Basic Information

Type: gene

Biological Identity

Species

rosa_chinensis

Chromosome

Orthogroup ID

OG0000048

Physical Location & Seq

Genomic Coordinates Forward (+)

14991367 .. 14996663

Gene Structure 5297 bp

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UTR

Exon/CDS

Intron

Transcript / Protein ID

PRQ30081

Sequence Viewer

CDS Protein Promoter (2k)

Length: 3564 bp

ATGAATCCATCACTGCTAGAGTTACATATGTCCAATTGCCAAATTGAAAGTCTTCCACTCTCACTGCACACAGTTAATTTCACTTCGCTTTCAGTCCTTGATATGTCACGTAATGTTATTAGTTCTTCATTCCTCAGGGTTTTTAATCTTACCAGTCTCGAAACTCTCGATCTAAGCTATAACTCTTTCATCGGTACCTTTCCCAAACTCTTTGGAAATTTGTGCAGCCTAAATACAATAAATATCAAGTACAACAACTTTGATGGGGGTATTCAAGAGGTGGAAGGCGAATTGCCTGCCTCCTTAGGAATGCTGCACAACTTGCAGTATCTTGATCTCAGTGGCAGCTCTATCGGAGGCTCAATTTCAGAGTTTGGAAGCATTCCCTTCAAGATTGGAATCAACTCTTGGACCTACTTGTCTCACTTGAACTTGTCGTATGACAACTTGGCCGGAAGGATTCCTTCGAGTGATCAACTGCAGACACTTGAGGATTCATCTATTTACAAGGGCAATCCATCACTTTGTGGGGTTCCTCTTTTAACCAAGTGCCCAGGAGACGACACACCTATAGCACAAACTTTCCTGGAGAAGACAATAAAGATGAGATTGATAACGGAAAGCTTGGTTTCTATGAGGCATTTCGAATTTCAGGGACTTCCAAGAAGTGAGAAATGCTTTGAGGAAGAGAGACAAGCACTTCTCTCTTTCAAGCACCATCTTACTGATCCTGCTGGTAAGATTTCTTCTTGGGTGGGACATGATTGCTGTCAATGGATTGGGATTTCATGCAACAACCTCACCGGTCATGTTGCTAGGATGGACCTCCGAAACACAATTACATATCCCCTTTTTGATGAAAAGACGGGATTGTTGACTTACCGACGGTCTTGCTTGGCAGGTAAGTTAAATCCTTCTTTGCTTAGCTTGAAGCATTTGTATTACCTAGACCTAGGTTGGAATTGTTTCAAAGAGATTCCAAAGTTCATTGGGCAGCTTAAAAGTTTGAGGTATCTCAGTCTATCCTCTGCATCATTTGGGGGTGAGATTCCTTCTTCACTTGGTAACCTGTCAAACTTGAATTACCTTGACCTTAGTTGTGAGCACCCCTCATGCCCTTCATATTCGAAAAACTTGAATTGGCTTTCTCATCTCCCTTCCCTCAAATATCTCGACCTTGGAGGAGCAAATCTTAGTAACAATGCATTAAATTGGCTACATGATGTTAACATGCTTCCTTCATTGTTAGAGTTGCATTTATCTGCATGCAGCATTAAAGAAAATCTTCCCATCTCACTTGAGACGGTCAACTTCACATCCCTTTTGGTCCTTGATATGTCAGGTAATCACATCAATTCTTCATTTCCCAGCTGGCTTTTTAATCTTTCGAGCCTTAGAAAACTTGATCTGAGTCGAAATTCTTTCAATGCTCCCATTCCTTTGGAATTTGCAAGCCTAAAAAGTCTAGAAGATCTCGATTTATTTGATACTGGCCTCCAGGGTCAAATTCCCAAGCTCTTCGGAAATTTGTGCAGACTAAAGAAATTACATCTTAGGTTAAACTACCTTGAGGGGGGAGTCAAAGAGGTTTTGAATGGTTTCTCAGATTGTAAAAATGCTAGTTTAGAGTCACTAGATTTGTCTGGTAATATGCTGGAAAGCGAATTACCCTCTTCGCTGGGAATGCTAAAAAATCTGCAGCATCTTGACCTCTACCAGAACTATTTTTGGGGCTCAATTCCAGAATCCATTGGAAATTTATCAACCTTGAAAACACTGGACCTCTCTTTGAATCGTATGAACGGGTCAATACCAGCAAGTTTTGGACAACTCTCTCAGCTAGTTGACCTTGATCTGTCTTATAATTCATGGGAAGGCACCTTAACTGAAGCTCATCTCATAAACTTGACAAGGTTGGAGTCTTTTGCATTGAGCACAGACCGTCCCATGCCCCTCATTTTTAGTGTGACTAATTATAAGTGGGTTCCTCCTTTCAAGCTCCACAAAATTGAGATCTACAATTGCCAAATAGGTCCTGCCTTTCCCATATGGCTACAATCTCAAACTCAACTCTCATATGTGATCCTTAGTCATACTGGAATCTTGGATTCCATATCGCAGGAGTGGTTCTTGAAAATTTCTTCCCAAGTTGAAGTTTTGGATTTATCTTACAATCAGATTCCTGGAAAGCTACCATTCCAATCCAAATTTCCAAAGTTGATTTTAATAAATCTGAGTAATAATCAATTTGATGGCCCTCTTCAGCTTTTGTCCACCAATGCATCTTTGGATAGTCTTCATGATAGTTCACTTTCCCAGCCTATTCCCTTGGATTTTGGAGAACTGTTGCCCAAGTTACAGAGTCTGTATCTTTTTAACAATAATTTGAAAGGTACCATTCCACCCTCTATTTGTAGCATAAAAGGTATGTACATCCTTTCACTAAGAAACAATAAGTTATCTGGAGAGTTTCCTCAAGCATGGGGTCTGTGGAAAGAAATAAATGTTGTAGATGTAGCATACAACAATCTCTCTGGTAATATTCCGAGCTCAATGGGTATCCCAAGGACTCTTGTTGTATTGAAGATGAACAACAATAATTTTGGTGGCAAAATTCCTTCTTCCTTGCATAATTGTTCTAAGTTGAGCAGACTTGATCTTGGAGGCAACAAATTCACTGGAATATTGCCTTTGTGGATAGGATCAAAGCTGGCCGAATTGCAAATGCTACAATTGCGATCAAACTTCTTAAGTGGACACATCCCTCAACAATTGTGCAATCTTTCCTACCTCCACATCCTAGACCTTGCTCACAACAACTTTTCTGGGACCATTCCCAAGTGTTTTAATGGTATGACTTCTCTAGTCAATGAAGATGGCTATTTATTGGGAGCCTATATTTATGAGGAAACAACAGTAATATTGAAAGGAAGAGAATTCAAATATAGTGACATGATTATGGAATATGTAAAGAGCATTGATCTTTCATCAAATAATTTAGAAGGTGAAATCCCGGAAGAAATATGCAGTCTCATTGAGTTGGGTACCCTGAACTTGTCAAGGAATCAATTAAGTGGAAACATTCCCTCTAAGATTGGGAATCTATCTTGGTTAGAGACCCTTGATCTTTCACACAACCACCTCATGGGAGAGATTCCTCAAAGCTTTTCTTCGTTGACCTTCTTGTCTTACTTGAACTTGTCTTACAATAACTTGACTGGAAGAATTCCTTTGGGCAATCAACTCCTGACGCTTGATGATCCATCTATTTACGAGGGCAATCCATCACTGTGCGGGTTTCCTCTTTCAACAGATTGCCTGGGAGATGAGATACCTGAAGAACAATTTTCTTCTGGAGGAGGCAATAAAGATGAAGATAACAATTCAAAGCTTGGTTTCTATGTTAGCATAATTCTCGGGTTTGTCGTAGGCTTTTGGGGTGTTTGTGGCACATTACTGATAAAGAAGTCATGGAGGTATGCATATTTTCGGTTCTTTGACAACATCAAAGACAGAGTAGCTAGCAGTTGCAATGGAAGTGCATGGTTTGCAAAGGAAACTTGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0000003 GO:0003006 GO:0005575 GO:0005618 GO:0005623 GO:0007275 GO:0007389 GO:0008150 GO:0009505 GO:0009531 GO:0009553 GO:0009653 GO:0009790 GO:0009791 GO:0009793 GO:0009798 GO:0009888 GO:0010154 GO:0010453 GO:0022414 GO:0022603 GO:0030312 GO:0032501 GO:0032502 GO:0042659 GO:0044426 GO:0044462 GO:0044464 GO:0045595 GO:0048226 GO:0048229 GO:0048316 GO:0048608 GO:0048731 GO:0048856 GO:0050789 GO:0050793 GO:0050794 GO:0051239 GO:0051302 GO:0061458 GO:0065001 GO:0065007 GO:0071944 GO:0090558 GO:0090708 GO:0099402 GO:1905392 GO:1905421 GO:2000026 GO:2000067 GO:2000280

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

LRRNT_2 LRR_1 LRR_4 LRR_6 LRR_8

Protein Analysis

1187

Amino Acids

132.24

Weight (kDa)

5.65

Isoelectric Point (pI)

39.24

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
LRR_14	PF23598	5 - 118	3.7e-06	Leucine-rich repeat region
LRRNT_2	PF08263	229 - 265	3e-12	Leucine rich repeat N-terminal domain
LRR_14	PF23598	307 - 422	3.6e-10	Leucine-rich repeat region
LRR_Zer-1	PF25013	307 - 402	9.5e-06	Zer-1-like, Leucine-rich repeats
LRR_14	PF23598	380 - 523	9.2e-08	Leucine-rich repeat region
LRR_8	PF13855	440 - 497	7.9e-07	Leucine rich repeat
LRR_14	PF23598	541 - 695	1.5e-13	Leucine-rich repeat region
LRR_8	PF13855	565 - 622	1.6e-07	Leucine rich repeat
LRR_14	PF23598	999 - 1070	8.9e-08	Leucine-rich repeat region
LRR_8	PF13855	1014 - 1072	3.3e-06	Leucine rich repeat

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

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Publication-ready

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Orthologous Genes (Group: OG0000048)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT2G34930
fragaria_vesca	FvH4_3g12670 FvH4_3g12672 FvH4_3g12740 FvH4_3g12742 FvH4_3g12770 FvH4_3g12770 FvH4_3g12860 FvH4_3g12890 FvH4_3g13431 FvH4_3g13433 FvH4_3g13435 FvH4_3g13470 FvH4_3g13470 FvH4_3g13480 FvH4_3g13562 FvH4_3g13580 FvH4_3g13600 FvH4_3g13600 FvH4_3g13600 FvH4_3g13600 FvH4_3g13600 FvH4_3g13600 FvH4_3g13610 FvH4_3g13620 FvH4_3g13620 FvH4_3g23240 FvH4_3g32910 FvH4_3g35070 FvH4_3g45520 FvH4_5g08430 FvH4_5g08450 FvH4_6g53230 FvH4_6g53300
malus_domestica	MD05G1217600.v1.1 MD05G1217700.v1.1 MD05G1224700.v1.1 MD05G1225100.v1.1 MD05G1225300.v1.1 MD05G1225400.v1.1 MD05G1235900.v1.1 MD05G1236100.v1.1 MD05G1236300.v1.1 MD05G1237200.v1.1 MD05G1241600.v1.1 MD05G1245700.v1.1 MD05G1245800.v1.1 MD05G1245900.v1.1 MD05G1246000.v1.1 MD05G1246100.v1.1 MD05G1246300.v1.1 MD05G1246400.v1.1 MD05G1246500.v1.1 MD05G1248100.v1.1 MD05G1248200.v1.1 MD05G1264300.v1.1 MD05G1275900.v1.1 MD07G1051400.v1.1 MD09G1012600.v1.1 MD09G1012700.v1.1 MD09G1012800.v1.1 MD10G1221400.v1.1 MD10G1221500.v1.1 MD10G1221600.v1.1 MD10G1221900.v1.1 MD10G1222200.v1.1 MD10G1222400.v1.1 MD10G1222500.v1.1 MD10G1222900.v1.1 MD10G1223000.v1.1 MD10G1223100.v1.1 MD10G1223500.v1.1 MD10G1228000.v1.1 MD12G1019600.v1.1 MD12G1020000.v1.1 MD12G1020100.v1.1 MD17G1013200.v1.1 MD17G1013300.v1.1 MD17G1013400.v1.1
prunus_persica	Prupe.1G060500_v2.0.a1 Prupe.1G100100_v2.0.a1 Prupe.3G124000_v2.0.a1 Prupe.3G304400_v2.0.a1 Prupe.4G116800_v2.0.a1 Prupe.4G116900_v2.0.a1 Prupe.4G117000_v2.0.a1 Prupe.4G121800_v2.0.a1 Prupe.4G121900_v2.0.a1 Prupe.4G122000_v2.0.a1 Prupe.4G122100_v2.0.a1 Prupe.4G122200_v2.0.a1 Prupe.4G122300_v2.0.a1 Prupe.4G122500_v2.0.a1 Prupe.4G122600_v2.0.a1 Prupe.4G122800_v2.0.a1 Prupe.4G122900_v2.0.a1 Prupe.4G123000_v2.0.a1 Prupe.4G123100_v2.0.a1 Prupe.4G123200_v2.0.a1 Prupe.4G131500_v2.0.a1 Prupe.4G131600_v2.0.a1 Prupe.7G032500_v2.0.a1 Prupe.7G032900_v2.0.a1 Prupe.7G033000_v2.0.a1 Prupe.7G033100_v2.0.a1 Prupe.7G033300_v2.0.a1 Prupe.7G033600_v2.0.a1 Prupe.7G034600_v2.0.a1 Prupe.7G040200_v2.0.a1 Prupe.7G059200_v2.0.a1
pyrus_communis	pycom05g20580 pycom05g20590 pycom05g20760 pycom05g20800 pycom05g21280 pycom05g21290 pycom05g21820 pycom05g21830 pycom05g22180 pycom05g22190 pycom05g22210 pycom05g22450 pycom05g22460 pycom05g22470 pycom05g22480 pycom05g22490 pycom05g23770 pycom05g23780 pycom05g24050 pycom05g24060 pycom07g03910 pycom10g18700 pycom10g18720 pycom10g18730 pycom10g18740 pycom10g19150 pycom111g01060 pycom12g01660 pycom12g01690 pycom12g01720 pycom12g01740 pycom12g01750 pycom12g01770 pycom12g01810 pycom12g01820 pycom12g01830 pycom12g01840 pycom12g01870 pycom12g01900 pycom17g01060 pycom17g01070
rosa_chinensis	RchiOBHm_Chr1g0315041 RchiOBHm_Chr1g0315051 RchiOBHm_Chr1g0315071 RchiOBHm_Chr1g0315161 RchiOBHm_Chr1g0315211 RchiOBHm_Chr1g0315251 RchiOBHm_Chr1g0315321 RchiOBHm_Chr1g0315391 RchiOBHm_Chr1g0315451 RchiOBHm_Chr1g0315481 RchiOBHm_Chr1g0315551 RchiOBHm_Chr1g0315601 RchiOBHm_Chr1g0315621 RchiOBHm_Chr1g0359221 RchiOBHm_Chr2g0142981 RchiOBHm_Chr2g0143001 RchiOBHm_Chr2g0143061 RchiOBHm_Chr2g0143091 RchiOBHm_Chr2g0175321 RchiOBHm_Chr2g0175341 RchiOBHm_Chr2g0175361 RchiOBHm_Chr2g0175371 RchiOBHm_Chr3g0470491 RchiOBHm_Chr3g0480881 RchiOBHm_Chr3g0485511 RchiOBHm_Chr5g0020741 RchiOBHm_Chr5g0020901 RchiOBHm_Chr5g0020931 RchiOBHm_Chr5g0020941 RchiOBHm_Chr5g0020961 RchiOBHm_Chr5g0020971 RchiOBHm_Chr5g0021451 RchiOBHm_Chr5g0021531 RchiOBHm_Chr5g0021831 RchiOBHm_Chr5g0021841 RchiOBHm_Chr5g0021931 RchiOBHm_Chr5g0021941 RchiOBHm_Chr5g0021981 RchiOBHm_Chr5g0021991 RchiOBHm_Chr5g0022011 RchiOBHm_Chr5g0022181 RchiOBHm_Chr5g0022191 RchiOBHm_Chr5g0022211 RchiOBHm_Chr5g0022221 RchiOBHm_Chr5g0022231 RchiOBHm_Chr5g0022291 RchiOBHm_Chr5g0022301 RchiOBHm_Chr5g0022331 RchiOBHm_Chr5g0022361 RchiOBHm_Chr5g0022371 RchiOBHm_Chr5g0022381 RchiOBHm_Chr5g0022401 RchiOBHm_Chr5g0022431 RchiOBHm_Chr5g0022451 RchiOBHm_Chr5g0022541 RchiOBHm_Chr5g0022591 RchiOBHm_Chr5g0022601 RchiOBHm_Chr5g0022701 RchiOBHm_Chr5g0022741 RchiOBHm_Chr5g0022791 RchiOBHm_Chr5g0022811 RchiOBHm_Chr5g0022851 RchiOBHm_Chr5g0029441 RchiOBHm_Chr5g0041631 RchiOBHm_Chr5g0069391 RchiOBHm_Chr6g0273811 RchiOBHm_Chr6g0273831 RchiOBHm_Chr6g0275331 RchiOBHm_Chr7g0219061
rosa_laevigata	RLG00000002463 RLG00000020007 RLG00000020008 RLG00000022320 RLG00000022321 RLG00000023446 RLG00000030742 RLG00000030743 RLG00000030747 RLG00000032557 RLG00000032564 RLG00000032571 RLG00000032573 RLG00000032574 RLG00000032612 RLG00000032633 RLG00000032636 RLG00000032638 RLG00000032650 RLG00000032651 RLG00000032652 RLG00000032653 RLG00000032655 RLG00000032673 RLG00000032678 RLG00000032769 RLG00000032857 RLG00000033168 RLG00000033465 RLG00000034086 RLG00000034222 RLG00000035290
rosa_multiflora	Rmu_co8143358.1_g000001 Rmu_co8518791.1_g000001 Rmu_sc0000178.1_g000008 Rmu_sc0000178.1_g000014 Rmu_sc0000401.1_g000005 Rmu_sc0000401.1_g000013 Rmu_sc0000401.1_g000017 Rmu_sc0000401.1_g000018 Rmu_sc0000401.1_g000024 Rmu_sc0000401.1_g000025 Rmu_sc0000576.1_g000020 Rmu_sc0001585.1_g000003 Rmu_sc0001585.1_g000005 Rmu_sc0001585.1_g000008 Rmu_sc0001784.1_g000006 Rmu_sc0001784.1_g000011 Rmu_sc0001784.1_g000022 Rmu_sc0001784.1_g000028 Rmu_sc0002052.1_g000004 Rmu_sc0002052.1_g000011 Rmu_sc0002277.1_g000003 Rmu_sc0002277.1_g000006 Rmu_sc0002277.1_g000024 Rmu_sc0002658.1_g000012 Rmu_sc0003512.1_g000004 Rmu_sc0003512.1_g000007 Rmu_sc0004180.1_g000016 Rmu_sc0004180.1_g000029 Rmu_sc0004180.1_g000034 Rmu_sc0005639.1_g000008 Rmu_sc0005639.1_g000023 Rmu_sc0006070.1_g000016 Rmu_sc0006070.1_g000017 Rmu_sc0006966.1_g000021 Rmu_sc0006966.1_g000023 Rmu_sc0007239.1_g000003 Rmu_sc0008460.1_g000010 Rmu_sc0009984.1_g000008 Rmu_sc0010181.1_g000005 Rmu_sc0010181.1_g000010 Rmu_sc0010503.1_g000006 Rmu_sc0011646.1_g000003 Rmu_sc0012984.1_g000011 Rmu_sc0016972.1_g000005 Rmu_sc0016972.1_g000008 Rmu_sc0023070.1_g000003 Rmu_sc0025660.1_g000001 Rmu_ssc0000322.1_g000019
rosa_roxburghii	Rroxscaffold_1G00038860 Rroxscaffold_1G00053490 Rroxscaffold_1G00053500 Rroxscaffold_1G00054230 Rroxscaffold_1G00056460 Rroxscaffold_1G00056470 Rroxscaffold_1G00056480 Rroxscaffold_1G00056500 Rroxscaffold_1G00056510 Rroxscaffold_1G00056620 Rroxscaffold_1G00056690 Rroxscaffold_1G00056710 Rroxscaffold_1G00056720 Rroxscaffold_1G00056730 Rroxscaffold_1G00056740 Rroxscaffold_1G00056750 Rroxscaffold_1G00056760 Rroxscaffold_1G00056870 Rroxscaffold_1G00056900 Rroxscaffold_1G00057120 Rroxscaffold_1G00057560 Rroxscaffold_2G00077430 Rroxscaffold_2G00102160 Rroxscaffold_3G00231420 Rroxscaffold_3G00231430 Rroxscaffold_4G00297230 Rroxscaffold_4G00331570 Rroxscaffold_6G00396700 Rroxscaffold_6G00400940 Rroxscaffold_7G00192740
rosa_rugosa	Rorug01G0004400 Rorug01G0004500 Rorug02G0377600 Rorug02G0378000 Rorug02G0582800 Rorug02G0583400 Rorug03G0187000 Rorug03G0218800 Rorug04G0081200 Rorug05G0062700 Rorug05G0062700 Rorug05G0063100 Rorug05G0063200 Rorug05G0063200 Rorug05G0063200 Rorug05G0067000 Rorug05G0069700 Rorug05G0069900 Rorug05G0070000 Rorug05G0070100 Rorug05G0070300 Rorug05G0070400 Rorug05G0070600 Rorug05G0070600 Rorug05G0072300 Rorug05G0072400 Rorug05G0072500 Rorug05G0072500 Rorug05G0072600.1 Rorug05G0072700 Rorug05G0072800 Rorug05G0072800 Rorug05G0072900 Rorug05G0073000 Rorug05G0073000 Rorug05G0073400 Rorug05G0073400 Rorug05G0073400 Rorug05G0074800 Rorug05G0075000 Rorug05G0114300 Rorug05G0194200 Rorug06G0097800
rosa_samantha	Rh2AG401400 Rh2CG387600 Rh2CG417000 Rh2CG637400 Rh5CG169600 Rh5CG172100 Rh5CG175200 Rh5CG317100 Rh6DG187900
rosa_wichuraiana	Rw1G000750 Rw1G000790 Rw1G000820 Rw1G000860 Rw1G000880 Rw1G000910 Rw2G035180 Rw2G035200 Rw2G035240 Rw2G054370 Rw2G054380 Rw5G013570 Rw5G013580 Rw5G013590 Rw5G013910 Rw5G013980 Rw5G014110 Rw5G014120 Rw5G014280 Rw5G014310 Rw5G014400 Rw5G014420 Rw5G014440 Rw5G014460 Rw5G014480 Rw5G014500 Rw5G014520 Rw5G014530 Rw5G042390

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AanI	TTATAA	2 cut(s)	1863, 1977
AasI	GACNNNNNNGTC	2 cut(s)	418, 3184
Acc36I	ACCTGC	1 cut(s)	890
Acc65I	GGTACC	3 cut(s)	194, 2393, 3044
AccB1I	GGYRCC	4 cut(s)	194, 1877, 2393, 3044
AccB7I	CCANNNNNTGG	1 cut(s)	3145
AciI	CCGC	1 cut(s)	3294
AclWI	GGATC	4 cut(s)	722, 2077, 2710, 3254
AcoI	YGGCCR	2 cut(s)	450, 2712
AcuI	CTGAAG	3 cut(s)	1908, 2246, 3357
AdeI	CACNNNGTG	1 cut(s)	527
AfaI	GTAC	5 cut(s)	196, 251, 2395, 2432, 3046
AfiI	CCNNNNNNNGG	2 cut(s)	1573, 3145
AflII	CTTAAG	1 cut(s)	2749
AgeI	ACCGGT	1 cut(s)	803
AjnI	CCWGG	5 cut(s)	553, 585, 1497, 2182, 3318
AjuI	GAANNNNNNNTTGG	4 cut(s)	391, 423, 2193, 2225
Alw21I	GWGCWC	3 cut(s)	1107, 1937, 2552
Alw26I	GTCTC	7 cut(s)	161, 426, 552, 685, 1295, 3035, 3110
AlwI	GGATC	4 cut(s)	722, 2077, 2710, 3254
AlwNI	CAGNNNCTG	1 cut(s)	2365
Ama87I	CYCGRG	1 cut(s)	3416
AoxI	GGCC	4 cut(s)	450, 1492, 2254, 2712
ApeKI	GCWGC	6 cut(s)	225, 313, 345, 994, 1269, 1699
ArsI	GACNNNNNNTTYG	2 cut(s)	34, 66
AsiGI	ACCGGT	1 cut(s)	803
Asp700I	GAANNNNTTC	4 cut(s)	51, 965, 1284, 1598
Asp718I	GGTACC	3 cut(s)	194, 2393, 3044
AspA2I	CCTAGG	1 cut(s)	952
AspS9I	GGNCC	7 cut(s)	411, 823, 1327, 1780, 2033, 2255, 2829
AsuC2I	CCSGG	1 cut(s)	3014
AsuHPI	GGTGA	3 cut(s)	793, 1055, 3017
AsuII	TTCGAA	2 cut(s)	645, 1127
AsuNHI	GCTAGC	1 cut(s)	3521
AvaI	CYCGRG	1 cut(s)	3416
AvaII	GGWCC	6 cut(s)	411, 823, 1327, 1780, 2033, 2829
AvrII	CCTAGG	1 cut(s)	952
AxyI	CCTNAGG	2 cut(s)	134, 304
BaeGI	GKGCMC	1 cut(s)	554
BanI	GGYRCC	4 cut(s)	194, 1877, 2393, 3044
BanII	GRGCYC	2 cut(s)	1736, 2552
BarI	GAAGNNNNNNTAC	2 cut(s)	730, 762
BbsI	GAAGAC	3 cut(s)	44, 599, 2288
Bbv12I	GWGCWC	3 cut(s)	1107, 1937, 2552
BbvI	GCAGC	6 cut(s)	237, 300, 357, 1006, 1281, 1711
BcgI	CGANNNNNNTGC	8 cut(s)	278, 312, 334, 368, 873, 907, 3397, 3431
BciT130I	CCWGG	5 cut(s)	555, 587, 1499, 2184, 3320
BciVI	GTATCC	1 cut(s)	2570
BclI	TGATCA	1 cut(s)	472
BcnI	CCSGG	1 cut(s)	3014
BcoDI	GTCTC	7 cut(s)	161, 426, 552, 685, 1295, 3035, 3110
BfmI	CTRYAG	3 cut(s)	479, 570, 1697
BfrI	CTTAAG	1 cut(s)	2749
BfuAI	ACCTGC	1 cut(s)	890
BfuI	GTATCC	1 cut(s)	2570
BglII	AGATCT	2 cut(s)	1471, 2013
BisI	GCNGC	6 cut(s)	226, 314, 346, 995, 1270, 1700
BlnI	CCTAGG	1 cut(s)	952
BlpI	GCTNAGC	1 cut(s)	923
BlsI	GCNGC	6 cut(s)	227, 315, 347, 996, 1271, 1701
Bme1390I	CCNGG	6 cut(s)	555, 587, 1499, 2184, 3014, 3320
Bme18I	GGWCC	6 cut(s)	411, 823, 1327, 1780, 2033, 2829
BmeT110I	CYCGRG	1 cut(s)	3416
BmgT120I	GGNCC	7 cut(s)	411, 823, 1327, 1780, 2033, 2255, 2829
BmiI	GGNNCC	8 cut(s)	196, 534, 1879, 1986, 2395, 2830, 2893, 3046
BmrFI	CCNGG	6 cut(s)	555, 587, 1499, 2184, 3014, 3320
BmsI	GCATC	3 cut(s)	1040, 1711, 2291
BmtI	GCTAGC	1 cut(s)	3525
BpiI	GAAGAC	3 cut(s)	44, 599, 2288
BplI	GAGNNNNNCTC	2 cut(s)	1094, 1126
BpmI	CTGGAG	4 cut(s)	608, 1481, 2484, 3375
Bpu1102I	GCTNAGC	1 cut(s)	923
Bpu14I	TTCGAA	2 cut(s)	645, 1127
BpuEI	CTTGAG	4 cut(s)	509, 1319, 1589, 2460
BpuMI	CCSGG	1 cut(s)	3014
BsaAI	YACGTR	1 cut(s)	110
BsaBI	GATNNNNATC	1 cut(s)	398
BsaI	GGTCTC	1 cut(s)	3110
BsaJI	CCNNGG	7 cut(s)	553, 952, 1177, 1498, 2328, 2564, 3319
BsaWI	WCCGGW	1 cut(s)	803
Bsc4I	CCNNNNNNNGG	2 cut(s)	1573, 3145
Bse118I	RCCGGY	1 cut(s)	803
Bse1I	ACTGG	6 cut(s)	153, 1495, 1782, 2101, 2683, 3223
Bse21I	CCTNAGG	2 cut(s)	134, 304
Bse3DI	GCAATG	1 cut(s)	3538
Bse8I	GATNNNNATC	1 cut(s)	398
BseBI	CCWGG	5 cut(s)	555, 587, 1499, 2184, 3320
BseDI	CCNNGG	7 cut(s)	553, 952, 1177, 1498, 2328, 2564, 3319
BseGI	GGATG	5 cut(s)	825, 1316, 2433, 2760, 2796
BseJI	GATNNNNATC	1 cut(s)	398
BseLI	CCNNNNNNNGG	2 cut(s)	1573, 3145
BseMI	GCAATG	1 cut(s)	3538
BseMII	CTCAG	7 cut(s)	148, 352, 1030, 1400, 1617, 1850, 2225
BseNI	ACTGG	6 cut(s)	153, 1495, 1782, 2101, 2683, 3223
BseRI	GAGGAG	2 cut(s)	1197, 3372
BseSI	GKGCMC	1 cut(s)	554
BseXI	GCAGC	6 cut(s)	237, 300, 357, 1006, 1281, 1711
BseYI	CCCAGC	3 cut(s)	1367, 1678, 2316
BsgI	GTGCAG	4 cut(s)	50, 244, 299, 1552
BshFI	GGCC	4 cut(s)	452, 1494, 2256, 2714
BshNI	GGYRCC	4 cut(s)	194, 1877, 2393, 3044
BshTI	ACCGGT	1 cut(s)	803
BsiHKAI	GWGCWC	3 cut(s)	1107, 1937, 2552
BsiHKCI	CYCGRG	1 cut(s)	3416
BsiSI	CCGG	3 cut(s)	453, 804, 3014
BslFI	GGGAC	4 cut(s)	669, 771, 1929, 2842
BslI	CCNNNNNNNGG	2 cut(s)	1573, 3145
BsmAI	GTCTC	7 cut(s)	161, 426, 552, 685, 1295, 3035, 3110
BsmBI	CGTCTC	2 cut(s)	552, 1295
BsmFI	GGGAC	4 cut(s)	669, 771, 1929, 2842
BsmI	GAATGC	3 cut(s)	315, 381, 1689
BsnI	GGCC	4 cut(s)	452, 1494, 2256, 2714
Bso31I	GGTCTC	1 cut(s)	3110
BsoBI	CYCGRG	1 cut(s)	3416
Bsp119I	TTCGAA	2 cut(s)	645, 1127
Bsp1286I	GDGCHC	5 cut(s)	554, 1107, 1736, 1937, 2552
Bsp1407I	TGTACA	1 cut(s)	2430
Bsp1720I	GCTNAGC	1 cut(s)	923
BspACI	CCGC	1 cut(s)	3294
BspANI	GGCC	4 cut(s)	452, 1494, 2256, 2714
BspCNI	CTCAG	7 cut(s)	147, 351, 1029, 1401, 1616, 1849, 2226
BspHI	TCATGA	1 cut(s)	2299
BspLI	GGNNCC	8 cut(s)	196, 534, 1879, 1986, 2395, 2830, 2893, 3046
BspMAI	CTGCAG	2 cut(s)	483, 1701
BspMI	ACCTGC	1 cut(s)	890
BspOI	GCTAGC	1 cut(s)	3525
BspPI	GGATC	4 cut(s)	722, 2077, 2710, 3254
BspQI	GCTCTTC	1 cut(s)	1523
BspT104I	TTCGAA	2 cut(s)	645, 1127
BspT107I	GGYRCC	4 cut(s)	194, 1877, 2393, 3044
BspTI	CTTAAG	1 cut(s)	2749
BspTNI	GGTCTC	1 cut(s)	3110
BsrDI	GCAATG	1 cut(s)	3538
BsrFI	RCCGGY	1 cut(s)	803
BsrGI	TGTACA	1 cut(s)	2430
BsrI	ACTGG	6 cut(s)	153, 1495, 1782, 2101, 2683, 3223
BssAI	RCCGGY	1 cut(s)	803
BssECI	CCNNGG	7 cut(s)	553, 952, 1177, 1498, 2328, 2564, 3319
BssT1I	CCWWGG	4 cut(s)	952, 1177, 2328, 2564
Bst2UI	CCWGG	5 cut(s)	555, 587, 1499, 2184, 3320
Bst4CI	ACNGT	7 cut(s)	73, 888, 1306, 1943, 2346, 2917, 3291
Bst6I	CTCTTC	5 cut(s)	681, 1523, 1678, 2265, 2926
BstAFI	CTTAAG	1 cut(s)	2749
BstAPI	GCANNNNNTGC	2 cut(s)	322, 3548
BstAUI	TGTACA	1 cut(s)	2430
BstBAI	YACGTR	1 cut(s)	110
BstBI	TTCGAA	2 cut(s)	645, 1127
BstC8I	GCNNGC	6 cut(s)	297, 1267, 1373, 1453, 2712, 3523
BstEII	GGTNACC	1 cut(s)	1064
BstF5I	GGATG	5 cut(s)	825, 1316, 2433, 2760, 2796
BstMAI	GTCTC	7 cut(s)	161, 426, 552, 685, 1295, 3035, 3110
BstMWI	GCNNNNNNNGC	4 cut(s)	322, 1684, 2734, 3548
BstNI	CCWGG	5 cut(s)	555, 587, 1499, 2184, 3320
BstNSI	RCATGY	2 cut(s)	1234, 1269
BstPI	GGTNACC	1 cut(s)	1064
BstSCI	CCNGG	6 cut(s)	553, 585, 1497, 2182, 3012, 3318
BstSFI	CTRYAG	3 cut(s)	479, 570, 1697
BstSLI	GKGCMC	1 cut(s)	554
BstV1I	GCAGC	6 cut(s)	237, 300, 357, 1006, 1281, 1711
BstV2I	GAAGAC	3 cut(s)	44, 599, 2288
BstX2I	RGATCY	2 cut(s)	1471, 2013
BstXI	CCANNNNNNTGG	1 cut(s)	1441
BstYI	RGATCY	2 cut(s)	1471, 2013
Bsu36I	CCTNAGG	2 cut(s)	134, 304
BsuI	GTATCC	1 cut(s)	2570
BsuRI	GGCC	4 cut(s)	452, 1494, 2256, 2714
BtsCI	GGATG	5 cut(s)	825, 1316, 2433, 2760, 2796
BtsI	GCAGTG	2 cut(s)	11, 62
BtsIMutI	CAGTG	6 cut(s)	11, 62, 346, 1775, 2676, 3287
BveI	ACCTGC	1 cut(s)	890
Cac8I	GCNNGC	6 cut(s)	297, 1267, 1373, 1453, 2712, 3523
CaiI	CAGNNNCTG	1 cut(s)	2365
CciI	TCATGA	1 cut(s)	2299
Cfr10I	RCCGGY	1 cut(s)	803
Cfr13I	GGNCC	7 cut(s)	411, 823, 1327, 1780, 2033, 2255, 2829
CseI	GACGC	1 cut(s)	3259
Csp6I	GTAC	5 cut(s)	195, 250, 2394, 2431, 3045
CspAI	ACCGGT	1 cut(s)	803
CviQI	GTAC	5 cut(s)	195, 250, 2394, 2431, 3045
DraIII	CACNNNGTG	1 cut(s)	527
DrdI	GACNNNNNNGTC	2 cut(s)	418, 3184
DseDI	GACNNNNNNGTC	2 cut(s)	418, 3184
EaeI	YGGCCR	2 cut(s)	450, 2712
Eam1104I	CTCTTC	5 cut(s)	681, 1523, 1678, 2265, 2926
EarI	CTCTTC	5 cut(s)	681, 1523, 1678, 2265, 2926
Ecl136II	GAGCTC	1 cut(s)	2550
Eco130I	CCWWGG	4 cut(s)	952, 1177, 2328, 2564
Eco24I	GRGCYC	2 cut(s)	1736, 2552
Eco31I	GGTCTC	1 cut(s)	3110
Eco47I	GGWCC	6 cut(s)	411, 823, 1327, 1780, 2033, 2829
Eco53kI	GAGCTC	1 cut(s)	2550
Eco57I	CTGAAG	3 cut(s)	1908, 2246, 3357
Eco81I	CCTNAGG	2 cut(s)	134, 304
Eco88I	CYCGRG	1 cut(s)	3416
Eco91I	GGTNACC	1 cut(s)	1064
EcoICRI	GAGCTC	1 cut(s)	2550
EcoO109I	RGGNCCY	1 cut(s)	2033
EcoO65I	GGTNACC	1 cut(s)	1064
EcoRI	GAATTC	2 cut(s)	2936, 3225
EcoRII	CCWGG	5 cut(s)	553, 585, 1497, 2182, 3318
EcoT14I	CCWWGG	4 cut(s)	952, 1177, 2328, 2564
EcoT22I	ATGCAT	3 cut(s)	1207, 2284, 3484
EcoT38I	GRGCYC	2 cut(s)	1736, 2552
ErhI	CCWWGG	4 cut(s)	952, 1177, 2328, 2564
Esp3I	CGTCTC	2 cut(s)	552, 1295
FalI	AAGNNNNNCTT	8 cut(s)	448, 480, 1269, 1301, 3154, 3186, 3214, 3246
FaqI	GGGAC	4 cut(s)	669, 771, 1929, 2842
FauI	CCCGC	1 cut(s)	3287
FauNDI	CATATG	3 cut(s)	27, 2048, 2077
FbaI	TGATCA	1 cut(s)	472
Fnu4HI	GCNGC	6 cut(s)	226, 314, 346, 995, 1270, 1700
FokI	GGATG	5 cut(s)	832, 1303, 2420, 2747, 2783
FriOI	GRGCYC	2 cut(s)	1736, 2552
Fsp4HI	GCNGC	6 cut(s)	226, 314, 346, 995, 1270, 1700
GluI	GCNGC	6 cut(s)	226, 314, 346, 995, 1270, 1700
GsaI	CCCAGC	3 cut(s)	1371, 1682, 2320
GsuI	CTGGAG	4 cut(s)	608, 1481, 2484, 3375
HaeIII	GGCC	4 cut(s)	452, 1494, 2256, 2714
HapII	CCGG	3 cut(s)	453, 804, 3014
HgaI	GACGC	1 cut(s)	3259
HincII	GTYRAC	5 cut(s)	876, 1228, 1309, 1846, 3177
HindII	GTYRAC	5 cut(s)	876, 1228, 1309, 1846, 3177
HindIII	AAGCTT	3 cut(s)	622, 3163, 3389
HpaI	GTTAAC	1 cut(s)	1228
HpaII	CCGG	3 cut(s)	453, 804, 3014
HphI	GGTGA	3 cut(s)	793, 1055, 3017
Hpy166II	GTNNAC	8 cut(s)	876, 1228, 1309, 1846, 2274, 2309, 2756, 3177
Hpy188I	TCNGA	9 cut(s)	356, 370, 830, 1410, 1523, 1606, 2178, 2235, 2547
Hpy8I	GTNNAC	8 cut(s)	876, 1228, 1309, 1846, 2274, 2309, 2756, 3177
Hpy99I	CGWCG	1 cut(s)	888
HpyCH4III	ACNGT	7 cut(s)	73, 888, 1306, 1943, 2346, 2917, 3291
HpyCH4IV	ACGT	1 cut(s)	109
HpyF10VI	GCNNNNNNNGC	4 cut(s)	322, 1684, 2734, 3548
HpySE526I	ACGT	1 cut(s)	109
KpnI	GGTACC	3 cut(s)	198, 2397, 3048
Ksp22I	TGATCA	1 cut(s)	472
KspAI	GTTAAC	1 cut(s)	1228
LguI	GCTCTTC	1 cut(s)	1523
LmnI	GCTCC	4 cut(s)	1184, 1435, 2004, 2891
Lsp1109I	GCAGC	6 cut(s)	237, 300, 357, 1006, 1281, 1711
LweI	GCATC	3 cut(s)	1040, 1711, 2291
MaeII	ACGT	1 cut(s)	109
MaeIII	GTNAC	8 cut(s)	21, 105, 1064, 1196, 1629, 1966, 2355, 2948
MfeI	CAATTG	4 cut(s)	34, 2020, 2732, 2771
MflI	RGATCY	2 cut(s)	1471, 2013
MhlI	GDGCHC	5 cut(s)	554, 1107, 1736, 1937, 2552
MlyI	GAGTC	6 cut(s)	1420, 1587, 1637, 1928, 2371, 2563
MmeI	TCCRAC	2 cut(s)	938, 1896
Mph1103I	ATGCAT	3 cut(s)	1207, 2284, 3484
MroXI	GAANNNNTTC	4 cut(s)	51, 965, 1284, 1598
MslI	CAYNNNNRTG	2 cut(s)	2957, 3289
MspA1I	CMGCKG	1 cut(s)	1371
MspCI	CTTAAG	1 cut(s)	2749
MspI	CCGG	3 cut(s)	453, 804, 3014
MspR9I	CCNGG	6 cut(s)	555, 587, 1499, 2184, 3014, 3320
MunI	CAATTG	4 cut(s)	34, 2020, 2732, 2771
Mva1269I	GAATGC	3 cut(s)	315, 381, 1689
MvaI	CCWGG	5 cut(s)	555, 587, 1499, 2184, 3320
MwoI	GCNNNNNNNGC	4 cut(s)	322, 1684, 2734, 3548
NciI	CCSGG	1 cut(s)	3014
NdeI	CATATG	3 cut(s)	27, 2048, 2077
NheI	GCTAGC	1 cut(s)	3521
NlaIV	GGNNCC	8 cut(s)	196, 534, 1879, 1986, 2395, 2830, 2893, 3046
NmuCI	GTSAC	4 cut(s)	105, 1629, 1966, 2948
NsiI	ATGCAT	3 cut(s)	1207, 2284, 3484
NspI	RCATGY	2 cut(s)	1234, 1269
NspV	TTCGAA	2 cut(s)	645, 1127
PaeI	GCATGC	1 cut(s)	1269
PagI	TCATGA	1 cut(s)	2299
PciSI	GCTCTTC	1 cut(s)	1523
PcsI	WCGNNNNNNNCGW	2 cut(s)	165, 3423
PctI	GAATGC	3 cut(s)	315, 381, 1689
PdmI	GAANNNNTTC	4 cut(s)	51, 965, 1284, 1598
PflMI	CCANNNNNTGG	1 cut(s)	3145
PfoI	TCCNGGA	3 cut(s)	585, 2182, 3012
PinAI	ACCGGT	1 cut(s)	803
PkrI	GCNGC	6 cut(s)	227, 315, 347, 996, 1271, 1701
PleI	GAGTC	6 cut(s)	1419, 1586, 1636, 1927, 2370, 2563
PpsI	GAGTC	6 cut(s)	1419, 1586, 1636, 1927, 2370, 2563
Ppu21I	YACGTR	1 cut(s)	110
PpuMI	RGGWCCY	1 cut(s)	2033
PsiI	TTATAA	2 cut(s)	1863, 1977
Psp124BI	GAGCTC	1 cut(s)	2552
Psp5II	RGGWCCY	1 cut(s)	2033
Psp6I	CCWGG	5 cut(s)	553, 585, 1497, 2182, 3318
PspEI	GGTNACC	1 cut(s)	1064
PspFI	CCCAGC	3 cut(s)	1367, 1678, 2316
PspGI	CCWGG	5 cut(s)	553, 585, 1497, 2182, 3318
PspN4I	GGNNCC	8 cut(s)	196, 534, 1879, 1986, 2395, 2830, 2893, 3046
PspPI	GGNCC	7 cut(s)	411, 823, 1327, 1780, 2033, 2255, 2829
PspPPI	RGGWCCY	1 cut(s)	2033
PsrI	GAACNNNNNNTAC	2 cut(s)	3188, 3220
PstI	CTGCAG	2 cut(s)	483, 1701
PstNI	CAGNNNCTG	1 cut(s)	2365
PsuI	RGATCY	2 cut(s)	1471, 2013
PvuII	CAGCTG	1 cut(s)	1371
RsaI	GTAC	5 cut(s)	196, 251, 2395, 2432, 3046
RsaNI	GTAC	5 cut(s)	195, 250, 2394, 2431, 3045
RseI	CAYNNNNRTG	2 cut(s)	2957, 3289
SacI	GAGCTC	1 cut(s)	2552
SapI	GCTCTTC	1 cut(s)	1523
SatI	GCNGC	6 cut(s)	226, 314, 346, 995, 1270, 1700
Sau96I	GGNCC	7 cut(s)	411, 823, 1327, 1780, 2033, 2255, 2829
SchI	GAGTC	6 cut(s)	1420, 1587, 1637, 1928, 2371, 2563
ScrFI	CCNGG	6 cut(s)	555, 587, 1499, 2184, 3014, 3320
SduI	GDGCHC	5 cut(s)	554, 1107, 1736, 1937, 2552
SfaNI	GCATC	3 cut(s)	1040, 1711, 2291
SfcI	CTRYAG	3 cut(s)	479, 570, 1697
SfuI	TTCGAA	2 cut(s)	645, 1127
SinI	GGWCC	6 cut(s)	411, 823, 1327, 1780, 2033, 2829
SmiMI	CAYNNNNRTG	2 cut(s)	2957, 3289
SmlI	CTYRAG	5 cut(s)	488, 1298, 1568, 2475, 2749
SmoI	CTYRAG	5 cut(s)	488, 1298, 1568, 2475, 2749
SphI	GCATGC	1 cut(s)	1269
SsiI	CCGC	1 cut(s)	3294
SspI	AATATT	3 cut(s)	2542, 2685, 2922
SstI	GAGCTC	1 cut(s)	2552
StyD4I	CCNGG	6 cut(s)	553, 585, 1497, 2182, 3012, 3318
StyI	CCWWGG	4 cut(s)	952, 1177, 2328, 2564
TaaI	ACNGT	7 cut(s)	73, 888, 1306, 1943, 2346, 2917, 3291
TaiI	ACGT	1 cut(s)	112
TaqI	TCGA	9 cut(s)	159, 168, 467, 645, 1127, 1173, 1388, 1414, 1476
TatI	WGTACW	2 cut(s)	249, 2430
TscAI	CASTG	6 cut(s)	18, 69, 346, 1782, 2683, 3294
TseFI	GTSAC	4 cut(s)	105, 1629, 1966, 2948
TseI	GCWGC	6 cut(s)	225, 313, 345, 994, 1269, 1699
Tsp45I	GTSAC	4 cut(s)	105, 1629, 1966, 2948
TspGWI	ACGGA	1 cut(s)	632
TspRI	CASTG	6 cut(s)	18, 69, 346, 1782, 2683, 3294
Van91I	CCANNNNNTGG	1 cut(s)	3145
Vha464I	CTTAAG	1 cut(s)	2749
VpaK11BI	GGWCC	6 cut(s)	411, 823, 1327, 1780, 2033, 2829
XbaI	TCTAGA	1 cut(s)	1465
XceI	RCATGY	2 cut(s)	1234, 1269
XcmI	CCANNNNNNNNNTGG	1 cut(s)	2284
XmaJI	CCTAGG	1 cut(s)	952
XmnI	GAANNNNTTC	4 cut(s)	51, 965, 1284, 1598
Zsp2I	ATGCAT	3 cut(s)	1207, 2284, 3484

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.