RH2AG019800

Plant transposase (Ptta/En/Spm family)

Design Primers CRISPR Design

Basic Information

Type: Sequence Only
Biological Identity
rosa_samantha
Unknown
OG0000260
Physical Location & Seq
Reverse (-)
0 .. 0
1 bp
Loading structure...
UTR
Exon/CDS
Intron
Rh2AG019800.1

Sequence Viewer

Length: 1734 bp
ATGGGGATAGACGATTATTACAATGGTAGCCCAAAAAATCCGAGCAGGGAAGCCGACCCCAGTTCCACACGACTCAGATCGTCGTCGTCGTCGTCGTTAAATTTCAGGGCTCAATTCCCGCCCTTAATTTTGTTTCAGGGCTCCAAAGGTTCAATCTTTATTGTAAAATGTGCGTCCAATACGTACTGGGTTAATGGGTTTCAATTAATTTTGGGTTCCCCAGTAAAATTCCGTCCTCGCAAAACCATGGAACCCGAAGAGGGCCCCACCGTCACCGCCATCGTCCCCTTCATCCCCGCCGCCGCCGTCGCCGCCGCCTCCGCCATTGTTGCAGTCAGCGTCGCAGAATCCGCCGTCGTCACCGTCGCAGCCAACCCACCGTGTCCAACCAACGACTCGGACCGCGATCAATCGGCGGTGACCGGCGGCGGCGGTCTCTCCGAGGATCTCAAACAAAAGCAGATAGATGTGGTTGCGGGTAAGAAGAGGCCCCGTAAGGAGACTAAGTGCACGGCGGCGGGTAAGAAGAGACCCCGGAATGGGACAAAGTCCATGACTGCTCAGACTGTTGACATTAGTACTCAGCACATTGTTCATCAGAGGAGGGCTCGCGGAACTCAGGCCGAAAATGAGGAGGTCACAGAAGTGACTGCATCTTCAACTGGTACTGGTTCAACACAATCAGATGATGTAGTGCCAATAACAAAAGAAAGCAAAAAGAGGAAGAATGGACCTGGAAAGCGAGGACCATCCACAGGCTCTAAAGCTGAGCAAATTAGGAGAAGAACAGGGAATAGGATTGCTGTCAATCTTGATCCTGAGCATGGAAGGCCGACTGATAAAGGCGTTTCAAGCCTTTTGTCTAATGAGTGTGGGAAGATTGTCAGGGAGAAGTGCCCAATGGTGCATGAAACGTGGACAAAGATTTCCAGGGACGTGAAACATAACCTCAGAAAGGAGGTTGAAGTGAACTTTGAAGTTGATGTTCAGCGCCCATCAATTATACATTACTTGAATAAGGTTATGGGTAAGGTGTACAGGGAGTTTAAGTGCGAGTTGCACAAGCACTACAAAAAGATGAGGTCCCTTGAAGAGGCACTTGATAAACCCCCCAAGGCAATGATAGCTAGAAACGATCCAGATCAGTGGAAGTGTTTGTGTAAACATTTCTCAGAGGAAAAGTTTAAGAGGAAAAGTGAAACCAATGCAAAAAATCGAGCTGGAAAGGAGTATGAGCACTGTGGAGGTTCTCGTCCTCATGGTTTATATTTTCAAGATAAAGTTCAGGAGGGTTCAAAGTTTCCCGCAATCGAGACCTTCAGAGTGACCCATCTCAAAAAGGGGAGTAATGAATGGATCAGTAACAAAGCTCAAGAACAATATGATAAGATGATTCTGAAAGAGGAGGCCTATCTACAAGGCTTGGCAGAGAAGCATCCAGATATTCCAATCAAAGAGTTGCCAATATCCCCTGAGGTCGGGATTGAGATTTTAAAGGAGGTACTTGGTGTGAAACCCAAACAACCAGTTCGTGGATTGGGCAGCTTTTGGGTAAATGAGACATCAACCTCCAGCATTATAGAGGAACTGGAGGAAGTTTATGCTGAACTTGAGAGGGAGAGGGCAATTCGGGCTAAAATTCAAGGAATGTTGAATAATGCCTATGAACGACTTAGTCAGCTTGATCCTAATTTTGAAGCGCCACAGCTTCACCTGGTTGATCCTAATATTTAA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
Transposase_24

Protein Analysis

577

Amino Acids

64.26

Weight (kDa)

9.3

Isoelectric Point (pI)

44.21

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
Transposase_24 PF03004 379 - 517 4.2e-12 Plant transposase (Ptta/En/Spm family)
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes (Group: OG0000260)

Species Orthologous Gene IDs
fragaria_vesca FvH4_1g01701 FvH4_4g03270
malus_domestica MD00G1017800.v1.1 MD00G1142300.v1.1 MD00G1145500.v1.1 MD00G1191000.v1.1 MD01G1112800.v1.1 MD01G1143700.v1.1 MD02G1048600.v1.1 MD02G1196000.v1.1 MD03G1062700.v1.1 MD03G1095500.v1.1 MD03G1095600.v1.1 MD03G1125500.v1.1 MD03G1154200.v1.1 MD03G1154300.v1.1 MD03G1170400.v1.1 MD03G1179800.v1.1 MD03G1196800.v1.1 MD03G1255700.v1.1 MD04G1029900.v1.1 MD04G1054700.v1.1 MD04G1102500.v1.1 MD04G1142700.v1.1 MD05G1052900.v1.1 MD05G1063000.v1.1 MD05G1069200.v1.1 MD05G1160700.v1.1 MD05G1235500.v1.1 MD05G1285100.v1.1 MD05G1321300.v1.1 MD07G1170900.v1.1 MD08G1072400.v1.1 MD08G1151000.v1.1 MD09G1075100.v1.1 MD11G1004200.v1.1 MD11G1134000.v1.1 MD11G1134100.v1.1 MD11G1150600.v1.1 MD11G1167200.v1.1 MD11G1169500.v1.1 MD11G1191200.v1.1 MD11G1215700.v1.1 MD12G1110400.v1.1 MD12G1226000.v1.1 MD14G1070600.v1.1 MD15G1246900.v1.1 MD15G1271300.v1.1 MD15G1304400.v1.1 MD15G1306500.v1.1 MD15G1394800.v1.1 MD16G1222400.v1.1 MD16G1235600.v1.1 MD16G1275200.v1.1 MD17G1164900.v1.1 MD17G1199400.v1.1 MD17G1200600.v1.1 MD17G1255500.v1.1
prunus_persica Prupe.5G199500_v2.0.a1
pyrus_communis pycom01g05550 pycom01g06510 pycom01g10640 pycom02g04780 pycom02g10380 pycom02g16940 pycom02g21170 pycom02g25250 pycom03g11350 pycom03g15980 pycom03g17500 pycom04g07430 pycom04g11390 pycom05g02890 pycom05g12620 pycom05g21240 pycom06g01740 pycom06g06680 pycom06g08420 pycom07g09890 pycom07g10330 pycom07g13390 pycom07g13400 pycom07g14390 pycom08g04050 pycom08g04060 pycom08g09610 pycom08g14690 pycom09g14670 pycom09g14680 pycom09g19450 pycom10g09940 pycom10g14290 pycom11g03600 pycom11g13710 pycom11g14810 pycom11g17720 pycom12g02240 pycom12g06830 pycom12g09950 pycom12g13060 pycom13g02180 pycom13g07740 pycom13g21900 pycom13g23040 pycom14g10400 pycom14g10410 pycom14g10490 pycom14g10680 pycom14g13340 pycom15g15950 pycom15g31530 pycom15g31550 pycom15g38660 pycom16g08600 pycom16g20570 pycom17g09630 pycom17g09650 pycom17g16800 pycom17g16830 pycom17g24070
rosa_chinensis RchiOBHm_Chr2g0086631
rosa_laevigata RLG00000015768
rosa_multiflora Rmu_co8061662.1_g000001 Rmu_co8118782.1_g000001
rosa_roxburghii Rroxscaffold_2G00154370
rosa_rugosa Rorug01G0468000
rosa_samantha Rh2AG019800 Rh2BG019700 Rh2BG019800 Rh2CG019500 Rh2DG020300
rosa_wichuraiana Rw2G001640

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AccB7I CCANNNNNTGG 1 cut(s) 1532
AccII CGCG 2 cut(s) 405, 612
AclWI GGATC 6 cut(s) 453, 809, 1130, 1364, 1679, 1715
AcsI RAATTY 3 cut(s) 100, 227, 1638
AcuI CTGAAG 1 cut(s) 1303
AfaI GTAC 5 cut(s) 185, 580, 667, 1037, 1503
AfiI CCNNNNNNNGG 9 cut(s) 260, 539, 540, 755, 824, 955, 1093, 1478, 1532
AjiI CACGTC 1 cut(s) 937
AjnI CCWGG 3 cut(s) 733, 929, 1713
AleI CACNNNNGTG 1 cut(s) 644
AluBI AGCT 7 cut(s) 767, 1127, 1220, 1370, 1545, 1681, 1708
AluI AGCT 7 cut(s) 767, 1127, 1220, 1370, 1545, 1681, 1708
Alw21I GWGCWC 2 cut(s) 512, 1239
Alw26I GTCTC 5 cut(s) 440, 494, 523, 1307, 1553
Alw44I GTGCAC 1 cut(s) 508
AlwI GGATC 6 cut(s) 453, 809, 1130, 1364, 1679, 1715
AoxI GGCC 5 cut(s) 262, 488, 621, 830, 1407
ApaI GGGCCC 1 cut(s) 266
ApaLI GTGCAC 1 cut(s) 508
ApeKI GCWGC 2 cut(s) 368, 1542
ApoI RAATTY 3 cut(s) 100, 227, 1638
AseI ATTAAT 1 cut(s) 206
AspLEI GCGC 2 cut(s) 993, 1702
AspS9I GGNCC 7 cut(s) 262, 263, 400, 489, 731, 746, 1083
AsuC2I CCSGG 1 cut(s) 535
AsuHPI GGTGA 4 cut(s) 265, 352, 430, 1703
AvaII GGWCC 4 cut(s) 400, 731, 746, 1083
AxyI CCTNAGG 1 cut(s) 1473
BaeGI GKGCMC 3 cut(s) 266, 512, 899
BanII GRGCYC 4 cut(s) 112, 143, 266, 610
Bbv12I GWGCWC 2 cut(s) 512, 1239
BbvI GCAGC 2 cut(s) 380, 1554
BccI CCATC 4 cut(s) 287, 757, 1003, 1338
BceAI ACGGC 3 cut(s) 290, 338, 528
BciT130I CCWGG 3 cut(s) 735, 931, 1715
BcnI CCSGG 1 cut(s) 535
BcoDI GTCTC 5 cut(s) 440, 494, 523, 1307, 1553
BfaI CTAG 1 cut(s) 1128
BfoI RGCGCY 2 cut(s) 994, 1703
BisI GCNGC 9 cut(s) 300, 303, 312, 315, 369, 427, 430, 516, 1543
BlpI GCTNAGC 1 cut(s) 768
BlsI GCNGC 9 cut(s) 301, 304, 313, 316, 370, 428, 431, 517, 1544
BmcAI AGTACT 1 cut(s) 580
Bme1390I CCNGG 4 cut(s) 535, 735, 931, 1715
Bme18I GGWCC 4 cut(s) 400, 731, 746, 1083
BmgBI CACGTC 1 cut(s) 937
BmgT120I GGNCC 7 cut(s) 262, 263, 400, 489, 731, 746, 1083
BmiI GGNNCC 7 cut(s) 142, 217, 252, 264, 265, 491, 1085
BmrFI CCNGG 4 cut(s) 535, 735, 931, 1715
BmrI ACTGGG 3 cut(s) 54, 196, 215
BmsI GCATC 2 cut(s) 662, 1444
BmuI ACTGGG 3 cut(s) 54, 196, 215
BplI GAGNNNNNCTC 2 cut(s) 592, 624
BpmI CTGGAG 2 cut(s) 1555, 1610
Bpu10I CCTNAGC 1 cut(s) 819
Bpu1102I GCTNAGC 1 cut(s) 768
BpuEI CTTGAG 2 cut(s) 1356, 1631
BpuMI CCSGG 1 cut(s) 535
BsaAI YACGTR 1 cut(s) 183
BsaBI GATNNNNATC 1 cut(s) 1140
BsaI GGTCTC 3 cut(s) 440, 523, 1307
BsaJI CCNNGG 5 cut(s) 246, 441, 533, 930, 1113
BsaXI ACNNNNNCTCC 4 cut(s) 491, 521, 1034, 1064
Bsc4I CCNNNNNNNGG 9 cut(s) 260, 539, 540, 755, 824, 955, 1093, 1478, 1532
Bse118I RCCGGY 1 cut(s) 422
Bse1I ACTGG 7 cut(s) 60, 191, 221, 667, 673, 1526, 1593
Bse21I CCTNAGG 1 cut(s) 1473
Bse3DI GCAATG 1 cut(s) 1125
Bse8I GATNNNNATC 1 cut(s) 1140
BseBI CCWGG 3 cut(s) 735, 931, 1715
BseDI CCNNGG 5 cut(s) 246, 441, 533, 930, 1113
BseGI GGATG 3 cut(s) 291, 749, 1435
BseJI GATNNNNATC 1 cut(s) 1140
BseLI CCNNNNNNNGG 9 cut(s) 260, 539, 540, 755, 824, 955, 1093, 1478, 1532
BseMI GCAATG 1 cut(s) 1125
BseMII CTCAG 9 cut(s) 88, 575, 596, 632, 759, 810, 964, 1185, 1464
BseNI ACTGG 7 cut(s) 60, 191, 221, 667, 673, 1526, 1593
BseRI GAGGAG 3 cut(s) 616, 647, 1418
BseSI GKGCMC 3 cut(s) 266, 512, 899
BseXI GCAGC 2 cut(s) 380, 1554
Bsh1236I CGCG 2 cut(s) 405, 612
BshFI GGCC 5 cut(s) 264, 490, 623, 832, 1409
BsiHKAI GWGCWC 2 cut(s) 512, 1239
BsiSI CCGG 2 cut(s) 423, 535
BslFI GGGAC 4 cut(s) 269, 556, 947, 1069
BslI CCNNNNNNNGG 9 cut(s) 260, 539, 540, 755, 824, 955, 1093, 1478, 1532
BsmAI GTCTC 5 cut(s) 440, 494, 523, 1307, 1553
BsmFI GGGAC 4 cut(s) 269, 556, 947, 1069
BsnI GGCC 5 cut(s) 264, 490, 623, 832, 1409
Bso31I GGTCTC 3 cut(s) 440, 523, 1307
Bsp120I GGGCCC 1 cut(s) 262
Bsp1286I GDGCHC 7 cut(s) 112, 143, 266, 512, 610, 899, 1239
Bsp1407I TGTACA 1 cut(s) 1035
Bsp143I GATC 9 cut(s) 77, 406, 445, 814, 1135, 1141, 1356, 1684, 1720
Bsp1720I GCTNAGC 1 cut(s) 768
Bsp19I CCATGG 1 cut(s) 246
BspANI GGCC 5 cut(s) 264, 490, 623, 832, 1409
BspCNI CTCAG 9 cut(s) 87, 574, 595, 631, 760, 811, 963, 1184, 1465
BspFNI CGCG 2 cut(s) 405, 612
BspLI GGNNCC 7 cut(s) 142, 217, 252, 264, 265, 491, 1085
BspPI GGATC 6 cut(s) 453, 809, 1130, 1364, 1679, 1715
BspTNI GGTCTC 3 cut(s) 440, 523, 1307
BsrDI GCAATG 1 cut(s) 1125
BsrFI RCCGGY 1 cut(s) 422
BsrGI TGTACA 1 cut(s) 1035
BsrI ACTGG 7 cut(s) 60, 191, 221, 667, 673, 1526, 1593
BssAI RCCGGY 1 cut(s) 422
BssECI CCNNGG 5 cut(s) 246, 441, 533, 930, 1113
BssMI GATC 9 cut(s) 77, 406, 445, 814, 1135, 1141, 1356, 1684, 1720
BssT1I CCWWGG 2 cut(s) 246, 1113
Bst2UI CCWGG 3 cut(s) 735, 931, 1715
Bst4CI ACNGT 5 cut(s) 271, 364, 381, 568, 1241
Bst6I CTCTTC 4 cut(s) 252, 479, 521, 1086
BstAUI TGTACA 1 cut(s) 1035
BstBAI YACGTR 1 cut(s) 183
BstC8I GCNNGC 1 cut(s) 610
BstDSI CCRYGG 1 cut(s) 246
BstEII GGTNACC 1 cut(s) 418
BstENI CCTNNNNNAGG 2 cut(s) 953, 1091
BstF5I GGATG 3 cut(s) 291, 749, 1435
BstFNI CGCG 2 cut(s) 405, 612
BstH2I RGCGCY 2 cut(s) 994, 1703
BstHHI GCGC 2 cut(s) 993, 1702
BstKTI GATC 9 cut(s) 80, 409, 448, 817, 1138, 1144, 1359, 1687, 1723
BstMAI GTCTC 5 cut(s) 440, 494, 523, 1307, 1553
BstMBI GATC 9 cut(s) 77, 406, 445, 814, 1135, 1141, 1356, 1684, 1720
BstMWI GCNNNNNNNGC 9 cut(s) 308, 311, 320, 329, 350, 829, 852, 1124, 1631
BstNI CCWGG 3 cut(s) 735, 931, 1715
BstPI GGTNACC 1 cut(s) 418
BstSCI CCNGG 4 cut(s) 533, 733, 929, 1713
BstSLI GKGCMC 3 cut(s) 266, 512, 899
BstSNI TACGTA 1 cut(s) 183
BstUI CGCG 2 cut(s) 405, 612
BstV1I GCAGC 2 cut(s) 380, 1554
BstX2I RGATCY 1 cut(s) 445
BstXI CCANNNNNNTGG 1 cut(s) 1146
BstYI RGATCY 1 cut(s) 445
Bsu36I CCTNAGG 1 cut(s) 1473
BsuRI GGCC 5 cut(s) 264, 490, 623, 832, 1409
BtgI CCRYGG 1 cut(s) 246
BtrI CACGTC 1 cut(s) 937
BtsCI GGATG 3 cut(s) 291, 749, 1435
BtsIMutI CAGTG 2 cut(s) 1151, 1237
Cac8I GCNNGC 1 cut(s) 610
CfoI GCGC 2 cut(s) 993, 1702
Cfr10I RCCGGY 1 cut(s) 422
Cfr13I GGNCC 7 cut(s) 262, 263, 400, 489, 731, 746, 1083
CpoI CGGWCCG 1 cut(s) 400
CseI GACGC 2 cut(s) 162, 328
CsiI ACCWGGT 1 cut(s) 1713
Csp6I GTAC 5 cut(s) 184, 579, 666, 1036, 1502
CspI CGGWCCG 1 cut(s) 400
CviAII CATG 5 cut(s) 247, 553, 824, 908, 1259
CviQI GTAC 5 cut(s) 184, 579, 666, 1036, 1502
DpnI GATC 9 cut(s) 79, 408, 447, 816, 1137, 1143, 1358, 1686, 1722
DpnII GATC 9 cut(s) 77, 406, 445, 814, 1135, 1141, 1356, 1684, 1720
DraI TTTAAA 1 cut(s) 1494
Eam1104I CTCTTC 4 cut(s) 252, 479, 521, 1086
EarI CTCTTC 4 cut(s) 252, 479, 521, 1086
EciI GGCGGA 2 cut(s) 310, 340
Eco105I TACGTA 1 cut(s) 183
Eco130I CCWWGG 2 cut(s) 246, 1113
Eco147I AGGCCT 1 cut(s) 1409
Eco24I GRGCYC 4 cut(s) 112, 143, 266, 610
Eco31I GGTCTC 3 cut(s) 440, 523, 1307
Eco47I GGWCC 4 cut(s) 400, 731, 746, 1083
Eco57I CTGAAG 1 cut(s) 1303
Eco81I CCTNAGG 1 cut(s) 1473
Eco91I GGTNACC 1 cut(s) 418
EcoNI CCTNNNNNAGG 2 cut(s) 953, 1091
EcoO109I RGGNCCY 4 cut(s) 262, 263, 489, 1083
EcoO65I GGTNACC 1 cut(s) 418
EcoRII CCWGG 3 cut(s) 733, 929, 1713
EcoT14I CCWWGG 2 cut(s) 246, 1113
EcoT38I GRGCYC 4 cut(s) 112, 143, 266, 610
ErhI CCWWGG 2 cut(s) 246, 1113
FaeI CATG 5 cut(s) 250, 556, 827, 911, 1262
FalI AAGNNNNNCTT 2 cut(s) 1083, 1115
FaqI GGGAC 4 cut(s) 269, 556, 947, 1069
FatI CATG 5 cut(s) 246, 552, 823, 907, 1258
FauI CCCGC 5 cut(s) 126, 304, 469, 511, 1312
Fnu4HI GCNGC 9 cut(s) 300, 303, 312, 315, 369, 427, 430, 516, 1543
FokI GGATG 3 cut(s) 278, 736, 1422
FriOI GRGCYC 4 cut(s) 112, 143, 266, 610
Fsp4HI GCNGC 9 cut(s) 300, 303, 312, 315, 369, 427, 430, 516, 1543
FspBI CTAG 1 cut(s) 1128
GlaI GCGC 2 cut(s) 992, 1701
GluI GCNGC 9 cut(s) 300, 303, 312, 315, 369, 427, 430, 516, 1543
GsuI CTGGAG 2 cut(s) 1555, 1610
HaeII RGCGCY 2 cut(s) 994, 1703
HaeIII GGCC 5 cut(s) 264, 490, 623, 832, 1409
HapII CCGG 2 cut(s) 423, 535
HgaI GACGC 2 cut(s) 162, 328
HhaI GCGC 2 cut(s) 993, 1702
Hin1II CATG 5 cut(s) 250, 556, 827, 911, 1262
Hin6I GCGC 2 cut(s) 991, 1700
HinP1I GCGC 2 cut(s) 991, 1700
HincII GTYRAC 1 cut(s) 571
HindII GTYRAC 1 cut(s) 571
HinfI GANTC 4 cut(s) 72, 347, 395, 1393
HpaII CCGG 2 cut(s) 423, 535
HphI GGTGA 4 cut(s) 265, 352, 430, 1703
Hpy166II GTNNAC 6 cut(s) 510, 571, 918, 970, 1036, 1163
Hpy188III TCNNGA 9 cut(s) 812, 818, 1139, 1274, 1286, 1312, 1373, 1439, 1480
Hpy8I GTNNAC 6 cut(s) 510, 571, 918, 970, 1036, 1163
Hpy99I CGWCG 9 cut(s) 85, 88, 91, 94, 97, 311, 344, 359, 368
HpyAV CCTTC 3 cut(s) 298, 822, 1327
HpyCH4III ACNGT 5 cut(s) 271, 364, 381, 568, 1241
HpyCH4IV ACGT 3 cut(s) 182, 914, 936
HpyCH4V TGCA 6 cut(s) 332, 510, 653, 907, 1060, 1208
HpyF10VI GCNNNNNNNGC 9 cut(s) 308, 311, 320, 329, 350, 829, 852, 1124, 1631
HpySE526I ACGT 3 cut(s) 182, 914, 936
Hsp92II CATG 5 cut(s) 250, 556, 827, 911, 1262
HspAI GCGC 2 cut(s) 991, 1700
Kzo9I GATC 9 cut(s) 77, 406, 445, 814, 1135, 1141, 1356, 1684, 1720
LmnI GCTCC 1 cut(s) 146
Lsp1109I GCAGC 2 cut(s) 380, 1554
LweI GCATC 2 cut(s) 662, 1444
MabI ACCWGGT 1 cut(s) 1713
MaeI CTAG 1 cut(s) 1128
MaeII ACGT 3 cut(s) 182, 914, 936
MaeIII GTNAC 7 cut(s) 271, 358, 418, 637, 646, 1324, 1361
MalI GATC 9 cut(s) 79, 408, 447, 816, 1137, 1143, 1358, 1686, 1722
MboI GATC 9 cut(s) 77, 406, 445, 814, 1135, 1141, 1356, 1684, 1720
MboII GAAGA 8 cut(s) 269, 496, 538, 648, 736, 795, 889, 1103
MflI RGATCY 1 cut(s) 445
MhlI GDGCHC 7 cut(s) 112, 143, 266, 512, 610, 899, 1239
MlyI GAGTC 2 cut(s) 66, 389
MmeI TCCRAC 1 cut(s) 410
MseI TTAA 8 cut(s) 98, 125, 192, 206, 1047, 1185, 1493, 1732
MslI CAYNNNNRTG 1 cut(s) 644
MspI CCGG 2 cut(s) 423, 535
MspR9I CCNGG 4 cut(s) 535, 735, 931, 1715
MvaI CCWGG 3 cut(s) 735, 931, 1715
MvnI CGCG 2 cut(s) 405, 612
MwoI GCNNNNNNNGC 9 cut(s) 308, 311, 320, 329, 350, 829, 852, 1124, 1631
NciI CCSGG 1 cut(s) 535
NcoI CCATGG 1 cut(s) 246
NdeII GATC 9 cut(s) 77, 406, 445, 814, 1135, 1141, 1356, 1684, 1720
NlaIII CATG 5 cut(s) 250, 556, 827, 911, 1262
NlaIV GGNNCC 7 cut(s) 142, 217, 252, 264, 265, 491, 1085
NmuCI GTSAC 6 cut(s) 271, 358, 418, 637, 646, 1324
OliI CACNNNNGTG 1 cut(s) 644
PceI AGGCCT 1 cut(s) 1409
PcsI WCGNNNNNNNCGW 3 cut(s) 86, 89, 92
PfeI GAWTC 2 cut(s) 347, 1393
PflFI GACNNNGTC 2 cut(s) 547, 1674
PflMI CCANNNNNTGG 1 cut(s) 1532
PkrI GCNGC 9 cut(s) 301, 304, 313, 316, 370, 428, 431, 517, 1544
PleI GAGTC 2 cut(s) 66, 389
PpsI GAGTC 2 cut(s) 66, 389
Ppu21I YACGTR 1 cut(s) 183
PpuMI RGGWCCY 1 cut(s) 1083
PshBI ATTAAT 1 cut(s) 206
Psp5II RGGWCCY 1 cut(s) 1083
Psp6I CCWGG 3 cut(s) 733, 929, 1713
PspEI GGTNACC 1 cut(s) 418
PspGI CCWGG 3 cut(s) 733, 929, 1713
PspN4I GGNNCC 7 cut(s) 142, 217, 252, 264, 265, 491, 1085
PspOMI GGGCCC 1 cut(s) 262
PspPI GGNCC 7 cut(s) 262, 263, 400, 489, 731, 746, 1083
PspPPI RGGWCCY 1 cut(s) 1083
PsuI RGATCY 1 cut(s) 445
PsyI GACNNNGTC 2 cut(s) 547, 1674
RsaI GTAC 5 cut(s) 185, 580, 667, 1037, 1503
RsaNI GTAC 5 cut(s) 184, 579, 666, 1036, 1502
RseI CAYNNNNRTG 1 cut(s) 644
Rsr2I CGGWCCG 1 cut(s) 400
RsrII CGGWCCG 1 cut(s) 400
SaqAI TTAA 8 cut(s) 98, 125, 192, 206, 1047, 1185, 1493, 1732
SatI GCNGC 9 cut(s) 300, 303, 312, 315, 369, 427, 430, 516, 1543
Sau3AI GATC 9 cut(s) 77, 406, 445, 814, 1135, 1141, 1356, 1684, 1720
Sau96I GGNCC 7 cut(s) 262, 263, 400, 489, 731, 746, 1083
ScaI AGTACT 1 cut(s) 580
SchI GAGTC 2 cut(s) 66, 389
ScrFI CCNGG 4 cut(s) 535, 735, 931, 1715
SduI GDGCHC 7 cut(s) 112, 143, 266, 512, 610, 899, 1239
SexAI ACCWGGT 1 cut(s) 1713
SfaNI GCATC 2 cut(s) 662, 1444
SinI GGWCC 4 cut(s) 400, 731, 746, 1083
SmiMI CAYNNNNRTG 1 cut(s) 644
SmlI CTYRAG 2 cut(s) 1371, 1610
SmoI CTYRAG 2 cut(s) 1371, 1610
SnaBI TACGTA 1 cut(s) 183
SseBI AGGCCT 1 cut(s) 1409
SspI AATATT 1 cut(s) 1729
SspMI CTAG 1 cut(s) 1128
StuI AGGCCT 1 cut(s) 1409
StyD4I CCNGG 4 cut(s) 533, 733, 929, 1713
StyI CCWWGG 2 cut(s) 246, 1113
TaaI ACNGT 5 cut(s) 271, 364, 381, 568, 1241
TaiI ACGT 3 cut(s) 185, 917, 939
TaqI TCGA 2 cut(s) 1216, 1311
TatI WGTACW 2 cut(s) 578, 1035
TauI GCSGC 7 cut(s) 302, 305, 314, 317, 429, 432, 518
TfiI GAWTC 2 cut(s) 347, 1393
Tru1I TTAA 8 cut(s) 98, 125, 192, 206, 1047, 1185, 1493, 1732
Tru9I TTAA 8 cut(s) 98, 125, 192, 206, 1047, 1185, 1493, 1732
TscAI CASTG 2 cut(s) 1151, 1244
TseFI GTSAC 6 cut(s) 271, 358, 418, 637, 646, 1324
TseI GCWGC 2 cut(s) 368, 1542
Tsp45I GTSAC 6 cut(s) 271, 358, 418, 637, 646, 1324
TspDTI ATGAA 5 cut(s) 280, 584, 924, 1365, 1680
TspGWI ACGGA 1 cut(s) 221
TspRI CASTG 2 cut(s) 1151, 1244
Tth111I GACNNNGTC 2 cut(s) 547, 1674
Van91I CCANNNNNTGG 1 cut(s) 1532
VneI GTGCAC 1 cut(s) 508
VpaK11BI GGWCC 4 cut(s) 400, 731, 746, 1083
VspI ATTAAT 1 cut(s) 206
XagI CCTNNNNNAGG 2 cut(s) 953, 1091
XapI RAATTY 3 cut(s) 100, 227, 1638
XspI CTAG 1 cut(s) 1128
ZrmI AGTACT 1 cut(s) 580
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.