MD05G1160700.v1.1

Uncharacterized protein K02A2.6-like

Basic Information

Type: gene
Biological Identity
malus_domestica
Chr05
Physical Location & Seq
Reverse (-)
28933008 .. 28933601
594 bp
Loading structure...
UTR
Exon/CDS
Intron
MD05G1160700.v1.1.491

Sequence Viewer

Length: 210 bp
ATGGGGAAGGCGGGGGTTCGTGAGACGGGTGCATCTTCTTCCAGATCGTCCACAGTAGAGGTCAATTCCCTGAAGGAGGAAGTGACAACCCTAAGAGGTCAGCTTGTGGCCCAGAACGAGAGGATGAATATGATTGTTCAGGCCTTAGCGATGTCTGGCCTCCAAATCCCGATGCCAGAAACTAATCTTGCTCCACCTTCGACTTCTTAG
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families

Protein Analysis

70

Amino Acids

7.29

Weight (kDa)

6.14

Isoelectric Point (pI)

50.96

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready

Orthologous Genes (Group: OG0000260)

Species Orthologous Gene IDs
fragaria_vesca FvH4_1g01701 FvH4_4g03270
malus_domestica MD00G1017800.v1.1 MD00G1142300.v1.1 MD00G1145500.v1.1 MD00G1191000.v1.1 MD01G1112800.v1.1 MD01G1143700.v1.1 MD02G1048600.v1.1 MD02G1196000.v1.1 MD03G1062700.v1.1 MD03G1095500.v1.1 MD03G1095600.v1.1 MD03G1125500.v1.1 MD03G1154200.v1.1 MD03G1154300.v1.1 MD03G1170400.v1.1 MD03G1179800.v1.1 MD03G1196800.v1.1 MD03G1255700.v1.1 MD04G1029900.v1.1 MD04G1054700.v1.1 MD04G1102500.v1.1 MD04G1142700.v1.1 MD05G1052900.v1.1 MD05G1063000.v1.1 MD05G1069200.v1.1 MD05G1160700.v1.1 MD05G1235500.v1.1 MD05G1285100.v1.1 MD05G1321300.v1.1 MD07G1170900.v1.1 MD08G1072400.v1.1 MD08G1151000.v1.1 MD09G1075100.v1.1 MD11G1004200.v1.1 MD11G1134000.v1.1 MD11G1134100.v1.1 MD11G1150600.v1.1 MD11G1167200.v1.1 MD11G1169500.v1.1 MD11G1191200.v1.1 MD11G1215700.v1.1 MD12G1110400.v1.1 MD12G1226000.v1.1 MD14G1070600.v1.1 MD15G1246900.v1.1 MD15G1271300.v1.1 MD15G1304400.v1.1 MD15G1306500.v1.1 MD15G1394800.v1.1 MD16G1222400.v1.1 MD16G1235600.v1.1 MD16G1275200.v1.1 MD17G1164900.v1.1 MD17G1199400.v1.1 MD17G1200600.v1.1 MD17G1255500.v1.1
prunus_persica Prupe.5G199500_v2.0.a1
pyrus_communis pycom01g05550 pycom01g06510 pycom01g10640 pycom02g04780 pycom02g10380 pycom02g16940 pycom02g21170 pycom02g25250 pycom03g11350 pycom03g15980 pycom03g17500 pycom04g07430 pycom04g11390 pycom05g02890 pycom05g12620 pycom05g21240 pycom06g01740 pycom06g06680 pycom06g08420 pycom07g09890 pycom07g10330 pycom07g13390 pycom07g13400 pycom07g14390 pycom08g04050 pycom08g04060 pycom08g09610 pycom08g14690 pycom09g14670 pycom09g14680 pycom09g19450 pycom10g09940 pycom10g14290 pycom11g03600 pycom11g13710 pycom11g14810 pycom11g17720 pycom12g02240 pycom12g06830 pycom12g09950 pycom12g13060 pycom13g02180 pycom13g07740 pycom13g21900 pycom13g23040 pycom14g10400 pycom14g10410 pycom14g10490 pycom14g10680 pycom14g13340 pycom15g15950 pycom15g31530 pycom15g31550 pycom15g38660 pycom16g08600 pycom16g20570 pycom17g09630 pycom17g09650 pycom17g16800 pycom17g16830 pycom17g24070
rosa_chinensis RchiOBHm_Chr2g0086631
rosa_laevigata RLG00000015768
rosa_multiflora Rmu_co8061662.1_g000001 Rmu_co8118782.1_g000001
rosa_roxburghii Rroxscaffold_2G00154370
rosa_rugosa Rorug01G0468000
rosa_samantha Rh2AG019800 Rh2BG019700 Rh2BG019800 Rh2CG019500 Rh2DG020300
rosa_wichuraiana Rw2G001640

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AciI CCGC 1 cut(s) 11
AcuI CTGAAG 1 cut(s) 92
AfiI CCNNNNNNNGG 1 cut(s) 76
AluBI AGCT 1 cut(s) 103
AluI AGCT 1 cut(s) 103
Alw26I GTCTC 1 cut(s) 17
AoxI GGCC 3 cut(s) 108, 141, 157
AspS9I GGNCC 1 cut(s) 109
BcoDI GTCTC 1 cut(s) 17
BmgT120I GGNCC 1 cut(s) 109
BmsI GCATC 2 cut(s) 41, 162
Bpu10I CCTNAGC 1 cut(s) 145
Bsc4I CCNNNNNNNGG 1 cut(s) 76
BseGI GGATG 1 cut(s) 129
BseLI CCNNNNNNNGG 1 cut(s) 76
BshFI GGCC 3 cut(s) 110, 143, 159
BslI CCNNNNNNNGG 1 cut(s) 76
BsmAI GTCTC 1 cut(s) 17
BsmBI CGTCTC 1 cut(s) 17
BsnI GGCC 3 cut(s) 110, 143, 159
Bsp143I GATC 1 cut(s) 44
BspACI CCGC 1 cut(s) 11
BspANI GGCC 3 cut(s) 110, 143, 159
BssMI GATC 1 cut(s) 44
Bst4CI ACNGT 1 cut(s) 55
BstDEI CTNAG 3 cut(s) 92, 145, 207
BstENI CCTNNNNNAGG 1 cut(s) 74
BstF5I GGATG 1 cut(s) 129
BstKTI GATC 1 cut(s) 47
BstMAI GTCTC 1 cut(s) 17
BstMBI GATC 1 cut(s) 44
BsuRI GGCC 3 cut(s) 110, 143, 159
BtgZI GCGATG 1 cut(s) 164
BtsCI GGATG 1 cut(s) 129
Cfr13I GGNCC 1 cut(s) 109
CviJI RGCY 4 cut(s) 103, 110, 143, 159
CviKI_1 RGCY 4 cut(s) 103, 110, 143, 159
DdeI CTNAG 3 cut(s) 92, 145, 207
DpnI GATC 1 cut(s) 46
DpnII GATC 1 cut(s) 44
Eco147I AGGCCT 1 cut(s) 143
Eco57I CTGAAG 1 cut(s) 92
EcoNI CCTNNNNNAGG 1 cut(s) 74
Esp3I CGTCTC 1 cut(s) 17
FaiI YATR 1 cut(s) 131
FauI CCCGC 1 cut(s) 4
FokI GGATG 1 cut(s) 136
HaeIII GGCC 3 cut(s) 110, 143, 159
Hpy166II GTNNAC 1 cut(s) 51
Hpy188III TCNNGA 3 cut(s) 20, 42, 169
Hpy8I GTNNAC 1 cut(s) 51
HpyAV CCTTC 2 cut(s) 67, 207
HpyCH4III ACNGT 1 cut(s) 55
HpyCH4V TGCA 1 cut(s) 32
HpyF3I CTNAG 3 cut(s) 92, 145, 207
Kzo9I GATC 1 cut(s) 44
LmnI GCTCC 1 cut(s) 196
LpnPI CCDG 6 cut(s) 55, 83, 125, 125, 141, 189
LweI GCATC 2 cut(s) 41, 162
MaeIII GTNAC 1 cut(s) 82
MalI GATC 1 cut(s) 46
MboI GATC 1 cut(s) 44
MboII GAAGA 2 cut(s) 27, 30
MluCI AATT 1 cut(s) 64
MnlI CCTC 5 cut(s) 52, 70, 89, 114, 170
NdeII GATC 1 cut(s) 44
NmuCI GTSAC 1 cut(s) 82
PceI AGGCCT 1 cut(s) 143
PspPI GGNCC 1 cut(s) 109
Sau3AI GATC 1 cut(s) 44
Sau96I GGNCC 1 cut(s) 109
SetI ASST 4 cut(s) 63, 100, 105, 199
SfaNI GCATC 2 cut(s) 41, 162
Sse9I AATT 1 cut(s) 64
SseBI AGGCCT 1 cut(s) 143
SsiI CCGC 1 cut(s) 11
StuI AGGCCT 1 cut(s) 143
TaaI ACNGT 1 cut(s) 55
TaqI TCGA 1 cut(s) 200
TasI AATT 1 cut(s) 64
TseFI GTSAC 1 cut(s) 82
Tsp45I GTSAC 1 cut(s) 82
TspDTI ATGAA 1 cut(s) 140
XagI CCTNNNNNAGG 1 cut(s) 74
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.