Rroxscaffold_3G00231430

LRR receptor-like serine threonine-protein kinase

Basic Information

Type: gene
Biological Identity
rosa_roxburghii
GWHEROQ00000003
Physical Location & Seq
Reverse (-)
16631220 .. 16633071
1852 bp
Loading structure...
UTR
Exon/CDS
Intron
Rroxscaffold_3G00231430.1

Sequence Viewer

Length: 843 bp
ATGCATCGACACGAGAGAAGCGCGCTTCTCATCTTTAAGGCAGATCTTATCGATGCTTCGGGTAGGCTATCATCTTGGGAGGGTCAAAATTGTTGTCAATGGAAAGGCATTTCATGCAACAACCGCACCGGTCATGTTGAAAAGATGGACCTCCGCAATACAAGTCCAGCTCCATCTATTGATGTCGAAGACCGGGAGTTTGAGGCTTATGAAGAGTCCTTTTGGGGGATTCCACCTCATCTTGGTAACCTATCAAACTTGAACTATCTTGACCTCGGTGGTCCAGCCTTTTCACTATGGCTTCTATCTCAAACCGAACCAAGATATGTCACTCTAAGCAATACAAGCATCTCGGATTCCATTCCAGAGGAATGGTTCGTGAAAATATCTTCCGGCCAACTCCAATTTTTGGATTTATCTTTCAACGAAATTCGTGGAAAGCTTCCAGTCCAATTGATAGTTCCAAATTTAGTGGGTCTAGATTTGAGACATAATCAATTCCACGGCTCACTCCCGCTTTGGTTGTGTAAGGAGGCTTCCTACTTAAATCTTGCTAGCAATTCATTTTCCGGGCCAATTCCGTCAACTTTTGACCAACATTTTCCAAAATTGCGAGAACTGCATCTCTATGAAAATTATTTGAATGGCACGATTCCATCCTCTCGTTTGCAACATTCGAAGATGTTAATCTTTTCTCTAAGAAGCAACAACATTTCTGGAGAATTTCCTCAAGCATGGAGTACGTGGGGTGACATATACATTATAGATGTTGGAGACAATCATCTCTCAGAAATATTCCCAGTTCAATGGGTATCCCAAGTTCACTTTTTATGTTGTCGATGA

Protein Analysis

280

Amino Acids

31.95

Weight (kDa)

5.62

Isoelectric Point (pI)

43.66

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
LRRNT_2 PF08263 4 - 40 2.5e-11 Leucine rich repeat N-terminal domain
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
Loading...
Style Settings
Image
Tree File
Tip: Beautify your tree with professional tools

Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.

Publication-ready

Orthologous Genes (Group: OG0000048)

Species Orthologous Gene IDs
arabidopsis_thaliana AT2G34930
fragaria_vesca FvH4_3g12670 FvH4_3g12672 FvH4_3g12740 FvH4_3g12742 FvH4_3g12770 FvH4_3g12770 FvH4_3g12860 FvH4_3g12890 FvH4_3g13431 FvH4_3g13433 FvH4_3g13435 FvH4_3g13470 FvH4_3g13470 FvH4_3g13480 FvH4_3g13562 FvH4_3g13580 FvH4_3g13600 FvH4_3g13600 FvH4_3g13600 FvH4_3g13600 FvH4_3g13600 FvH4_3g13600 FvH4_3g13610 FvH4_3g13620 FvH4_3g13620 FvH4_3g23240 FvH4_3g32910 FvH4_3g35070 FvH4_3g45520 FvH4_5g08430 FvH4_5g08450 FvH4_6g53230 FvH4_6g53300
malus_domestica MD05G1217600.v1.1 MD05G1217700.v1.1 MD05G1224700.v1.1 MD05G1225100.v1.1 MD05G1225300.v1.1 MD05G1225400.v1.1 MD05G1235900.v1.1 MD05G1236100.v1.1 MD05G1236300.v1.1 MD05G1237200.v1.1 MD05G1241600.v1.1 MD05G1245700.v1.1 MD05G1245800.v1.1 MD05G1245900.v1.1 MD05G1246000.v1.1 MD05G1246100.v1.1 MD05G1246300.v1.1 MD05G1246400.v1.1 MD05G1246500.v1.1 MD05G1248100.v1.1 MD05G1248200.v1.1 MD05G1264300.v1.1 MD05G1275900.v1.1 MD07G1051400.v1.1 MD09G1012600.v1.1 MD09G1012700.v1.1 MD09G1012800.v1.1 MD10G1221400.v1.1 MD10G1221500.v1.1 MD10G1221600.v1.1 MD10G1221900.v1.1 MD10G1222200.v1.1 MD10G1222400.v1.1 MD10G1222500.v1.1 MD10G1222900.v1.1 MD10G1223000.v1.1 MD10G1223100.v1.1 MD10G1223500.v1.1 MD10G1228000.v1.1 MD12G1019600.v1.1 MD12G1020000.v1.1 MD12G1020100.v1.1 MD17G1013200.v1.1 MD17G1013300.v1.1 MD17G1013400.v1.1
prunus_persica Prupe.1G060500_v2.0.a1 Prupe.1G100100_v2.0.a1 Prupe.3G124000_v2.0.a1 Prupe.3G304400_v2.0.a1 Prupe.4G116800_v2.0.a1 Prupe.4G116900_v2.0.a1 Prupe.4G117000_v2.0.a1 Prupe.4G121800_v2.0.a1 Prupe.4G121900_v2.0.a1 Prupe.4G122000_v2.0.a1 Prupe.4G122100_v2.0.a1 Prupe.4G122200_v2.0.a1 Prupe.4G122300_v2.0.a1 Prupe.4G122500_v2.0.a1 Prupe.4G122600_v2.0.a1 Prupe.4G122800_v2.0.a1 Prupe.4G122900_v2.0.a1 Prupe.4G123000_v2.0.a1 Prupe.4G123100_v2.0.a1 Prupe.4G123200_v2.0.a1 Prupe.4G131500_v2.0.a1 Prupe.4G131600_v2.0.a1 Prupe.7G032500_v2.0.a1 Prupe.7G032900_v2.0.a1 Prupe.7G033000_v2.0.a1 Prupe.7G033100_v2.0.a1 Prupe.7G033300_v2.0.a1 Prupe.7G033600_v2.0.a1 Prupe.7G034600_v2.0.a1 Prupe.7G040200_v2.0.a1 Prupe.7G059200_v2.0.a1
pyrus_communis pycom05g20580 pycom05g20590 pycom05g20760 pycom05g20800 pycom05g21280 pycom05g21290 pycom05g21820 pycom05g21830 pycom05g22180 pycom05g22190 pycom05g22210 pycom05g22450 pycom05g22460 pycom05g22470 pycom05g22480 pycom05g22490 pycom05g23770 pycom05g23780 pycom05g24050 pycom05g24060 pycom07g03910 pycom10g18700 pycom10g18720 pycom10g18730 pycom10g18740 pycom10g19150 pycom111g01060 pycom12g01660 pycom12g01690 pycom12g01720 pycom12g01740 pycom12g01750 pycom12g01770 pycom12g01810 pycom12g01820 pycom12g01830 pycom12g01840 pycom12g01870 pycom12g01900 pycom17g01060 pycom17g01070
rosa_chinensis RchiOBHm_Chr1g0315041 RchiOBHm_Chr1g0315051 RchiOBHm_Chr1g0315071 RchiOBHm_Chr1g0315161 RchiOBHm_Chr1g0315211 RchiOBHm_Chr1g0315251 RchiOBHm_Chr1g0315321 RchiOBHm_Chr1g0315391 RchiOBHm_Chr1g0315451 RchiOBHm_Chr1g0315481 RchiOBHm_Chr1g0315551 RchiOBHm_Chr1g0315601 RchiOBHm_Chr1g0315621 RchiOBHm_Chr1g0359221 RchiOBHm_Chr2g0142981 RchiOBHm_Chr2g0143001 RchiOBHm_Chr2g0143061 RchiOBHm_Chr2g0143091 RchiOBHm_Chr2g0175321 RchiOBHm_Chr2g0175341 RchiOBHm_Chr2g0175361 RchiOBHm_Chr2g0175371 RchiOBHm_Chr3g0470491 RchiOBHm_Chr3g0480881 RchiOBHm_Chr3g0485511 RchiOBHm_Chr5g0020741 RchiOBHm_Chr5g0020901 RchiOBHm_Chr5g0020931 RchiOBHm_Chr5g0020941 RchiOBHm_Chr5g0020961 RchiOBHm_Chr5g0020971 RchiOBHm_Chr5g0021451 RchiOBHm_Chr5g0021531 RchiOBHm_Chr5g0021831 RchiOBHm_Chr5g0021841 RchiOBHm_Chr5g0021931 RchiOBHm_Chr5g0021941 RchiOBHm_Chr5g0021981 RchiOBHm_Chr5g0021991 RchiOBHm_Chr5g0022011 RchiOBHm_Chr5g0022181 RchiOBHm_Chr5g0022191 RchiOBHm_Chr5g0022211 RchiOBHm_Chr5g0022221 RchiOBHm_Chr5g0022231 RchiOBHm_Chr5g0022291 RchiOBHm_Chr5g0022301 RchiOBHm_Chr5g0022331 RchiOBHm_Chr5g0022361 RchiOBHm_Chr5g0022371 RchiOBHm_Chr5g0022381 RchiOBHm_Chr5g0022401 RchiOBHm_Chr5g0022431 RchiOBHm_Chr5g0022451 RchiOBHm_Chr5g0022541 RchiOBHm_Chr5g0022591 RchiOBHm_Chr5g0022601 RchiOBHm_Chr5g0022701 RchiOBHm_Chr5g0022741 RchiOBHm_Chr5g0022791 RchiOBHm_Chr5g0022811 RchiOBHm_Chr5g0022851 RchiOBHm_Chr5g0029441 RchiOBHm_Chr5g0041631 RchiOBHm_Chr5g0069391 RchiOBHm_Chr6g0273811 RchiOBHm_Chr6g0273831 RchiOBHm_Chr6g0275331 RchiOBHm_Chr7g0219061
rosa_laevigata RLG00000002463 RLG00000020007 RLG00000020008 RLG00000022320 RLG00000022321 RLG00000023446 RLG00000030742 RLG00000030743 RLG00000030747 RLG00000032557 RLG00000032564 RLG00000032571 RLG00000032573 RLG00000032574 RLG00000032612 RLG00000032633 RLG00000032636 RLG00000032638 RLG00000032650 RLG00000032651 RLG00000032652 RLG00000032653 RLG00000032655 RLG00000032673 RLG00000032678 RLG00000032769 RLG00000032857 RLG00000033168 RLG00000033465 RLG00000034086 RLG00000034222 RLG00000035290
rosa_multiflora Rmu_co8143358.1_g000001 Rmu_co8518791.1_g000001 Rmu_sc0000178.1_g000008 Rmu_sc0000178.1_g000014 Rmu_sc0000401.1_g000005 Rmu_sc0000401.1_g000013 Rmu_sc0000401.1_g000017 Rmu_sc0000401.1_g000018 Rmu_sc0000401.1_g000024 Rmu_sc0000401.1_g000025 Rmu_sc0000576.1_g000020 Rmu_sc0001585.1_g000003 Rmu_sc0001585.1_g000005 Rmu_sc0001585.1_g000008 Rmu_sc0001784.1_g000006 Rmu_sc0001784.1_g000011 Rmu_sc0001784.1_g000022 Rmu_sc0001784.1_g000028 Rmu_sc0002052.1_g000004 Rmu_sc0002052.1_g000011 Rmu_sc0002277.1_g000003 Rmu_sc0002277.1_g000006 Rmu_sc0002277.1_g000024 Rmu_sc0002658.1_g000012 Rmu_sc0003512.1_g000004 Rmu_sc0003512.1_g000007 Rmu_sc0004180.1_g000016 Rmu_sc0004180.1_g000029 Rmu_sc0004180.1_g000034 Rmu_sc0005639.1_g000008 Rmu_sc0005639.1_g000023 Rmu_sc0006070.1_g000016 Rmu_sc0006070.1_g000017 Rmu_sc0006966.1_g000021 Rmu_sc0006966.1_g000023 Rmu_sc0007239.1_g000003 Rmu_sc0008460.1_g000010 Rmu_sc0009984.1_g000008 Rmu_sc0010181.1_g000005 Rmu_sc0010181.1_g000010 Rmu_sc0010503.1_g000006 Rmu_sc0011646.1_g000003 Rmu_sc0012984.1_g000011 Rmu_sc0016972.1_g000005 Rmu_sc0016972.1_g000008 Rmu_sc0023070.1_g000003 Rmu_sc0025660.1_g000001 Rmu_ssc0000322.1_g000019
rosa_roxburghii Rroxscaffold_1G00038860 Rroxscaffold_1G00053490 Rroxscaffold_1G00053500 Rroxscaffold_1G00054230 Rroxscaffold_1G00056460 Rroxscaffold_1G00056470 Rroxscaffold_1G00056480 Rroxscaffold_1G00056500 Rroxscaffold_1G00056510 Rroxscaffold_1G00056620 Rroxscaffold_1G00056690 Rroxscaffold_1G00056710 Rroxscaffold_1G00056720 Rroxscaffold_1G00056730 Rroxscaffold_1G00056740 Rroxscaffold_1G00056750 Rroxscaffold_1G00056760 Rroxscaffold_1G00056870 Rroxscaffold_1G00056900 Rroxscaffold_1G00057120 Rroxscaffold_1G00057560 Rroxscaffold_2G00077430 Rroxscaffold_2G00102160 Rroxscaffold_3G00231420 Rroxscaffold_3G00231430 Rroxscaffold_4G00297230 Rroxscaffold_4G00331570 Rroxscaffold_6G00396700 Rroxscaffold_6G00400940 Rroxscaffold_7G00192740
rosa_rugosa Rorug01G0004400 Rorug01G0004500 Rorug02G0377600 Rorug02G0378000 Rorug02G0582800 Rorug02G0583400 Rorug03G0187000 Rorug03G0218800 Rorug04G0081200 Rorug05G0062700 Rorug05G0062700 Rorug05G0063100 Rorug05G0063200 Rorug05G0063200 Rorug05G0063200 Rorug05G0067000 Rorug05G0069700 Rorug05G0069900 Rorug05G0070000 Rorug05G0070100 Rorug05G0070300 Rorug05G0070400 Rorug05G0070600 Rorug05G0070600 Rorug05G0072300 Rorug05G0072400 Rorug05G0072500 Rorug05G0072500 Rorug05G0072600.1 Rorug05G0072700 Rorug05G0072800 Rorug05G0072800 Rorug05G0072900 Rorug05G0073000 Rorug05G0073000 Rorug05G0073400 Rorug05G0073400 Rorug05G0073400 Rorug05G0074800 Rorug05G0075000 Rorug05G0114300 Rorug05G0194200 Rorug06G0097800
rosa_samantha Rh2AG401400 Rh2CG387600 Rh2CG417000 Rh2CG637400 Rh5CG169600 Rh5CG172100 Rh5CG175200 Rh5CG317100 Rh6DG187900
rosa_wichuraiana Rw1G000750 Rw1G000790 Rw1G000820 Rw1G000860 Rw1G000880 Rw1G000910 Rw2G035180 Rw2G035200 Rw2G035240 Rw2G054370 Rw2G054380 Rw5G013570 Rw5G013580 Rw5G013590 Rw5G013910 Rw5G013980 Rw5G014110 Rw5G014120 Rw5G014280 Rw5G014310 Rw5G014400 Rw5G014420 Rw5G014440 Rw5G014460 Rw5G014480 Rw5G014500 Rw5G014520 Rw5G014530 Rw5G042390

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AccB7I CCANNNNNTGG 1 cut(s) 409
AccII CGCG 1 cut(s) 23
AciI CCGC 3 cut(s) 124, 154, 515
AcoI YGGCCR 1 cut(s) 394
AcsI RAATTY 3 cut(s) 429, 466, 722
AfaI GTAC 1 cut(s) 742
AfiI CCNNNNNNNGG 3 cut(s) 225, 242, 409
AgeI ACCGGT 1 cut(s) 128
AgsI TTSAA 5 cut(s) 140, 262, 424, 643, 806
AjuI GAANNNNNNNTTGG 2 cut(s) 444, 476
AluBI AGCT 2 cut(s) 170, 442
AluI AGCT 2 cut(s) 170, 442
Alw26I GTCTC 2 cut(s) 481, 768
AoxI GGCC 2 cut(s) 394, 572
ApoI RAATTY 3 cut(s) 429, 466, 722
ArsI GACNNNNNNTTYG 4 cut(s) 79, 111, 182, 214
AsiGI ACCGGT 1 cut(s) 128
AspLEI GCGC 2 cut(s) 23, 25
AspS9I GGNCC 3 cut(s) 148, 281, 572
AsuC2I CCSGG 2 cut(s) 194, 571
AsuHPI GGTGA 1 cut(s) 761
AsuII TTCGAA 1 cut(s) 677
AsuNHI GCTAGC 1 cut(s) 554
AvaII GGWCC 2 cut(s) 148, 281
BarI GAAGNNNNNNTAC 2 cut(s) 520, 552
BauI CACGAG 1 cut(s) 11
BbsI GAAGAC 1 cut(s) 195
BccI CCATC 3 cut(s) 139, 181, 664
BceAI ACGGC 1 cut(s) 520
BciVI GTATCC 1 cut(s) 823
BcnI CCSGG 2 cut(s) 194, 571
BcoDI GTCTC 2 cut(s) 481, 768
BfaI CTAG 2 cut(s) 479, 555
BfuI GTATCC 1 cut(s) 823
BglII AGATCT 1 cut(s) 43
Bme1390I CCNGG 2 cut(s) 194, 571
Bme18I GGWCC 2 cut(s) 148, 281
BmgT120I GGNCC 3 cut(s) 148, 281, 572
BmrFI CCNGG 2 cut(s) 194, 571
BmrI ACTGGG 1 cut(s) 794
BmsI GCATC 4 cut(s) 13, 43, 357, 631
BmtI GCTAGC 1 cut(s) 558
BmuI ACTGGG 1 cut(s) 794
BpiI GAAGAC 1 cut(s) 195
BpmI CTGGAG 1 cut(s) 738
Bpu14I TTCGAA 1 cut(s) 677
BpuEI CTTGAG 1 cut(s) 714
BpuMI CCSGG 2 cut(s) 194, 571
Bsa29I ATCGAT 1 cut(s) 51
BsaAI YACGTR 1 cut(s) 744
BsaBI GATNNNNATC 1 cut(s) 686
BsaJI CCNNGG 2 cut(s) 274, 502
BsaWI WCCGGW 1 cut(s) 128
Bsc4I CCNNNNNNNGG 3 cut(s) 225, 242, 409
Bse118I RCCGGY 1 cut(s) 128
Bse1I ACTGG 2 cut(s) 446, 800
Bse8I GATNNNNATC 1 cut(s) 686
BseCI ATCGAT 1 cut(s) 51
BseDI CCNNGG 2 cut(s) 274, 502
BseGI GGATG 1 cut(s) 656
BseJI GATNNNNATC 1 cut(s) 686
BseLI CCNNNNNNNGG 3 cut(s) 225, 242, 409
BseMII CTCAG 1 cut(s) 801
BseNI ACTGG 2 cut(s) 446, 800
BsePI GCGCGC 1 cut(s) 21
Bsh1236I CGCG 1 cut(s) 23
BshFI GGCC 2 cut(s) 396, 574
BshTI ACCGGT 1 cut(s) 128
BshVI ATCGAT 1 cut(s) 51
BsiSI CCGG 4 cut(s) 129, 193, 393, 570
BslI CCNNNNNNNGG 3 cut(s) 225, 242, 409
BsmAI GTCTC 2 cut(s) 481, 768
BsnI GGCC 2 cut(s) 396, 574
Bsp119I TTCGAA 1 cut(s) 677
Bsp143I GATC 1 cut(s) 43
BspACI CCGC 3 cut(s) 124, 154, 515
BspANI GGCC 2 cut(s) 396, 574
BspCNI CTCAG 1 cut(s) 800
BspDI ATCGAT 1 cut(s) 51
BspFNI CGCG 1 cut(s) 23
BspOI GCTAGC 1 cut(s) 558
BspT104I TTCGAA 1 cut(s) 677
BsrFI RCCGGY 1 cut(s) 128
BsrI ACTGG 2 cut(s) 446, 800
BssAI RCCGGY 1 cut(s) 128
BssECI CCNNGG 2 cut(s) 274, 502
BssHII GCGCGC 1 cut(s) 21
BssMI GATC 1 cut(s) 43
BssSI CACGAG 1 cut(s) 11
Bst2BI CACGAG 1 cut(s) 11
Bst6I CTCTTC 1 cut(s) 207
BstAPI GCANNNNNTGC 1 cut(s) 114
BstBAI YACGTR 1 cut(s) 744
BstBI TTCGAA 1 cut(s) 677
BstC8I GCNNGC 2 cut(s) 23, 556
BstDEI CTNAG 3 cut(s) 335, 698, 787
BstDSI CCRYGG 1 cut(s) 502
BstEII GGTNACC 1 cut(s) 245
BstF5I GGATG 1 cut(s) 656
BstFNI CGCG 1 cut(s) 23
BstHHI GCGC 2 cut(s) 23, 25
BstKTI GATC 1 cut(s) 46
BstMAI GTCTC 2 cut(s) 481, 768
BstMBI GATC 1 cut(s) 43
BstMWI GCNNNNNNNGC 4 cut(s) 114, 123, 345, 619
BstPI GGTNACC 1 cut(s) 245
BstSCI CCNGG 2 cut(s) 192, 569
BstUI CGCG 1 cut(s) 23
BstV2I GAAGAC 1 cut(s) 195
BstX2I RGATCY 1 cut(s) 43
BstXI CCANNNNNNTGG 2 cut(s) 372, 807
BstYI RGATCY 1 cut(s) 43
Bsu15I ATCGAT 1 cut(s) 51
BsuI GTATCC 1 cut(s) 823
BsuRI GGCC 2 cut(s) 396, 574
BsuTUI ATCGAT 1 cut(s) 51
BtgI CCRYGG 1 cut(s) 502
BtsCI GGATG 1 cut(s) 656
Cac8I GCNNGC 2 cut(s) 23, 556
CfoI GCGC 2 cut(s) 23, 25
Cfr10I RCCGGY 1 cut(s) 128
Cfr13I GGNCC 3 cut(s) 148, 281, 572
ClaI ATCGAT 1 cut(s) 51
Csp6I GTAC 1 cut(s) 741
CspAI ACCGGT 1 cut(s) 128
CspCI CAANNNNNGTGG 2 cut(s) 453, 488
CviAII CATG 3 cut(s) 114, 134, 735
CviQI GTAC 1 cut(s) 741
DdeI CTNAG 3 cut(s) 335, 698, 787
DpnI GATC 1 cut(s) 45
DpnII GATC 1 cut(s) 43
EaeI YGGCCR 1 cut(s) 394
Eam1104I CTCTTC 1 cut(s) 207
EarI CTCTTC 1 cut(s) 207
Eco47I GGWCC 2 cut(s) 148, 281
Eco91I GGTNACC 1 cut(s) 245
EcoO65I GGTNACC 1 cut(s) 245
EcoT22I ATGCAT 1 cut(s) 6
FaeI CATG 3 cut(s) 117, 137, 738
FatI CATG 3 cut(s) 113, 133, 734
FauI CCCGC 1 cut(s) 522
FokI GGATG 1 cut(s) 643
FspBI CTAG 2 cut(s) 479, 555
GlaI GCGC 2 cut(s) 22, 24
GsuI CTGGAG 1 cut(s) 738
HaeIII GGCC 2 cut(s) 396, 574
HapII CCGG 4 cut(s) 129, 193, 393, 570
HhaI GCGC 2 cut(s) 23, 25
Hin1II CATG 3 cut(s) 117, 137, 738
Hin6I GCGC 2 cut(s) 21, 23
HinP1I GCGC 2 cut(s) 21, 23
HincII GTYRAC 1 cut(s) 585
HindII GTYRAC 1 cut(s) 585
HindIII AAGCTT 1 cut(s) 440
HinfI GANTC 4 cut(s) 215, 229, 356, 652
HpaII CCGG 4 cut(s) 129, 193, 393, 570
HphI GGTGA 1 cut(s) 761
Hpy166II GTNNAC 2 cut(s) 585, 823
Hpy188I TCNGA 2 cut(s) 355, 790
Hpy188III TCNNGA 5 cut(s) 269, 365, 379, 479, 717
Hpy8I GTNNAC 2 cut(s) 585, 823
HpyCH4IV ACGT 1 cut(s) 743
HpyCH4V TGCA 4 cut(s) 4, 117, 622, 670
HpyF10VI GCNNNNNNNGC 4 cut(s) 114, 123, 345, 619
HpyF3I CTNAG 3 cut(s) 335, 698, 787
HpySE526I ACGT 1 cut(s) 743
Hsp92II CATG 3 cut(s) 117, 137, 738
HspAI GCGC 2 cut(s) 21, 23
Kzo9I GATC 1 cut(s) 43
LmnI GCTCC 1 cut(s) 175
LweI GCATC 4 cut(s) 13, 43, 357, 631
MaeI CTAG 2 cut(s) 479, 555
MaeII ACGT 1 cut(s) 743
MaeIII GTNAC 3 cut(s) 245, 328, 749
MalI GATC 1 cut(s) 45
MboI GATC 1 cut(s) 43
MboII GAAGA 4 cut(s) 200, 224, 381, 691
MfeI CAATTG 1 cut(s) 452
MflI RGATCY 1 cut(s) 43
MlyI GAGTC 1 cut(s) 224
MmeI TCCRAC 1 cut(s) 751
MnlI CCTC 9 cut(s) 73, 161, 196, 246, 284, 361, 526, 670, 738
Mph1103I ATGCAT 1 cut(s) 6
MseI TTAA 3 cut(s) 36, 545, 686
MslI CAYNNNNRTG 1 cut(s) 627
MspI CCGG 4 cut(s) 129, 193, 393, 570
MspR9I CCNGG 2 cut(s) 194, 571
MunI CAATTG 1 cut(s) 452
MvnI CGCG 1 cut(s) 23
MwoI GCNNNNNNNGC 4 cut(s) 114, 123, 345, 619
NciI CCSGG 2 cut(s) 194, 571
NdeII GATC 1 cut(s) 43
NheI GCTAGC 1 cut(s) 554
NlaIII CATG 3 cut(s) 117, 137, 738
NmuCI GTSAC 2 cut(s) 328, 749
NsiI ATGCAT 1 cut(s) 6
NspV TTCGAA 1 cut(s) 677
PauI GCGCGC 1 cut(s) 21
PfeI GAWTC 3 cut(s) 229, 356, 652
PflMI CCANNNNNTGG 1 cut(s) 409
PinAI ACCGGT 1 cut(s) 128
PleI GAGTC 1 cut(s) 223
PpsI GAGTC 1 cut(s) 223
Ppu21I YACGTR 1 cut(s) 744
PspEI GGTNACC 1 cut(s) 245
PspPI GGNCC 3 cut(s) 148, 281, 572
PsrI GAACNNNNNNTAC 2 cut(s) 804, 836
PsuI RGATCY 1 cut(s) 43
PteI GCGCGC 1 cut(s) 21
RsaI GTAC 1 cut(s) 742
RsaNI GTAC 1 cut(s) 741
RseI CAYNNNNRTG 1 cut(s) 627
SaqAI TTAA 3 cut(s) 36, 545, 686
Sau3AI GATC 1 cut(s) 43
Sau96I GGNCC 3 cut(s) 148, 281, 572
SchI GAGTC 1 cut(s) 224
ScrFI CCNGG 2 cut(s) 194, 571
SetI ASST 7 cut(s) 153, 172, 238, 252, 276, 444, 746
SfaNI GCATC 4 cut(s) 13, 43, 357, 631
SfuI TTCGAA 1 cut(s) 677
SinI GGWCC 2 cut(s) 148, 281
SmiMI CAYNNNNRTG 1 cut(s) 627
SmlI CTYRAG 1 cut(s) 729
SmoI CTYRAG 1 cut(s) 729
SsiI CCGC 3 cut(s) 124, 154, 515
SspI AATATT 1 cut(s) 795
SspMI CTAG 2 cut(s) 479, 555
StyD4I CCNGG 2 cut(s) 192, 569
TaiI ACGT 1 cut(s) 746
TaqI TCGA 5 cut(s) 7, 51, 186, 677, 838
TfiI GAWTC 3 cut(s) 229, 356, 652
Tru1I TTAA 3 cut(s) 36, 545, 686
Tru9I TTAA 3 cut(s) 36, 545, 686
TseFI GTSAC 2 cut(s) 328, 749
Tsp45I GTSAC 2 cut(s) 328, 749
TspDTI ATGAA 4 cut(s) 102, 225, 552, 645
TspGWI ACGGA 1 cut(s) 570
Van91I CCANNNNNTGG 1 cut(s) 409
VpaK11BI GGWCC 2 cut(s) 148, 281
XapI RAATTY 3 cut(s) 429, 466, 722
XbaI TCTAGA 1 cut(s) 478
XspI CTAG 2 cut(s) 479, 555
Zsp2I ATGCAT 1 cut(s) 6
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.