Rorug05G0072900

LRR receptor-like serine threonine-protein kinase

Basic Information

Type: gene
Biological Identity
rosa_rugosa
GWHBQTZ00000005
Physical Location & Seq
Forward (+)
6261633 .. 6264624
2992 bp
Loading structure...
UTR
Exon/CDS
Intron
Rorug05G0072900.1

Sequence Viewer

Length: 1167 bp
ATGTTCAGCTCAACCCAACACCCCCCTTCTCCCTCCGACGCCGCCTCGTCGCCGCTTCTCAGCAACTCCCTCGCCGAAAACCTCCTCCGCAGCCGCCGCCTCATCCGCCAGCCGCCGCGCCCTCTCCGCGGCGCGGCCCGCTTCCTCCGCCGAGCCAGCGGCCGCCGCATGAGGCTTCGAGAGCCTTCGGTCCGGGTTCGCGAGTCCGCGGCGGAGCAGCTGGAGGAGCGCCAGAGTGATTGGGCCTACTCCCGGCCCATTGTGGTGCTGGACCTGCTGTGGAACGCCGTGCTGCTCGGGATTGGGCTCGCCGTGCTTTGGTTTAGCTATGAGGAAAGCCCTGAGGTTCCTCTGAGGGTGTGGATTGGCGGCTACGCGCTGCAGTGCGCGGTGCATATGTTCTGTGTGGGCGTCGAGTGCACGCGGCGGCGGGGCGTGGGGGAGGGGGAGGGGGAGGTGGGGCGGGTGGCCGTGGAGGAAGGGAGTCCTCAGTGGGAGAGCTCTTCTGGTTCTGGGAGTGATGAGAGTGAAGATTATGGAATGGAGCAGAGCTTGGAATATAGTGCCACAAGTTTCGCAAAGAATTTGGAGTCTGCAAACACGATGTTTTCGTTTATCTGGTGGATTCTTGGGTTCTACTGGGTGACTGCTGGCGGTGAAAGTTTGACGACCGACTCCCCTCAATTATACTGGATCACTATCACCTTTCTGGCTTTGGATGTGGTTTTTGTTGTGATTTGCGTTGCCGTTGCATCCCTCATTGGTATAGCTGTTTGCTTCTGTCTGCCGTGCATCATTGCCATCTTATATGTCGTGACAGATCAGGAAGGAGCAACTAAGGAAGAGATCGATCATTTGCCAAAGTACAAGTTCCGCAAGATATCTGATTTTGAGAAAGTTAATGGTGAAATCCAAGACTCTTTTGGAGGAATAATGACCGAATGTGACACTGATGCACCAACGGAACATGCTCTCTCCCAAGAGGATGCTGAATGCTGCATCTGCCTTTGTGCCTATGATGATGGAACCGAACTGCGTGAGCTTCCTTGCCGTCATCATTTTCACTGCACCTGCATAGATAAATGGTTACAGATCAATGCCACCTGCCCGCTCTGCAAGTTCAACATTCTGAAGTCTGCTAGCCAGAGTAGCAGTGAAGAGGTATGA

Protein Analysis

388

Amino Acids

43.25

Weight (kDa)

4.89

Isoelectric Point (pI)

67.01

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
zf-RING_2 PF13639 331 - 373 1e-13 Ring finger domain
zf-RING_11 PF17123 331 - 359 3.2e-07 RING-like zinc finger
zf-rbx1 PF12678 331 - 373 1.4e-06 RING-H2 zinc finger domain
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready

Orthologous Genes (Group: OG0000048)

Species Orthologous Gene IDs
arabidopsis_thaliana AT2G34930
fragaria_vesca FvH4_3g12670 FvH4_3g12672 FvH4_3g12740 FvH4_3g12742 FvH4_3g12770 FvH4_3g12770 FvH4_3g12860 FvH4_3g12890 FvH4_3g13431 FvH4_3g13433 FvH4_3g13435 FvH4_3g13470 FvH4_3g13470 FvH4_3g13480 FvH4_3g13562 FvH4_3g13580 FvH4_3g13600 FvH4_3g13600 FvH4_3g13600 FvH4_3g13600 FvH4_3g13600 FvH4_3g13600 FvH4_3g13610 FvH4_3g13620 FvH4_3g13620 FvH4_3g23240 FvH4_3g32910 FvH4_3g35070 FvH4_3g45520 FvH4_5g08430 FvH4_5g08450 FvH4_6g53230 FvH4_6g53300
malus_domestica MD05G1217600.v1.1 MD05G1217700.v1.1 MD05G1224700.v1.1 MD05G1225100.v1.1 MD05G1225300.v1.1 MD05G1225400.v1.1 MD05G1235900.v1.1 MD05G1236100.v1.1 MD05G1236300.v1.1 MD05G1237200.v1.1 MD05G1241600.v1.1 MD05G1245700.v1.1 MD05G1245800.v1.1 MD05G1245900.v1.1 MD05G1246000.v1.1 MD05G1246100.v1.1 MD05G1246300.v1.1 MD05G1246400.v1.1 MD05G1246500.v1.1 MD05G1248100.v1.1 MD05G1248200.v1.1 MD05G1264300.v1.1 MD05G1275900.v1.1 MD07G1051400.v1.1 MD09G1012600.v1.1 MD09G1012700.v1.1 MD09G1012800.v1.1 MD10G1221400.v1.1 MD10G1221500.v1.1 MD10G1221600.v1.1 MD10G1221900.v1.1 MD10G1222200.v1.1 MD10G1222400.v1.1 MD10G1222500.v1.1 MD10G1222900.v1.1 MD10G1223000.v1.1 MD10G1223100.v1.1 MD10G1223500.v1.1 MD10G1228000.v1.1 MD12G1019600.v1.1 MD12G1020000.v1.1 MD12G1020100.v1.1 MD17G1013200.v1.1 MD17G1013300.v1.1 MD17G1013400.v1.1
prunus_persica Prupe.1G060500_v2.0.a1 Prupe.1G100100_v2.0.a1 Prupe.3G124000_v2.0.a1 Prupe.3G304400_v2.0.a1 Prupe.4G116800_v2.0.a1 Prupe.4G116900_v2.0.a1 Prupe.4G117000_v2.0.a1 Prupe.4G121800_v2.0.a1 Prupe.4G121900_v2.0.a1 Prupe.4G122000_v2.0.a1 Prupe.4G122100_v2.0.a1 Prupe.4G122200_v2.0.a1 Prupe.4G122300_v2.0.a1 Prupe.4G122500_v2.0.a1 Prupe.4G122600_v2.0.a1 Prupe.4G122800_v2.0.a1 Prupe.4G122900_v2.0.a1 Prupe.4G123000_v2.0.a1 Prupe.4G123100_v2.0.a1 Prupe.4G123200_v2.0.a1 Prupe.4G131500_v2.0.a1 Prupe.4G131600_v2.0.a1 Prupe.7G032500_v2.0.a1 Prupe.7G032900_v2.0.a1 Prupe.7G033000_v2.0.a1 Prupe.7G033100_v2.0.a1 Prupe.7G033300_v2.0.a1 Prupe.7G033600_v2.0.a1 Prupe.7G034600_v2.0.a1 Prupe.7G040200_v2.0.a1 Prupe.7G059200_v2.0.a1
pyrus_communis pycom05g20580 pycom05g20590 pycom05g20760 pycom05g20800 pycom05g21280 pycom05g21290 pycom05g21820 pycom05g21830 pycom05g22180 pycom05g22190 pycom05g22210 pycom05g22450 pycom05g22460 pycom05g22470 pycom05g22480 pycom05g22490 pycom05g23770 pycom05g23780 pycom05g24050 pycom05g24060 pycom07g03910 pycom10g18700 pycom10g18720 pycom10g18730 pycom10g18740 pycom10g19150 pycom111g01060 pycom12g01660 pycom12g01690 pycom12g01720 pycom12g01740 pycom12g01750 pycom12g01770 pycom12g01810 pycom12g01820 pycom12g01830 pycom12g01840 pycom12g01870 pycom12g01900 pycom17g01060 pycom17g01070
rosa_chinensis RchiOBHm_Chr1g0315041 RchiOBHm_Chr1g0315051 RchiOBHm_Chr1g0315071 RchiOBHm_Chr1g0315161 RchiOBHm_Chr1g0315211 RchiOBHm_Chr1g0315251 RchiOBHm_Chr1g0315321 RchiOBHm_Chr1g0315391 RchiOBHm_Chr1g0315451 RchiOBHm_Chr1g0315481 RchiOBHm_Chr1g0315551 RchiOBHm_Chr1g0315601 RchiOBHm_Chr1g0315621 RchiOBHm_Chr1g0359221 RchiOBHm_Chr2g0142981 RchiOBHm_Chr2g0143001 RchiOBHm_Chr2g0143061 RchiOBHm_Chr2g0143091 RchiOBHm_Chr2g0175321 RchiOBHm_Chr2g0175341 RchiOBHm_Chr2g0175361 RchiOBHm_Chr2g0175371 RchiOBHm_Chr3g0470491 RchiOBHm_Chr3g0480881 RchiOBHm_Chr3g0485511 RchiOBHm_Chr5g0020741 RchiOBHm_Chr5g0020901 RchiOBHm_Chr5g0020931 RchiOBHm_Chr5g0020941 RchiOBHm_Chr5g0020961 RchiOBHm_Chr5g0020971 RchiOBHm_Chr5g0021451 RchiOBHm_Chr5g0021531 RchiOBHm_Chr5g0021831 RchiOBHm_Chr5g0021841 RchiOBHm_Chr5g0021931 RchiOBHm_Chr5g0021941 RchiOBHm_Chr5g0021981 RchiOBHm_Chr5g0021991 RchiOBHm_Chr5g0022011 RchiOBHm_Chr5g0022181 RchiOBHm_Chr5g0022191 RchiOBHm_Chr5g0022211 RchiOBHm_Chr5g0022221 RchiOBHm_Chr5g0022231 RchiOBHm_Chr5g0022291 RchiOBHm_Chr5g0022301 RchiOBHm_Chr5g0022331 RchiOBHm_Chr5g0022361 RchiOBHm_Chr5g0022371 RchiOBHm_Chr5g0022381 RchiOBHm_Chr5g0022401 RchiOBHm_Chr5g0022431 RchiOBHm_Chr5g0022451 RchiOBHm_Chr5g0022541 RchiOBHm_Chr5g0022591 RchiOBHm_Chr5g0022601 RchiOBHm_Chr5g0022701 RchiOBHm_Chr5g0022741 RchiOBHm_Chr5g0022791 RchiOBHm_Chr5g0022811 RchiOBHm_Chr5g0022851 RchiOBHm_Chr5g0029441 RchiOBHm_Chr5g0041631 RchiOBHm_Chr5g0069391 RchiOBHm_Chr6g0273811 RchiOBHm_Chr6g0273831 RchiOBHm_Chr6g0275331 RchiOBHm_Chr7g0219061
rosa_laevigata RLG00000002463 RLG00000020007 RLG00000020008 RLG00000022320 RLG00000022321 RLG00000023446 RLG00000030742 RLG00000030743 RLG00000030747 RLG00000032557 RLG00000032564 RLG00000032571 RLG00000032573 RLG00000032574 RLG00000032612 RLG00000032633 RLG00000032636 RLG00000032638 RLG00000032650 RLG00000032651 RLG00000032652 RLG00000032653 RLG00000032655 RLG00000032673 RLG00000032678 RLG00000032769 RLG00000032857 RLG00000033168 RLG00000033465 RLG00000034086 RLG00000034222 RLG00000035290
rosa_multiflora Rmu_co8143358.1_g000001 Rmu_co8518791.1_g000001 Rmu_sc0000178.1_g000008 Rmu_sc0000178.1_g000014 Rmu_sc0000401.1_g000005 Rmu_sc0000401.1_g000013 Rmu_sc0000401.1_g000017 Rmu_sc0000401.1_g000018 Rmu_sc0000401.1_g000024 Rmu_sc0000401.1_g000025 Rmu_sc0000576.1_g000020 Rmu_sc0001585.1_g000003 Rmu_sc0001585.1_g000005 Rmu_sc0001585.1_g000008 Rmu_sc0001784.1_g000006 Rmu_sc0001784.1_g000011 Rmu_sc0001784.1_g000022 Rmu_sc0001784.1_g000028 Rmu_sc0002052.1_g000004 Rmu_sc0002052.1_g000011 Rmu_sc0002277.1_g000003 Rmu_sc0002277.1_g000006 Rmu_sc0002277.1_g000024 Rmu_sc0002658.1_g000012 Rmu_sc0003512.1_g000004 Rmu_sc0003512.1_g000007 Rmu_sc0004180.1_g000016 Rmu_sc0004180.1_g000029 Rmu_sc0004180.1_g000034 Rmu_sc0005639.1_g000008 Rmu_sc0005639.1_g000023 Rmu_sc0006070.1_g000016 Rmu_sc0006070.1_g000017 Rmu_sc0006966.1_g000021 Rmu_sc0006966.1_g000023 Rmu_sc0007239.1_g000003 Rmu_sc0008460.1_g000010 Rmu_sc0009984.1_g000008 Rmu_sc0010181.1_g000005 Rmu_sc0010181.1_g000010 Rmu_sc0010503.1_g000006 Rmu_sc0011646.1_g000003 Rmu_sc0012984.1_g000011 Rmu_sc0016972.1_g000005 Rmu_sc0016972.1_g000008 Rmu_sc0023070.1_g000003 Rmu_sc0025660.1_g000001 Rmu_ssc0000322.1_g000019
rosa_roxburghii Rroxscaffold_1G00038860 Rroxscaffold_1G00053490 Rroxscaffold_1G00053500 Rroxscaffold_1G00054230 Rroxscaffold_1G00056460 Rroxscaffold_1G00056470 Rroxscaffold_1G00056480 Rroxscaffold_1G00056500 Rroxscaffold_1G00056510 Rroxscaffold_1G00056620 Rroxscaffold_1G00056690 Rroxscaffold_1G00056710 Rroxscaffold_1G00056720 Rroxscaffold_1G00056730 Rroxscaffold_1G00056740 Rroxscaffold_1G00056750 Rroxscaffold_1G00056760 Rroxscaffold_1G00056870 Rroxscaffold_1G00056900 Rroxscaffold_1G00057120 Rroxscaffold_1G00057560 Rroxscaffold_2G00077430 Rroxscaffold_2G00102160 Rroxscaffold_3G00231420 Rroxscaffold_3G00231430 Rroxscaffold_4G00297230 Rroxscaffold_4G00331570 Rroxscaffold_6G00396700 Rroxscaffold_6G00400940 Rroxscaffold_7G00192740
rosa_rugosa Rorug01G0004400 Rorug01G0004500 Rorug02G0377600 Rorug02G0378000 Rorug02G0582800 Rorug02G0583400 Rorug03G0187000 Rorug03G0218800 Rorug04G0081200 Rorug05G0062700 Rorug05G0062700 Rorug05G0063100 Rorug05G0063200 Rorug05G0063200 Rorug05G0063200 Rorug05G0067000 Rorug05G0069700 Rorug05G0069900 Rorug05G0070000 Rorug05G0070100 Rorug05G0070300 Rorug05G0070400 Rorug05G0070600 Rorug05G0070600 Rorug05G0072300 Rorug05G0072400 Rorug05G0072500 Rorug05G0072500 Rorug05G0072600.1 Rorug05G0072700 Rorug05G0072800 Rorug05G0072800 Rorug05G0072900 Rorug05G0073000 Rorug05G0073000 Rorug05G0073400 Rorug05G0073400 Rorug05G0073400 Rorug05G0074800 Rorug05G0075000 Rorug05G0114300 Rorug05G0194200 Rorug06G0097800
rosa_samantha Rh2AG401400 Rh2CG387600 Rh2CG417000 Rh2CG637400 Rh5CG169600 Rh5CG172100 Rh5CG175200 Rh5CG317100 Rh6DG187900
rosa_wichuraiana Rw1G000750 Rw1G000790 Rw1G000820 Rw1G000860 Rw1G000880 Rw1G000910 Rw2G035180 Rw2G035200 Rw2G035240 Rw2G054370 Rw2G054380 Rw5G013570 Rw5G013580 Rw5G013590 Rw5G013910 Rw5G013980 Rw5G014110 Rw5G014120 Rw5G014280 Rw5G014310 Rw5G014400 Rw5G014420 Rw5G014440 Rw5G014460 Rw5G014480 Rw5G014500 Rw5G014520 Rw5G014530 Rw5G042390

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AarI CACCTGC 2 cut(s) 1079, 1112
Acc36I ACCTGC 3 cut(s) 282, 1079, 1112
AccBSI CCGCTC 1 cut(s) 1111
AccII CGCG 8 cut(s) 118, 129, 134, 201, 209, 377, 389, 424
AclWI GGATC 1 cut(s) 701
AcoI YGGCCR 2 cut(s) 160, 468
AcsI RAATTY 1 cut(s) 583
AcuI CTGAAG 1 cut(s) 1151
AcyI GRCGYC 2 cut(s) 39, 411
AfaI GTAC 1 cut(s) 866
AfiI CCNNNNNNNGG 4 cut(s) 128, 133, 252, 318
AgsI TTSAA 1 cut(s) 1123
AluBI AGCT 7 cut(s) 9, 220, 327, 501, 552, 770, 1042
AluI AGCT 7 cut(s) 9, 220, 327, 501, 552, 770, 1042
Alw21I GWGCWC 2 cut(s) 422, 503
Alw44I GTGCAC 1 cut(s) 418
AlwI GGATC 1 cut(s) 701
Ama87I CYCGRG 1 cut(s) 296
AoxI GGCC 5 cut(s) 135, 160, 243, 254, 468
ApaLI GTGCAC 1 cut(s) 418
ApeKI GCWGC 5 cut(s) 90, 217, 292, 379, 996
ApoI RAATTY 1 cut(s) 583
AspLEI GCGC 5 cut(s) 120, 134, 231, 379, 389
AspS9I GGNCC 5 cut(s) 136, 190, 243, 255, 271
AsuC2I CCSGG 2 cut(s) 194, 253
AsuHPI GGTGA 4 cut(s) 655, 668, 694, 917
AsuNHI GCTAGC 1 cut(s) 1139
AvaI CYCGRG 1 cut(s) 296
AvaII GGWCC 2 cut(s) 190, 271
AxyI CCTNAGG 1 cut(s) 342
BaeGI GKGCMC 1 cut(s) 422
BanII GRGCYC 2 cut(s) 309, 503
Bbv12I GWGCWC 2 cut(s) 422, 503
BbvI GCAGC 5 cut(s) 102, 229, 279, 366, 983
BccI CCATC 2 cut(s) 809, 1016
BceAI ACGGC 6 cut(s) 272, 296, 455, 731, 772, 1035
BcgI CGANNNNNNTGC 2 cut(s) 52, 86
BcnI CCSGG 2 cut(s) 194, 253
BfaI CTAG 1 cut(s) 1140
BfmI CTRYAG 1 cut(s) 380
BfoI RGCGCY 1 cut(s) 232
BfuAI ACCTGC 3 cut(s) 282, 1079, 1112
Bme1390I CCNGG 2 cut(s) 194, 253
Bme18I GGWCC 2 cut(s) 190, 271
BmeT110I CYCGRG 1 cut(s) 296
BmgT120I GGNCC 5 cut(s) 136, 190, 243, 255, 271
BmiI GGNNCC 2 cut(s) 348, 1027
BmrFI CCNGG 2 cut(s) 194, 253
BmrI ACTGGG 1 cut(s) 649
BmsI GCATC 5 cut(s) 761, 801, 943, 976, 1008
BmtI GCTAGC 1 cut(s) 1143
BmuI ACTGGG 1 cut(s) 649
BpmI CTGGAG 1 cut(s) 242
BpuMI CCSGG 2 cut(s) 194, 253
Bsa29I ATCGAT 1 cut(s) 849
BsaBI GATNNNNATC 1 cut(s) 698
BsaHI GRCGYC 2 cut(s) 39, 411
BsaJI CCNNGG 3 cut(s) 127, 207, 471
Bsc4I CCNNNNNNNGG 4 cut(s) 128, 133, 252, 318
Bse1I ACTGG 2 cut(s) 644, 695
Bse21I CCTNAGG 1 cut(s) 342
Bse3DI GCAATG 1 cut(s) 795
Bse8I GATNNNNATC 1 cut(s) 698
BseCI ATCGAT 1 cut(s) 849
BseDI CCNNGG 3 cut(s) 127, 207, 471
BseGI GGATG 4 cut(s) 102, 724, 752, 991
BseJI GATNNNNATC 1 cut(s) 698
BseLI CCNNNNNNNGG 4 cut(s) 128, 133, 252, 318
BseMI GCAATG 1 cut(s) 795
BseMII CTCAG 4 cut(s) 73, 333, 344, 503
BseNI ACTGG 2 cut(s) 644, 695
BseRI GAGGAG 2 cut(s) 74, 239
BseSI GKGCMC 1 cut(s) 422
BseX3I CGGCCG 1 cut(s) 160
BseXI GCAGC 5 cut(s) 102, 229, 279, 366, 983
BsgI GTGCAG 1 cut(s) 1051
Bsh1236I CGCG 8 cut(s) 118, 129, 134, 201, 209, 377, 389, 424
Bsh1285I CGRYCG 2 cut(s) 163, 672
BshFI GGCC 5 cut(s) 137, 162, 245, 256, 470
BshVI ATCGAT 1 cut(s) 849
BsiEI CGRYCG 2 cut(s) 163, 672
BsiHKAI GWGCWC 2 cut(s) 422, 503
BsiHKCI CYCGRG 1 cut(s) 296
BsiSI CCGG 2 cut(s) 193, 253
BslI CCNNNNNNNGG 4 cut(s) 128, 133, 252, 318
BsmI GAATGC 1 cut(s) 998
BsnI GGCC 5 cut(s) 137, 162, 245, 256, 470
BsoBI CYCGRG 1 cut(s) 296
Bsp1286I GDGCHC 3 cut(s) 309, 422, 503
Bsp143I GATC 5 cut(s) 693, 820, 846, 850, 1092
Bsp68I TCGCGA 1 cut(s) 201
BspANI GGCC 5 cut(s) 137, 162, 245, 256, 470
BspCNI CTCAG 4 cut(s) 72, 334, 345, 502
BspDI ATCGAT 1 cut(s) 849
BspFNI CGCG 8 cut(s) 118, 129, 134, 201, 209, 377, 389, 424
BspLI GGNNCC 2 cut(s) 348, 1027
BspMAI CTGCAG 1 cut(s) 384
BspMI ACCTGC 3 cut(s) 282, 1079, 1112
BspOI GCTAGC 1 cut(s) 1143
BspPI GGATC 1 cut(s) 701
BspQI GCTCTTC 1 cut(s) 508
BsrBI CCGCTC 1 cut(s) 1111
BsrDI GCAATG 1 cut(s) 795
BsrI ACTGG 2 cut(s) 644, 695
BssECI CCNNGG 3 cut(s) 127, 207, 471
BssMI GATC 5 cut(s) 693, 820, 846, 850, 1092
BssNI GRCGYC 2 cut(s) 39, 411
Bst6I CTCTTC 3 cut(s) 508, 837, 1152
BstACI GRCGYC 2 cut(s) 39, 411
BstC8I GCNNGC 8 cut(s) 110, 139, 157, 309, 422, 652, 1109, 1141
BstDEI CTNAG 5 cut(s) 59, 342, 353, 489, 837
BstDSI CCRYGG 3 cut(s) 127, 207, 471
BstF5I GGATG 4 cut(s) 102, 724, 752, 991
BstFNI CGCG 8 cut(s) 118, 129, 134, 201, 209, 377, 389, 424
BstH2I RGCGCY 1 cut(s) 232
BstHHI GCGC 5 cut(s) 120, 134, 231, 379, 389
BstKTI GATC 5 cut(s) 696, 823, 849, 853, 1095
BstMBI GATC 5 cut(s) 693, 820, 846, 850, 1092
BstMCI CGRYCG 2 cut(s) 163, 672
BstNSI RCATGY 1 cut(s) 971
BstSCI CCNGG 2 cut(s) 192, 251
BstSFI CTRYAG 1 cut(s) 380
BstSLI GKGCMC 1 cut(s) 422
BstUI CGCG 8 cut(s) 118, 129, 134, 201, 209, 377, 389, 424
BstV1I GCAGC 5 cut(s) 102, 229, 279, 366, 983
BstZI CGGCCG 1 cut(s) 160
Bsu15I ATCGAT 1 cut(s) 849
Bsu36I CCTNAGG 1 cut(s) 342
BsuRI GGCC 5 cut(s) 137, 162, 245, 256, 470
BsuTUI ATCGAT 1 cut(s) 849
BtgI CCRYGG 3 cut(s) 127, 207, 471
BtsCI GGATG 4 cut(s) 102, 724, 752, 991
BtsI GCAGTG 3 cut(s) 389, 1063, 1159
BtsIMutI CAGTG 5 cut(s) 389, 497, 948, 1063, 1159
BtuMI TCGCGA 1 cut(s) 201
BveI ACCTGC 3 cut(s) 282, 1079, 1112
Cac8I GCNNGC 8 cut(s) 110, 139, 157, 309, 422, 652, 1109, 1141
CciNI GCGGCCGC 1 cut(s) 160
CfoI GCGC 5 cut(s) 120, 134, 231, 379, 389
Cfr13I GGNCC 5 cut(s) 136, 190, 243, 255, 271
Cfr42I CCGCGG 2 cut(s) 130, 210
ClaI ATCGAT 1 cut(s) 849
CpoI CGGWCCG 1 cut(s) 190
CseI GACGC 2 cut(s) 47, 400
Csp6I GTAC 1 cut(s) 865
CspI CGGWCCG 1 cut(s) 190
CviAII CATG 2 cut(s) 169, 968
CviQI GTAC 1 cut(s) 865
DdeI CTNAG 5 cut(s) 59, 342, 353, 489, 837
DpnI GATC 5 cut(s) 695, 822, 848, 852, 1094
DpnII GATC 5 cut(s) 693, 820, 846, 850, 1092
EaeI YGGCCR 2 cut(s) 160, 468
EagI CGGCCG 1 cut(s) 160
Eam1104I CTCTTC 3 cut(s) 508, 837, 1152
EarI CTCTTC 3 cut(s) 508, 837, 1152
EciI GGCGGA 3 cut(s) 95, 137, 227
Ecl136II GAGCTC 1 cut(s) 501
EclXI CGGCCG 1 cut(s) 160
Eco24I GRGCYC 2 cut(s) 309, 503
Eco32I GATATC 1 cut(s) 882
Eco47I GGWCC 2 cut(s) 190, 271
Eco52I CGGCCG 1 cut(s) 160
Eco53kI GAGCTC 1 cut(s) 501
Eco57I CTGAAG 1 cut(s) 1151
Eco81I CCTNAGG 1 cut(s) 342
Eco88I CYCGRG 1 cut(s) 296
EcoICRI GAGCTC 1 cut(s) 501
EcoRV GATATC 1 cut(s) 882
EcoT38I GRGCYC 2 cut(s) 309, 503
FaeI CATG 2 cut(s) 172, 971
FatI CATG 2 cut(s) 168, 967
FauI CCCGC 4 cut(s) 146, 423, 456, 1116
FauNDI CATATG 1 cut(s) 396
FokI GGATG 4 cut(s) 89, 731, 739, 998
FriOI GRGCYC 2 cut(s) 309, 503
FspBI CTAG 1 cut(s) 1140
GlaI GCGC 5 cut(s) 119, 133, 230, 378, 388
GsuI CTGGAG 1 cut(s) 242
HaeII RGCGCY 1 cut(s) 232
HaeIII GGCC 5 cut(s) 137, 162, 245, 256, 470
HapII CCGG 2 cut(s) 193, 253
HgaI GACGC 2 cut(s) 47, 400
HhaI GCGC 5 cut(s) 120, 134, 231, 379, 389
Hin1I GRCGYC 2 cut(s) 39, 411
Hin1II CATG 2 cut(s) 172, 971
Hin6I GCGC 5 cut(s) 118, 132, 229, 377, 387
HinP1I GCGC 5 cut(s) 118, 132, 229, 377, 387
HinfI GANTC 6 cut(s) 203, 484, 590, 625, 674, 917
HpaII CCGG 2 cut(s) 193, 253
HphI GGTGA 4 cut(s) 655, 668, 694, 917
Hpy166II GTNNAC 1 cut(s) 420
Hpy188I TCNGA 4 cut(s) 37, 354, 886, 1131
Hpy188III TCNNGA 5 cut(s) 179, 200, 298, 814, 824
Hpy8I GTNNAC 1 cut(s) 420
Hpy99I CGWCG 3 cut(s) 41, 52, 416
HpyAV CCTTC 4 cut(s) 36, 195, 473, 821
HpyF3I CTNAG 5 cut(s) 59, 342, 353, 489, 837
Hsp92I GRCGYC 2 cut(s) 39, 411
Hsp92II CATG 2 cut(s) 172, 971
HspAI GCGC 5 cut(s) 118, 132, 229, 377, 387
KspI CCGCGG 2 cut(s) 130, 210
Kzo9I GATC 5 cut(s) 693, 820, 846, 850, 1092
LguI GCTCTTC 1 cut(s) 508
LmnI GCTCC 4 cut(s) 214, 226, 544, 830
Lsp1109I GCAGC 5 cut(s) 102, 229, 279, 366, 983
LweI GCATC 5 cut(s) 761, 801, 943, 976, 1008
MaeI CTAG 1 cut(s) 1140
MaeIII GTNAC 4 cut(s) 643, 814, 944, 1086
MalI GATC 5 cut(s) 695, 822, 848, 852, 1094
MbiI CCGCTC 1 cut(s) 1111
MboI GATC 5 cut(s) 693, 820, 846, 850, 1092
MboII GAAGA 3 cut(s) 495, 542, 854
MhlI GDGCHC 3 cut(s) 309, 422, 503
MluCI AATT 2 cut(s) 583, 683
MlyI GAGTC 5 cut(s) 212, 493, 599, 668, 911
MmeI TCCRAC 1 cut(s) 60
MseI TTAA 1 cut(s) 900
MslI CAYNNNNRTG 1 cut(s) 263
MspA1I CMGCKG 4 cut(s) 129, 159, 209, 220
MspI CCGG 2 cut(s) 193, 253
MspR9I CCNGG 2 cut(s) 194, 253
Mva1269I GAATGC 1 cut(s) 998
MvnI CGCG 8 cut(s) 118, 129, 134, 201, 209, 377, 389, 424
NciI CCSGG 2 cut(s) 194, 253
NdeI CATATG 1 cut(s) 396
NdeII GATC 5 cut(s) 693, 820, 846, 850, 1092
NheI GCTAGC 1 cut(s) 1139
NlaIII CATG 2 cut(s) 172, 971
NlaIV GGNNCC 2 cut(s) 348, 1027
NmeAIII GCCGAG 1 cut(s) 176
NmuCI GTSAC 3 cut(s) 643, 814, 944
NotI GCGGCCGC 1 cut(s) 160
NruI TCGCGA 1 cut(s) 201
NspI RCATGY 1 cut(s) 971
PaqCI CACCTGC 2 cut(s) 1079, 1112
PciSI GCTCTTC 1 cut(s) 508
PcsI WCGNNNNNNNCGW 1 cut(s) 608
PctI GAATGC 1 cut(s) 998
PfeI GAWTC 1 cut(s) 625
PleI GAGTC 5 cut(s) 211, 492, 598, 668, 911
PpsI GAGTC 5 cut(s) 211, 492, 598, 668, 911
Psp124BI GAGCTC 1 cut(s) 503
PspN4I GGNNCC 2 cut(s) 348, 1027
PspPI GGNCC 5 cut(s) 136, 190, 243, 255, 271
PstI CTGCAG 1 cut(s) 384
PvuII CAGCTG 1 cut(s) 220
RruI TCGCGA 1 cut(s) 201
RsaI GTAC 1 cut(s) 866
RsaNI GTAC 1 cut(s) 865
RseI CAYNNNNRTG 1 cut(s) 263
Rsr2I CGGWCCG 1 cut(s) 190
RsrII CGGWCCG 1 cut(s) 190
SacI GAGCTC 1 cut(s) 503
SacII CCGCGG 2 cut(s) 130, 210
SapI GCTCTTC 1 cut(s) 508
SaqAI TTAA 1 cut(s) 900
Sau3AI GATC 5 cut(s) 693, 820, 846, 850, 1092
Sau96I GGNCC 5 cut(s) 136, 190, 243, 255, 271
SchI GAGTC 5 cut(s) 212, 493, 599, 668, 911
ScrFI CCNGG 2 cut(s) 194, 253
SduI GDGCHC 3 cut(s) 309, 422, 503
SfaNI GCATC 5 cut(s) 761, 801, 943, 976, 1008
SfcI CTRYAG 1 cut(s) 380
Sfr303I CCGCGG 2 cut(s) 130, 210
SgrBI CCGCGG 2 cut(s) 130, 210
SinI GGWCC 2 cut(s) 190, 271
SmiMI CAYNNNNRTG 1 cut(s) 263
Sse9I AATT 2 cut(s) 583, 683
SspMI CTAG 1 cut(s) 1140
SstI GAGCTC 1 cut(s) 503
StyD4I CCNGG 2 cut(s) 192, 251
TaqI TCGA 3 cut(s) 178, 414, 849
TaqII GACCGA 3 cut(s) 178, 686, 953
TasI AATT 2 cut(s) 583, 683
TatI WGTACW 1 cut(s) 864
TfiI GAWTC 1 cut(s) 625
Tru1I TTAA 1 cut(s) 900
Tru9I TTAA 1 cut(s) 900
TscAI CASTG 5 cut(s) 389, 497, 955, 1070, 1159
TseFI GTSAC 3 cut(s) 643, 814, 944
TseI GCWGC 5 cut(s) 90, 217, 292, 379, 996
Tsp45I GTSAC 3 cut(s) 643, 814, 944
TspGWI ACGGA 1 cut(s) 977
TspRI CASTG 5 cut(s) 389, 497, 955, 1070, 1159
VneI GTGCAC 1 cut(s) 418
VpaK11BI GGWCC 2 cut(s) 190, 271
XapI RAATTY 1 cut(s) 583
XceI RCATGY 1 cut(s) 971
XcmI CCANNNNNNNNNTGG 2 cut(s) 265, 920
XspI CTAG 1 cut(s) 1140
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.