RchiOBHm_Chr2g0086631

Plant transposase (Ptta/En/Spm family)

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_chinensis
2
OG0000260
Physical Location & Seq
Forward (+)
1699795 .. 1702677
2883 bp
Loading structure...
UTR
Exon/CDS
Intron
PRQ46214

Sequence Viewer

Length: 1527 bp
ATGGAACCCGAAGAGGGTCCCACCGTCACCGCCATCGTCCCCTTCATCCCCACCGCCGCCGCCTCCGCCATTGTCGCCGTCAGCGCCGCAGAATCCGCCGTCGTCACCCTCGCAGCCAACCCACCGTGTCCAACCGACGACTCGGACCCCGATCAATCGGCGGTGACCGGCGGCGGCGGTCTCTCCGAGGATCTCAAACAAAAGCAGATAGATGTGGTTGCGGGTAAGAAGAGGCCCCGTAAGGAGACTAAGTGCACGGCGGTGGGTAAGAAGAGACCCCGGAATGGGACAAAGTCCATGACTGCTCAGACTGCTGACATTAGTACTCAGCACATTGTTCATCAGAGGAGGGCTCGCGGAACTCAGGCCGAAAATGAGGAGGTCACAGAAGTGACTGCATCTTCAACTGGTACTGGTTTAACACAATCAGATGATGTAGTGCCAATAACAAAAGAAAGCAAAAAGAGGAAGAATGGGCCTGGAAAGCGAGGACCATCTACAGGCTCTAAAGCTGAGCAAATTAGGAAAAGAACAGGGAATAGGATTGCTGTCAATCTTGATCCTGAGCATGGAAGGCCGACTGATAAAGGCGTTTCAAGCCTTTTGTCTAATGAGTGTGGGAAGATTGTCAGGGAGAAGTGCCCAATGGTGCATGAAACGTGGACAAAGATTTCCAGGGACGTGAAACATAACCTCAGAAAGGAGGTTGAAGTGAACTTTGAAGTTGATGTACAGCGCCCATCAATTATACATTACTTGAATAAGGTTATGGGTAAGGTGTACAGGGAGTTTAAGTGCGAGTTGCACAAGCACTACAAAAAGATGAGGTCCCTTGAAGAGGCACTTGATAAACCCCCCAAGGCAATGATAGCTAGAAACGATCCAGATCAGTGGAAGTGTTTGTGTAAACATTTCTCAGAGGAAAAGTTTAAGAGGAAAAGTGAAACCAATGCAAAAAATCGAGCTGGAAAGGAGTATGAGCACTGTGGAGGTTCTCGTCCTCATGGTTTATATTTTCAAGATAAAGTTCAGGAGGGTTCAAAGTTTCCCGCAATCGAGACCTTCAGAGTGACTCATCTCAAAAAGGGGAGTAATGAATGGATCAGTAACAAAGCTCAAGAACAATATGATAAGATGATTCTGAAAGAGGAGGCCTATCTACAAGGCTTGGCAGAGAAGCATCCAGATATTCCAATCAAAGAGTTGCCAATATCCCCTGAGGTCGGGATTGAGATTTTAAAGGAGGTACTTGGTGTGAAACCCAAACAACCTGTTCGTGGATTGGGCAGCTTTTGGGTAAATGAGACATCAACCTCCAGCATTATAGAGGAACTGGAGGAAGTTTATGCTGAACTTGAGAGGGAGAGGGCAATTCGGGCTAAAATTCAAGGAATGTTGAATAATGCCTATGAACGACTTAGTCAGCTTGATCCTAATTTTGAAGCGCCACAGCTTCACCTGGTTGATCCTAATATTGAAGCGCCCCAGCTTGACCTGAATGGTGATGAGAAGCATCAAACTCAATAG
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
Transposase_24

Protein Analysis

508

Amino Acids

56.68

Weight (kDa)

8.65

Isoelectric Point (pI)

41.96

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
Transposase_24 PF03004 294 - 432 3.5e-12 Plant transposase (Ptta/En/Spm family)
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes (Group: OG0000260)

Species Orthologous Gene IDs
fragaria_vesca FvH4_1g01701 FvH4_4g03270
malus_domestica MD00G1017800.v1.1 MD00G1142300.v1.1 MD00G1145500.v1.1 MD00G1191000.v1.1 MD01G1112800.v1.1 MD01G1143700.v1.1 MD02G1048600.v1.1 MD02G1196000.v1.1 MD03G1062700.v1.1 MD03G1095500.v1.1 MD03G1095600.v1.1 MD03G1125500.v1.1 MD03G1154200.v1.1 MD03G1154300.v1.1 MD03G1170400.v1.1 MD03G1179800.v1.1 MD03G1196800.v1.1 MD03G1255700.v1.1 MD04G1029900.v1.1 MD04G1054700.v1.1 MD04G1102500.v1.1 MD04G1142700.v1.1 MD05G1052900.v1.1 MD05G1063000.v1.1 MD05G1069200.v1.1 MD05G1160700.v1.1 MD05G1235500.v1.1 MD05G1285100.v1.1 MD05G1321300.v1.1 MD07G1170900.v1.1 MD08G1072400.v1.1 MD08G1151000.v1.1 MD09G1075100.v1.1 MD11G1004200.v1.1 MD11G1134000.v1.1 MD11G1134100.v1.1 MD11G1150600.v1.1 MD11G1167200.v1.1 MD11G1169500.v1.1 MD11G1191200.v1.1 MD11G1215700.v1.1 MD12G1110400.v1.1 MD12G1226000.v1.1 MD14G1070600.v1.1 MD15G1246900.v1.1 MD15G1271300.v1.1 MD15G1304400.v1.1 MD15G1306500.v1.1 MD15G1394800.v1.1 MD16G1222400.v1.1 MD16G1235600.v1.1 MD16G1275200.v1.1 MD17G1164900.v1.1 MD17G1199400.v1.1 MD17G1200600.v1.1 MD17G1255500.v1.1
prunus_persica Prupe.5G199500_v2.0.a1
pyrus_communis pycom01g05550 pycom01g06510 pycom01g10640 pycom02g04780 pycom02g10380 pycom02g16940 pycom02g21170 pycom02g25250 pycom03g11350 pycom03g15980 pycom03g17500 pycom04g07430 pycom04g11390 pycom05g02890 pycom05g12620 pycom05g21240 pycom06g01740 pycom06g06680 pycom06g08420 pycom07g09890 pycom07g10330 pycom07g13390 pycom07g13400 pycom07g14390 pycom08g04050 pycom08g04060 pycom08g09610 pycom08g14690 pycom09g14670 pycom09g14680 pycom09g19450 pycom10g09940 pycom10g14290 pycom11g03600 pycom11g13710 pycom11g14810 pycom11g17720 pycom12g02240 pycom12g06830 pycom12g09950 pycom12g13060 pycom13g02180 pycom13g07740 pycom13g21900 pycom13g23040 pycom14g10400 pycom14g10410 pycom14g10490 pycom14g10680 pycom14g13340 pycom15g15950 pycom15g31530 pycom15g31550 pycom15g38660 pycom16g08600 pycom16g20570 pycom17g09630 pycom17g09650 pycom17g16800 pycom17g16830 pycom17g24070
rosa_chinensis RchiOBHm_Chr2g0086631
rosa_laevigata RLG00000015768
rosa_multiflora Rmu_co8061662.1_g000001 Rmu_co8118782.1_g000001
rosa_roxburghii Rroxscaffold_2G00154370
rosa_rugosa Rorug01G0468000
rosa_samantha Rh2AG019800 Rh2BG019700 Rh2BG019800 Rh2CG019500 Rh2DG020300
rosa_wichuraiana Rw2G001640

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AccII CGCG 1 cut(s) 357
AclWI GGATC 6 cut(s) 198, 554, 875, 1109, 1424, 1460
AcsI RAATTY 1 cut(s) 1383
AcuI CTGAAG 1 cut(s) 1048
AfaI GTAC 5 cut(s) 325, 412, 732, 782, 1248
AfiI CCNNNNNNNGG 9 cut(s) 14, 284, 285, 500, 569, 700, 838, 1223, 1277
AjiI CACGTC 1 cut(s) 682
AjnI CCWGG 3 cut(s) 478, 674, 1458
AleI CACNNNNGTG 2 cut(s) 260, 389
AluBI AGCT 8 cut(s) 512, 872, 965, 1115, 1290, 1426, 1453, 1489
AluI AGCT 8 cut(s) 512, 872, 965, 1115, 1290, 1426, 1453, 1489
Alw21I GWGCWC 2 cut(s) 257, 984
Alw26I GTCTC 5 cut(s) 185, 239, 268, 1052, 1298
Alw44I GTGCAC 1 cut(s) 253
AlwI GGATC 6 cut(s) 198, 554, 875, 1109, 1424, 1460
AoxI GGCC 5 cut(s) 233, 366, 476, 575, 1152
ApaLI GTGCAC 1 cut(s) 253
ApeKI GCWGC 2 cut(s) 113, 1287
ApoI RAATTY 1 cut(s) 1383
AspLEI GCGC 4 cut(s) 86, 738, 1447, 1483
AspS9I GGNCC 6 cut(s) 17, 145, 234, 476, 491, 828
AsuC2I CCSGG 1 cut(s) 280
AsuHPI GGTGA 5 cut(s) 19, 97, 175, 1448, 1514
AvaII GGWCC 4 cut(s) 17, 145, 491, 828
AxyI CCTNAGG 1 cut(s) 1218
BaeGI GKGCMC 2 cut(s) 257, 644
BanII GRGCYC 1 cut(s) 355
BarI GAAGNNNNNNTAC 2 cut(s) 714, 746
Bbv12I GWGCWC 2 cut(s) 257, 984
BbvI GCAGC 2 cut(s) 125, 1299
BccI CCATC 3 cut(s) 41, 502, 748
BceAI ACGGC 3 cut(s) 62, 83, 273
BciT130I CCWGG 3 cut(s) 480, 676, 1460
BcnI CCSGG 1 cut(s) 280
BcoDI GTCTC 5 cut(s) 185, 239, 268, 1052, 1298
BfaI CTAG 1 cut(s) 873
BfmI CTRYAG 1 cut(s) 498
BfoI RGCGCY 4 cut(s) 87, 739, 1448, 1484
BisI GCNGC 7 cut(s) 57, 60, 87, 114, 172, 175, 1288
BlpI GCTNAGC 1 cut(s) 513
BlsI GCNGC 7 cut(s) 58, 61, 88, 115, 173, 176, 1289
BmcAI AGTACT 1 cut(s) 325
Bme1390I CCNGG 4 cut(s) 280, 480, 676, 1460
Bme18I GGWCC 4 cut(s) 17, 145, 491, 828
BmgBI CACGTC 1 cut(s) 682
BmgT120I GGNCC 6 cut(s) 17, 145, 234, 476, 491, 828
BmiI GGNNCC 6 cut(s) 6, 18, 19, 147, 236, 830
BmrFI CCNGG 4 cut(s) 280, 480, 676, 1460
BmsI GCATC 3 cut(s) 407, 1189, 1522
BplI GAGNNNNNCTC 2 cut(s) 337, 369
BpmI CTGGAG 2 cut(s) 1300, 1355
Bpu10I CCTNAGC 1 cut(s) 564
Bpu1102I GCTNAGC 1 cut(s) 513
BpuEI CTTGAG 2 cut(s) 1101, 1376
BpuMI CCSGG 1 cut(s) 280
BsaBI GATNNNNATC 1 cut(s) 885
BsaI GGTCTC 3 cut(s) 185, 268, 1052
BsaJI CCNNGG 4 cut(s) 186, 278, 675, 858
BsaXI ACNNNNNCTCC 4 cut(s) 236, 266, 779, 809
Bsc4I CCNNNNNNNGG 9 cut(s) 14, 284, 285, 500, 569, 700, 838, 1223, 1277
Bse118I RCCGGY 1 cut(s) 167
Bse1I ACTGG 3 cut(s) 412, 418, 1338
Bse21I CCTNAGG 1 cut(s) 1218
Bse3DI GCAATG 1 cut(s) 870
Bse8I GATNNNNATC 1 cut(s) 885
BseBI CCWGG 3 cut(s) 480, 676, 1460
BseDI CCNNGG 4 cut(s) 186, 278, 675, 858
BseGI GGATG 2 cut(s) 45, 1180
BseJI GATNNNNATC 1 cut(s) 885
BseLI CCNNNNNNNGG 9 cut(s) 14, 284, 285, 500, 569, 700, 838, 1223, 1277
BseMI GCAATG 1 cut(s) 870
BseMII CTCAG 8 cut(s) 320, 341, 377, 504, 555, 709, 930, 1209
BseNI ACTGG 3 cut(s) 412, 418, 1338
BseRI GAGGAG 3 cut(s) 361, 392, 1163
BseSI GKGCMC 2 cut(s) 257, 644
BseXI GCAGC 2 cut(s) 125, 1299
BseYI CCCAGC 1 cut(s) 1485
Bsh1236I CGCG 1 cut(s) 357
BshFI GGCC 5 cut(s) 235, 368, 478, 577, 1154
BsiHKAI GWGCWC 2 cut(s) 257, 984
BsiSI CCGG 2 cut(s) 168, 280
BslFI GGGAC 5 cut(s) 3, 23, 301, 692, 814
BslI CCNNNNNNNGG 9 cut(s) 14, 284, 285, 500, 569, 700, 838, 1223, 1277
BsmAI GTCTC 5 cut(s) 185, 239, 268, 1052, 1298
BsmFI GGGAC 5 cut(s) 3, 23, 301, 692, 814
BsnI GGCC 5 cut(s) 235, 368, 478, 577, 1154
Bso31I GGTCTC 3 cut(s) 185, 268, 1052
Bsp1286I GDGCHC 4 cut(s) 257, 355, 644, 984
Bsp1407I TGTACA 2 cut(s) 730, 780
Bsp143I GATC 8 cut(s) 151, 190, 559, 880, 886, 1101, 1429, 1465
Bsp1720I GCTNAGC 1 cut(s) 513
BspANI GGCC 5 cut(s) 235, 368, 478, 577, 1154
BspCNI CTCAG 8 cut(s) 319, 340, 376, 505, 556, 708, 929, 1210
BspFNI CGCG 1 cut(s) 357
BspLI GGNNCC 6 cut(s) 6, 18, 19, 147, 236, 830
BspPI GGATC 6 cut(s) 198, 554, 875, 1109, 1424, 1460
BspTNI GGTCTC 3 cut(s) 185, 268, 1052
BsrDI GCAATG 1 cut(s) 870
BsrFI RCCGGY 1 cut(s) 167
BsrGI TGTACA 2 cut(s) 730, 780
BsrI ACTGG 3 cut(s) 412, 418, 1338
BssAI RCCGGY 1 cut(s) 167
BssECI CCNNGG 4 cut(s) 186, 278, 675, 858
BssMI GATC 8 cut(s) 151, 190, 559, 880, 886, 1101, 1429, 1465
BssT1I CCWWGG 1 cut(s) 858
Bst2UI CCWGG 3 cut(s) 480, 676, 1460
Bst4CI ACNGT 3 cut(s) 25, 126, 986
Bst6I CTCTTC 4 cut(s) 6, 224, 266, 831
BstAUI TGTACA 2 cut(s) 730, 780
BstC8I GCNNGC 1 cut(s) 355
BstEII GGTNACC 1 cut(s) 163
BstENI CCTNNNNNAGG 2 cut(s) 698, 836
BstF5I GGATG 2 cut(s) 45, 1180
BstFNI CGCG 1 cut(s) 357
BstH2I RGCGCY 4 cut(s) 87, 739, 1448, 1484
BstHHI GCGC 4 cut(s) 86, 738, 1447, 1483
BstKTI GATC 8 cut(s) 154, 193, 562, 883, 889, 1104, 1432, 1468
BstMAI GTCTC 5 cut(s) 185, 239, 268, 1052, 1298
BstMBI GATC 8 cut(s) 151, 190, 559, 880, 886, 1101, 1429, 1465
BstNI CCWGG 3 cut(s) 480, 676, 1460
BstPI GGTNACC 1 cut(s) 163
BstSCI CCNGG 4 cut(s) 278, 478, 674, 1458
BstSFI CTRYAG 1 cut(s) 498
BstSLI GKGCMC 2 cut(s) 257, 644
BstUI CGCG 1 cut(s) 357
BstV1I GCAGC 2 cut(s) 125, 1299
BstX2I RGATCY 1 cut(s) 190
BstXI CCANNNNNNTGG 1 cut(s) 891
BstYI RGATCY 1 cut(s) 190
Bsu36I CCTNAGG 1 cut(s) 1218
BsuRI GGCC 5 cut(s) 235, 368, 478, 577, 1154
BtrI CACGTC 1 cut(s) 682
BtsCI GGATG 2 cut(s) 45, 1180
BtsIMutI CAGTG 2 cut(s) 896, 982
Cac8I GCNNGC 1 cut(s) 355
CfoI GCGC 4 cut(s) 86, 738, 1447, 1483
Cfr10I RCCGGY 1 cut(s) 167
Cfr13I GGNCC 6 cut(s) 17, 145, 234, 476, 491, 828
CsiI ACCWGGT 1 cut(s) 1458
Csp6I GTAC 5 cut(s) 324, 411, 731, 781, 1247
CviAII CATG 4 cut(s) 298, 569, 653, 1004
CviQI GTAC 5 cut(s) 324, 411, 731, 781, 1247
DpnI GATC 8 cut(s) 153, 192, 561, 882, 888, 1103, 1431, 1467
DpnII GATC 8 cut(s) 151, 190, 559, 880, 886, 1101, 1429, 1465
DraI TTTAAA 1 cut(s) 1239
Eam1104I CTCTTC 4 cut(s) 6, 224, 266, 831
EarI CTCTTC 4 cut(s) 6, 224, 266, 831
EciI GGCGGA 2 cut(s) 55, 85
Eco130I CCWWGG 1 cut(s) 858
Eco147I AGGCCT 1 cut(s) 1154
Eco24I GRGCYC 1 cut(s) 355
Eco31I GGTCTC 3 cut(s) 185, 268, 1052
Eco47I GGWCC 4 cut(s) 17, 145, 491, 828
Eco57I CTGAAG 1 cut(s) 1048
Eco81I CCTNAGG 1 cut(s) 1218
Eco91I GGTNACC 1 cut(s) 163
EcoNI CCTNNNNNAGG 2 cut(s) 698, 836
EcoO109I RGGNCCY 3 cut(s) 17, 234, 828
EcoO65I GGTNACC 1 cut(s) 163
EcoRII CCWGG 3 cut(s) 478, 674, 1458
EcoT14I CCWWGG 1 cut(s) 858
EcoT38I GRGCYC 1 cut(s) 355
ErhI CCWWGG 1 cut(s) 858
FaeI CATG 4 cut(s) 301, 572, 656, 1007
FalI AAGNNNNNCTT 2 cut(s) 828, 860
FaqI GGGAC 5 cut(s) 3, 23, 301, 692, 814
FatI CATG 4 cut(s) 297, 568, 652, 1003
FauI CCCGC 2 cut(s) 214, 1057
Fnu4HI GCNGC 7 cut(s) 57, 60, 87, 114, 172, 175, 1288
FokI GGATG 2 cut(s) 32, 1167
FriOI GRGCYC 1 cut(s) 355
Fsp4HI GCNGC 7 cut(s) 57, 60, 87, 114, 172, 175, 1288
FspBI CTAG 1 cut(s) 873
GlaI GCGC 4 cut(s) 85, 737, 1446, 1482
GluI GCNGC 7 cut(s) 57, 60, 87, 114, 172, 175, 1288
GsaI CCCAGC 1 cut(s) 1489
GsuI CTGGAG 2 cut(s) 1300, 1355
HaeII RGCGCY 4 cut(s) 87, 739, 1448, 1484
HaeIII GGCC 5 cut(s) 235, 368, 478, 577, 1154
HapII CCGG 2 cut(s) 168, 280
HhaI GCGC 4 cut(s) 86, 738, 1447, 1483
Hin1II CATG 4 cut(s) 301, 572, 656, 1007
Hin6I GCGC 4 cut(s) 84, 736, 1445, 1481
HinP1I GCGC 4 cut(s) 84, 736, 1445, 1481
HinfI GANTC 4 cut(s) 92, 140, 1072, 1138
HpaII CCGG 2 cut(s) 168, 280
HphI GGTGA 5 cut(s) 19, 97, 175, 1448, 1514
Hpy166II GTNNAC 5 cut(s) 255, 663, 715, 781, 908
Hpy188I TCNGA 9 cut(s) 145, 187, 309, 345, 430, 698, 919, 1067, 1143
Hpy188III TCNNGA 9 cut(s) 557, 563, 884, 1019, 1031, 1057, 1118, 1184, 1225
Hpy8I GTNNAC 5 cut(s) 255, 663, 715, 781, 908
Hpy99I CGWCG 2 cut(s) 104, 140
HpyAV CCTTC 3 cut(s) 52, 567, 1072
HpyCH4III ACNGT 3 cut(s) 25, 126, 986
HpyCH4IV ACGT 2 cut(s) 659, 681
HpyCH4V TGCA 5 cut(s) 255, 398, 652, 805, 953
HpySE526I ACGT 2 cut(s) 659, 681
Hsp92II CATG 4 cut(s) 301, 572, 656, 1007
HspAI GCGC 4 cut(s) 84, 736, 1445, 1481
KflI GGGWCCC 1 cut(s) 17
Kzo9I GATC 8 cut(s) 151, 190, 559, 880, 886, 1101, 1429, 1465
Lsp1109I GCAGC 2 cut(s) 125, 1299
LweI GCATC 3 cut(s) 407, 1189, 1522
MabI ACCWGGT 1 cut(s) 1458
MaeI CTAG 1 cut(s) 873
MaeII ACGT 2 cut(s) 659, 681
MaeIII GTNAC 7 cut(s) 25, 103, 163, 382, 391, 1069, 1106
MalI GATC 8 cut(s) 153, 192, 561, 882, 888, 1103, 1431, 1467
MboI GATC 8 cut(s) 151, 190, 559, 880, 886, 1101, 1429, 1465
MboII GAAGA 7 cut(s) 23, 241, 283, 393, 481, 634, 848
MflI RGATCY 1 cut(s) 190
MhlI GDGCHC 4 cut(s) 257, 355, 644, 984
MluCI AATT 5 cut(s) 519, 744, 1371, 1383, 1435
MlyI GAGTC 2 cut(s) 134, 1066
MmeI TCCRAC 1 cut(s) 155
MseI TTAA 4 cut(s) 419, 792, 930, 1238
MslI CAYNNNNRTG 2 cut(s) 260, 389
MspI CCGG 2 cut(s) 168, 280
MspR9I CCNGG 4 cut(s) 280, 480, 676, 1460
MvaI CCWGG 3 cut(s) 480, 676, 1460
MvnI CGCG 1 cut(s) 357
NciI CCSGG 1 cut(s) 280
NdeII GATC 8 cut(s) 151, 190, 559, 880, 886, 1101, 1429, 1465
NlaIII CATG 4 cut(s) 301, 572, 656, 1007
NlaIV GGNNCC 6 cut(s) 6, 18, 19, 147, 236, 830
NmuCI GTSAC 6 cut(s) 25, 103, 163, 382, 391, 1069
OliI CACNNNNGTG 2 cut(s) 260, 389
PceI AGGCCT 1 cut(s) 1154
PfeI GAWTC 2 cut(s) 92, 1138
PflFI GACNNNGTC 2 cut(s) 292, 1419
PkrI GCNGC 7 cut(s) 58, 61, 88, 115, 173, 176, 1289
PleI GAGTC 2 cut(s) 134, 1066
PpsI GAGTC 2 cut(s) 134, 1066
PpuMI RGGWCCY 2 cut(s) 17, 828
Psp5II RGGWCCY 2 cut(s) 17, 828
Psp6I CCWGG 3 cut(s) 478, 674, 1458
PspEI GGTNACC 1 cut(s) 163
PspFI CCCAGC 1 cut(s) 1485
PspGI CCWGG 3 cut(s) 478, 674, 1458
PspN4I GGNNCC 6 cut(s) 6, 18, 19, 147, 236, 830
PspPI GGNCC 6 cut(s) 17, 145, 234, 476, 491, 828
PspPPI RGGWCCY 2 cut(s) 17, 828
PsuI RGATCY 1 cut(s) 190
PsyI GACNNNGTC 2 cut(s) 292, 1419
RsaI GTAC 5 cut(s) 325, 412, 732, 782, 1248
RsaNI GTAC 5 cut(s) 324, 411, 731, 781, 1247
RseI CAYNNNNRTG 2 cut(s) 260, 389
SaqAI TTAA 4 cut(s) 419, 792, 930, 1238
SatI GCNGC 7 cut(s) 57, 60, 87, 114, 172, 175, 1288
Sau3AI GATC 8 cut(s) 151, 190, 559, 880, 886, 1101, 1429, 1465
Sau96I GGNCC 6 cut(s) 17, 145, 234, 476, 491, 828
ScaI AGTACT 1 cut(s) 325
SchI GAGTC 2 cut(s) 134, 1066
ScrFI CCNGG 4 cut(s) 280, 480, 676, 1460
SduI GDGCHC 4 cut(s) 257, 355, 644, 984
SexAI ACCWGGT 1 cut(s) 1458
SfaNI GCATC 3 cut(s) 407, 1189, 1522
SfcI CTRYAG 1 cut(s) 498
SinI GGWCC 4 cut(s) 17, 145, 491, 828
SmiMI CAYNNNNRTG 2 cut(s) 260, 389
SmlI CTYRAG 2 cut(s) 1116, 1355
SmoI CTYRAG 2 cut(s) 1116, 1355
Sse9I AATT 5 cut(s) 519, 744, 1371, 1383, 1435
SseBI AGGCCT 1 cut(s) 1154
SspI AATATT 1 cut(s) 1474
SspMI CTAG 1 cut(s) 873
StuI AGGCCT 1 cut(s) 1154
StyD4I CCNGG 4 cut(s) 278, 478, 674, 1458
StyI CCWWGG 1 cut(s) 858
TaaI ACNGT 3 cut(s) 25, 126, 986
TaiI ACGT 2 cut(s) 662, 684
TaqI TCGA 2 cut(s) 961, 1056
TasI AATT 5 cut(s) 519, 744, 1371, 1383, 1435
TatI WGTACW 3 cut(s) 323, 730, 780
TauI GCSGC 5 cut(s) 59, 62, 89, 174, 177
TfiI GAWTC 2 cut(s) 92, 1138
Tru1I TTAA 4 cut(s) 419, 792, 930, 1238
Tru9I TTAA 4 cut(s) 419, 792, 930, 1238
TscAI CASTG 2 cut(s) 896, 989
TseFI GTSAC 6 cut(s) 25, 103, 163, 382, 391, 1069
TseI GCWGC 2 cut(s) 113, 1287
Tsp45I GTSAC 6 cut(s) 25, 103, 163, 382, 391, 1069
TspDTI ATGAA 5 cut(s) 34, 329, 669, 1110, 1425
TspRI CASTG 2 cut(s) 896, 989
Tth111I GACNNNGTC 2 cut(s) 292, 1419
VneI GTGCAC 1 cut(s) 253
VpaK11BI GGWCC 4 cut(s) 17, 145, 491, 828
XagI CCTNNNNNAGG 2 cut(s) 698, 836
XapI RAATTY 1 cut(s) 1383
XspI CTAG 1 cut(s) 873
ZrmI AGTACT 1 cut(s) 325
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.