MD03G1154300.v1.1

beta-glucosidase activity

Basic Information

Type: gene
Biological Identity
malus_domestica
Chr03
Physical Location & Seq
Forward (+)
17702122 .. 17702618
497 bp
Loading structure...
UTR
Exon/CDS
Intron
MD03G1154300.v1.1.491

Sequence Viewer

Length: 261 bp
ATGAAGGCGCAACGGAAGATTGACATCTTTGCTGACTTTTATGTTCGGCCCGAGGATGAGTTGATCGAGTCCCTTCATCGATTATGGTGGAGAAGGGTCAGTCGGTCCTTCAGGTGTCTGCCTCCCAGCTTCCTCCGGACACGCCGATCGAGTATGTGGATCCCCTTGAGGATGCGAGGTTTTACATCTTTACAGAGACGTTGGACCAGACTTTTGGTCGGAGGCCAGGGACATTGTCGGGGGATGGGAAATACCAGGTAG
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
Pfam Domains
Protein Families

Protein Analysis

87

Amino Acids

10.47

Weight (kDa)

11.85

Isoelectric Point (pI)

79.53

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready

Orthologous Genes (Group: OG0000260)

Species Orthologous Gene IDs
fragaria_vesca FvH4_1g01701 FvH4_4g03270
malus_domestica MD00G1017800.v1.1 MD00G1142300.v1.1 MD00G1145500.v1.1 MD00G1191000.v1.1 MD01G1112800.v1.1 MD01G1143700.v1.1 MD02G1048600.v1.1 MD02G1196000.v1.1 MD03G1062700.v1.1 MD03G1095500.v1.1 MD03G1095600.v1.1 MD03G1125500.v1.1 MD03G1154200.v1.1 MD03G1154300.v1.1 MD03G1170400.v1.1 MD03G1179800.v1.1 MD03G1196800.v1.1 MD03G1255700.v1.1 MD04G1029900.v1.1 MD04G1054700.v1.1 MD04G1102500.v1.1 MD04G1142700.v1.1 MD05G1052900.v1.1 MD05G1063000.v1.1 MD05G1069200.v1.1 MD05G1160700.v1.1 MD05G1235500.v1.1 MD05G1285100.v1.1 MD05G1321300.v1.1 MD07G1170900.v1.1 MD08G1072400.v1.1 MD08G1151000.v1.1 MD09G1075100.v1.1 MD11G1004200.v1.1 MD11G1134000.v1.1 MD11G1134100.v1.1 MD11G1150600.v1.1 MD11G1167200.v1.1 MD11G1169500.v1.1 MD11G1191200.v1.1 MD11G1215700.v1.1 MD12G1110400.v1.1 MD12G1226000.v1.1 MD14G1070600.v1.1 MD15G1246900.v1.1 MD15G1271300.v1.1 MD15G1304400.v1.1 MD15G1306500.v1.1 MD15G1394800.v1.1 MD16G1222400.v1.1 MD16G1235600.v1.1 MD16G1275200.v1.1 MD17G1164900.v1.1 MD17G1199400.v1.1 MD17G1200600.v1.1 MD17G1255500.v1.1
prunus_persica Prupe.5G199500_v2.0.a1
pyrus_communis pycom01g05550 pycom01g06510 pycom01g10640 pycom02g04780 pycom02g10380 pycom02g16940 pycom02g21170 pycom02g25250 pycom03g11350 pycom03g15980 pycom03g17500 pycom04g07430 pycom04g11390 pycom05g02890 pycom05g12620 pycom05g21240 pycom06g01740 pycom06g06680 pycom06g08420 pycom07g09890 pycom07g10330 pycom07g13390 pycom07g13400 pycom07g14390 pycom08g04050 pycom08g04060 pycom08g09610 pycom08g14690 pycom09g14670 pycom09g14680 pycom09g19450 pycom10g09940 pycom10g14290 pycom11g03600 pycom11g13710 pycom11g14810 pycom11g17720 pycom12g02240 pycom12g06830 pycom12g09950 pycom12g13060 pycom13g02180 pycom13g07740 pycom13g21900 pycom13g23040 pycom14g10400 pycom14g10410 pycom14g10490 pycom14g10680 pycom14g13340 pycom15g15950 pycom15g31530 pycom15g31550 pycom15g38660 pycom16g08600 pycom16g20570 pycom17g09630 pycom17g09650 pycom17g16800 pycom17g16830 pycom17g24070
rosa_chinensis RchiOBHm_Chr2g0086631
rosa_laevigata RLG00000015768
rosa_multiflora Rmu_co8061662.1_g000001 Rmu_co8118782.1_g000001
rosa_roxburghii Rroxscaffold_2G00154370
rosa_rugosa Rorug01G0468000
rosa_samantha Rh2AG019800 Rh2BG019700 Rh2BG019800 Rh2CG019500 Rh2DG020300
rosa_wichuraiana Rw2G001640

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AccIII TCCGGA 1 cut(s) 135
AclWI GGATC 2 cut(s) 154, 167
AcuI CTGAAG 1 cut(s) 94
AhdI GACNNNNNGTC 1 cut(s) 215
AjnI CCWGG 2 cut(s) 225, 254
AluBI AGCT 1 cut(s) 129
AluI AGCT 1 cut(s) 129
Alw26I GTCTC 1 cut(s) 190
AlwI GGATC 2 cut(s) 154, 167
Ama87I CYCGRG 1 cut(s) 50
Aor13HI TCCGGA 1 cut(s) 135
AoxI GGCC 2 cut(s) 47, 223
ArsI GACNNNNNNTTYG 2 cut(s) 196, 228
AspLEI GCGC 1 cut(s) 10
AspS9I GGNCC 3 cut(s) 48, 105, 204
AvaI CYCGRG 1 cut(s) 50
AvaII GGWCC 2 cut(s) 105, 204
BamHI GGATCC 1 cut(s) 159
BccI CCATC 1 cut(s) 238
BciT130I CCWGG 2 cut(s) 227, 256
BcoDI GTCTC 1 cut(s) 190
Bme1390I CCNGG 2 cut(s) 227, 256
Bme18I GGWCC 2 cut(s) 105, 204
BmeRI GACNNNNNGTC 1 cut(s) 215
BmeT110I CYCGRG 1 cut(s) 50
BmgT120I GGNCC 3 cut(s) 48, 105, 204
BmiI GGNNCC 1 cut(s) 161
BmrFI CCNGG 2 cut(s) 227, 256
BmsI GCATC 1 cut(s) 162
BpuEI CTTGAG 1 cut(s) 187
Bsa29I ATCGAT 1 cut(s) 79
BsaBI GATNNNNATC 1 cut(s) 23
BsaJI CCNNGG 2 cut(s) 51, 226
BsaWI WCCGGW 1 cut(s) 135
Bse8I GATNNNNATC 1 cut(s) 23
BseAI TCCGGA 1 cut(s) 135
BseBI CCWGG 2 cut(s) 227, 256
BseCI ATCGAT 1 cut(s) 79
BseDI CCNNGG 2 cut(s) 51, 226
BseGI GGATG 3 cut(s) 61, 177, 249
BseJI GATNNNNATC 1 cut(s) 23
BseYI CCCAGC 1 cut(s) 125
Bsh1285I CGRYCG 1 cut(s) 149
BshFI GGCC 2 cut(s) 49, 225
BshVI ATCGAT 1 cut(s) 79
BsiEI CGRYCG 1 cut(s) 149
BsiHKCI CYCGRG 1 cut(s) 50
BsiSI CCGG 1 cut(s) 136
BslFI GGGAC 2 cut(s) 55, 243
BsmAI GTCTC 1 cut(s) 190
BsmBI CGTCTC 1 cut(s) 190
BsmFI GGGAC 2 cut(s) 55, 243
BsnI GGCC 2 cut(s) 49, 225
BsoBI CYCGRG 1 cut(s) 50
Bsp13I TCCGGA 1 cut(s) 135
Bsp143I GATC 3 cut(s) 63, 146, 159
BspANI GGCC 2 cut(s) 49, 225
BspDI ATCGAT 1 cut(s) 79
BspEI TCCGGA 1 cut(s) 135
BspLI GGNNCC 1 cut(s) 161
BspPI GGATC 2 cut(s) 154, 167
BssECI CCNNGG 2 cut(s) 51, 226
BssMI GATC 3 cut(s) 63, 146, 159
Bst2UI CCWGG 2 cut(s) 227, 256
BstF5I GGATG 3 cut(s) 61, 177, 249
BstHHI GCGC 1 cut(s) 10
BstKTI GATC 3 cut(s) 66, 149, 162
BstMAI GTCTC 1 cut(s) 190
BstMBI GATC 3 cut(s) 63, 146, 159
BstMCI CGRYCG 1 cut(s) 149
BstNI CCWGG 2 cut(s) 227, 256
BstSCI CCNGG 2 cut(s) 225, 254
BstX2I RGATCY 1 cut(s) 159
BstXI CCANNNNNNTGG 1 cut(s) 214
BstYI RGATCY 1 cut(s) 159
Bsu15I ATCGAT 1 cut(s) 79
BsuRI GGCC 2 cut(s) 49, 225
BsuTUI ATCGAT 1 cut(s) 79
BtsCI GGATG 3 cut(s) 61, 177, 249
CfoI GCGC 1 cut(s) 10
Cfr13I GGNCC 3 cut(s) 48, 105, 204
ClaI ATCGAT 1 cut(s) 79
CsiI ACCWGGT 1 cut(s) 254
CviJI RGCY 3 cut(s) 49, 129, 225
CviKI_1 RGCY 3 cut(s) 49, 129, 225
DpnI GATC 3 cut(s) 65, 148, 161
DpnII GATC 3 cut(s) 63, 146, 159
DriI GACNNNNNGTC 1 cut(s) 215
Eam1105I GACNNNNNGTC 1 cut(s) 215
Eco47I GGWCC 2 cut(s) 105, 204
Eco57I CTGAAG 1 cut(s) 94
Eco88I CYCGRG 1 cut(s) 50
EcoRII CCWGG 2 cut(s) 225, 254
Esp3I CGTCTC 1 cut(s) 190
FaiI YATR 3 cut(s) 42, 85, 155
FaqI GGGAC 2 cut(s) 55, 243
FokI GGATG 3 cut(s) 68, 184, 256
GlaI GCGC 1 cut(s) 9
GsaI CCCAGC 1 cut(s) 129
HaeIII GGCC 2 cut(s) 49, 225
HapII CCGG 1 cut(s) 136
HhaI GCGC 1 cut(s) 10
Hin6I GCGC 1 cut(s) 8
HinP1I GCGC 1 cut(s) 8
HinfI GANTC 1 cut(s) 68
HpaII CCGG 1 cut(s) 136
Hpy188I TCNGA 1 cut(s) 221
Hpy188III TCNNGA 1 cut(s) 136
HpyAV CCTTC 3 cut(s) 83, 87, 118
HpyCH4IV ACGT 1 cut(s) 199
HpySE526I ACGT 1 cut(s) 199
HspAI GCGC 1 cut(s) 8
Kpn2I TCCGGA 1 cut(s) 135
Kzo9I GATC 3 cut(s) 63, 146, 159
LpnPI CCDG 7 cut(s) 97, 139, 149, 212, 220, 239, 241
LweI GCATC 1 cut(s) 162
MabI ACCWGGT 1 cut(s) 254
MaeII ACGT 1 cut(s) 199
MalI GATC 3 cut(s) 65, 148, 161
MboI GATC 3 cut(s) 63, 146, 159
MboII GAAGA 1 cut(s) 28
MflI RGATCY 1 cut(s) 159
MlyI GAGTC 1 cut(s) 77
MmeI TCCRAC 2 cut(s) 182, 199
MnlI CCTC 6 cut(s) 46, 132, 143, 162, 170, 215
MroI TCCGGA 1 cut(s) 135
MspI CCGG 1 cut(s) 136
MspR9I CCNGG 2 cut(s) 227, 256
MvaI CCWGG 2 cut(s) 227, 256
NdeII GATC 3 cut(s) 63, 146, 159
NlaIV GGNNCC 1 cut(s) 161
PflFI GACNNNGTC 1 cut(s) 234
Ple19I CGATCG 1 cut(s) 149
PleI GAGTC 1 cut(s) 76
PpsI GAGTC 1 cut(s) 76
Psp6I CCWGG 2 cut(s) 225, 254
PspFI CCCAGC 1 cut(s) 125
PspGI CCWGG 2 cut(s) 225, 254
PspN4I GGNNCC 1 cut(s) 161
PspPI GGNCC 3 cut(s) 48, 105, 204
PsuI RGATCY 1 cut(s) 159
PsyI GACNNNGTC 1 cut(s) 234
PvuI CGATCG 1 cut(s) 149
Sau3AI GATC 3 cut(s) 63, 146, 159
Sau96I GGNCC 3 cut(s) 48, 105, 204
SchI GAGTC 1 cut(s) 77
ScrFI CCNGG 2 cut(s) 227, 256
SetI ASST 5 cut(s) 116, 131, 181, 202, 260
SexAI ACCWGGT 1 cut(s) 254
SfaNI GCATC 1 cut(s) 162
SinI GGWCC 2 cut(s) 105, 204
SmlI CTYRAG 1 cut(s) 166
SmoI CTYRAG 1 cut(s) 166
StyD4I CCNGG 2 cut(s) 225, 254
TaiI ACGT 1 cut(s) 202
TaqI TCGA 3 cut(s) 66, 79, 149
TaqII GACCGA 1 cut(s) 93
TspDTI ATGAA 2 cut(s) 17, 65
TspGWI ACGGA 1 cut(s) 28
Tth111I GACNNNGTC 1 cut(s) 234
VpaK11BI GGWCC 2 cut(s) 105, 204
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.