MD16G1275200.v1.1

Plant transposase (Ptta/En/Spm family)

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
malus_domestica
Chr16
OG0000260
Physical Location & Seq
Reverse (-)
36814481 .. 36819411
4931 bp
Loading structure...
UTR
Exon/CDS
Intron
MD16G1275200.v1.1.491

Sequence Viewer

Length: 1296 bp
ATGTCGCATTCGATCACTCGTCGCCGGAGTTTGTCCAATGCGGCCCCTGCATTATCAGCATCTACTGCTCCAGGAGTGAGTGCTCCATTGATTGGGGAGCCTACACCCCTTACTGAGGCTACTCCTACGGCATCCCAGGTGCCCGTATCATCAACATCATCAGTGTCAGTTCAGCCCCTCAGTGCACGGCGGCCACACCGGCGCCTCTGCGAGCCGGAGCCTTATGATCACTCTTCCTTGTCCTCCAGAGTCGAGGGTGAGGCCTCCCAACCAGCTAAAAAAAACACCAGGGGGCCCAATCGAATGCTGAAGGAGGCACAGGCTGTACGTTTGTCCGCCTCCTTGATCAAGATTGCATATGACTCGCGATATCTTGGAGCGGCTACCTCACAGCAGCATAGCAGCGTCATTAATAGCTGTGGTTTTGTTATTTGGTATTGTTGTCCTATGCAGTGGAAGAGTTGGGCACAAATTCCCGAGGAGACAAAGGAACTGGTGCAAGACAAGTTGACGGTCAATTTTGATCTTGAGGACATATCCCCTGAGGTCAGTGCCTACTTAGAGGAGACCTTAGCAAACCGGTACAAAGATTGGAAGTGTGCTTTTCACAAGCATTTTCAGCTATGGGATGATCCGGAGATTGCTCGCCTACAGGGTTGCCCAGCTGAGTTGAAGGACCGGCTGGAGGATTGGGAGTGGCTCTGCAAATATTTTACGGACCCAAAATTTGTGAAATCTGTTGCTGGCAAGAAAGCTCGGGACTCAAAGACACTTCTCCACCATTCCGGTTCAAAGCCCTTTTCGTATAGGCTTGAGGCACGACGTCAGGGTTCTAAGTTCCTACAGATTGACCTGTTCAAGGATGTTTACATTCGACCCGGCAAAGAGATCGCTGAGCAGCTTCTTGAAAAGAGCACTGCTATTCTCCAAGAAGCAACATCGCAGCTTCCGCCAGAGACCTCGATCGAGGACGTCATTGTACCCGAGGATGCAGATCTTAAGATCGTGACTGAGGTCCTGGATCAGAAGTTGGGTCGTTGTCATGGCAAGGTTGTTCGGTGTATGGGGAAGGCGGGGGTTCGTGAGACGGGTGCATCCTCTTCCATATCGTCCACATTAGAGGTCAATTCCCTGAAGGAGGAAGTGACAACCTTAAGAGGTCAGCTTGTGGCCCAGAACGAGAGGATGAATATGATTGTTCAGGCCTTAGCGATGTCCGGCCTCCAAATCTCGATGCCAGAACCTAATCTTGCTCCACCTTCGACTTCTCAGCCACTTCGCCCAGCTGATACCTAG
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
Transposase_24

Protein Analysis

432

Amino Acids

47.8

Weight (kDa)

7.58

Isoelectric Point (pI)

53.14

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes (Group: OG0000260)

Species Orthologous Gene IDs
fragaria_vesca FvH4_1g01701 FvH4_4g03270
malus_domestica MD00G1017800.v1.1 MD00G1142300.v1.1 MD00G1145500.v1.1 MD00G1191000.v1.1 MD01G1112800.v1.1 MD01G1143700.v1.1 MD02G1048600.v1.1 MD02G1196000.v1.1 MD03G1062700.v1.1 MD03G1095500.v1.1 MD03G1095600.v1.1 MD03G1125500.v1.1 MD03G1154200.v1.1 MD03G1154300.v1.1 MD03G1170400.v1.1 MD03G1179800.v1.1 MD03G1196800.v1.1 MD03G1255700.v1.1 MD04G1029900.v1.1 MD04G1054700.v1.1 MD04G1102500.v1.1 MD04G1142700.v1.1 MD05G1052900.v1.1 MD05G1063000.v1.1 MD05G1069200.v1.1 MD05G1160700.v1.1 MD05G1235500.v1.1 MD05G1285100.v1.1 MD05G1321300.v1.1 MD07G1170900.v1.1 MD08G1072400.v1.1 MD08G1151000.v1.1 MD09G1075100.v1.1 MD11G1004200.v1.1 MD11G1134000.v1.1 MD11G1134100.v1.1 MD11G1150600.v1.1 MD11G1167200.v1.1 MD11G1169500.v1.1 MD11G1191200.v1.1 MD11G1215700.v1.1 MD12G1110400.v1.1 MD12G1226000.v1.1 MD14G1070600.v1.1 MD15G1246900.v1.1 MD15G1271300.v1.1 MD15G1304400.v1.1 MD15G1306500.v1.1 MD15G1394800.v1.1 MD16G1222400.v1.1 MD16G1235600.v1.1 MD16G1275200.v1.1 MD17G1164900.v1.1 MD17G1199400.v1.1 MD17G1200600.v1.1 MD17G1255500.v1.1
prunus_persica Prupe.5G199500_v2.0.a1
pyrus_communis pycom01g05550 pycom01g06510 pycom01g10640 pycom02g04780 pycom02g10380 pycom02g16940 pycom02g21170 pycom02g25250 pycom03g11350 pycom03g15980 pycom03g17500 pycom04g07430 pycom04g11390 pycom05g02890 pycom05g12620 pycom05g21240 pycom06g01740 pycom06g06680 pycom06g08420 pycom07g09890 pycom07g10330 pycom07g13390 pycom07g13400 pycom07g14390 pycom08g04050 pycom08g04060 pycom08g09610 pycom08g14690 pycom09g14670 pycom09g14680 pycom09g19450 pycom10g09940 pycom10g14290 pycom11g03600 pycom11g13710 pycom11g14810 pycom11g17720 pycom12g02240 pycom12g06830 pycom12g09950 pycom12g13060 pycom13g02180 pycom13g07740 pycom13g21900 pycom13g23040 pycom14g10400 pycom14g10410 pycom14g10490 pycom14g10680 pycom14g13340 pycom15g15950 pycom15g31530 pycom15g31550 pycom15g38660 pycom16g08600 pycom16g20570 pycom17g09630 pycom17g09650 pycom17g16800 pycom17g16830 pycom17g24070
rosa_chinensis RchiOBHm_Chr2g0086631
rosa_laevigata RLG00000015768
rosa_multiflora Rmu_co8061662.1_g000001 Rmu_co8118782.1_g000001
rosa_roxburghii Rroxscaffold_2G00154370
rosa_rugosa Rorug01G0468000
rosa_samantha Rh2AG019800 Rh2BG019700 Rh2BG019800 Rh2CG019500 Rh2DG020300
rosa_wichuraiana Rw2G001640

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AatII GACGTC 2 cut(s) 826, 975
AccB1I GGYRCC 2 cut(s) 139, 201
AccB7I CCANNNNNTGG 1 cut(s) 92
AccBSI CCGCTC 1 cut(s) 380
AccII CGCG 1 cut(s) 367
AccIII TCCGGA 1 cut(s) 634
AciI CCGC 6 cut(s) 41, 190, 336, 380, 950, 1073
AclWI GGATC 2 cut(s) 626, 1029
AcoI YGGCCR 1 cut(s) 191
AcsI RAATTY 2 cut(s) 471, 725
AcuI CTGAAG 2 cut(s) 329, 1154
AcyI GRCGYC 3 cut(s) 202, 823, 972
AfaI GTAC 3 cut(s) 327, 584, 981
AfiI CCNNNNNNNGG 5 cut(s) 92, 115, 685, 859, 1138
AflII CTTAAG 2 cut(s) 998, 1153
AgeI ACCGGT 1 cut(s) 579
AgsI TTSAA 4 cut(s) 673, 792, 859, 908
AjnI CCWGG 4 cut(s) 70, 135, 287, 1017
AluBI AGCT 9 cut(s) 275, 417, 622, 665, 755, 901, 946, 1165, 1286
AluI AGCT 9 cut(s) 275, 417, 622, 665, 755, 901, 946, 1165, 1286
Alw21I GWGCWC 3 cut(s) 85, 187, 917
Alw26I GTCTC 4 cut(s) 476, 560, 950, 1079
Alw44I GTGCAC 1 cut(s) 183
AlwI GGATC 2 cut(s) 626, 1029
Ama87I CYCGRG 3 cut(s) 476, 756, 983
Aor13HI TCCGGA 1 cut(s) 634
AoxI GGCC 7 cut(s) 42, 191, 261, 293, 1170, 1203, 1219
ApaI GGGCCC 1 cut(s) 297
ApaLI GTGCAC 1 cut(s) 183
ApeKI GCWGC 4 cut(s) 394, 402, 898, 943
ApoI RAATTY 2 cut(s) 471, 725
ArsI GACNNNNNNTTYG 2 cut(s) 710, 742
AseI ATTAAT 1 cut(s) 411
AsiGI ACCGGT 1 cut(s) 579
AspLEI GCGC 1 cut(s) 204
AspS9I GGNCC 7 cut(s) 43, 293, 294, 676, 718, 1015, 1171
AsuC2I CCSGG 1 cut(s) 879
AsuHPI GGTGA 1 cut(s) 269
AvaI CYCGRG 3 cut(s) 476, 756, 983
AvaII GGWCC 3 cut(s) 676, 718, 1015
AxyI CCTNAGG 1 cut(s) 543
BaeGI GKGCMC 4 cut(s) 144, 187, 297, 469
BanI GGYRCC 2 cut(s) 139, 201
BanII GRGCYC 1 cut(s) 297
Bbv12I GWGCWC 3 cut(s) 85, 187, 917
BbvI GCAGC 4 cut(s) 406, 414, 910, 955
BceAI ACGGC 2 cut(s) 144, 203
BcgI CGANNNNNNTGC 4 cut(s) 345, 379, 871, 905
BciT130I CCWGG 4 cut(s) 72, 137, 289, 1019
BclI TGATCA 2 cut(s) 226, 345
BcnI CCSGG 1 cut(s) 879
BcoDI GTCTC 4 cut(s) 476, 560, 950, 1079
BfaI CTAG 1 cut(s) 1294
BfmI CTRYAG 2 cut(s) 650, 842
BfoI RGCGCY 1 cut(s) 205
BfrI CTTAAG 2 cut(s) 998, 1153
BglI GCCNNNNNGGC 1 cut(s) 199
BglII AGATCT 1 cut(s) 994
BisI GCNGC 7 cut(s) 42, 191, 381, 395, 403, 899, 944
BlpI GCTNAGC 1 cut(s) 894
BlsI GCNGC 7 cut(s) 43, 192, 382, 396, 404, 900, 945
Bme1390I CCNGG 5 cut(s) 72, 137, 289, 879, 1019
Bme18I GGWCC 3 cut(s) 676, 718, 1015
BmeT110I CYCGRG 3 cut(s) 476, 756, 983
BmgT120I GGNCC 7 cut(s) 43, 293, 294, 676, 718, 1015, 1171
BmiI GGNNCC 8 cut(s) 45, 99, 141, 203, 219, 294, 295, 720
BmrFI CCNGG 5 cut(s) 72, 137, 289, 879, 1019
BmsI GCATC 5 cut(s) 68, 140, 979, 1103, 1224
BoxI GACNNNNGTC 1 cut(s) 1013
BpmI CTGGAG 3 cut(s) 54, 229, 704
Bpu10I CCTNAGC 2 cut(s) 571, 1207
Bpu1102I GCTNAGC 1 cut(s) 894
BpuEI CTTGAG 2 cut(s) 548, 833
BpuMI CCSGG 1 cut(s) 879
BsaBI GATNNNNATC 1 cut(s) 993
BsaHI GRCGYC 3 cut(s) 202, 823, 972
BsaI GGTCTC 2 cut(s) 560, 950
BsaJI CCNNGG 4 cut(s) 135, 288, 477, 984
BsaWI WCCGGW 3 cut(s) 579, 634, 785
Bsc4I CCNNNNNNNGG 5 cut(s) 92, 115, 685, 859, 1138
Bse118I RCCGGY 3 cut(s) 198, 579, 678
Bse1I ACTGG 1 cut(s) 498
Bse21I CCTNAGG 1 cut(s) 543
Bse8I GATNNNNATC 1 cut(s) 993
BseAI TCCGGA 1 cut(s) 634
BseBI CCWGG 4 cut(s) 72, 137, 289, 1019
BseDI CCNNGG 4 cut(s) 135, 288, 477, 984
BseGI GGATG 6 cut(s) 131, 634, 868, 994, 1094, 1191
BseJI GATNNNNATC 1 cut(s) 993
BseLI CCNNNNNNNGG 5 cut(s) 92, 115, 685, 859, 1138
BseMII CTCAG 7 cut(s) 105, 193, 534, 657, 885, 1002, 1283
BseNI ACTGG 1 cut(s) 498
BseRI GAGGAG 2 cut(s) 494, 578
BseSI GKGCMC 4 cut(s) 144, 187, 297, 469
BseXI GCAGC 4 cut(s) 406, 414, 910, 955
BseYI CCCAGC 2 cut(s) 661, 1282
Bsh1236I CGCG 1 cut(s) 367
Bsh1285I CGRYCG 1 cut(s) 966
BshFI GGCC 7 cut(s) 44, 193, 263, 295, 1172, 1205, 1221
BshNI GGYRCC 2 cut(s) 139, 201
BshTI ACCGGT 1 cut(s) 579
BsiEI CGRYCG 1 cut(s) 966
BsiHKAI GWGCWC 3 cut(s) 85, 187, 917
BsiHKCI CYCGRG 3 cut(s) 476, 756, 983
BsiSI CCGG 9 cut(s) 25, 199, 215, 580, 635, 679, 786, 879, 1218
BslFI GGGAC 1 cut(s) 773
BslI CCNNNNNNNGG 5 cut(s) 92, 115, 685, 859, 1138
BsmAI GTCTC 4 cut(s) 476, 560, 950, 1079
BsmBI CGTCTC 1 cut(s) 1079
BsmFI GGGAC 1 cut(s) 773
BsmI GAATGC 2 cut(s) 7, 309
BsnI GGCC 7 cut(s) 44, 193, 263, 295, 1172, 1205, 1221
Bso31I GGTCTC 2 cut(s) 560, 950
BsoBI CYCGRG 3 cut(s) 476, 756, 983
Bsp120I GGGCCC 1 cut(s) 293
Bsp1286I GDGCHC 6 cut(s) 85, 144, 187, 297, 469, 917
Bsp13I TCCGGA 1 cut(s) 634
Bsp1720I GCTNAGC 1 cut(s) 894
Bsp68I TCGCGA 1 cut(s) 367
BspACI CCGC 6 cut(s) 41, 190, 336, 380, 950, 1073
BspANI GGCC 7 cut(s) 44, 193, 263, 295, 1172, 1205, 1221
BspCNI CTCAG 7 cut(s) 106, 192, 535, 658, 886, 1003, 1282
BspEI TCCGGA 1 cut(s) 634
BspFNI CGCG 1 cut(s) 367
BspLI GGNNCC 8 cut(s) 45, 99, 141, 203, 219, 294, 295, 720
BspPI GGATC 2 cut(s) 626, 1029
BspT107I GGYRCC 2 cut(s) 139, 201
BspTI CTTAAG 2 cut(s) 998, 1153
BspTNI GGTCTC 2 cut(s) 560, 950
BsrBI CCGCTC 1 cut(s) 380
BsrFI RCCGGY 3 cut(s) 198, 579, 678
BsrI ACTGG 1 cut(s) 498
BssAI RCCGGY 3 cut(s) 198, 579, 678
BssECI CCNNGG 4 cut(s) 135, 288, 477, 984
BssNI GRCGYC 3 cut(s) 202, 823, 972
Bst2UI CCWGG 4 cut(s) 72, 137, 289, 1019
Bst4CI ACNGT 1 cut(s) 514
Bst6I CTCTTC 3 cut(s) 238, 452, 1105
BstACI GRCGYC 3 cut(s) 202, 823, 972
BstAFI CTTAAG 2 cut(s) 998, 1153
BstAPI GCANNNNNTGC 1 cut(s) 65
BstC8I GCNNGC 3 cut(s) 212, 646, 745
BstENI CCTNNNNNAGG 3 cut(s) 113, 857, 1136
BstF5I GGATG 6 cut(s) 131, 634, 868, 994, 1094, 1191
BstFNI CGCG 1 cut(s) 367
BstH2I RGCGCY 1 cut(s) 205
BstHHI GCGC 1 cut(s) 204
BstMAI GTCTC 4 cut(s) 476, 560, 950, 1079
BstMCI CGRYCG 1 cut(s) 966
BstMWI GCNNNNNNNGC 6 cut(s) 47, 56, 65, 199, 619, 949
BstNI CCWGG 4 cut(s) 72, 137, 289, 1019
BstPAI GACNNNNGTC 1 cut(s) 1013
BstSCI CCNGG 5 cut(s) 70, 135, 287, 877, 1017
BstSFI CTRYAG 2 cut(s) 650, 842
BstSLI GKGCMC 4 cut(s) 144, 187, 297, 469
BstUI CGCG 1 cut(s) 367
BstV1I GCAGC 4 cut(s) 406, 414, 910, 955
BstX2I RGATCY 1 cut(s) 994
BstYI RGATCY 1 cut(s) 994
Bsu36I CCTNAGG 1 cut(s) 543
BsuRI GGCC 7 cut(s) 44, 193, 263, 295, 1172, 1205, 1221
BtgZI GCGATG 2 cut(s) 924, 1226
BtsCI GGATG 6 cut(s) 131, 634, 868, 994, 1094, 1191
BtsI GCAGTG 2 cut(s) 458, 915
BtsIMutI CAGTG 5 cut(s) 168, 187, 458, 556, 915
BtuMI TCGCGA 1 cut(s) 367
Cac8I GCNNGC 3 cut(s) 212, 646, 745
CfoI GCGC 1 cut(s) 204
Cfr10I RCCGGY 3 cut(s) 198, 579, 678
Cfr13I GGNCC 7 cut(s) 43, 293, 294, 676, 718, 1015, 1171
CseI GACGC 1 cut(s) 394
Csp6I GTAC 3 cut(s) 326, 583, 980
CspAI ACCGGT 1 cut(s) 579
CviAII CATG 1 cut(s) 1043
CviQI GTAC 3 cut(s) 326, 583, 980
DinI GGCGCC 1 cut(s) 203
EaeI YGGCCR 1 cut(s) 191
Eam1104I CTCTTC 3 cut(s) 238, 452, 1105
EarI CTCTTC 3 cut(s) 238, 452, 1105
EciI GGCGGA 2 cut(s) 325, 939
Eco147I AGGCCT 2 cut(s) 263, 1205
Eco24I GRGCYC 1 cut(s) 297
Eco31I GGTCTC 2 cut(s) 560, 950
Eco32I GATATC 1 cut(s) 371
Eco47I GGWCC 3 cut(s) 676, 718, 1015
Eco57I CTGAAG 2 cut(s) 329, 1154
Eco81I CCTNAGG 1 cut(s) 543
Eco88I CYCGRG 3 cut(s) 476, 756, 983
EcoNI CCTNNNNNAGG 3 cut(s) 113, 857, 1136
EcoO109I RGGNCCY 2 cut(s) 293, 1015
EcoRII CCWGG 4 cut(s) 70, 135, 287, 1017
EcoRV GATATC 1 cut(s) 371
EcoT38I GRGCYC 1 cut(s) 297
EgeI GGCGCC 1 cut(s) 203
EheI GGCGCC 1 cut(s) 203
Esp3I CGTCTC 1 cut(s) 1079
FaeI CATG 1 cut(s) 1046
FaqI GGGAC 1 cut(s) 773
FatI CATG 1 cut(s) 1042
FauI CCCGC 1 cut(s) 1066
FauNDI CATATG 1 cut(s) 358
FbaI TGATCA 2 cut(s) 226, 345
Fnu4HI GCNGC 7 cut(s) 42, 191, 381, 395, 403, 899, 944
FokI GGATG 6 cut(s) 118, 641, 875, 1001, 1081, 1198
FriOI GRGCYC 1 cut(s) 297
Fsp4HI GCNGC 7 cut(s) 42, 191, 381, 395, 403, 899, 944
FspBI CTAG 1 cut(s) 1294
GlaI GCGC 1 cut(s) 203
GluI GCNGC 7 cut(s) 42, 191, 381, 395, 403, 899, 944
GsaI CCCAGC 2 cut(s) 665, 1286
GsuI CTGGAG 3 cut(s) 54, 229, 704
HaeII RGCGCY 1 cut(s) 205
HaeIII GGCC 7 cut(s) 44, 193, 263, 295, 1172, 1205, 1221
HapII CCGG 9 cut(s) 25, 199, 215, 580, 635, 679, 786, 879, 1218
HgaI GACGC 1 cut(s) 394
HhaI GCGC 1 cut(s) 204
Hin1I GRCGYC 3 cut(s) 202, 823, 972
Hin1II CATG 1 cut(s) 1046
Hin6I GCGC 1 cut(s) 202
HinP1I GCGC 1 cut(s) 202
HincII GTYRAC 1 cut(s) 510
HindII GTYRAC 1 cut(s) 510
HinfI GANTC 3 cut(s) 249, 362, 761
HpaII CCGG 9 cut(s) 25, 199, 215, 580, 635, 679, 786, 879, 1218
HphI GGTGA 1 cut(s) 269
Hpy166II GTNNAC 4 cut(s) 185, 510, 868, 1113
Hpy188I TCNGA 1 cut(s) 1026
Hpy8I GTNNAC 4 cut(s) 185, 510, 868, 1113
Hpy99I CGWCG 2 cut(s) 24, 825
HpyAV CCTTC 5 cut(s) 304, 667, 1063, 1129, 1269
HpyCH4III ACNGT 1 cut(s) 514
HpyCH4IV ACGT 3 cut(s) 328, 823, 972
HpyCH4V TGCA 8 cut(s) 50, 185, 356, 451, 499, 705, 992, 1094
HpyF10VI GCNNNNNNNGC 6 cut(s) 47, 56, 65, 199, 619, 949
HpySE526I ACGT 3 cut(s) 328, 823, 972
Hsp92I GRCGYC 3 cut(s) 202, 823, 972
Hsp92II CATG 1 cut(s) 1046
HspAI GCGC 1 cut(s) 202
KasI GGCGCC 1 cut(s) 201
Kpn2I TCCGGA 1 cut(s) 634
Ksp22I TGATCA 2 cut(s) 226, 345
LmnI GCTCC 6 cut(s) 73, 88, 97, 217, 377, 1258
Lsp1109I GCAGC 4 cut(s) 406, 414, 910, 955
LweI GCATC 5 cut(s) 68, 140, 979, 1103, 1224
MaeI CTAG 1 cut(s) 1294
MaeII ACGT 3 cut(s) 328, 823, 972
MaeIII GTNAC 2 cut(s) 1006, 1144
MbiI CCGCTC 1 cut(s) 380
MboII GAAGA 3 cut(s) 225, 469, 1092
MflI RGATCY 1 cut(s) 994
MhlI GDGCHC 6 cut(s) 85, 144, 187, 297, 469, 917
MluCI AATT 4 cut(s) 471, 517, 725, 1126
Mly113I GGCGCC 1 cut(s) 202
MlyI GAGTC 3 cut(s) 258, 356, 755
MroI TCCGGA 1 cut(s) 634
MseI TTAA 3 cut(s) 411, 999, 1154
MspA1I CMGCKG 2 cut(s) 665, 1286
MspCI CTTAAG 2 cut(s) 998, 1153
MspI CCGG 9 cut(s) 25, 199, 215, 580, 635, 679, 786, 879, 1218
MspR9I CCNGG 5 cut(s) 72, 137, 289, 879, 1019
Mva1269I GAATGC 2 cut(s) 7, 309
MvaI CCWGG 4 cut(s) 72, 137, 289, 1019
MvnI CGCG 1 cut(s) 367
MwoI GCNNNNNNNGC 6 cut(s) 47, 56, 65, 199, 619, 949
NarI GGCGCC 1 cut(s) 202
NciI CCSGG 1 cut(s) 879
NdeI CATATG 1 cut(s) 358
NlaIII CATG 1 cut(s) 1046
NlaIV GGNNCC 8 cut(s) 45, 99, 141, 203, 219, 294, 295, 720
NmuCI GTSAC 2 cut(s) 1006, 1144
NruI TCGCGA 1 cut(s) 367
PceI AGGCCT 2 cut(s) 263, 1205
PctI GAATGC 2 cut(s) 7, 309
PflMI CCANNNNNTGG 1 cut(s) 92
PfoI TCCNGGA 2 cut(s) 70, 1017
PinAI ACCGGT 1 cut(s) 579
PkrI GCNGC 7 cut(s) 43, 192, 382, 396, 404, 900, 945
Ple19I CGATCG 1 cut(s) 966
PleI GAGTC 3 cut(s) 257, 356, 755
PluTI GGCGCC 1 cut(s) 205
PpsI GAGTC 3 cut(s) 257, 356, 755
PpuMI RGGWCCY 1 cut(s) 1015
PshAI GACNNNNGTC 1 cut(s) 1013
PshBI ATTAAT 1 cut(s) 411
Psp5II RGGWCCY 1 cut(s) 1015
Psp6I CCWGG 4 cut(s) 70, 135, 287, 1017
PspFI CCCAGC 2 cut(s) 661, 1282
PspGI CCWGG 4 cut(s) 70, 135, 287, 1017
PspN4I GGNNCC 8 cut(s) 45, 99, 141, 203, 219, 294, 295, 720
PspOMI GGGCCC 1 cut(s) 293
PspPI GGNCC 7 cut(s) 43, 293, 294, 676, 718, 1015, 1171
PspPPI RGGWCCY 1 cut(s) 1015
PsuI RGATCY 1 cut(s) 994
PvuI CGATCG 1 cut(s) 966
PvuII CAGCTG 2 cut(s) 665, 1286
RruI TCGCGA 1 cut(s) 367
RsaI GTAC 3 cut(s) 327, 584, 981
RsaNI GTAC 3 cut(s) 326, 583, 980
SaqAI TTAA 3 cut(s) 411, 999, 1154
SatI GCNGC 7 cut(s) 42, 191, 381, 395, 403, 899, 944
Sau96I GGNCC 7 cut(s) 43, 293, 294, 676, 718, 1015, 1171
SchI GAGTC 3 cut(s) 258, 356, 755
ScrFI CCNGG 5 cut(s) 72, 137, 289, 879, 1019
SduI GDGCHC 6 cut(s) 85, 144, 187, 297, 469, 917
SfaNI GCATC 5 cut(s) 68, 140, 979, 1103, 1224
SfcI CTRYAG 2 cut(s) 650, 842
SfoI GGCGCC 1 cut(s) 203
SgrAI CRCCGGYG 1 cut(s) 198
SinI GGWCC 3 cut(s) 676, 718, 1015
SmlI CTYRAG 4 cut(s) 527, 812, 998, 1153
SmoI CTYRAG 4 cut(s) 527, 812, 998, 1153
Sse9I AATT 4 cut(s) 471, 517, 725, 1126
SseBI AGGCCT 2 cut(s) 263, 1205
SsiI CCGC 6 cut(s) 41, 190, 336, 380, 950, 1073
SspDI GGCGCC 1 cut(s) 201
SspI AATATT 1 cut(s) 710
SspMI CTAG 1 cut(s) 1294
StuI AGGCCT 2 cut(s) 263, 1205
StyD4I CCNGG 5 cut(s) 70, 135, 287, 877, 1017
TaaI ACNGT 1 cut(s) 514
TaiI ACGT 3 cut(s) 331, 826, 975
TaqI TCGA 8 cut(s) 11, 252, 301, 874, 962, 966, 1232, 1262
TasI AATT 4 cut(s) 471, 517, 725, 1126
TauI GCSGC 3 cut(s) 44, 193, 383
Tru1I TTAA 3 cut(s) 411, 999, 1154
Tru9I TTAA 3 cut(s) 411, 999, 1154
TscAI CASTG 5 cut(s) 168, 187, 458, 556, 922
TseFI GTSAC 2 cut(s) 1006, 1144
TseI GCWGC 4 cut(s) 394, 402, 898, 943
Tsp45I GTSAC 2 cut(s) 1006, 1144
TspDTI ATGAA 1 cut(s) 1202
TspGWI ACGGA 1 cut(s) 731
TspRI CASTG 5 cut(s) 168, 187, 458, 556, 922
Van91I CCANNNNNTGG 1 cut(s) 92
Vha464I CTTAAG 2 cut(s) 998, 1153
VneI GTGCAC 1 cut(s) 183
VpaK11BI GGWCC 3 cut(s) 676, 718, 1015
VspI ATTAAT 1 cut(s) 411
XagI CCTNNNNNAGG 3 cut(s) 113, 857, 1136
XapI RAATTY 2 cut(s) 471, 725
XspI CTAG 1 cut(s) 1294
ZraI GACGTC 2 cut(s) 824, 973
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.