 869, 1027
TspRI CASTG 3 cut(s) 26, 426, 657
Tth111I GACNNNGTC 1 cut(s) 1106
Van91I CCANNNNNTGG 1 cut(s) 1149
VpaK11BI GGWCC 3 cut(s) 354, 871, 1070
XceI RCATGY 2 cut(s) 34, 533
XcmI CCANNNNNNNNNTGG 1 cut(s) 186
XspI CTAG 4 cut(s) 27, 687, 693, 783
ZraI GACGTC 2 cut(s) 73, 1048
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.