pycom05g23770

LRR receptor-like serine threonine-protein kinase

Basic Information

Type: gene
Biological Identity
pyrus_communis
Chr5
Physical Location & Seq
Forward (+)
25543704 .. 25547216
3513 bp
Loading structure...
UTR
Exon/CDS
Intron
pycom05g23770.6

Sequence Viewer

Length: 3165 bp
ATGTGTAATAATATGATAGTCCAATATTATGACTGGAGGCACATGATGGAAAACTTAACAGAATTTGCACGGGATTACAAATTTACGATTTTGGAAAGTTGGTACGAAAAATTGCTTAAAATTTTAGTTTTTCAAAAAAATTCTCTATACAAATATTCTTGCACTGTGTCATTGAAACAAACATCGGAATTATGTCTCTCTACCTCTCGTTGCTGTAAACCAGATTTTCTACTCTTTAACAGACGCTGGAGAAGACTCACTATTCAAAGTCTCCGCGGCATATGGATTTTCCACCAAAGACTAATTGCTGTGCTTAGACTTCTGCGGCTAGCAATCTCCATCATGCATGCTTTTTCATTTGGTCCTACACAGCTTCATAAGAATTCGGAAACTTCCATAGAAAGATCTCTCGTGGCAATGACGATTTTTGGAGTGTTAATAACATTTCCATTACATAGAAAATTTGTAAATAACGACATGACAATCATATCCAAGTCAAGAGTACTAGCGAGTGTGGACCATTTTCGTTCGAAAAAATATAAAACATATCTAAATCCGTTTTTAGGTTTCAAGGACCCAGCTGTGTACACAATGGACTTGCAAACTTGGAAAAGGGGTTGTGAACACACGACTTTCGTTCTAAACGTTACCATCACCAAAGCATGGCTAAGAAAATTGTGTGTGATAATGGACAGCCACTATCACCTCAGTATTGCTCACTATTTCCTTCTTTTCCTTTTGGCGTCTTCCTACATGCGGAGTACTACTCAACTCTGTTTCTGTTTGGCCAGTGGTGAACTTTCAAGCAGTGTGGAAACAAATTCGTGCATCAACGAAGAAAGGCGAGCGCTTCTCATCTTTAAACAACATCTTGTTGATCATTCTGGCAGGCTTTCCTCTTGGGTAGGGCACGATTGCTGTCGATGGGAAGGGATTTCATGCAACAATCTCACCGGTCATGTCGTGAAGATGGACCTCCGGAATCGATTGGCAGATGAAATGGCTCAATTGAGAGGTAAGATAAATGCTTCTCTGTTGAGCTTGAAACATTTAAATTACCTGGACCTAAGCTTTAATGATTTTCATCGCATTCAAGTTCCTAAGTTCTTCGGGGAGCTTAAAAGTTTGCAATATCTCAATCTCTCCTCTGCGTCATTTGGAGGAGAGATTCCCCCTTCTCTTGGTAACCTGTCAAGCCTCAATTTTCTTGACCTTGGGTGGAATCAACTCTCATCTTCCAGAAATTTGAATTGGCTGTCTCGCCTCTCTTCTCTAAAATACCTTGACCTCGGATGGGTGGATCTTAGCACCACAGGAGTCAATTGGGCGTATGCTGTTAATATGCTTCCTTCATTAGCAGAGTTACACTTATCTGATTGCCATATTGAAAGCATTTCACTCTCACTGCAGAGCATTAACTTGACATCACTTTTTAATCTGACCAGCCTCATAACACTTGATCTATCCTTGAATCATTTCGGTGATCCCTTCCCAAGTGAATTTGCAAACTTCAAATCTCTGGAACACCTTGATTTATCTAATACAGGCTTAAAAGGTCAAATTCCTAAAGTCATTGGAAATTTGTGCAAGCTAAAGGTCTTAAGTCTTTCTTTGAACAAATTTAGTGGGGGGCTTGAAGAGTTTTGGAGAAGTATCTCAAATTGTTCAAATATCGCATTAGAGTCACTAGATTTGTCTTTTTGTGAGCTGAGAAGCCAACTGCCGGTCTCCTTAGGAATGTTTAAAAGTTTGCAGAATCTCAAACTTCGTGGAAACGCTTTGGGGGGCTCAATTCCAGATTCCATTGGAAACTTGTCATTCTTGAAAACTTTAGACCTCTCTTTTAATATGATGAACGACTCCATTCCACAAAGTTTGGGACAACTCTCTCAGCTAGTTTCCCTCGATCTGTCTTCTAATCCTTGGGAGGGCAATCTAACAGAAGCCCATTTCATAAATCTTACCCGGTTACAAGATTTTAGAGCAGGAGGCAGATACGACCACACGTCCCTCATTTTCGACATGGCGTATGATTGGGTTCCTCCATTCAAGCTCCACACAATTTATATCATAAATTGTCATATAGGTCCCGGTTTTGGGATATGGCTTCAATCTCAAACTGAACTGAGAGACATCAATCTTCGTGGTAATGGAATCTCGGATTCCTTGCCAAAGGACTGGCTGTTAAAGATATCTTCCCAACTCATCCAACTAGACTTGTCTTACAATCAATTTCGTGGAAACCTTCCATCCCATTTGAAATCTCCAAAATTGGAGTGGATTGATTTGAGTTATAATCAGTTGAAGGGCCCACTCCCACTTTGGTCGGCCACTAAGGTCACATACTTCGATCTTGAAAGAAATGCCTTTTCTGGGCCAATTCCCTCCAATATTGACCAGATGATGCCCAATTTGAATTCTTTGTATCTTTCTAAGAATCATTTGATTGGCAATATTCCTCACTCTATCTGTAACATGCAGCAATTGCGAGAATTGTCTCTTTCTGAGAATCATTTGAATGGCACTATTCCTCCCTTTGTTTACAACATGAAGCAGTTGCGAATCTTGTCTCTAAGGAGCAATCAATTTCACGGAGAATTTCATCATGCATGGAGTGTGGGGAGCATTATGAGGTATCTAGATGTTAGTCAAAACAATCTCTCGGGTAATATTCCCACATCATTGGGGGTATTAATTTCACTGGAAGTATTAAAGCTCAACAACAATTTTGACGGTGAAATTCCAAATTCCTTGCAAAATTGTTCTCAGTTGAGGAGTATTGATCTTGGTGACAACAAGTTATTTGGCAAAATACCACGGTGGATAGGAGGATTAAATGTATCCATGTTGAATATGATACGATTACGGTCCAACAAATTTAGTGGACATATATCCCAGCAACTGTGCAATCTTCAACAACTTCATATCCTCGACCTTAGTCACAACAACATTTCAGGTACTATTCCCAAATTTTTGGGTAATTTGGCTTCGCTGGTCAATGATTCACATGCATCATCTGATACTTTTTATGTCCCTGATGAGCAAACCACACTGACACTAAAAGGAAGGGAACTTGCGTACAATAATACTCTATATATTGTAAAGAGCATTGATCTTTCATCAAATACTTTACAATTTTACAAGGTGAAATCCCTGAAGAAATAA

Protein Analysis

1055

Amino Acids

119.99

Weight (kDa)

8.97

Isoelectric Point (pI)

41.97

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready

Orthologous Genes (Group: OG0000048)

Species Orthologous Gene IDs
arabidopsis_thaliana AT2G34930
fragaria_vesca FvH4_3g12670 FvH4_3g12672 FvH4_3g12740 FvH4_3g12742 FvH4_3g12770 FvH4_3g12770 FvH4_3g12860 FvH4_3g12890 FvH4_3g13431 FvH4_3g13433 FvH4_3g13435 FvH4_3g13470 FvH4_3g13470 FvH4_3g13480 FvH4_3g13562 FvH4_3g13580 FvH4_3g13600 FvH4_3g13600 FvH4_3g13600 FvH4_3g13600 FvH4_3g13600 FvH4_3g13600 FvH4_3g13610 FvH4_3g13620 FvH4_3g13620 FvH4_3g23240 FvH4_3g32910 FvH4_3g35070 FvH4_3g45520 FvH4_5g08430 FvH4_5g08450 FvH4_6g53230 FvH4_6g53300
malus_domestica MD05G1217600.v1.1 MD05G1217700.v1.1 MD05G1224700.v1.1 MD05G1225100.v1.1 MD05G1225300.v1.1 MD05G1225400.v1.1 MD05G1235900.v1.1 MD05G1236100.v1.1 MD05G1236300.v1.1 MD05G1237200.v1.1 MD05G1241600.v1.1 MD05G1245700.v1.1 MD05G1245800.v1.1 MD05G1245900.v1.1 MD05G1246000.v1.1 MD05G1246100.v1.1 MD05G1246300.v1.1 MD05G1246400.v1.1 MD05G1246500.v1.1 MD05G1248100.v1.1 MD05G1248200.v1.1 MD05G1264300.v1.1 MD05G1275900.v1.1 MD07G1051400.v1.1 MD09G1012600.v1.1 MD09G1012700.v1.1 MD09G1012800.v1.1 MD10G1221400.v1.1 MD10G1221500.v1.1 MD10G1221600.v1.1 MD10G1221900.v1.1 MD10G1222200.v1.1 MD10G1222400.v1.1 MD10G1222500.v1.1 MD10G1222900.v1.1 MD10G1223000.v1.1 MD10G1223100.v1.1 MD10G1223500.v1.1 MD10G1228000.v1.1 MD12G1019600.v1.1 MD12G1020000.v1.1 MD12G1020100.v1.1 MD17G1013200.v1.1 MD17G1013300.v1.1 MD17G1013400.v1.1
prunus_persica Prupe.1G060500_v2.0.a1 Prupe.1G100100_v2.0.a1 Prupe.3G124000_v2.0.a1 Prupe.3G304400_v2.0.a1 Prupe.4G116800_v2.0.a1 Prupe.4G116900_v2.0.a1 Prupe.4G117000_v2.0.a1 Prupe.4G121800_v2.0.a1 Prupe.4G121900_v2.0.a1 Prupe.4G122000_v2.0.a1 Prupe.4G122100_v2.0.a1 Prupe.4G122200_v2.0.a1 Prupe.4G122300_v2.0.a1 Prupe.4G122500_v2.0.a1 Prupe.4G122600_v2.0.a1 Prupe.4G122800_v2.0.a1 Prupe.4G122900_v2.0.a1 Prupe.4G123000_v2.0.a1 Prupe.4G123100_v2.0.a1 Prupe.4G123200_v2.0.a1 Prupe.4G131500_v2.0.a1 Prupe.4G131600_v2.0.a1 Prupe.7G032500_v2.0.a1 Prupe.7G032900_v2.0.a1 Prupe.7G033000_v2.0.a1 Prupe.7G033100_v2.0.a1 Prupe.7G033300_v2.0.a1 Prupe.7G033600_v2.0.a1 Prupe.7G034600_v2.0.a1 Prupe.7G040200_v2.0.a1 Prupe.7G059200_v2.0.a1
pyrus_communis pycom05g20580 pycom05g20590 pycom05g20760 pycom05g20800 pycom05g21280 pycom05g21290 pycom05g21820 pycom05g21830 pycom05g22180 pycom05g22190 pycom05g22210 pycom05g22450 pycom05g22460 pycom05g22470 pycom05g22480 pycom05g22490 pycom05g23770 pycom05g23780 pycom05g24050 pycom05g24060 pycom07g03910 pycom10g18700 pycom10g18720 pycom10g18730 pycom10g18740 pycom10g19150 pycom111g01060 pycom12g01660 pycom12g01690 pycom12g01720 pycom12g01740 pycom12g01750 pycom12g01770 pycom12g01810 pycom12g01820 pycom12g01830 pycom12g01840 pycom12g01870 pycom12g01900 pycom17g01060 pycom17g01070
rosa_chinensis RchiOBHm_Chr1g0315041 RchiOBHm_Chr1g0315051 RchiOBHm_Chr1g0315071 RchiOBHm_Chr1g0315161 RchiOBHm_Chr1g0315211 RchiOBHm_Chr1g0315251 RchiOBHm_Chr1g0315321 RchiOBHm_Chr1g0315391 RchiOBHm_Chr1g0315451 RchiOBHm_Chr1g0315481 RchiOBHm_Chr1g0315551 RchiOBHm_Chr1g0315601 RchiOBHm_Chr1g0315621 RchiOBHm_Chr1g0359221 RchiOBHm_Chr2g0142981 RchiOBHm_Chr2g0143001 RchiOBHm_Chr2g0143061 RchiOBHm_Chr2g0143091 RchiOBHm_Chr2g0175321 RchiOBHm_Chr2g0175341 RchiOBHm_Chr2g0175361 RchiOBHm_Chr2g0175371 RchiOBHm_Chr3g0470491 RchiOBHm_Chr3g0480881 RchiOBHm_Chr3g0485511 RchiOBHm_Chr5g0020741 RchiOBHm_Chr5g0020901 RchiOBHm_Chr5g0020931 RchiOBHm_Chr5g0020941 RchiOBHm_Chr5g0020961 RchiOBHm_Chr5g0020971 RchiOBHm_Chr5g0021451 RchiOBHm_Chr5g0021531 RchiOBHm_Chr5g0021831 RchiOBHm_Chr5g0021841 RchiOBHm_Chr5g0021931 RchiOBHm_Chr5g0021941 RchiOBHm_Chr5g0021981 RchiOBHm_Chr5g0021991 RchiOBHm_Chr5g0022011 RchiOBHm_Chr5g0022181 RchiOBHm_Chr5g0022191 RchiOBHm_Chr5g0022211 RchiOBHm_Chr5g0022221 RchiOBHm_Chr5g0022231 RchiOBHm_Chr5g0022291 RchiOBHm_Chr5g0022301 RchiOBHm_Chr5g0022331 RchiOBHm_Chr5g0022361 RchiOBHm_Chr5g0022371 RchiOBHm_Chr5g0022381 RchiOBHm_Chr5g0022401 RchiOBHm_Chr5g0022431 RchiOBHm_Chr5g0022451 RchiOBHm_Chr5g0022541 RchiOBHm_Chr5g0022591 RchiOBHm_Chr5g0022601 RchiOBHm_Chr5g0022701 RchiOBHm_Chr5g0022741 RchiOBHm_Chr5g0022791 RchiOBHm_Chr5g0022811 RchiOBHm_Chr5g0022851 RchiOBHm_Chr5g0029441 RchiOBHm_Chr5g0041631 RchiOBHm_Chr5g0069391 RchiOBHm_Chr6g0273811 RchiOBHm_Chr6g0273831 RchiOBHm_Chr6g0275331 RchiOBHm_Chr7g0219061
rosa_laevigata RLG00000002463 RLG00000020007 RLG00000020008 RLG00000022320 RLG00000022321 RLG00000023446 RLG00000030742 RLG00000030743 RLG00000030747 RLG00000032557 RLG00000032564 RLG00000032571 RLG00000032573 RLG00000032574 RLG00000032612 RLG00000032633 RLG00000032636 RLG00000032638 RLG00000032650 RLG00000032651 RLG00000032652 RLG00000032653 RLG00000032655 RLG00000032673 RLG00000032678 RLG00000032769 RLG00000032857 RLG00000033168 RLG00000033465 RLG00000034086 RLG00000034222 RLG00000035290
rosa_multiflora Rmu_co8143358.1_g000001 Rmu_co8518791.1_g000001 Rmu_sc0000178.1_g000008 Rmu_sc0000178.1_g000014 Rmu_sc0000401.1_g000005 Rmu_sc0000401.1_g000013 Rmu_sc0000401.1_g000017 Rmu_sc0000401.1_g000018 Rmu_sc0000401.1_g000024 Rmu_sc0000401.1_g000025 Rmu_sc0000576.1_g000020 Rmu_sc0001585.1_g000003 Rmu_sc0001585.1_g000005 Rmu_sc0001585.1_g000008 Rmu_sc0001784.1_g000006 Rmu_sc0001784.1_g000011 Rmu_sc0001784.1_g000022 Rmu_sc0001784.1_g000028 Rmu_sc0002052.1_g000004 Rmu_sc0002052.1_g000011 Rmu_sc0002277.1_g000003 Rmu_sc0002277.1_g000006 Rmu_sc0002277.1_g000024 Rmu_sc0002658.1_g000012 Rmu_sc0003512.1_g000004 Rmu_sc0003512.1_g000007 Rmu_sc0004180.1_g000016 Rmu_sc0004180.1_g000029 Rmu_sc0004180.1_g000034 Rmu_sc0005639.1_g000008 Rmu_sc0005639.1_g000023 Rmu_sc0006070.1_g000016 Rmu_sc0006070.1_g000017 Rmu_sc0006966.1_g000021 Rmu_sc0006966.1_g000023 Rmu_sc0007239.1_g000003 Rmu_sc0008460.1_g000010 Rmu_sc0009984.1_g000008 Rmu_sc0010181.1_g000005 Rmu_sc0010181.1_g000010 Rmu_sc0010503.1_g000006 Rmu_sc0011646.1_g000003 Rmu_sc0012984.1_g000011 Rmu_sc0016972.1_g000005 Rmu_sc0016972.1_g000008 Rmu_sc0023070.1_g000003 Rmu_sc0025660.1_g000001 Rmu_ssc0000322.1_g000019
rosa_roxburghii Rroxscaffold_1G00038860 Rroxscaffold_1G00053490 Rroxscaffold_1G00053500 Rroxscaffold_1G00054230 Rroxscaffold_1G00056460 Rroxscaffold_1G00056470 Rroxscaffold_1G00056480 Rroxscaffold_1G00056500 Rroxscaffold_1G00056510 Rroxscaffold_1G00056620 Rroxscaffold_1G00056690 Rroxscaffold_1G00056710 Rroxscaffold_1G00056720 Rroxscaffold_1G00056730 Rroxscaffold_1G00056740 Rroxscaffold_1G00056750 Rroxscaffold_1G00056760 Rroxscaffold_1G00056870 Rroxscaffold_1G00056900 Rroxscaffold_1G00057120 Rroxscaffold_1G00057560 Rroxscaffold_2G00077430 Rroxscaffold_2G00102160 Rroxscaffold_3G00231420 Rroxscaffold_3G00231430 Rroxscaffold_4G00297230 Rroxscaffold_4G00331570 Rroxscaffold_6G00396700 Rroxscaffold_6G00400940 Rroxscaffold_7G00192740
rosa_rugosa Rorug01G0004400 Rorug01G0004500 Rorug02G0377600 Rorug02G0378000 Rorug02G0582800 Rorug02G0583400 Rorug03G0187000 Rorug03G0218800 Rorug04G0081200 Rorug05G0062700 Rorug05G0062700 Rorug05G0063100 Rorug05G0063200 Rorug05G0063200 Rorug05G0063200 Rorug05G0067000 Rorug05G0069700 Rorug05G0069900 Rorug05G0070000 Rorug05G0070100 Rorug05G0070300 Rorug05G0070400 Rorug05G0070600 Rorug05G0070600 Rorug05G0072300 Rorug05G0072400 Rorug05G0072500 Rorug05G0072500 Rorug05G0072600.1 Rorug05G0072700 Rorug05G0072800 Rorug05G0072800 Rorug05G0072900 Rorug05G0073000 Rorug05G0073000 Rorug05G0073400 Rorug05G0073400 Rorug05G0073400 Rorug05G0074800 Rorug05G0075000 Rorug05G0114300 Rorug05G0194200 Rorug06G0097800
rosa_samantha Rh2AG401400 Rh2CG387600 Rh2CG417000 Rh2CG637400 Rh5CG169600 Rh5CG172100 Rh5CG175200 Rh5CG317100 Rh6DG187900
rosa_wichuraiana Rw1G000750 Rw1G000790 Rw1G000820 Rw1G000860 Rw1G000880 Rw1G000910 Rw2G035180 Rw2G035200 Rw2G035240 Rw2G054370 Rw2G054380 Rw5G013570 Rw5G013580 Rw5G013590 Rw5G013910 Rw5G013980 Rw5G014110 Rw5G014120 Rw5G014280 Rw5G014310 Rw5G014400 Rw5G014420 Rw5G014440 Rw5G014460 Rw5G014480 Rw5G014500 Rw5G014520 Rw5G014530 Rw5G042390

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 1 cut(s) 2295
AccB7I CCANNNNNTGG 1 cut(s) 663
AccII CGCG 1 cut(s) 276
AccIII TCCGGA 1 cut(s) 978
AciI CCGC 4 cut(s) 274, 276, 325, 757
AclI AACGTT 1 cut(s) 645
AclWI GGATC 2 cut(s) 1308, 1478
AcoI YGGCCR 2 cut(s) 786, 2328
AcyI GRCGYC 1 cut(s) 743
AfaI GTAC 6 cut(s) 104, 504, 587, 763, 2959, 3080
AfeI AGCGCT 1 cut(s) 849
AflII CTTAAG 1 cut(s) 1600
AflIII ACRYGT 1 cut(s) 2004
AgeI ACCGGT 1 cut(s) 953
AhdI GACNNNNNGTC 1 cut(s) 2005
AjiI CACGTC 1 cut(s) 2007
AjnI CCWGG 1 cut(s) 1059
AjuI GAANNNNNNNTTGG 2 cut(s) 1234, 1266
Alw26I GTCTC 7 cut(s) 200, 275, 1263, 1732, 2124, 2502, 2574
AlwI GGATC 2 cut(s) 1308, 1478
AlwNI CAGNNNCTG 2 cut(s) 246, 2902
Ama87I CYCGRG 1 cut(s) 2662
Aor13HI TCCGGA 1 cut(s) 978
Aor51HI AGCGCT 1 cut(s) 849
AoxI GGCC 4 cut(s) 786, 2308, 2328, 2375
ApaI GGGCCC 1 cut(s) 2312
ApeKI GCWGC 1 cut(s) 2479
AseI ATTAAT 1 cut(s) 2693
AsiGI ACCGGT 1 cut(s) 953
Asp700I GAANNNNTTC 1 cut(s) 1475
AspLEI GCGC 1 cut(s) 850
AsuC2I CCSGG 2 cut(s) 1966, 2091
AsuHPI GGTGA 8 cut(s) 646, 695, 806, 943, 1493, 2747, 2801, 3157
AsuII TTCGAA 1 cut(s) 530
AsuNHI GCTAGC 1 cut(s) 328
AvaI CYCGRG 1 cut(s) 2662
AvaII GGWCC 7 cut(s) 362, 517, 574, 973, 1063, 2087, 2868
AxyI CCTNAGG 1 cut(s) 1732
BaeGI GKGCMC 2 cut(s) 912, 2312
BalI TGGCCA 1 cut(s) 788
BanII GRGCYC 2 cut(s) 1790, 2312
BarI GAAGNNNNNNTAC 2 cut(s) 2971, 3003
BauI CACGAG 1 cut(s) 410
BbsI GAAGAC 3 cut(s) 259, 738, 1905
BbvI GCAGC 1 cut(s) 2491
BccI CCATC 7 cut(s) 40, 347, 659, 918, 964, 1287, 2257
BciT130I CCWGG 1 cut(s) 1061
BciVI GTATCC 1 cut(s) 2851
BclI TGATCA 1 cut(s) 877
BcnI CCSGG 2 cut(s) 1966, 2091
BcoDI GTCTC 7 cut(s) 200, 275, 1263, 1732, 2124, 2502, 2574
BfaI CTAG 6 cut(s) 329, 506, 1688, 1895, 2213, 2639
BfmI CTRYAG 1 cut(s) 1406
BfoI RGCGCY 1 cut(s) 851
BfrI CTTAAG 1 cut(s) 1600
BfuI GTATCC 1 cut(s) 2851
BglII AGATCT 1 cut(s) 404
BisI GCNGC 3 cut(s) 277, 326, 2480
BlsI GCNGC 3 cut(s) 278, 327, 2481
BmcAI AGTACT 2 cut(s) 504, 763
Bme1390I CCNGG 3 cut(s) 1061, 1966, 2091
Bme18I GGWCC 7 cut(s) 362, 517, 574, 973, 1063, 2087, 2868
BmeRI GACNNNNNGTC 1 cut(s) 2005
BmeT110I CYCGRG 1 cut(s) 2662
BmgBI CACGTC 1 cut(s) 2007
BmiI GGNNCC 4 cut(s) 576, 2040, 2089, 2310
BmrFI CCNGG 3 cut(s) 1061, 1966, 2091
BmsI GCATC 3 cut(s) 837, 2394, 3020
BmtI GCTAGC 1 cut(s) 332
BoxI GACNNNNGTC 1 cut(s) 2937
BpiI GAAGAC 3 cut(s) 259, 738, 1905
BplI GAGNNNNNCTC 4 cut(s) 751, 783, 837, 869
BpmI CTGGAG 2 cut(s) 55, 268
Bpu10I CCTNAGC 1 cut(s) 1067
Bpu14I TTCGAA 1 cut(s) 530
BpuMI CCSGG 2 cut(s) 1966, 2091
Bsa29I ATCGAT 1 cut(s) 985
BsaBI GATNNNNATC 1 cut(s) 1083
BsaHI GRCGYC 1 cut(s) 743
BsaI GGTCTC 1 cut(s) 1732
BsaJI CCNNGG 5 cut(s) 274, 1213, 1288, 1922, 2816
BsaWI WCCGGW 2 cut(s) 953, 978
BsaXI ACNNNNNCTCC 2 cut(s) 2515, 2545
Bse118I RCCGGY 2 cut(s) 953, 1723
Bse1I ACTGG 4 cut(s) 38, 789, 2183, 2706
Bse21I CCTNAGG 1 cut(s) 1732
Bse3DI GCAATG 1 cut(s) 423
Bse8I GATNNNNATC 1 cut(s) 1083
BseAI TCCGGA 1 cut(s) 978
BseBI CCWGG 1 cut(s) 1061
BseCI ATCGAT 1 cut(s) 985
BseDI CCNNGG 5 cut(s) 274, 1213, 1288, 1922, 2816
BseGI GGATG 3 cut(s) 1298, 2205, 2249
BseJI GATNNNNATC 1 cut(s) 1083
BseMI GCAATG 1 cut(s) 423
BseMII CTCAG 6 cut(s) 721, 1700, 1904, 2117, 2496, 2780
BseNI ACTGG 4 cut(s) 38, 789, 2183, 2706
BseRI GAGGAG 3 cut(s) 1135, 1176, 2788
BseSI GKGCMC 2 cut(s) 912, 2312
BseXI GCAGC 1 cut(s) 2491
BseYI CCCAGC 2 cut(s) 577, 2895
Bsh1236I CGCG 1 cut(s) 276
BshFI GGCC 4 cut(s) 788, 2310, 2330, 2377
BshTI ACCGGT 1 cut(s) 953
BshVI ATCGAT 1 cut(s) 985
BsiHKCI CYCGRG 1 cut(s) 2662
BsiSI CCGG 5 cut(s) 954, 979, 1724, 1966, 2091
BslFI GGGAC 4 cut(s) 1893, 1993, 2073, 3017
BsmAI GTCTC 7 cut(s) 200, 275, 1263, 1732, 2124, 2502, 2574
BsmFI GGGAC 4 cut(s) 1893, 1993, 2073, 3017
BsmI GAATGC 1 cut(s) 1089
BsnI GGCC 4 cut(s) 788, 2310, 2330, 2377
Bso31I GGTCTC 1 cut(s) 1732
BsoBI CYCGRG 1 cut(s) 2662
Bsp119I TTCGAA 1 cut(s) 530
Bsp120I GGGCCC 1 cut(s) 2308
Bsp1286I GDGCHC 3 cut(s) 912, 1790, 2312
Bsp13I TCCGGA 1 cut(s) 978
Bsp1407I TGTACA 1 cut(s) 585
Bsp143I GATC 9 cut(s) 404, 877, 1300, 1459, 1483, 1906, 2350, 2782, 3112
BspACI CCGC 4 cut(s) 274, 276, 325, 757
BspANI GGCC 4 cut(s) 788, 2310, 2330, 2377
BspCNI CTCAG 6 cut(s) 720, 1701, 1903, 2118, 2497, 2779
BspDI ATCGAT 1 cut(s) 985
BspEI TCCGGA 1 cut(s) 978
BspFNI CGCG 1 cut(s) 276
BspLI GGNNCC 4 cut(s) 576, 2040, 2089, 2310
BspMAI CTGCAG 1 cut(s) 1410
BspOI GCTAGC 1 cut(s) 332
BspPI GGATC 2 cut(s) 1308, 1478
BspT104I TTCGAA 1 cut(s) 530
BspTI CTTAAG 1 cut(s) 1600
BspTNI GGTCTC 1 cut(s) 1732
BsrDI GCAATG 1 cut(s) 423
BsrFI RCCGGY 2 cut(s) 953, 1723
BsrGI TGTACA 1 cut(s) 585
BsrI ACTGG 4 cut(s) 38, 789, 2183, 2706
BssAI RCCGGY 2 cut(s) 953, 1723
BssECI CCNNGG 5 cut(s) 274, 1213, 1288, 1922, 2816
BssMI GATC 9 cut(s) 404, 877, 1300, 1459, 1483, 1906, 2350, 2782, 3112
BssNI GRCGYC 1 cut(s) 743
BssSI CACGAG 1 cut(s) 410
BssT1I CCWWGG 2 cut(s) 1213, 1922
Bst2BI CACGAG 1 cut(s) 410
Bst2UI CCWGG 1 cut(s) 1061
Bst4CI ACNGT 5 cut(s) 166, 2735, 2820, 2868, 2904
Bst6I CTCTTC 2 cut(s) 1273, 1632
BstACI GRCGYC 1 cut(s) 743
BstAFI CTTAAG 1 cut(s) 1600
BstAPI GCANNNNNTGC 1 cut(s) 2485
BstAUI TGTACA 1 cut(s) 585
BstBI TTCGAA 1 cut(s) 530
BstC8I GCNNGC 5 cut(s) 330, 348, 846, 890, 1589
BstDSI CCRYGG 2 cut(s) 274, 2816
BstEII GGTNACC 1 cut(s) 1184
BstF5I GGATG 3 cut(s) 1298, 2205, 2249
BstFNI CGCG 1 cut(s) 276
BstH2I RGCGCY 1 cut(s) 851
BstHHI GCGC 1 cut(s) 850
BstKTI GATC 9 cut(s) 407, 880, 1303, 1462, 1486, 1909, 2353, 2785, 3115
BstMAI GTCTC 7 cut(s) 200, 275, 1263, 1732, 2124, 2502, 2574
BstMBI GATC 9 cut(s) 404, 877, 1300, 1459, 1483, 1906, 2350, 2782, 3112
BstMWI GCNNNNNNNGC 1 cut(s) 2485
BstNI CCWGG 1 cut(s) 1061
BstNSI RCATGY 4 cut(s) 350, 757, 2479, 3011
BstPAI GACNNNNGTC 1 cut(s) 2937
BstPI GGTNACC 1 cut(s) 1184
BstSCI CCNGG 3 cut(s) 1059, 1964, 2089
BstSFI CTRYAG 1 cut(s) 1406
BstSLI GKGCMC 2 cut(s) 912, 2312
BstUI CGCG 1 cut(s) 276
BstV1I GCAGC 1 cut(s) 2491
BstV2I GAAGAC 3 cut(s) 259, 738, 1905
BstX2I RGATCY 2 cut(s) 404, 1300
BstXI CCANNNNNNTGG 3 cut(s) 2178, 2683, 2974
BstYI RGATCY 2 cut(s) 404, 1300
Bsu15I ATCGAT 1 cut(s) 985
Bsu36I CCTNAGG 1 cut(s) 1732
BsuI GTATCC 1 cut(s) 2851
BsuRI GGCC 4 cut(s) 788, 2310, 2330, 2377
BsuTUI ATCGAT 1 cut(s) 985
BtgI CCRYGG 2 cut(s) 274, 2816
BtgZI GCGATG 1 cut(s) 1070
BtrI CACGTC 1 cut(s) 2007
BtsCI GGATG 3 cut(s) 1298, 2205, 2249
BtsI GCAGTG 2 cut(s) 814, 1403
BtsIMutI CAGTG 6 cut(s) 162, 796, 814, 1403, 2699, 3050
Cac8I GCNNGC 5 cut(s) 330, 348, 846, 890, 1589
CaiI CAGNNNCTG 2 cut(s) 246, 2902
CfoI GCGC 1 cut(s) 850
Cfr10I RCCGGY 2 cut(s) 953, 1723
Cfr42I CCGCGG 1 cut(s) 277
ClaI ATCGAT 1 cut(s) 985
CseI GACGC 3 cut(s) 252, 732, 1140
Csp6I GTAC 6 cut(s) 103, 503, 586, 762, 2958, 3079
CspAI ACCGGT 1 cut(s) 953
CviQI GTAC 6 cut(s) 103, 503, 586, 762, 2958, 3079
DpnI GATC 9 cut(s) 406, 879, 1302, 1461, 1485, 1908, 2352, 2784, 3114
DpnII GATC 9 cut(s) 404, 877, 1300, 1459, 1483, 1906, 2350, 2782, 3112
DraI TTTAAA 3 cut(s) 862, 1053, 1744
DriI GACNNNNNGTC 1 cut(s) 2005
EaeI YGGCCR 2 cut(s) 786, 2328
Eam1104I CTCTTC 2 cut(s) 1273, 1632
Eam1105I GACNNNNNGTC 1 cut(s) 2005
EarI CTCTTC 2 cut(s) 1273, 1632
Eco130I CCWWGG 2 cut(s) 1213, 1922
Eco24I GRGCYC 2 cut(s) 1790, 2312
Eco31I GGTCTC 1 cut(s) 1732
Eco32I GATATC 1 cut(s) 2193
Eco47I GGWCC 7 cut(s) 362, 517, 574, 973, 1063, 2087, 2868
Eco47III AGCGCT 1 cut(s) 849
Eco81I CCTNAGG 1 cut(s) 1732
Eco88I CYCGRG 1 cut(s) 2662
Eco91I GGTNACC 1 cut(s) 1184
EcoO109I RGGNCCY 3 cut(s) 574, 2087, 2308
EcoO65I GGTNACC 1 cut(s) 1184
EcoRI GAATTC 2 cut(s) 382, 2416
EcoRII CCWGG 1 cut(s) 1059
EcoRV GATATC 1 cut(s) 2193
EcoT14I CCWWGG 2 cut(s) 1213, 1922
EcoT22I ATGCAT 3 cut(s) 348, 2611, 3013
EcoT38I GRGCYC 2 cut(s) 1790, 2312
ErhI CCWWGG 2 cut(s) 1213, 1922
FalI AAGNNNNNCTT 2 cut(s) 1594, 1626
FaqI GGGAC 4 cut(s) 1893, 1993, 2073, 3017
FauNDI CATATG 1 cut(s) 281
FbaI TGATCA 1 cut(s) 877
Fnu4HI GCNGC 3 cut(s) 277, 326, 2480
FokI GGATG 3 cut(s) 1305, 2192, 2236
FriOI GRGCYC 2 cut(s) 1790, 2312
Fsp4HI GCNGC 3 cut(s) 277, 326, 2480
FspBI CTAG 6 cut(s) 329, 506, 1688, 1895, 2213, 2639
GlaI GCGC 1 cut(s) 849
GluI GCNGC 3 cut(s) 277, 326, 2480
GsaI CCCAGC 2 cut(s) 581, 2899
GsuI CTGGAG 2 cut(s) 55, 268
HaeII RGCGCY 1 cut(s) 851
HaeIII GGCC 4 cut(s) 788, 2310, 2330, 2377
HapII CCGG 5 cut(s) 954, 979, 1724, 1966, 2091
HgaI GACGC 3 cut(s) 252, 732, 1140
HhaI GCGC 1 cut(s) 850
Hin1I GRCGYC 1 cut(s) 743
Hin6I GCGC 1 cut(s) 848
HinP1I GCGC 1 cut(s) 848
HindIII AAGCTT 1 cut(s) 1069
HpaII CCGG 5 cut(s) 954, 979, 1724, 1966, 2091
HphI GGTGA 8 cut(s) 646, 695, 806, 943, 1493, 2747, 2801, 3157
Hpy166II GTNNAC 8 cut(s) 218, 517, 586, 588, 623, 797, 2542, 2885
Hpy188I TCNGA 8 cut(s) 187, 388, 1292, 1375, 1440, 2161, 2506, 3019
Hpy8I GTNNAC 8 cut(s) 218, 517, 586, 588, 623, 797, 2542, 2885
HpyAV CCTTC 8 cut(s) 737, 923, 1185, 1359, 1498, 2255, 2299, 3060
HpyCH4III ACNGT 5 cut(s) 166, 2735, 2820, 2868, 2904
HpyCH4IV ACGT 2 cut(s) 645, 2006
HpyF10VI GCNNNNNNNGC 1 cut(s) 2485
HpySE526I ACGT 2 cut(s) 645, 2006
Hsp92I GRCGYC 1 cut(s) 743
HspAI GCGC 1 cut(s) 848
Kpn2I TCCGGA 1 cut(s) 978
Ksp22I TGATCA 1 cut(s) 877
KspI CCGCGG 1 cut(s) 277
Kzo9I GATC 9 cut(s) 404, 877, 1300, 1459, 1483, 1906, 2350, 2782, 3112
LmnI GCTCC 4 cut(s) 1114, 2058, 2577, 2622
Lsp1109I GCAGC 1 cut(s) 2491
LweI GCATC 3 cut(s) 837, 2394, 3020
MaeI CTAG 6 cut(s) 329, 506, 1688, 1895, 2213, 2639
MaeII ACGT 2 cut(s) 645, 2006
MaeIII GTNAC 9 cut(s) 646, 1184, 1362, 1683, 1968, 2338, 2471, 2789, 2939
MalI GATC 9 cut(s) 406, 879, 1302, 1461, 1485, 1908, 2352, 2784, 3114
MboI GATC 9 cut(s) 404, 877, 1300, 1459, 1483, 1906, 2350, 2782, 3112
MfeI CAATTG 3 cut(s) 1007, 1321, 2483
MflI RGATCY 2 cut(s) 404, 1300
MhlI GDGCHC 3 cut(s) 912, 1790, 2312
MlsI TGGCCA 1 cut(s) 788
MluNI TGGCCA 1 cut(s) 788
MlyI GAGTC 4 cut(s) 249, 1326, 1691, 1853
MmeI TCCRAC 2 cut(s) 2233, 2895
Mox20I TGGCCA 1 cut(s) 788
Mph1103I ATGCAT 3 cut(s) 348, 2611, 3013
MroI TCCGGA 1 cut(s) 978
MroXI GAANNNNTTC 1 cut(s) 1475
MscI TGGCCA 1 cut(s) 788
MslI CAYNNNNRTG 2 cut(s) 1479, 2517
Msp20I TGGCCA 1 cut(s) 788
MspA1I CMGCKG 2 cut(s) 276, 581
MspCI CTTAAG 1 cut(s) 1600
MspI CCGG 5 cut(s) 954, 979, 1724, 1966, 2091
MspR9I CCNGG 3 cut(s) 1061, 1966, 2091
MunI CAATTG 3 cut(s) 1007, 1321, 2483
Mva1269I GAATGC 1 cut(s) 1089
MvaI CCWGG 1 cut(s) 1061
MvnI CGCG 1 cut(s) 276
MwoI GCNNNNNNNGC 1 cut(s) 2485
NciI CCSGG 2 cut(s) 1966, 2091
NdeI CATATG 1 cut(s) 281
NdeII GATC 9 cut(s) 404, 877, 1300, 1459, 1483, 1906, 2350, 2782, 3112
NheI GCTAGC 1 cut(s) 328
NlaIV GGNNCC 4 cut(s) 576, 2040, 2089, 2310
NmuCI GTSAC 4 cut(s) 1683, 2338, 2789, 2939
NsiI ATGCAT 3 cut(s) 348, 2611, 3013
NspI RCATGY 4 cut(s) 350, 757, 2479, 3011
NspV TTCGAA 1 cut(s) 530
PaeI GCATGC 1 cut(s) 350
PcsI WCGNNNNNNNCGW 1 cut(s) 642
PctI GAATGC 1 cut(s) 1089
PdmI GAANNNNTTC 1 cut(s) 1475
PflMI CCANNNNNTGG 1 cut(s) 663
PinAI ACCGGT 1 cut(s) 953
PkrI GCNGC 3 cut(s) 278, 327, 2481
PleI GAGTC 4 cut(s) 249, 1325, 1690, 1853
PpsI GAGTC 4 cut(s) 249, 1325, 1690, 1853
PpuMI RGGWCCY 2 cut(s) 574, 2087
PshAI GACNNNNGTC 1 cut(s) 2937
PshBI ATTAAT 1 cut(s) 2693
PsiI TTATAA 1 cut(s) 2295
Psp1406I AACGTT 1 cut(s) 645
Psp5II RGGWCCY 2 cut(s) 574, 2087
Psp6I CCWGG 1 cut(s) 1059
PspEI GGTNACC 1 cut(s) 1184
PspFI CCCAGC 2 cut(s) 577, 2895
PspGI CCWGG 1 cut(s) 1059
PspN4I GGNNCC 4 cut(s) 576, 2040, 2089, 2310
PspOMI GGGCCC 1 cut(s) 2308
PspPPI RGGWCCY 2 cut(s) 574, 2087
PstI CTGCAG 1 cut(s) 1410
PstNI CAGNNNCTG 2 cut(s) 246, 2902
PsuI RGATCY 2 cut(s) 404, 1300
PvuII CAGCTG 1 cut(s) 581
RsaI GTAC 6 cut(s) 104, 504, 587, 763, 2959, 3080
RsaNI GTAC 6 cut(s) 103, 503, 586, 762, 2958, 3079
RseI CAYNNNNRTG 2 cut(s) 1479, 2517
SacII CCGCGG 1 cut(s) 277
SatI GCNGC 3 cut(s) 277, 326, 2480
Sau3AI GATC 9 cut(s) 404, 877, 1300, 1459, 1483, 1906, 2350, 2782, 3112
ScaI AGTACT 2 cut(s) 504, 763
SchI GAGTC 4 cut(s) 249, 1326, 1691, 1853
ScrFI CCNGG 3 cut(s) 1061, 1966, 2091
SduI GDGCHC 3 cut(s) 912, 1790, 2312
SfaNI GCATC 3 cut(s) 837, 2394, 3020
SfcI CTRYAG 1 cut(s) 1406
Sfr303I CCGCGG 1 cut(s) 277
SfuI TTCGAA 1 cut(s) 530
SgrBI CCGCGG 1 cut(s) 277
SinI GGWCC 7 cut(s) 362, 517, 574, 973, 1063, 2087, 2868
SmiI ATTTAAAT 1 cut(s) 1053
SmiMI CAYNNNNRTG 2 cut(s) 1479, 2517
SmlI CTYRAG 1 cut(s) 1600
SmoI CTYRAG 1 cut(s) 1600
SphI GCATGC 1 cut(s) 350
SsiI CCGC 4 cut(s) 274, 276, 325, 757
SspI AATATT 5 cut(s) 26, 155, 2392, 2455, 2671
SspMI CTAG 6 cut(s) 329, 506, 1688, 1895, 2213, 2639
StyD4I CCNGG 3 cut(s) 1059, 1964, 2089
StyI CCWWGG 2 cut(s) 1213, 1922
SwaI ATTTAAAT 1 cut(s) 1053
TaaI ACNGT 5 cut(s) 166, 2735, 2820, 2868, 2904
TaiI ACGT 2 cut(s) 648, 2009
TaqI TCGA 7 cut(s) 530, 922, 985, 1905, 2019, 2349, 2931
TatI WGTACW 3 cut(s) 502, 585, 761
TauI GCSGC 2 cut(s) 279, 328
TscAI CASTG 6 cut(s) 169, 796, 814, 1410, 2706, 3057
TseFI GTSAC 4 cut(s) 1683, 2338, 2789, 2939
TseI GCWGC 1 cut(s) 2479
Tsp45I GTSAC 4 cut(s) 1683, 2338, 2789, 2939
TspGWI ACGGA 2 cut(s) 546, 2607
TspRI CASTG 6 cut(s) 169, 796, 814, 1410, 2706, 3057
Van91I CCANNNNNTGG 1 cut(s) 663
Vha464I CTTAAG 1 cut(s) 1600
VpaK11BI GGWCC 7 cut(s) 362, 517, 574, 973, 1063, 2087, 2868
VspI ATTAAT 1 cut(s) 2693
XbaI TCTAGA 1 cut(s) 2638
XceI RCATGY 4 cut(s) 350, 757, 2479, 3011
XcmI CCANNNNNNNNNTGG 2 cut(s) 2274, 2319
XmnI GAANNNNTTC 1 cut(s) 1475
XspI CTAG 6 cut(s) 329, 506, 1688, 1895, 2213, 2639
ZrmI AGTACT 2 cut(s) 504, 763
Zsp2I ATGCAT 3 cut(s) 348, 2611, 3013
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.