MD11G1169500.v1.1

Plant transposase (Ptta/En/Spm family)

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
malus_domestica
Chr11
OG0000260
Physical Location & Seq
Reverse (-)
18174353 .. 18176094
1742 bp
Loading structure...
UTR
Exon/CDS
Intron
MD11G1169500.v1.1.491

Sequence Viewer

Length: 1203 bp
ATGCCTTTTTGCTTTTCCATTGTAGGTGTTAATGGTTCTGTACCAAACTTACCAGATGAAAGACCAGTGCGCGGGGCATGTCGGTTGGTTAAAACCAATCGTATTGTTCGTATTACACAAGCAAAGATCAAGGTCGTTATAGACCCAGTGCATAGGCGAGCAACTGATAAAGTTGTTCATAGCTTGTTGGCACATGATACCGGGGCTATTGTTCGCCAACACTGCCCAATGAACACAGCATATTGGAAAAGAATGTCTGACGAGTCGAAGTCAGACCTCGTCTCGGAGATCACTGTGAACTTCGACTTGGACACCAATATTCAAGAACATTATGACTATGTTGATAGACTCATGTCTAGACGATACAAGGAGTTCAAGTATGAGTTACATGCATACTTTTTAGAGTGGGCATCGGCTGAGGAGGCATTGGCCAATCCTCCGATAGAGATGGAATCAAGACCTGGGGAACCTGGACAGTGGGAGTTTTTATGCGAACATTTTCAGTCAGAGAAGTTTCTGAAACAATCAGAGGCTAACAAAAAAAATCGAGCCCAAAAGAAGTATGAGCATCATGCTGGTTCACGCCCACTCGCCTACATAGTGGAAGAGTGTACACAGGCGGGTTCCCAATTCCCTGAGATTGATACCTTCGAAATTGCTTATGCCGGGAAGAACAAAAACTGGACCAATGAGACTGCCAAGTCCAAATTTGATGAGATGCTTGCTAGGAAAGAGGATTATCTTAATGAATTAGCAAAGGATTATCCGGAGGATACTCCCTTGAATGAGATAGTAGTACCTGATCAAGATGTTGGTCTTCATATCCTTAATGATGTACTGGGTGTTAAGCCTGGTAAGCAGATACGCGGTTTGGGTGATGGCCGAGTTCGTGAGCTTGGTGGATCAACTTCTCGGACGTCACTGAGAGCACGTCAGTTGGAGGAGGAACTGGTAGAGGAAAGAGCTGCTCGACAGGCAGCTGATGCAGCTCGTGAAGCAGCAGATCAGCGAATAGTTGCATCTGATACGGCTCGTGCAGCAGCCAAACAAACTCTTGCAGTTATGATGCAAACATGGCAGCACTCTATGGTAGACCTGGCAGCGCGGGTTCCTGGATGGGAACCTCCATCATTGATAATACCACCACAAACACAACCTGATCAACATGTAGCTCATGATGAGAACTACAATGAGAATGAATAA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
Transposase_24

Protein Analysis

401

Amino Acids

45.48

Weight (kDa)

5.63

Isoelectric Point (pI)

41.76

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
Transposase_24 PF03004 158 - 292 5.1e-09 Plant transposase (Ptta/En/Spm family)
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes (Group: OG0000260)

Species Orthologous Gene IDs
fragaria_vesca FvH4_1g01701 FvH4_4g03270
malus_domestica MD00G1017800.v1.1 MD00G1142300.v1.1 MD00G1145500.v1.1 MD00G1191000.v1.1 MD01G1112800.v1.1 MD01G1143700.v1.1 MD02G1048600.v1.1 MD02G1196000.v1.1 MD03G1062700.v1.1 MD03G1095500.v1.1 MD03G1095600.v1.1 MD03G1125500.v1.1 MD03G1154200.v1.1 MD03G1154300.v1.1 MD03G1170400.v1.1 MD03G1179800.v1.1 MD03G1196800.v1.1 MD03G1255700.v1.1 MD04G1029900.v1.1 MD04G1054700.v1.1 MD04G1102500.v1.1 MD04G1142700.v1.1 MD05G1052900.v1.1 MD05G1063000.v1.1 MD05G1069200.v1.1 MD05G1160700.v1.1 MD05G1235500.v1.1 MD05G1285100.v1.1 MD05G1321300.v1.1 MD07G1170900.v1.1 MD08G1072400.v1.1 MD08G1151000.v1.1 MD09G1075100.v1.1 MD11G1004200.v1.1 MD11G1134000.v1.1 MD11G1134100.v1.1 MD11G1150600.v1.1 MD11G1167200.v1.1 MD11G1169500.v1.1 MD11G1191200.v1.1 MD11G1215700.v1.1 MD12G1110400.v1.1 MD12G1226000.v1.1 MD14G1070600.v1.1 MD15G1246900.v1.1 MD15G1271300.v1.1 MD15G1304400.v1.1 MD15G1306500.v1.1 MD15G1394800.v1.1 MD16G1222400.v1.1 MD16G1235600.v1.1 MD16G1275200.v1.1 MD17G1164900.v1.1 MD17G1199400.v1.1 MD17G1200600.v1.1 MD17G1255500.v1.1
prunus_persica Prupe.5G199500_v2.0.a1
pyrus_communis pycom01g05550 pycom01g06510 pycom01g10640 pycom02g04780 pycom02g10380 pycom02g16940 pycom02g21170 pycom02g25250 pycom03g11350 pycom03g15980 pycom03g17500 pycom04g07430 pycom04g11390 pycom05g02890 pycom05g12620 pycom05g21240 pycom06g01740 pycom06g06680 pycom06g08420 pycom07g09890 pycom07g10330 pycom07g13390 pycom07g13400 pycom07g14390 pycom08g04050 pycom08g04060 pycom08g09610 pycom08g14690 pycom09g14670 pycom09g14680 pycom09g19450 pycom10g09940 pycom10g14290 pycom11g03600 pycom11g13710 pycom11g14810 pycom11g17720 pycom12g02240 pycom12g06830 pycom12g09950 pycom12g13060 pycom13g02180 pycom13g07740 pycom13g21900 pycom13g23040 pycom14g10400 pycom14g10410 pycom14g10490 pycom14g10680 pycom14g13340 pycom15g15950 pycom15g31530 pycom15g31550 pycom15g38660 pycom16g08600 pycom16g20570 pycom17g09630 pycom17g09650 pycom17g16800 pycom17g16830 pycom17g24070
rosa_chinensis RchiOBHm_Chr2g0086631
rosa_laevigata RLG00000015768
rosa_multiflora Rmu_co8061662.1_g000001 Rmu_co8118782.1_g000001
rosa_roxburghii Rroxscaffold_2G00154370
rosa_rugosa Rorug01G0468000
rosa_samantha Rh2AG019800 Rh2BG019700 Rh2BG019800 Rh2CG019500 Rh2DG020300
rosa_wichuraiana Rw2G001640

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AasI GACNNNNNNGTC 1 cut(s) 700
AatII GACGTC 1 cut(s) 920
AccI GTMKAC 1 cut(s) 1092
AccII CGCG 3 cut(s) 72, 867, 1105
AccIII TCCGGA 1 cut(s) 766
AciI CCGC 4 cut(s) 72, 620, 867, 1105
AclWI GGATC 1 cut(s) 910
AcoI YGGCCR 2 cut(s) 429, 880
AcsI RAATTY 1 cut(s) 707
AcyI GRCGYC 1 cut(s) 917
AfaI GTAC 4 cut(s) 42, 613, 798, 837
AfiI CCNNNNNNNGG 2 cut(s) 71, 283
AflIII ACRYGT 1 cut(s) 1165
AgsI TTSAA 3 cut(s) 323, 376, 784
AjiI CACGTC 1 cut(s) 932
AjnI CCWGG 5 cut(s) 460, 469, 850, 1095, 1111
AjuI GAANNNNNNNTTGG 2 cut(s) 290, 322
AluBI AGCT 6 cut(s) 183, 895, 965, 980, 989, 1172
AluI AGCT 6 cut(s) 183, 895, 965, 980, 989, 1172
Alw21I GWGCWC 1 cut(s) 931
Alw26I GTCTC 2 cut(s) 286, 686
AlwI GGATC 1 cut(s) 910
Aor13HI TCCGGA 1 cut(s) 766
AoxI GGCC 2 cut(s) 429, 880
ApeKI GCWGC 8 cut(s) 965, 977, 986, 998, 1037, 1040, 1078, 1100
ApoI RAATTY 1 cut(s) 707
Asp700I GAANNNNTTC 1 cut(s) 498
AspLEI GCGC 2 cut(s) 72, 1105
AspS9I GGNCC 1 cut(s) 684
AsuC2I CCSGG 2 cut(s) 202, 667
AsuHPI GGTGA 1 cut(s) 887
AsuII TTCGAA 1 cut(s) 651
AvaII GGWCC 1 cut(s) 684
BalI TGGCCA 1 cut(s) 431
BanII GRGCYC 1 cut(s) 553
BauI CACGAG 2 cut(s) 990, 1032
BbsI GAAGAC 1 cut(s) 809
Bbv12I GWGCWC 1 cut(s) 931
BbvCI CCTCAGC 1 cut(s) 417
BbvI GCAGC 8 cut(s) 952, 989, 998, 1010, 1049, 1052, 1090, 1112
BccI CCATC 4 cut(s) 442, 872, 1110, 1135
BceAI ACGGC 1 cut(s) 1044
BciT130I CCWGG 5 cut(s) 462, 471, 852, 1097, 1113
BciVI GTATCC 1 cut(s) 766
BclI TGATCA 2 cut(s) 802, 1159
BcnI CCSGG 2 cut(s) 202, 667
BcoDI GTCTC 2 cut(s) 286, 686
BfaI CTAG 2 cut(s) 357, 726
BfuI GTATCC 1 cut(s) 766
BisI GCNGC 8 cut(s) 966, 978, 987, 999, 1038, 1041, 1079, 1101
BlsI GCNGC 8 cut(s) 967, 979, 988, 1000, 1039, 1042, 1080, 1102
Bme1390I CCNGG 7 cut(s) 202, 462, 471, 667, 852, 1097, 1113
Bme18I GGWCC 1 cut(s) 684
BmgBI CACGTC 1 cut(s) 932
BmgT120I GGNCC 1 cut(s) 684
BmiI GGNNCC 4 cut(s) 468, 625, 1110, 1122
BmrFI CCNGG 7 cut(s) 202, 462, 471, 667, 852, 1097, 1113
BmrI ACTGGG 2 cut(s) 140, 848
BmsI GCATC 6 cut(s) 419, 577, 708, 973, 1028, 1056
BmuI ACTGGG 2 cut(s) 140, 848
BoxI GACNNNNGTC 1 cut(s) 352
BpiI GAAGAC 1 cut(s) 809
Bpu10I CCTNAGC 1 cut(s) 417
Bpu14I TTCGAA 1 cut(s) 651
BpuMI CCSGG 2 cut(s) 202, 667
BsaHI GRCGYC 1 cut(s) 917
BsaJI CCNNGG 2 cut(s) 201, 461
BsaWI WCCGGW 1 cut(s) 766
BsaXI ACNNNNNCTCC 2 cut(s) 362, 392
Bsc4I CCNNNNNNNGG 2 cut(s) 71, 283
Bse1I ACTGG 5 cut(s) 65, 146, 686, 843, 954
BseAI TCCGGA 1 cut(s) 766
BseBI CCWGG 5 cut(s) 462, 471, 852, 1097, 1113
BseDI CCNNGG 2 cut(s) 201, 461
BseGI GGATG 1 cut(s) 1121
BseLI CCNNNNNNNGG 2 cut(s) 71, 283
BseMII CTCAG 3 cut(s) 408, 627, 914
BseNI ACTGG 5 cut(s) 65, 146, 686, 843, 954
BseRI GAGGAG 2 cut(s) 434, 956
BseXI GCAGC 8 cut(s) 952, 989, 998, 1010, 1049, 1052, 1090, 1112
BsgI GTGCAG 1 cut(s) 1056
Bsh1236I CGCG 3 cut(s) 72, 867, 1105
BshFI GGCC 2 cut(s) 431, 882
BsiHKAI GWGCWC 1 cut(s) 931
BsiSI CCGG 3 cut(s) 201, 666, 767
BslI CCNNNNNNNGG 2 cut(s) 71, 283
BsmAI GTCTC 2 cut(s) 286, 686
BsmBI CGTCTC 1 cut(s) 286
BsnI GGCC 2 cut(s) 431, 882
Bsp119I TTCGAA 1 cut(s) 651
Bsp1286I GDGCHC 2 cut(s) 553, 931
Bsp13I TCCGGA 1 cut(s) 766
Bsp1407I TGTACA 1 cut(s) 611
Bsp143I GATC 6 cut(s) 126, 288, 802, 902, 1003, 1159
BspACI CCGC 4 cut(s) 72, 620, 867, 1105
BspANI GGCC 2 cut(s) 431, 882
BspCNI CTCAG 3 cut(s) 409, 628, 915
BspEI TCCGGA 1 cut(s) 766
BspFNI CGCG 3 cut(s) 72, 867, 1105
BspHI TCATGA 1 cut(s) 1174
BspLI GGNNCC 4 cut(s) 468, 625, 1110, 1122
BspPI GGATC 1 cut(s) 910
BspT104I TTCGAA 1 cut(s) 651
BsrGI TGTACA 1 cut(s) 611
BsrI ACTGG 5 cut(s) 65, 146, 686, 843, 954
BssECI CCNNGG 2 cut(s) 201, 461
BssMI GATC 6 cut(s) 126, 288, 802, 902, 1003, 1159
BssNI GRCGYC 1 cut(s) 917
BssSI CACGAG 2 cut(s) 990, 1032
Bst2BI CACGAG 2 cut(s) 990, 1032
Bst2UI CCWGG 5 cut(s) 462, 471, 852, 1097, 1113
Bst4CI ACNGT 2 cut(s) 295, 477
Bst6I CTCTTC 1 cut(s) 600
BstACI GRCGYC 1 cut(s) 917
BstAPI GCANNNNNTGC 1 cut(s) 983
BstAUI TGTACA 1 cut(s) 611
BstBI TTCGAA 1 cut(s) 651
BstC8I GCNNGC 2 cut(s) 159, 723
BstDEI CTNAG 3 cut(s) 417, 636, 923
BstF5I GGATG 1 cut(s) 1121
BstFNI CGCG 3 cut(s) 72, 867, 1105
BstHHI GCGC 2 cut(s) 72, 1105
BstKTI GATC 6 cut(s) 129, 291, 805, 905, 1006, 1162
BstMAI GTCTC 2 cut(s) 286, 686
BstMBI GATC 6 cut(s) 126, 288, 802, 902, 1003, 1159
BstMWI GCNNNNNNNGC 9 cut(s) 222, 422, 856, 974, 983, 986, 995, 1037, 1075
BstNI CCWGG 5 cut(s) 462, 471, 852, 1097, 1113
BstNSI RCATGY 3 cut(s) 81, 392, 1169
BstPAI GACNNNNGTC 1 cut(s) 352
BstSCI CCNGG 7 cut(s) 200, 460, 469, 665, 850, 1095, 1111
BstUI CGCG 3 cut(s) 72, 867, 1105
BstV1I GCAGC 8 cut(s) 952, 989, 998, 1010, 1049, 1052, 1090, 1112
BstV2I GAAGAC 1 cut(s) 809
BsuI GTATCC 1 cut(s) 766
BsuRI GGCC 2 cut(s) 431, 882
BtrI CACGTC 1 cut(s) 932
BtsCI GGATG 1 cut(s) 1121
BtsI GCAGTG 1 cut(s) 220
BtsIMutI CAGTG 6 cut(s) 72, 153, 220, 291, 482, 920
Cac8I GCNNGC 2 cut(s) 159, 723
CciI TCATGA 1 cut(s) 1174
CfoI GCGC 2 cut(s) 72, 1105
Cfr13I GGNCC 1 cut(s) 684
Csp6I GTAC 4 cut(s) 41, 612, 797, 836
CviAII CATG 8 cut(s) 78, 194, 352, 389, 572, 1074, 1166, 1175
CviQI GTAC 4 cut(s) 41, 612, 797, 836
DdeI CTNAG 3 cut(s) 417, 636, 923
DpnI GATC 6 cut(s) 128, 290, 804, 904, 1005, 1161
DpnII GATC 6 cut(s) 126, 288, 802, 902, 1003, 1159
DrdI GACNNNNNNGTC 1 cut(s) 700
DseDI GACNNNNNNGTC 1 cut(s) 700
EaeI YGGCCR 2 cut(s) 429, 880
Eam1104I CTCTTC 1 cut(s) 600
EarI CTCTTC 1 cut(s) 600
Eco24I GRGCYC 1 cut(s) 553
Eco47I GGWCC 1 cut(s) 684
EcoRII CCWGG 5 cut(s) 460, 469, 850, 1095, 1111
EcoT22I ATGCAT 1 cut(s) 394
EcoT38I GRGCYC 1 cut(s) 553
Esp3I CGTCTC 1 cut(s) 286
FaeI CATG 8 cut(s) 81, 197, 355, 392, 575, 1077, 1169, 1178
FatI CATG 8 cut(s) 77, 193, 351, 388, 571, 1073, 1165, 1174
FauI CCCGC 3 cut(s) 65, 613, 1098
FbaI TGATCA 2 cut(s) 802, 1159
FblI GTMKAC 1 cut(s) 1092
Fnu4HI GCNGC 8 cut(s) 966, 978, 987, 999, 1038, 1041, 1079, 1101
FokI GGATG 1 cut(s) 1128
FriOI GRGCYC 1 cut(s) 553
Fsp4HI GCNGC 8 cut(s) 966, 978, 987, 999, 1038, 1041, 1079, 1101
FspBI CTAG 2 cut(s) 357, 726
GlaI GCGC 2 cut(s) 71, 1104
GluI GCNGC 8 cut(s) 966, 978, 987, 999, 1038, 1041, 1079, 1101
HaeIII GGCC 2 cut(s) 431, 882
HapII CCGG 3 cut(s) 201, 666, 767
HhaI GCGC 2 cut(s) 72, 1105
Hin1I GRCGYC 1 cut(s) 917
Hin1II CATG 8 cut(s) 81, 197, 355, 392, 575, 1077, 1169, 1178
Hin6I GCGC 2 cut(s) 70, 1103
HinP1I GCGC 2 cut(s) 70, 1103
HinfI GANTC 3 cut(s) 263, 348, 452
HpaII CCGG 3 cut(s) 201, 666, 767
HphI GGTGA 1 cut(s) 887
Hpy166II GTNNAC 5 cut(s) 298, 581, 612, 614, 1093
Hpy188I TCNGA 9 cut(s) 259, 274, 286, 441, 508, 519, 529, 915, 1024
Hpy188III TCNNGA 8 cut(s) 323, 357, 456, 767, 806, 890, 992, 1175
Hpy8I GTNNAC 5 cut(s) 298, 581, 612, 614, 1093
HpyAV CCTTC 1 cut(s) 658
HpyCH4III ACNGT 2 cut(s) 295, 477
HpyCH4IV ACGT 2 cut(s) 917, 931
HpyCH4V TGCA 7 cut(s) 151, 392, 986, 1019, 1037, 1058, 1069
HpyF10VI GCNNNNNNNGC 9 cut(s) 222, 422, 856, 974, 983, 986, 995, 1037, 1075
HpyF3I CTNAG 3 cut(s) 417, 636, 923
HpySE526I ACGT 2 cut(s) 917, 931
Hsp92I GRCGYC 1 cut(s) 917
Hsp92II CATG 8 cut(s) 81, 197, 355, 392, 575, 1077, 1169, 1178
HspAI GCGC 2 cut(s) 70, 1103
Kpn2I TCCGGA 1 cut(s) 766
Ksp22I TGATCA 2 cut(s) 802, 1159
Kzo9I GATC 6 cut(s) 126, 288, 802, 902, 1003, 1159
Lsp1109I GCAGC 8 cut(s) 952, 989, 998, 1010, 1049, 1052, 1090, 1112
LweI GCATC 6 cut(s) 419, 577, 708, 973, 1028, 1056
MaeI CTAG 2 cut(s) 357, 726
MaeII ACGT 2 cut(s) 917, 931
MaeIII GTNAC 2 cut(s) 384, 918
MalI GATC 6 cut(s) 128, 290, 804, 904, 1005, 1161
MboI GATC 6 cut(s) 126, 288, 802, 902, 1003, 1159
MboII GAAGA 3 cut(s) 617, 682, 809
MhlI GDGCHC 2 cut(s) 553, 931
MlsI TGGCCA 1 cut(s) 431
MluCI AATT 4 cut(s) 629, 654, 707, 749
MluNI TGGCCA 1 cut(s) 431
MlyI GAGTC 2 cut(s) 272, 342
MmeI TCCRAC 1 cut(s) 918
Mox20I TGGCCA 1 cut(s) 431
Mph1103I ATGCAT 1 cut(s) 394
MroI TCCGGA 1 cut(s) 766
MroXI GAANNNNTTC 1 cut(s) 498
MscI TGGCCA 1 cut(s) 431
MseI TTAA 5 cut(s) 30, 90, 744, 828, 846
Msp20I TGGCCA 1 cut(s) 431
MspA1I CMGCKG 1 cut(s) 980
MspI CCGG 3 cut(s) 201, 666, 767
MspR9I CCNGG 7 cut(s) 202, 462, 471, 667, 852, 1097, 1113
MvaI CCWGG 5 cut(s) 462, 471, 852, 1097, 1113
MvnI CGCG 3 cut(s) 72, 867, 1105
MwoI GCNNNNNNNGC 9 cut(s) 222, 422, 856, 974, 983, 986, 995, 1037, 1075
NciI CCSGG 2 cut(s) 202, 667
NdeII GATC 6 cut(s) 126, 288, 802, 902, 1003, 1159
NlaIII CATG 8 cut(s) 81, 197, 355, 392, 575, 1077, 1169, 1178
NlaIV GGNNCC 4 cut(s) 468, 625, 1110, 1122
NmeAIII GCCGAG 1 cut(s) 908
NmuCI GTSAC 1 cut(s) 918
NsiI ATGCAT 1 cut(s) 394
NspI RCATGY 3 cut(s) 81, 392, 1169
NspV TTCGAA 1 cut(s) 651
PagI TCATGA 1 cut(s) 1174
PciI ACATGT 1 cut(s) 1165
PcsI WCGNNNNNNNCGW 1 cut(s) 106
PdmI GAANNNNTTC 1 cut(s) 498
PfeI GAWTC 1 cut(s) 452
PflFI GACNNNGTC 1 cut(s) 278
PfoI TCCNGGA 1 cut(s) 1111
PkrI GCNGC 8 cut(s) 967, 979, 988, 1000, 1039, 1042, 1080, 1102
PleI GAGTC 2 cut(s) 271, 342
PpsI GAGTC 2 cut(s) 271, 342
PscI ACATGT 1 cut(s) 1165
PshAI GACNNNNGTC 1 cut(s) 352
Psp6I CCWGG 5 cut(s) 460, 469, 850, 1095, 1111
PspGI CCWGG 5 cut(s) 460, 469, 850, 1095, 1111
PspN4I GGNNCC 4 cut(s) 468, 625, 1110, 1122
PspPI GGNCC 1 cut(s) 684
PsyI GACNNNGTC 1 cut(s) 278
PvuII CAGCTG 1 cut(s) 980
RsaI GTAC 4 cut(s) 42, 613, 798, 837
RsaNI GTAC 4 cut(s) 41, 612, 797, 836
SaqAI TTAA 5 cut(s) 30, 90, 744, 828, 846
SatI GCNGC 8 cut(s) 966, 978, 987, 999, 1038, 1041, 1079, 1101
Sau3AI GATC 6 cut(s) 126, 288, 802, 902, 1003, 1159
Sau96I GGNCC 1 cut(s) 684
SchI GAGTC 2 cut(s) 272, 342
ScrFI CCNGG 7 cut(s) 202, 462, 471, 667, 852, 1097, 1113
SduI GDGCHC 2 cut(s) 553, 931
SfaNI GCATC 6 cut(s) 419, 577, 708, 973, 1028, 1056
SfuI TTCGAA 1 cut(s) 651
SinI GGWCC 1 cut(s) 684
Sse9I AATT 4 cut(s) 629, 654, 707, 749
SsiI CCGC 4 cut(s) 72, 620, 867, 1105
SspI AATATT 1 cut(s) 319
SspMI CTAG 2 cut(s) 357, 726
StyD4I CCNGG 7 cut(s) 200, 460, 469, 665, 850, 1095, 1111
TaaI ACNGT 2 cut(s) 295, 477
TaiI ACGT 2 cut(s) 920, 934
TaqI TCGA 5 cut(s) 266, 303, 547, 651, 970
TasI AATT 4 cut(s) 629, 654, 707, 749
TatI WGTACW 2 cut(s) 611, 835
TfiI GAWTC 1 cut(s) 452
Tru1I TTAA 5 cut(s) 30, 90, 744, 828, 846
Tru9I TTAA 5 cut(s) 30, 90, 744, 828, 846
TscAI CASTG 6 cut(s) 72, 153, 227, 298, 482, 927
TseFI GTSAC 1 cut(s) 918
TseI GCWGC 8 cut(s) 965, 977, 986, 998, 1037, 1040, 1078, 1100
Tsp45I GTSAC 1 cut(s) 918
TspDTI ATGAA 5 cut(s) 72, 167, 245, 762, 809
TspRI CASTG 6 cut(s) 72, 153, 227, 298, 482, 927
Tth111I GACNNNGTC 1 cut(s) 278
VpaK11BI GGWCC 1 cut(s) 684
XapI RAATTY 1 cut(s) 707
XbaI TCTAGA 1 cut(s) 356
XceI RCATGY 3 cut(s) 81, 392, 1169
XmiI GTMKAC 1 cut(s) 1092
XmnI GAANNNNTTC 1 cut(s) 498
XspI CTAG 2 cut(s) 357, 726
ZraI GACGTC 1 cut(s) 918
Zsp2I ATGCAT 1 cut(s) 394
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.