MD05G1063000.v1.1

beta-glucosidase activity

Basic Information

Type: gene
Biological Identity
malus_domestica
Chr05
Physical Location & Seq
Forward (+)
11087319 .. 11088422
1104 bp
Loading structure...
UTR
Exon/CDS
Intron
MD05G1063000.v1.1.491

Sequence Viewer

Length: 192 bp
ATGTTTACAGAAAAAGGCGAAGGTGAACAAGATCAACCGAGAGAAGAAAACTCTTCTCCGCCATTTTGGTTCGAGACCTTTCTCCTATTAGATGGAGGTGCACCAACAGGGGGTTCTAAATTCCCCGAGATAGACGTCTTTAAGGATGTTTATGTTCTACCAGGGATGAGCTTGCCGAGCAGTTGCACTTGA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
Pfam Domains
Protein Families

Protein Analysis

64

Amino Acids

6.94

Weight (kDa)

4.09

Isoelectric Point (pI)

79.53

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready

Orthologous Genes (Group: OG0000260)

Species Orthologous Gene IDs
fragaria_vesca FvH4_1g01701 FvH4_4g03270
malus_domestica MD00G1017800.v1.1 MD00G1142300.v1.1 MD00G1145500.v1.1 MD00G1191000.v1.1 MD01G1112800.v1.1 MD01G1143700.v1.1 MD02G1048600.v1.1 MD02G1196000.v1.1 MD03G1062700.v1.1 MD03G1095500.v1.1 MD03G1095600.v1.1 MD03G1125500.v1.1 MD03G1154200.v1.1 MD03G1154300.v1.1 MD03G1170400.v1.1 MD03G1179800.v1.1 MD03G1196800.v1.1 MD03G1255700.v1.1 MD04G1029900.v1.1 MD04G1054700.v1.1 MD04G1102500.v1.1 MD04G1142700.v1.1 MD05G1052900.v1.1 MD05G1063000.v1.1 MD05G1069200.v1.1 MD05G1160700.v1.1 MD05G1235500.v1.1 MD05G1285100.v1.1 MD05G1321300.v1.1 MD07G1170900.v1.1 MD08G1072400.v1.1 MD08G1151000.v1.1 MD09G1075100.v1.1 MD11G1004200.v1.1 MD11G1134000.v1.1 MD11G1134100.v1.1 MD11G1150600.v1.1 MD11G1167200.v1.1 MD11G1169500.v1.1 MD11G1191200.v1.1 MD11G1215700.v1.1 MD12G1110400.v1.1 MD12G1226000.v1.1 MD14G1070600.v1.1 MD15G1246900.v1.1 MD15G1271300.v1.1 MD15G1304400.v1.1 MD15G1306500.v1.1 MD15G1394800.v1.1 MD16G1222400.v1.1 MD16G1235600.v1.1 MD16G1275200.v1.1 MD17G1164900.v1.1 MD17G1199400.v1.1 MD17G1200600.v1.1 MD17G1255500.v1.1
prunus_persica Prupe.5G199500_v2.0.a1
pyrus_communis pycom01g05550 pycom01g06510 pycom01g10640 pycom02g04780 pycom02g10380 pycom02g16940 pycom02g21170 pycom02g25250 pycom03g11350 pycom03g15980 pycom03g17500 pycom04g07430 pycom04g11390 pycom05g02890 pycom05g12620 pycom05g21240 pycom06g01740 pycom06g06680 pycom06g08420 pycom07g09890 pycom07g10330 pycom07g13390 pycom07g13400 pycom07g14390 pycom08g04050 pycom08g04060 pycom08g09610 pycom08g14690 pycom09g14670 pycom09g14680 pycom09g19450 pycom10g09940 pycom10g14290 pycom11g03600 pycom11g13710 pycom11g14810 pycom11g17720 pycom12g02240 pycom12g06830 pycom12g09950 pycom12g13060 pycom13g02180 pycom13g07740 pycom13g21900 pycom13g23040 pycom14g10400 pycom14g10410 pycom14g10490 pycom14g10680 pycom14g13340 pycom15g15950 pycom15g31530 pycom15g31550 pycom15g38660 pycom16g08600 pycom16g20570 pycom17g09630 pycom17g09650 pycom17g16800 pycom17g16830 pycom17g24070
rosa_chinensis RchiOBHm_Chr2g0086631
rosa_laevigata RLG00000015768
rosa_multiflora Rmu_co8061662.1_g000001 Rmu_co8118782.1_g000001
rosa_roxburghii Rroxscaffold_2G00154370
rosa_rugosa Rorug01G0468000
rosa_samantha Rh2AG019800 Rh2BG019700 Rh2BG019800 Rh2CG019500 Rh2DG020300
rosa_wichuraiana Rw2G001640

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AatII GACGTC 1 cut(s) 138
AciI CCGC 1 cut(s) 59
AcsI RAATTY 1 cut(s) 119
AcyI GRCGYC 1 cut(s) 135
AfiI CCNNNNNNNGG 1 cut(s) 110
AjnI CCWGG 1 cut(s) 160
AjuI GAANNNNNNNTTGG 2 cut(s) 97, 129
AluBI AGCT 1 cut(s) 171
AluI AGCT 1 cut(s) 171
Alw21I GWGCWC 1 cut(s) 103
Alw26I GTCTC 1 cut(s) 68
Alw44I GTGCAC 1 cut(s) 99
Ama87I CYCGRG 1 cut(s) 125
ApaLI GTGCAC 1 cut(s) 99
ApoI RAATTY 1 cut(s) 119
AsuHPI GGTGA 1 cut(s) 35
AvaI CYCGRG 1 cut(s) 125
BaeGI GKGCMC 1 cut(s) 103
Bbv12I GWGCWC 1 cut(s) 103
BccI CCATC 1 cut(s) 86
BciT130I CCWGG 1 cut(s) 162
BcoDI GTCTC 1 cut(s) 68
Bme1390I CCNGG 1 cut(s) 162
BmeT110I CYCGRG 1 cut(s) 125
BmrFI CCNGG 1 cut(s) 162
BsaHI GRCGYC 1 cut(s) 135
BsaI GGTCTC 1 cut(s) 68
BsaJI CCNNGG 1 cut(s) 161
Bsc4I CCNNNNNNNGG 1 cut(s) 110
BseBI CCWGG 1 cut(s) 162
BseDI CCNNGG 1 cut(s) 161
BseGI GGATG 2 cut(s) 151, 171
BseLI CCNNNNNNNGG 1 cut(s) 110
BseSI GKGCMC 1 cut(s) 103
BsiHKAI GWGCWC 1 cut(s) 103
BsiHKCI CYCGRG 1 cut(s) 125
BslI CCNNNNNNNGG 1 cut(s) 110
BsmAI GTCTC 1 cut(s) 68
Bso31I GGTCTC 1 cut(s) 68
BsoBI CYCGRG 1 cut(s) 125
Bsp1286I GDGCHC 1 cut(s) 103
Bsp143I GATC 1 cut(s) 31
BspACI CCGC 1 cut(s) 59
BspTNI GGTCTC 1 cut(s) 68
BssECI CCNNGG 1 cut(s) 161
BssMI GATC 1 cut(s) 31
BssNI GRCGYC 1 cut(s) 135
Bst2UI CCWGG 1 cut(s) 162
Bst6I CTCTTC 1 cut(s) 58
BstACI GRCGYC 1 cut(s) 135
BstC8I GCNNGC 1 cut(s) 173
BstF5I GGATG 2 cut(s) 151, 171
BstKTI GATC 1 cut(s) 34
BstMAI GTCTC 1 cut(s) 68
BstMBI GATC 1 cut(s) 31
BstMWI GCNNNNNNNGC 1 cut(s) 177
BstNI CCWGG 1 cut(s) 162
BstSCI CCNGG 1 cut(s) 160
BstSLI GKGCMC 1 cut(s) 103
BtsCI GGATG 2 cut(s) 151, 171
Cac8I GCNNGC 1 cut(s) 173
CviJI RGCY 1 cut(s) 171
CviKI_1 RGCY 1 cut(s) 171
DpnI GATC 1 cut(s) 33
DpnII GATC 1 cut(s) 31
Eam1104I CTCTTC 1 cut(s) 58
EarI CTCTTC 1 cut(s) 58
EciI GGCGGA 1 cut(s) 48
Eco31I GGTCTC 1 cut(s) 68
Eco88I CYCGRG 1 cut(s) 125
EcoRII CCWGG 1 cut(s) 160
FaiI YATR 1 cut(s) 153
FokI GGATG 2 cut(s) 158, 178
Hin1I GRCGYC 1 cut(s) 135
HphI GGTGA 1 cut(s) 35
Hpy166II GTNNAC 3 cut(s) 6, 26, 101
Hpy188III TCNNGA 1 cut(s) 73
Hpy8I GTNNAC 3 cut(s) 6, 26, 101
HpyAV CCTTC 1 cut(s) 14
HpyCH4IV ACGT 1 cut(s) 135
HpyCH4V TGCA 2 cut(s) 101, 186
HpyF10VI GCNNNNNNNGC 1 cut(s) 177
HpySE526I ACGT 1 cut(s) 135
Hsp92I GRCGYC 1 cut(s) 135
Kzo9I GATC 1 cut(s) 31
LpnPI CCDG 3 cut(s) 93, 147, 174
MaeII ACGT 1 cut(s) 135
MalI GATC 1 cut(s) 33
MboI GATC 1 cut(s) 31
MboII GAAGA 2 cut(s) 45, 56
MhlI GDGCHC 1 cut(s) 103
MluCI AATT 1 cut(s) 119
MnlI CCTC 1 cut(s) 89
MseI TTAA 1 cut(s) 141
MspR9I CCNGG 1 cut(s) 162
MvaI CCWGG 1 cut(s) 162
MwoI GCNNNNNNNGC 1 cut(s) 177
NdeII GATC 1 cut(s) 31
Psp6I CCWGG 1 cut(s) 160
PspGI CCWGG 1 cut(s) 160
SaqAI TTAA 1 cut(s) 141
Sau3AI GATC 1 cut(s) 31
ScrFI CCNGG 1 cut(s) 162
SduI GDGCHC 1 cut(s) 103
SetI ASST 5 cut(s) 25, 80, 100, 138, 173
SgeI CNNG 9 cut(s) 41, 51, 85, 120, 137, 139, 173, 174, 184
Sse9I AATT 1 cut(s) 119
SsiI CCGC 1 cut(s) 59
StyD4I CCNGG 1 cut(s) 160
TaiI ACGT 1 cut(s) 138
TaqI TCGA 1 cut(s) 72
TasI AATT 1 cut(s) 119
Tru1I TTAA 1 cut(s) 141
Tru9I TTAA 1 cut(s) 141
VneI GTGCAC 1 cut(s) 99
XapI RAATTY 1 cut(s) 119
ZraI GACGTC 1 cut(s) 136
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.