Plant transposase (Ptta/En/Spm family)
Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AccB1I | GGYRCC | 1 cut(s) | 155 |
| AciI | CCGC | 2 cut(s) | 137, 233 |
| AclWI | GGATC | 1 cut(s) | 93 |
| AcsI | RAATTY | 2 cut(s) | 8, 38 |
| AfaI | GTAC | 1 cut(s) | 127 |
| AfiI | CCNNNNNNNGG | 1 cut(s) | 253 |
| AgsI | TTSAA | 3 cut(s) | 8, 38, 199 |
| AjnI | CCWGG | 2 cut(s) | 237, 258 |
| AloI | GAACNNNNNNTCC | 2 cut(s) | 77, 109 |
| AlwI | GGATC | 1 cut(s) | 93 |
| AoxI | GGCC | 4 cut(s) | 234, 255, 288, 304 |
| ApaI | GGGCCC | 1 cut(s) | 259 |
| ApoI | RAATTY | 2 cut(s) | 8, 38 |
| AspS9I | GGNCC | 3 cut(s) | 235, 255, 256 |
| AsuHPI | GGTGA | 1 cut(s) | 31 |
| BaeGI | GKGCMC | 1 cut(s) | 259 |
| BanI | GGYRCC | 1 cut(s) | 155 |
| BanII | GRGCYC | 1 cut(s) | 259 |
| BciT130I | CCWGG | 2 cut(s) | 239, 260 |
| BisI | GCNGC | 1 cut(s) | 234 |
| BlsI | GCNGC | 1 cut(s) | 235 |
| Bme1390I | CCNGG | 2 cut(s) | 239, 260 |
| BmgT120I | GGNCC | 3 cut(s) | 235, 255, 256 |
| BmiI | GGNNCC | 2 cut(s) | 157, 257 |
| BmrFI | CCNGG | 2 cut(s) | 239, 260 |
| BmsI | GCATC | 2 cut(s) | 43, 312 |
| BoxI | GACNNNNGTC | 1 cut(s) | 77 |
| Bpu10I | CCTNAGC | 1 cut(s) | 292 |
| BsaJI | CCNNGG | 4 cut(s) | 48, 237, 238, 258 |
| Bsc4I | CCNNNNNNNGG | 1 cut(s) | 253 |
| BseBI | CCWGG | 2 cut(s) | 239, 260 |
| BseDI | CCNNGG | 4 cut(s) | 48, 237, 238, 258 |
| BseGI | GGATG | 2 cut(s) | 58, 276 |
| BseLI | CCNNNNNNNGG | 1 cut(s) | 253 |
| BseMII | CTCAG | 1 cut(s) | 66 |
| BseSI | GKGCMC | 1 cut(s) | 259 |
| BseYI | CCCAGC | 1 cut(s) | 357 |
| Bsh1285I | CGRYCG | 1 cut(s) | 100 |
| BshFI | GGCC | 4 cut(s) | 236, 257, 290, 306 |
| BshNI | GGYRCC | 1 cut(s) | 155 |
| BsiEI | CGRYCG | 1 cut(s) | 100 |
| BsiSI | CCGG | 1 cut(s) | 303 |
| BslI | CCNNNNNNNGG | 1 cut(s) | 253 |
| BsnI | GGCC | 4 cut(s) | 236, 257, 290, 306 |
| Bsp120I | GGGCCC | 1 cut(s) | 255 |
| Bsp1286I | GDGCHC | 1 cut(s) | 259 |
| Bsp143I | GATC | 1 cut(s) | 85 |
| BspACI | CCGC | 2 cut(s) | 137, 233 |
| BspANI | GGCC | 4 cut(s) | 236, 257, 290, 306 |
| BspCNI | CTCAG | 1 cut(s) | 67 |
| BspLI | GGNNCC | 2 cut(s) | 157, 257 |
| BspPI | GGATC | 1 cut(s) | 93 |
| BspT107I | GGYRCC | 1 cut(s) | 155 |
| BssECI | CCNNGG | 4 cut(s) | 48, 237, 238, 258 |
| BssMI | GATC | 1 cut(s) | 85 |
| BssT1I | CCWWGG | 1 cut(s) | 48 |
| Bst2UI | CCWGG | 2 cut(s) | 239, 260 |
| Bst6I | CTCTTC | 1 cut(s) | 166 |
| BstC8I | GCNNGC | 1 cut(s) | 327 |
| BstDEI | CTNAG | 3 cut(s) | 75, 218, 292 |
| BstF5I | GGATG | 2 cut(s) | 58, 276 |
| BstKTI | GATC | 1 cut(s) | 88 |
| BstMBI | GATC | 1 cut(s) | 85 |
| BstMCI | CGRYCG | 1 cut(s) | 100 |
| BstNI | CCWGG | 2 cut(s) | 239, 260 |
| BstPAI | GACNNNNGTC | 1 cut(s) | 77 |
| BstSCI | CCNGG | 2 cut(s) | 237, 258 |
| BstSLI | GKGCMC | 1 cut(s) | 259 |
| BsuRI | GGCC | 4 cut(s) | 236, 257, 290, 306 |
| BtgZI | GCGATG | 1 cut(s) | 311 |
| BtsCI | GGATG | 2 cut(s) | 58, 276 |
| Cac8I | GCNNGC | 1 cut(s) | 327 |
| Cfr13I | GGNCC | 3 cut(s) | 235, 255, 256 |
| Csp6I | GTAC | 1 cut(s) | 126 |
| CviAII | CATG | 1 cut(s) | 107 |
| CviJI | RGCY | 5 cut(s) | 236, 257, 290, 306, 361 |
| CviKI_1 | RGCY | 5 cut(s) | 236, 257, 290, 306, 361 |
| CviQI | GTAC | 1 cut(s) | 126 |
| DdeI | CTNAG | 3 cut(s) | 75, 218, 292 |
| DpnI | GATC | 1 cut(s) | 87 |
| DpnII | GATC | 1 cut(s) | 85 |
| Eam1104I | CTCTTC | 1 cut(s) | 166 |
| EarI | CTCTTC | 1 cut(s) | 166 |
| Eco130I | CCWWGG | 1 cut(s) | 48 |
| Eco147I | AGGCCT | 1 cut(s) | 290 |
| Eco24I | GRGCYC | 1 cut(s) | 259 |
| EcoO109I | RGGNCCY | 1 cut(s) | 255 |
| EcoRII | CCWGG | 2 cut(s) | 237, 258 |
| EcoT14I | CCWWGG | 1 cut(s) | 48 |
| EcoT38I | GRGCYC | 1 cut(s) | 259 |
| ErhI | CCWWGG | 1 cut(s) | 48 |
| FaeI | CATG | 1 cut(s) | 110 |
| FaiI | YATR | 3 cut(s) | 108, 179, 278 |
| FatI | CATG | 1 cut(s) | 106 |
| FauI | CCCGC | 1 cut(s) | 130 |
| Fnu4HI | GCNGC | 1 cut(s) | 234 |
| FokI | GGATG | 2 cut(s) | 65, 283 |
| FriOI | GRGCYC | 1 cut(s) | 259 |
| Fsp4HI | GCNGC | 1 cut(s) | 234 |
| GluI | GCNGC | 1 cut(s) | 234 |
| GsaI | CCCAGC | 1 cut(s) | 361 |
| HaeIII | GGCC | 4 cut(s) | 236, 257, 290, 306 |
| HapII | CCGG | 1 cut(s) | 303 |
| Hin1II | CATG | 1 cut(s) | 110 |
| HpaII | CCGG | 1 cut(s) | 303 |
| HphI | GGTGA | 1 cut(s) | 31 |
| Hpy166II | GTNNAC | 1 cut(s) | 126 |
| Hpy188I | TCNGA | 2 cut(s) | 66, 90 |
| Hpy188III | TCNNGA | 3 cut(s) | 146, 168, 316 |
| Hpy8I | GTNNAC | 1 cut(s) | 126 |
| Hpy99I | CGWCG | 2 cut(s) | 105, 322 |
| HpyAV | CCTTC | 3 cut(s) | 127, 193, 357 |
| HpyCH4V | TGCA | 1 cut(s) | 56 |
| HpyF3I | CTNAG | 3 cut(s) | 75, 218, 292 |
| Hsp92II | CATG | 1 cut(s) | 110 |
| Kzo9I | GATC | 1 cut(s) | 85 |
| LmnI | GCTCC | 1 cut(s) | 346 |
| LweI | GCATC | 2 cut(s) | 43, 312 |
| MaeIII | GTNAC | 2 cut(s) | 70, 208 |
| MalI | GATC | 1 cut(s) | 87 |
| MboI | GATC | 1 cut(s) | 85 |
| MboII | GAAGA | 3 cut(s) | 36, 153, 156 |
| MhlI | GDGCHC | 1 cut(s) | 259 |
| MluCI | AATT | 3 cut(s) | 8, 38, 190 |
| MnlI | CCTC | 7 cut(s) | 70, 169, 178, 196, 215, 261, 317 |
| MseI | TTAA | 1 cut(s) | 30 |
| MspI | CCGG | 1 cut(s) | 303 |
| MspR9I | CCNGG | 2 cut(s) | 239, 260 |
| MvaI | CCWGG | 2 cut(s) | 239, 260 |
| NdeII | GATC | 1 cut(s) | 85 |
| NlaIII | CATG | 1 cut(s) | 110 |
| NlaIV | GGNNCC | 2 cut(s) | 157, 257 |
| NmuCI | GTSAC | 2 cut(s) | 70, 208 |
| PasI | CCCWGGG | 1 cut(s) | 238 |
| PceI | AGGCCT | 1 cut(s) | 290 |
| PkrI | GCNGC | 1 cut(s) | 235 |
| PshAI | GACNNNNGTC | 1 cut(s) | 77 |
| Psp6I | CCWGG | 2 cut(s) | 237, 258 |
| PspFI | CCCAGC | 1 cut(s) | 357 |
| PspGI | CCWGG | 2 cut(s) | 237, 258 |
| PspN4I | GGNNCC | 2 cut(s) | 157, 257 |
| PspOMI | GGGCCC | 1 cut(s) | 255 |
| PspPI | GGNCC | 3 cut(s) | 235, 255, 256 |
| RsaI | GTAC | 1 cut(s) | 127 |
| RsaNI | GTAC | 1 cut(s) | 126 |
| SaqAI | TTAA | 1 cut(s) | 30 |
| SatI | GCNGC | 1 cut(s) | 234 |
| Sau3AI | GATC | 1 cut(s) | 85 |
| Sau96I | GGNCC | 3 cut(s) | 235, 255, 256 |
| ScrFI | CCNGG | 2 cut(s) | 239, 260 |
| SduI | GDGCHC | 1 cut(s) | 259 |
| SetI | ASST | 8 cut(s) | 36, 81, 117, 189, 226, 231, 334, 349 |
| SfaNI | GCATC | 2 cut(s) | 43, 312 |
| Sse9I | AATT | 3 cut(s) | 8, 38, 190 |
| SseBI | AGGCCT | 1 cut(s) | 290 |
| SsiI | CCGC | 2 cut(s) | 137, 233 |
| StuI | AGGCCT | 1 cut(s) | 290 |
| StyD4I | CCNGG | 2 cut(s) | 237, 258 |
| StyI | CCWWGG | 1 cut(s) | 48 |
| TaqI | TCGA | 1 cut(s) | 350 |
| TaqII | GACCGA | 1 cut(s) | 86 |
| TasI | AATT | 3 cut(s) | 8, 38, 190 |
| TauI | GCSGC | 1 cut(s) | 236 |
| Tru1I | TTAA | 1 cut(s) | 30 |
| Tru9I | TTAA | 1 cut(s) | 30 |
| TseFI | GTSAC | 2 cut(s) | 70, 208 |
| Tsp45I | GTSAC | 2 cut(s) | 70, 208 |
| TspDTI | ATGAA | 1 cut(s) | 287 |
| XapI | RAATTY | 2 cut(s) | 8, 38 |