Basic Information

Type: gene

Biological Identity

Species

malus_domestica

Chromosome

Chr10

Orthogroup ID

OG0000048

Physical Location & Seq

Genomic Coordinates Reverse (-)

32152387 .. 32155197

Gene Structure 2811 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

MD10G1223500.v1.1.491

Sequence Viewer

CDS Protein Promoter (2k)

Length: 2811 bp

ATGGGCGGAGGACTTGGAATTTTCGACCCCATCGATTTCCTAACAAGCTTCAGCTTCTTATATATTGACTTGTATCCTCACCTCAGTAGCCAGCCATCTGCAACAAAAAAGAAAAACTTGGTAAAAATGGGTAGGTTCCATGCTTGCTTATTCAACCCTACTTTTCACCTCAACATTTTGCTCTTTCTGGTTTTGGCCTCTTCATATCTTTCAGTCACTGCGAAATCATGCATCGAGGAAGAGAGAGGAGCACTTCTCAGCTTTAAACAACACCTCACCGATCAGTCCCGTCGGCTTTCTTCTTGGGTTGGTCACGATTGCTGTCAATGGGAAGGGATTTCGTGCGACAACCTCACTGGTCACGCTACAAAAATTGACCTCCGTAATACTTATGCAACTCGGTGGTTGGGAGGTGATGTAGGGTGGGACGCTGTTGAAAGGTCTCGCTTGGCAGGTAAGGTAACTTCATCCTTGCTTACCTTGAAACATTTGAGCTACCTAGACCTAAGTTACAATCATTTCCAAGGGATTCACATTGTTTGCCAACTTCCAACTTTGAGATATTTCAACTTCTCATTTGCATCATCTGGGGGAGAATCTGAATTTCCCAAAAGCATTTTCAACCTTACCAACCTCCAAACACTTGACCTAAGTGGAAATTATTTCACCGGTCATTTTCCTCCCCAACTTGCAAGCCTCGAATCTCTTAAACACCTTGATTTATCTGATAATGACCTCAAAGGTAGAATTCCCAAACTCCTTGGAAACTTTTGCAATCTAAAGACCTTAAACCTCGCTCGCAACGAATTTGATGGGGGGTTTCAAGAGCTTTTGAGTGGTTTCTCAAATTGCACAAACAACAGATTAGAGTCACTAGATTTGTCTTCCAATGAGTTTGCAACAGAATTGTCTTGCTCCTTAAGAGTTCCAACAAACTTGCAGCACCTTGAGCTCCACAGCAACTTGTTTTGGGGCTCGTTTCCAACTTCTGTTGGAAACTTGTCATCCTTGAAAAGTCTAAACCTTTGGAACAACAACATGAACGGATCTATTCCCGAAAGTTTGGGCCAACTATCTGAGCTAGTTGACCTGGGTTTGGATGGGAATTCATGGGAAGGCATTTTAACAGAAACTCATTTCATAAATCTCACAAGACTGCAATCTCTTTATCTGTCCACGGATGGAGCTATGCCGCTCATTTTCAATGTGAGTTATGAGTGGATTCCCCCCTTCCAGCTCCACACAATTTACATTACAAATTGTAGTGTAGGTCCTGCATTTCCTGTATGGCTTCAATCTCAAACTGAGCTACTTTATGTCACCCTTAGTAGTACCAGAATCTCAGATTCTATACCAGAGGAATGGTTCTTCAACTTATCTTCCAAAGTTGAATATTTGGTTTTATCTCGCAACCAAATCCGCGGAAAGCTTCAATCCCAACTCAAATTTCCAAATTTACATTATATGGATTTGAGTCGTAATCAATTTGAAGGTCCACTTCCACATTTCTCTTCTGATGCCACTTATCTTCATCTCCAAAGTAATAGTTTTTCCGGGCCTATTCCTTCAAATTTCGGACAACTGATGCCCAAATTAAGATATTTGAATCTTGCGGAGAATCACTTGAATGGTACAATTCCATCCTCTCTATGCGACATGCAGAACTTGACAATCCTGTCCCTAAGGAGCAATCAGTTTTACGGAGAATTCCCAGAAGCATGGAGTGTGTGGCATGATATATGGGTTGTTGATGTGGCAGACAATAACCTCTCTGGTAATATTCCGAGTTCAATGGGGGTCCCGAGTTCTCTACATATATTGAAGATGAACAACAACAATTTTGGTGGCGAAATTCCTTTCGAGTTGAAGAATGCAACTTACTTGAGCAGTATTGATCTTGGGGGCAACAAATTAACCGGAAGTGTTCCTTTATGGATCGGATCAAACAACTCCTATTTGTCTACGCTTCGTTTGCACTCCAACTTTTTAAGTGGACATATCCCGCGCCATCTTTGCAATCTTCCCTTCCTTCACATCCTAGACCTTGGCCATAACAATCTTTCAGGGACCATTCCCAAGTGTTTGAAGAATTTGACGACTTTGACTTTCTCTCCATCCAATAATTATTCAGACACTAGATATGATGAGATCCAAACAACAGTCACGGCGAAAGGAAGCGAACTCGTTTATTACAGCACTGCTTTGAAATGGGTTTATAGCATTGATCTTTCATCAAATAATTTAGAAGGCGAAATTCCTGAAGAAATGACCAGCCTCATTGCATTGGGAACCTTGAACTTGTCAAGAAATCAGTTAAGGGGGAACATTCCCTCAACGATTGGAAATTTGCATTGGTTGGAAACTCTTGATCTCTCACACAATCGCCTTTCGGGACAAATTCCTCAAAGTTACTCCTCTTTATCGCTCTTGGCTCATGTGAACTTGTCTTTCAACAACTTGGCTGGAAGAATTCCTTCGGGCAACCAACTCCAGACGCTTGAGGACTCTTCCATTTATGAAGGCAATCCATTACTCTGTGGGGTTCCTCTTTCAACCAAGTGCCCGGGAGATGAAACACCGCCTTTTCCCTCTAGTGATGCAGGAGATAATAAAGATGATGACGATAATGGAAAGCTTTGGCTCTATGTCAGTATCACACTCGGCTTCATTACAAGCTTTTGGGGAGTTTGTGGCACATTAATCGTAAAGAAGTCATGGAGGTATGCCTATTTTCATTTCTTTGATGATATGAAAGATAAAGTAGCATTAGCAATTGCATTGAAAGTGGCTCGGTTGCAAAGAAAAATTTGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0000003 GO:0003006 GO:0005575 GO:0005618 GO:0005623 GO:0007275 GO:0007389 GO:0008150 GO:0009505 GO:0009531 GO:0009553 GO:0009653 GO:0009790 GO:0009791 GO:0009793 GO:0009798 GO:0009888 GO:0010154 GO:0010453 GO:0022414 GO:0022603 GO:0030312 GO:0032501 GO:0032502 GO:0042659 GO:0044426 GO:0044462 GO:0044464 GO:0045595 GO:0048226 GO:0048229 GO:0048316 GO:0048608 GO:0048731 GO:0048856 GO:0050789 GO:0050793 GO:0050794 GO:0051239 GO:0051302 GO:0061458 GO:0065001 GO:0065007 GO:0071944 GO:0090558 GO:0090708 GO:0099402 GO:1905392 GO:1905421 GO:2000026 GO:2000067 GO:2000280

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

LRRNT_2 LRR_1 LRR_6 LRR_8

Protein Analysis

937

Amino Acids

104.57

Weight (kDa)

5.96

Isoelectric Point (pI)

42.32

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
LRRNT_2	PF08263	79 - 116	8.5e-12	Leucine rich repeat N-terminal domain
LRR_14	PF23598	154 - 267	6e-10	Leucine-rich repeat region
LRR_8	PF13855	204 - 246	1.3e-06	Leucine rich repeat
LRR_14	PF23598	289 - 442	5.3e-11	Leucine-rich repeat region
LRR_8	PF13855	311 - 369	1.4e-06	Leucine rich repeat
LRR_8	PF13855	508 - 566	2.2e-07	Leucine rich repeat

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

Font Size (px)

Line Width

Align Labels (Cladogram)

Image

Tree File

Tip: Beautify your tree with professional tools

Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.

Publication-ready

iTOL Interactive Tree Of Life · Most popular EvolView Flexible annotations MEGA Desktop phylogenetics suite FigTree Desktop tree editor

Orthologous Genes (Group: OG0000048)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT2G34930
fragaria_vesca	FvH4_3g12670 FvH4_3g12672 FvH4_3g12740 FvH4_3g12742 FvH4_3g12770 FvH4_3g12770 FvH4_3g12860 FvH4_3g12890 FvH4_3g13431 FvH4_3g13433 FvH4_3g13435 FvH4_3g13470 FvH4_3g13470 FvH4_3g13480 FvH4_3g13562 FvH4_3g13580 FvH4_3g13600 FvH4_3g13600 FvH4_3g13600 FvH4_3g13600 FvH4_3g13600 FvH4_3g13600 FvH4_3g13610 FvH4_3g13620 FvH4_3g13620 FvH4_3g23240 FvH4_3g32910 FvH4_3g35070 FvH4_3g45520 FvH4_5g08430 FvH4_5g08450 FvH4_6g53230 FvH4_6g53300
malus_domestica	MD05G1217600.v1.1 MD05G1217700.v1.1 MD05G1224700.v1.1 MD05G1225100.v1.1 MD05G1225300.v1.1 MD05G1225400.v1.1 MD05G1235900.v1.1 MD05G1236100.v1.1 MD05G1236300.v1.1 MD05G1237200.v1.1 MD05G1241600.v1.1 MD05G1245700.v1.1 MD05G1245800.v1.1 MD05G1245900.v1.1 MD05G1246000.v1.1 MD05G1246100.v1.1 MD05G1246300.v1.1 MD05G1246400.v1.1 MD05G1246500.v1.1 MD05G1248100.v1.1 MD05G1248200.v1.1 MD05G1264300.v1.1 MD05G1275900.v1.1 MD07G1051400.v1.1 MD09G1012600.v1.1 MD09G1012700.v1.1 MD09G1012800.v1.1 MD10G1221400.v1.1 MD10G1221500.v1.1 MD10G1221600.v1.1 MD10G1221900.v1.1 MD10G1222200.v1.1 MD10G1222400.v1.1 MD10G1222500.v1.1 MD10G1222900.v1.1 MD10G1223000.v1.1 MD10G1223100.v1.1 MD10G1223500.v1.1 MD10G1228000.v1.1 MD12G1019600.v1.1 MD12G1020000.v1.1 MD12G1020100.v1.1 MD17G1013200.v1.1 MD17G1013300.v1.1 MD17G1013400.v1.1
prunus_persica	Prupe.1G060500_v2.0.a1 Prupe.1G100100_v2.0.a1 Prupe.3G124000_v2.0.a1 Prupe.3G304400_v2.0.a1 Prupe.4G116800_v2.0.a1 Prupe.4G116900_v2.0.a1 Prupe.4G117000_v2.0.a1 Prupe.4G121800_v2.0.a1 Prupe.4G121900_v2.0.a1 Prupe.4G122000_v2.0.a1 Prupe.4G122100_v2.0.a1 Prupe.4G122200_v2.0.a1 Prupe.4G122300_v2.0.a1 Prupe.4G122500_v2.0.a1 Prupe.4G122600_v2.0.a1 Prupe.4G122800_v2.0.a1 Prupe.4G122900_v2.0.a1 Prupe.4G123000_v2.0.a1 Prupe.4G123100_v2.0.a1 Prupe.4G123200_v2.0.a1 Prupe.4G131500_v2.0.a1 Prupe.4G131600_v2.0.a1 Prupe.7G032500_v2.0.a1 Prupe.7G032900_v2.0.a1 Prupe.7G033000_v2.0.a1 Prupe.7G033100_v2.0.a1 Prupe.7G033300_v2.0.a1 Prupe.7G033600_v2.0.a1 Prupe.7G034600_v2.0.a1 Prupe.7G040200_v2.0.a1 Prupe.7G059200_v2.0.a1
pyrus_communis	pycom05g20580 pycom05g20590 pycom05g20760 pycom05g20800 pycom05g21280 pycom05g21290 pycom05g21820 pycom05g21830 pycom05g22180 pycom05g22190 pycom05g22210 pycom05g22450 pycom05g22460 pycom05g22470 pycom05g22480 pycom05g22490 pycom05g23770 pycom05g23780 pycom05g24050 pycom05g24060 pycom07g03910 pycom10g18700 pycom10g18720 pycom10g18730 pycom10g18740 pycom10g19150 pycom111g01060 pycom12g01660 pycom12g01690 pycom12g01720 pycom12g01740 pycom12g01750 pycom12g01770 pycom12g01810 pycom12g01820 pycom12g01830 pycom12g01840 pycom12g01870 pycom12g01900 pycom17g01060 pycom17g01070
rosa_chinensis	RchiOBHm_Chr1g0315041 RchiOBHm_Chr1g0315051 RchiOBHm_Chr1g0315071 RchiOBHm_Chr1g0315161 RchiOBHm_Chr1g0315211 RchiOBHm_Chr1g0315251 RchiOBHm_Chr1g0315321 RchiOBHm_Chr1g0315391 RchiOBHm_Chr1g0315451 RchiOBHm_Chr1g0315481 RchiOBHm_Chr1g0315551 RchiOBHm_Chr1g0315601 RchiOBHm_Chr1g0315621 RchiOBHm_Chr1g0359221 RchiOBHm_Chr2g0142981 RchiOBHm_Chr2g0143001 RchiOBHm_Chr2g0143061 RchiOBHm_Chr2g0143091 RchiOBHm_Chr2g0175321 RchiOBHm_Chr2g0175341 RchiOBHm_Chr2g0175361 RchiOBHm_Chr2g0175371 RchiOBHm_Chr3g0470491 RchiOBHm_Chr3g0480881 RchiOBHm_Chr3g0485511 RchiOBHm_Chr5g0020741 RchiOBHm_Chr5g0020901 RchiOBHm_Chr5g0020931 RchiOBHm_Chr5g0020941 RchiOBHm_Chr5g0020961 RchiOBHm_Chr5g0020971 RchiOBHm_Chr5g0021451 RchiOBHm_Chr5g0021531 RchiOBHm_Chr5g0021831 RchiOBHm_Chr5g0021841 RchiOBHm_Chr5g0021931 RchiOBHm_Chr5g0021941 RchiOBHm_Chr5g0021981 RchiOBHm_Chr5g0021991 RchiOBHm_Chr5g0022011 RchiOBHm_Chr5g0022181 RchiOBHm_Chr5g0022191 RchiOBHm_Chr5g0022211 RchiOBHm_Chr5g0022221 RchiOBHm_Chr5g0022231 RchiOBHm_Chr5g0022291 RchiOBHm_Chr5g0022301 RchiOBHm_Chr5g0022331 RchiOBHm_Chr5g0022361 RchiOBHm_Chr5g0022371 RchiOBHm_Chr5g0022381 RchiOBHm_Chr5g0022401 RchiOBHm_Chr5g0022431 RchiOBHm_Chr5g0022451 RchiOBHm_Chr5g0022541 RchiOBHm_Chr5g0022591 RchiOBHm_Chr5g0022601 RchiOBHm_Chr5g0022701 RchiOBHm_Chr5g0022741 RchiOBHm_Chr5g0022791 RchiOBHm_Chr5g0022811 RchiOBHm_Chr5g0022851 RchiOBHm_Chr5g0029441 RchiOBHm_Chr5g0041631 RchiOBHm_Chr5g0069391 RchiOBHm_Chr6g0273811 RchiOBHm_Chr6g0273831 RchiOBHm_Chr6g0275331 RchiOBHm_Chr7g0219061
rosa_laevigata	RLG00000002463 RLG00000020007 RLG00000020008 RLG00000022320 RLG00000022321 RLG00000023446 RLG00000030742 RLG00000030743 RLG00000030747 RLG00000032557 RLG00000032564 RLG00000032571 RLG00000032573 RLG00000032574 RLG00000032612 RLG00000032633 RLG00000032636 RLG00000032638 RLG00000032650 RLG00000032651 RLG00000032652 RLG00000032653 RLG00000032655 RLG00000032673 RLG00000032678 RLG00000032769 RLG00000032857 RLG00000033168 RLG00000033465 RLG00000034086 RLG00000034222 RLG00000035290
rosa_multiflora	Rmu_co8143358.1_g000001 Rmu_co8518791.1_g000001 Rmu_sc0000178.1_g000008 Rmu_sc0000178.1_g000014 Rmu_sc0000401.1_g000005 Rmu_sc0000401.1_g000013 Rmu_sc0000401.1_g000017 Rmu_sc0000401.1_g000018 Rmu_sc0000401.1_g000024 Rmu_sc0000401.1_g000025 Rmu_sc0000576.1_g000020 Rmu_sc0001585.1_g000003 Rmu_sc0001585.1_g000005 Rmu_sc0001585.1_g000008 Rmu_sc0001784.1_g000006 Rmu_sc0001784.1_g000011 Rmu_sc0001784.1_g000022 Rmu_sc0001784.1_g000028 Rmu_sc0002052.1_g000004 Rmu_sc0002052.1_g000011 Rmu_sc0002277.1_g000003 Rmu_sc0002277.1_g000006 Rmu_sc0002277.1_g000024 Rmu_sc0002658.1_g000012 Rmu_sc0003512.1_g000004 Rmu_sc0003512.1_g000007 Rmu_sc0004180.1_g000016 Rmu_sc0004180.1_g000029 Rmu_sc0004180.1_g000034 Rmu_sc0005639.1_g000008 Rmu_sc0005639.1_g000023 Rmu_sc0006070.1_g000016 Rmu_sc0006070.1_g000017 Rmu_sc0006966.1_g000021 Rmu_sc0006966.1_g000023 Rmu_sc0007239.1_g000003 Rmu_sc0008460.1_g000010 Rmu_sc0009984.1_g000008 Rmu_sc0010181.1_g000005 Rmu_sc0010181.1_g000010 Rmu_sc0010503.1_g000006 Rmu_sc0011646.1_g000003 Rmu_sc0012984.1_g000011 Rmu_sc0016972.1_g000005 Rmu_sc0016972.1_g000008 Rmu_sc0023070.1_g000003 Rmu_sc0025660.1_g000001 Rmu_ssc0000322.1_g000019
rosa_roxburghii	Rroxscaffold_1G00038860 Rroxscaffold_1G00053490 Rroxscaffold_1G00053500 Rroxscaffold_1G00054230 Rroxscaffold_1G00056460 Rroxscaffold_1G00056470 Rroxscaffold_1G00056480 Rroxscaffold_1G00056500 Rroxscaffold_1G00056510 Rroxscaffold_1G00056620 Rroxscaffold_1G00056690 Rroxscaffold_1G00056710 Rroxscaffold_1G00056720 Rroxscaffold_1G00056730 Rroxscaffold_1G00056740 Rroxscaffold_1G00056750 Rroxscaffold_1G00056760 Rroxscaffold_1G00056870 Rroxscaffold_1G00056900 Rroxscaffold_1G00057120 Rroxscaffold_1G00057560 Rroxscaffold_2G00077430 Rroxscaffold_2G00102160 Rroxscaffold_3G00231420 Rroxscaffold_3G00231430 Rroxscaffold_4G00297230 Rroxscaffold_4G00331570 Rroxscaffold_6G00396700 Rroxscaffold_6G00400940 Rroxscaffold_7G00192740
rosa_rugosa	Rorug01G0004400 Rorug01G0004500 Rorug02G0377600 Rorug02G0378000 Rorug02G0582800 Rorug02G0583400 Rorug03G0187000 Rorug03G0218800 Rorug04G0081200 Rorug05G0062700 Rorug05G0062700 Rorug05G0063100 Rorug05G0063200 Rorug05G0063200 Rorug05G0063200 Rorug05G0067000 Rorug05G0069700 Rorug05G0069900 Rorug05G0070000 Rorug05G0070100 Rorug05G0070300 Rorug05G0070400 Rorug05G0070600 Rorug05G0070600 Rorug05G0072300 Rorug05G0072400 Rorug05G0072500 Rorug05G0072500 Rorug05G0072600.1 Rorug05G0072700 Rorug05G0072800 Rorug05G0072800 Rorug05G0072900 Rorug05G0073000 Rorug05G0073000 Rorug05G0073400 Rorug05G0073400 Rorug05G0073400 Rorug05G0074800 Rorug05G0075000 Rorug05G0114300 Rorug05G0194200 Rorug06G0097800
rosa_samantha	Rh2AG401400 Rh2CG387600 Rh2CG417000 Rh2CG637400 Rh5CG169600 Rh5CG172100 Rh5CG175200 Rh5CG317100 Rh6DG187900
rosa_wichuraiana	Rw1G000750 Rw1G000790 Rw1G000820 Rw1G000860 Rw1G000880 Rw1G000910 Rw2G035180 Rw2G035200 Rw2G035240 Rw2G054370 Rw2G054380 Rw5G013570 Rw5G013580 Rw5G013590 Rw5G013910 Rw5G013980 Rw5G014110 Rw5G014120 Rw5G014280 Rw5G014310 Rw5G014400 Rw5G014420 Rw5G014440 Rw5G014460 Rw5G014480 Rw5G014500 Rw5G014520 Rw5G014530 Rw5G042390

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AasI	GACNNNNNNGTC	1 cut(s)	1675
Acc36I	ACCTGC	1 cut(s)	443
AccBSI	CCGCTC	1 cut(s)	1195
AccI	GTMKAC	1 cut(s)	1961
AccII	CGCG	2 cut(s)	1422, 2005
AciI	CCGC	7 cut(s)	6, 1193, 1420, 1422, 1613, 2003, 2579
AclWI	GGATC	4 cut(s)	1054, 1943, 1948, 2143
AcoI	YGGCCR	1 cut(s)	2047
AcuI	CTGAAG	2 cut(s)	34, 2280
AfaI	GTAC	2 cut(s)	1333, 1633
AfiI	CCNNNNNNNGG	1 cut(s)	1096
AflII	CTTAAG	1 cut(s)	919
AgeI	ACCGGT	1 cut(s)	668
AjnI	CCWGG	1 cut(s)	1089
AjuI	GAANNNNNNNTTGG	6 cut(s)	602, 634, 1431, 1463, 2335, 2367
Alw21I	GWGCWC	2 cut(s)	253, 954
Alw26I	GTCTC	1 cut(s)	447
AlwI	GGATC	4 cut(s)	1054, 1943, 1948, 2143
AlwNI	CAGNNNCTG	1 cut(s)	218
Ama87I	CYCGRG	2 cut(s)	1801, 2563
AoxI	GGCC	4 cut(s)	195, 1066, 1556, 2047
ApeKI	GCWGC	1 cut(s)	940
AseI	ATTAAT	1 cut(s)	2699
AsiGI	ACCGGT	1 cut(s)	668
Asp700I	GAANNNNTTC	1 cut(s)	2473
AspLEI	GCGC	1 cut(s)	2007
AspS9I	GGNCC	6 cut(s)	1066, 1271, 1493, 1556, 1798, 2067
AsuC2I	CCSGG	3 cut(s)	1555, 2564, 2565
AsuHPI	GGTGA	6 cut(s)	71, 158, 268, 425, 658, 1312
AvaI	CYCGRG	2 cut(s)	1801, 2563
AvaII	GGWCC	4 cut(s)	1271, 1493, 1798, 2067
AxyI	CCTNAGG	1 cut(s)	1682
BaeGI	GKGCMC	1 cut(s)	2564
BalI	TGGCCA	1 cut(s)	2049
BanII	GRGCYC	2 cut(s)	954, 977
BarI	GAAGNNNNNNTAC	2 cut(s)	448, 480
BbsI	GAAGAC	1 cut(s)	876
Bbv12I	GWGCWC	2 cut(s)	253, 954
BbvI	GCAGC	1 cut(s)	952
BccI	CCATC	8 cut(s)	38, 103, 806, 1094, 1175, 1648, 2016, 2122
BceAI	ACGGC	1 cut(s)	2181
BcgI	CGANNNNNNTGC	2 cut(s)	2683, 2717
BciT130I	CCWGG	1 cut(s)	1091
BciVI	GTATCC	1 cut(s)	84
BcnI	CCSGG	3 cut(s)	1555, 2564, 2565
BcoDI	GTCTC	1 cut(s)	447
BfaI	CTAG	6 cut(s)	500, 875, 1082, 2039, 2136, 2592
BfrI	CTTAAG	1 cut(s)	919
BfuAI	ACCTGC	1 cut(s)	443
BfuI	GTATCC	1 cut(s)	84
BisI	GCNGC	2 cut(s)	941, 1193
BlsI	GCNGC	2 cut(s)	942, 1194
Bme1390I	CCNGG	4 cut(s)	1091, 1555, 2564, 2565
Bme18I	GGWCC	4 cut(s)	1271, 1493, 1798, 2067
BmeT110I	CYCGRG	2 cut(s)	1801, 2563
BmgT120I	GGNCC	6 cut(s)	1066, 1271, 1493, 1556, 1798, 2067
BmiI	GGNNCC	6 cut(s)	137, 1799, 1800, 2068, 2290, 2544
BmrFI	CCNGG	4 cut(s)	1091, 1555, 2564, 2565
BmsI	GCATC	5 cut(s)	240, 590, 1507, 1575, 2587
BpiI	GAAGAC	1 cut(s)	876
BplI	GAGNNNNNCTC	2 cut(s)	240, 272
BpmI	CTGGAG	1 cut(s)	2474
BpuEI	CTTGAG	3 cut(s)	968, 1903, 2519
BpuMI	CCSGG	3 cut(s)	1555, 2564, 2565
Bsa29I	ATCGAT	1 cut(s)	33
BsaI	GGTCTC	1 cut(s)	447
BsaJI	CCNNGG	7 cut(s)	523, 760, 1090, 1176, 1420, 2044, 2563
BsaWI	WCCGGW	2 cut(s)	668, 1916
BsaXI	ACNNNNNCTCC	4 cut(s)	402, 432, 2095, 2125
Bsc4I	CCNNNNNNNGG	1 cut(s)	1096
Bse118I	RCCGGY	1 cut(s)	668
Bse1I	ACTGG	1 cut(s)	361
Bse21I	CCTNAGG	1 cut(s)	1682
Bse3DI	GCAATG	1 cut(s)	2277
BseBI	CCWGG	1 cut(s)	1091
BseCI	ATCGAT	1 cut(s)	33
BseDI	CCNNGG	7 cut(s)	523, 760, 1090, 1176, 1420, 2044, 2563
BseGI	GGATG	7 cut(s)	467, 1004, 1105, 1186, 1640, 2034, 2114
BseLI	CCNNNNNNNGG	1 cut(s)	1096
BseMI	GCAATG	1 cut(s)	2277
BseMII	CTCAG	5 cut(s)	97, 271, 1068, 1296, 1356
BseNI	ACTGG	1 cut(s)	361
BseRI	GAGGAG	2 cut(s)	261, 2404
BseSI	GKGCMC	1 cut(s)	2564
BseXI	GCAGC	1 cut(s)	952
Bsh1236I	CGCG	2 cut(s)	1422, 2005
BshFI	GGCC	4 cut(s)	197, 1068, 1558, 2049
BshTI	ACCGGT	1 cut(s)	668
BshVI	ATCGAT	1 cut(s)	33
BsiHKAI	GWGCWC	2 cut(s)	253, 954
BsiHKCI	CYCGRG	2 cut(s)	1801, 2563
BsiSI	CCGG	4 cut(s)	669, 1554, 1917, 2564
BslFI	GGGAC	6 cut(s)	271, 440, 1663, 1784, 2080, 2406
BslI	CCNNNNNNNGG	1 cut(s)	1096
BsmAI	GTCTC	1 cut(s)	447
BsmFI	GGGAC	6 cut(s)	271, 440, 1663, 1784, 2080, 2406
BsmI	GAATGC	1 cut(s)	1876
BsnI	GGCC	4 cut(s)	197, 1068, 1558, 2049
Bso31I	GGTCTC	1 cut(s)	447
BsoBI	CYCGRG	2 cut(s)	1801, 2563
Bsp1286I	GDGCHC	4 cut(s)	253, 954, 977, 2564
Bsp143I	GATC	8 cut(s)	280, 1046, 1894, 1935, 1940, 2148, 2224, 2368
BspACI	CCGC	7 cut(s)	6, 1193, 1420, 1422, 1613, 2003, 2579
BspANI	GGCC	4 cut(s)	197, 1068, 1558, 2049
BspCNI	CTCAG	5 cut(s)	96, 270, 1069, 1297, 1355
BspDI	ATCGAT	1 cut(s)	33
BspFNI	CGCG	2 cut(s)	1422, 2005
BspLI	GGNNCC	6 cut(s)	137, 1799, 1800, 2068, 2290, 2544
BspMI	ACCTGC	1 cut(s)	443
BspPI	GGATC	4 cut(s)	1054, 1943, 1948, 2143
BspTI	CTTAAG	1 cut(s)	919
BspTNI	GGTCTC	1 cut(s)	447
BsrBI	CCGCTC	1 cut(s)	1195
BsrDI	GCAATG	1 cut(s)	2277
BsrFI	RCCGGY	1 cut(s)	668
BsrI	ACTGG	1 cut(s)	361
BssAI	RCCGGY	1 cut(s)	668
BssECI	CCNNGG	7 cut(s)	523, 760, 1090, 1176, 1420, 2044, 2563
BssMI	GATC	8 cut(s)	280, 1046, 1894, 1935, 1940, 2148, 2224, 2368
BssT1I	CCWWGG	3 cut(s)	523, 760, 2044
Bst2UI	CCWGG	1 cut(s)	1091
Bst4CI	ACNGT	1 cut(s)	2161
Bst6I	CTCTTC	4 cut(s)	205, 234, 1516, 2512
BstAFI	CTTAAG	1 cut(s)	919
BstC8I	GCNNGC	4 cut(s)	92, 145, 694, 799
BstDEI	CTNAG	9 cut(s)	83, 257, 506, 650, 1077, 1305, 1325, 1342, 1682
BstDSI	CCRYGG	2 cut(s)	1176, 1420
BstF5I	GGATG	7 cut(s)	467, 1004, 1105, 1186, 1640, 2034, 2114
BstFNI	CGCG	2 cut(s)	1422, 2005
BstHHI	GCGC	1 cut(s)	2007
BstKTI	GATC	8 cut(s)	283, 1049, 1897, 1938, 1943, 2151, 2227, 2371
BstMAI	GTCTC	1 cut(s)	447
BstMBI	GATC	8 cut(s)	280, 1046, 1894, 1935, 1940, 2148, 2224, 2368
BstMWI	GCNNNNNNNGC	3 cut(s)	949, 1972, 2013
BstNI	CCWGG	1 cut(s)	1091
BstNSI	RCATGY	1 cut(s)	1660
BstSCI	CCNGG	4 cut(s)	1089, 1553, 2562, 2563
BstSLI	GKGCMC	1 cut(s)	2564
BstUI	CGCG	2 cut(s)	1422, 2005
BstV1I	GCAGC	1 cut(s)	952
BstV2I	GAAGAC	1 cut(s)	876
BstX2I	RGATCY	2 cut(s)	1046, 2148
BstXI	CCANNNNNNTGG	2 cut(s)	1362, 1719
BstYI	RGATCY	2 cut(s)	1046, 2148
Bsu15I	ATCGAT	1 cut(s)	33
Bsu36I	CCTNAGG	1 cut(s)	1682
BsuI	GTATCC	1 cut(s)	84
BsuRI	GGCC	4 cut(s)	197, 1068, 1558, 2049
BsuTUI	ATCGAT	1 cut(s)	33
BtgI	CCRYGG	2 cut(s)	1176, 1420
BtsCI	GGATG	7 cut(s)	467, 1004, 1105, 1186, 1640, 2034, 2114
BtsI	GCAGTG	2 cut(s)	216, 2196
BtsIMutI	CAGTG	3 cut(s)	216, 354, 2196
BveI	ACCTGC	1 cut(s)	443
Cac8I	GCNNGC	4 cut(s)	92, 145, 694, 799
CaiI	CAGNNNCTG	1 cut(s)	218
CfoI	GCGC	1 cut(s)	2007
Cfr10I	RCCGGY	1 cut(s)	668
Cfr13I	GGNCC	6 cut(s)	1066, 1271, 1493, 1556, 1798, 2067
Cfr42I	CCGCGG	1 cut(s)	1423
Cfr9I	CCCGGG	1 cut(s)	2563
ClaI	ATCGAT	1 cut(s)	33
CseI	GACGC	2 cut(s)	437, 2503
Csp6I	GTAC	2 cut(s)	1332, 1632
CspAI	ACCGGT	1 cut(s)	668
CspCI	CAANNNNNGTGG	2 cut(s)	1825, 1860
CviAII	CATG	9 cut(s)	140, 228, 1039, 1110, 1657, 1719, 1733, 2435, 2715
CviQI	GTAC	2 cut(s)	1332, 1632
DdeI	CTNAG	9 cut(s)	83, 257, 506, 650, 1077, 1305, 1325, 1342, 1682
DpnI	GATC	8 cut(s)	282, 1048, 1896, 1937, 1942, 2150, 2226, 2370
DpnII	GATC	8 cut(s)	280, 1046, 1894, 1935, 1940, 2148, 2224, 2368
DraI	TTTAAA	1 cut(s)	265
DrdI	GACNNNNNNGTC	1 cut(s)	1675
DseDI	GACNNNNNNGTC	1 cut(s)	1675
EaeI	YGGCCR	1 cut(s)	2047
Eam1104I	CTCTTC	4 cut(s)	205, 234, 1516, 2512
EarI	CTCTTC	4 cut(s)	205, 234, 1516, 2512
EciI	GGCGGA	1 cut(s)	21
Ecl136II	GAGCTC	1 cut(s)	952
Eco130I	CCWWGG	3 cut(s)	523, 760, 2044
Eco24I	GRGCYC	2 cut(s)	954, 977
Eco31I	GGTCTC	1 cut(s)	447
Eco47I	GGWCC	4 cut(s)	1271, 1493, 1798, 2067
Eco53kI	GAGCTC	1 cut(s)	952
Eco57I	CTGAAG	2 cut(s)	34, 2280
Eco81I	CCTNAGG	1 cut(s)	1682
Eco88I	CYCGRG	2 cut(s)	1801, 2563
EcoICRI	GAGCTC	1 cut(s)	952
EcoO109I	RGGNCCY	2 cut(s)	1271, 1798
EcoRI	GAATTC	4 cut(s)	747, 1105, 1706, 2469
EcoRII	CCWGG	1 cut(s)	1089
EcoT14I	CCWWGG	3 cut(s)	523, 760, 2044
EcoT22I	ATGCAT	1 cut(s)	233
EcoT38I	GRGCYC	2 cut(s)	954, 977
ErhI	CCWWGG	3 cut(s)	523, 760, 2044
FaeI	CATG	9 cut(s)	143, 231, 1042, 1113, 1660, 1722, 1736, 2438, 2718
FalI	AAGNNNNNCTT	8 cut(s)	101, 133, 1482, 1514, 1912, 1944, 2458, 2490
FaqI	GGGAC	6 cut(s)	271, 440, 1663, 1784, 2080, 2406
FatI	CATG	9 cut(s)	139, 227, 1038, 1109, 1656, 1718, 1732, 2434, 2714
FauI	CCCGC	1 cut(s)	2010
FblI	GTMKAC	1 cut(s)	1961
Fnu4HI	GCNGC	2 cut(s)	941, 1193
FokI	GGATG	7 cut(s)	454, 991, 1112, 1193, 1627, 2021, 2101
FriOI	GRGCYC	2 cut(s)	954, 977
Fsp4HI	GCNGC	2 cut(s)	941, 1193
FspBI	CTAG	6 cut(s)	500, 875, 1082, 2039, 2136, 2592
GlaI	GCGC	1 cut(s)	2006
GluI	GCNGC	2 cut(s)	941, 1193
GsuI	CTGGAG	1 cut(s)	2474
HaeIII	GGCC	4 cut(s)	197, 1068, 1558, 2049
HapII	CCGG	4 cut(s)	669, 1554, 1917, 2564
HgaI	GACGC	2 cut(s)	437, 2503
HhaI	GCGC	1 cut(s)	2007
Hin1II	CATG	9 cut(s)	143, 231, 1042, 1113, 1660, 1722, 1736, 2438, 2718
Hin6I	GCGC	1 cut(s)	2005
HinP1I	GCGC	1 cut(s)	2005
HincII	GTYRAC	1 cut(s)	1087
HindII	GTYRAC	1 cut(s)	1087
HindIII	AAGCTT	4 cut(s)	46, 1427, 2633, 2674
HpaII	CCGG	4 cut(s)	669, 1554, 1917, 2564
HphI	GGTGA	6 cut(s)	71, 158, 268, 425, 658, 1312
Hpy166II	GTNNAC	6 cut(s)	1087, 1176, 1496, 1962, 1994, 2440
Hpy188I	TCNGA	9 cut(s)	601, 727, 1078, 1345, 1516, 1577, 1785, 1940, 2131
Hpy188III	TCNNGA	9 cut(s)	314, 824, 1055, 1801, 2258, 2304, 2366, 2391, 2491
Hpy8I	GTNNAC	6 cut(s)	1087, 1176, 1496, 1962, 1994, 2440
Hpy99I	CGWCG	1 cut(s)	294
HpyCH4III	ACNGT	1 cut(s)	2161
HpyF10VI	GCNNNNNNNGC	3 cut(s)	949, 1972, 2013
HpyF3I	CTNAG	9 cut(s)	83, 257, 506, 650, 1077, 1305, 1325, 1342, 1682
Hsp92II	CATG	9 cut(s)	143, 231, 1042, 1113, 1660, 1722, 1736, 2438, 2718
HspAI	GCGC	1 cut(s)	2005
KflI	GGGWCCC	1 cut(s)	1798
KspI	CCGCGG	1 cut(s)	1423
Kzo9I	GATC	8 cut(s)	280, 1046, 1894, 1935, 1940, 2148, 2224, 2368
LmnI	GCTCC	6 cut(s)	248, 920, 957, 1184, 1242, 1686
Lsp1109I	GCAGC	1 cut(s)	952
LweI	GCATC	5 cut(s)	240, 590, 1507, 1575, 2587
MaeI	CTAG	6 cut(s)	500, 875, 1082, 2039, 2136, 2592
MaeIII	GTNAC	9 cut(s)	214, 311, 359, 460, 509, 870, 1318, 2161, 2408
MalI	GATC	8 cut(s)	282, 1048, 1896, 1937, 1942, 2150, 2226, 2370
MbiI	CCGCTC	1 cut(s)	1195
MboI	GATC	8 cut(s)	280, 1046, 1894, 1935, 1940, 2148, 2224, 2368
MfeI	CAATTG	1 cut(s)	2772
MflI	RGATCY	2 cut(s)	1046, 2148
MhlI	GDGCHC	4 cut(s)	253, 954, 977, 2564
MlsI	TGGCCA	1 cut(s)	2049
MluNI	TGGCCA	1 cut(s)	2049
MlyI	GAGTC	3 cut(s)	878, 1483, 2498
MmeI	TCCRAC	6 cut(s)	575, 953, 973, 1007, 2004, 2337
Mox20I	TGGCCA	1 cut(s)	2049
Mph1103I	ATGCAT	1 cut(s)	233
MroXI	GAANNNNTTC	1 cut(s)	2473
MscI	TGGCCA	1 cut(s)	2049
MslI	CAYNNNNRTG	1 cut(s)	1626
Msp20I	TGGCCA	1 cut(s)	2049
MspA1I	CMGCKG	1 cut(s)	1422
MspCI	CTTAAG	1 cut(s)	919
MspI	CCGG	4 cut(s)	669, 1554, 1917, 2564
MspR9I	CCNGG	4 cut(s)	1091, 1555, 2564, 2565
MunI	CAATTG	1 cut(s)	2772
Mva1269I	GAATGC	1 cut(s)	1876
MvaI	CCWGG	1 cut(s)	1091
MvnI	CGCG	2 cut(s)	1422, 2005
MwoI	GCNNNNNNNGC	3 cut(s)	949, 1972, 2013
NciI	CCSGG	3 cut(s)	1555, 2564, 2565
NdeII	GATC	8 cut(s)	280, 1046, 1894, 1935, 1940, 2148, 2224, 2368
NlaIII	CATG	9 cut(s)	143, 231, 1042, 1113, 1660, 1722, 1736, 2438, 2718
NlaIV	GGNNCC	6 cut(s)	137, 1799, 1800, 2068, 2290, 2544
NmeAIII	GCCGAG	1 cut(s)	2640
NmuCI	GTSAC	6 cut(s)	214, 311, 359, 870, 1318, 2161
NsiI	ATGCAT	1 cut(s)	233
NspI	RCATGY	1 cut(s)	1660
PcsI	WCGNNNNNNNCGW	2 cut(s)	30, 801
PctI	GAATGC	1 cut(s)	1876
PdmI	GAANNNNTTC	1 cut(s)	2473
PfeI	GAWTC	8 cut(s)	529, 596, 701, 1222, 1338, 1346, 1606, 1618
PinAI	ACCGGT	1 cut(s)	668
PkrI	GCNGC	2 cut(s)	942, 1194
PleI	GAGTC	3 cut(s)	877, 1482, 2498
PpsI	GAGTC	3 cut(s)	877, 1482, 2498
PpuMI	RGGWCCY	2 cut(s)	1271, 1798
PshBI	ATTAAT	1 cut(s)	2699
Psp124BI	GAGCTC	1 cut(s)	954
Psp5II	RGGWCCY	2 cut(s)	1271, 1798
Psp6I	CCWGG	1 cut(s)	1089
PspGI	CCWGG	1 cut(s)	1089
PspN4I	GGNNCC	6 cut(s)	137, 1799, 1800, 2068, 2290, 2544
PspPI	GGNCC	6 cut(s)	1066, 1271, 1493, 1556, 1798, 2067
PspPPI	RGGWCCY	2 cut(s)	1271, 1798
PstNI	CAGNNNCTG	1 cut(s)	218
PsuI	RGATCY	2 cut(s)	1046, 2148
RsaI	GTAC	2 cut(s)	1333, 1633
RsaNI	GTAC	2 cut(s)	1332, 1632
RseI	CAYNNNNRTG	1 cut(s)	1626
SacI	GAGCTC	1 cut(s)	954
SacII	CCGCGG	1 cut(s)	1423
SatI	GCNGC	2 cut(s)	941, 1193
Sau3AI	GATC	8 cut(s)	280, 1046, 1894, 1935, 1940, 2148, 2224, 2368
Sau96I	GGNCC	6 cut(s)	1066, 1271, 1493, 1556, 1798, 2067
SchI	GAGTC	3 cut(s)	878, 1483, 2498
ScrFI	CCNGG	4 cut(s)	1091, 1555, 2564, 2565
SduI	GDGCHC	4 cut(s)	253, 954, 977, 2564
SfaNI	GCATC	5 cut(s)	240, 590, 1507, 1575, 2587
Sfr303I	CCGCGG	1 cut(s)	1423
SgrBI	CCGCGG	1 cut(s)	1423
SinI	GGWCC	4 cut(s)	1271, 1493, 1798, 2067
SmaI	CCCGGG	1 cut(s)	2565
SmiMI	CAYNNNNRTG	1 cut(s)	1626
SmlI	CTYRAG	4 cut(s)	919, 947, 1882, 2498
SmoI	CTYRAG	4 cut(s)	919, 947, 1882, 2498
SsiI	CCGC	7 cut(s)	6, 1193, 1420, 1422, 1613, 2003, 2579
SspI	AATATT	2 cut(s)	1394, 1780
SspMI	CTAG	6 cut(s)	500, 875, 1082, 2039, 2136, 2592
SstI	GAGCTC	1 cut(s)	954
StyD4I	CCNGG	4 cut(s)	1089, 1553, 2562, 2563
StyI	CCWWGG	3 cut(s)	523, 760, 2044
TaaI	ACNGT	1 cut(s)	2161
TaqI	TCGA	5 cut(s)	24, 33, 234, 699, 1860
TauI	GCSGC	1 cut(s)	1195
TfiI	GAWTC	8 cut(s)	529, 596, 701, 1222, 1338, 1346, 1606, 1618
TscAI	CASTG	3 cut(s)	223, 361, 2203
TseFI	GTSAC	6 cut(s)	214, 311, 359, 870, 1318, 2161
TseI	GCWGC	1 cut(s)	940
Tsp45I	GTSAC	6 cut(s)	214, 311, 359, 870, 1318, 2161
TspGWI	ACGGA	4 cut(s)	371, 1059, 1193, 1716
TspMI	CCCGGG	1 cut(s)	2563
TspRI	CASTG	3 cut(s)	223, 361, 2203
Vha464I	CTTAAG	1 cut(s)	919
VpaK11BI	GGWCC	4 cut(s)	1271, 1493, 1798, 2067
VspI	ATTAAT	1 cut(s)	2699
XceI	RCATGY	1 cut(s)	1660
XmaI	CCCGGG	1 cut(s)	2563
XmiI	GTMKAC	1 cut(s)	1961
XmnI	GAANNNNTTC	1 cut(s)	2473
XspI	CTAG	6 cut(s)	500, 875, 1082, 2039, 2136, 2592
Zsp2I	ATGCAT	1 cut(s)	233

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.