MD16G1222400.v1.1

Plant transposase (Ptta/En/Spm family)

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
malus_domestica
Chr16
OG0000260
Physical Location & Seq
Reverse (-)
22261844 .. 22265867
4024 bp
Loading structure...
UTR
Exon/CDS
Intron
MD16G1222400.v1.1.491

Sequence Viewer

Length: 1365 bp
ATGTCGAAGTTGATTACTCGTCGTCGGAGTGTGATCAATGCGCCTCCCACATTATCAGCATCTACTGCTCCAGCCGTGAGTGCTCCATTAATTGGGGAGCCTACACCCAATGTTGAGGCTACTTCTACGGCGTCCCAAGTGCCCGTCTCATCGACGTCATCAGTGTCCGTTGAGTCGCTCAGTGCACGGCGGCCTCACCGACGCTGCCGTGACCCAGAGCCTTCTGATCAGACTTCCTCGGCATCCAGAGTTGAGGGTGAGGCCTCCCAGCCACCGGCTAAAAAAAACACCAGGGGGCCTAGTCGAATGCTGAAGGAGTTACAGGGCGTACGTCAAAACAACTCCAAGATCAAGATTGTGTATGACCCACAACATTGTGGAGCGGCTACCACCAAACAGCAGCATAGCGGCGTTGCTAGTAGCTGTGGTGTTGTTATTCGAGATAATTGTCCTTTTCAGCGAGAGTCTTGGGCAAAAATTCCTGAGGAGACGAAGATATTGGTGCGACACAAGTTGTCGTGCGTTTATGATCTTGAGGATGTATCCCCTGAGGTCATGGTCTACTTAGAGGAGACCTTAGCAACCCGGTACAAACAATGGAAGAACAATTTTCACAAGCATTTTAAGCGATGGGATGATGATCCGGAGATTGCTCGCCTACATGTTCCAGATGAGTTGAAGGACCGACCAGAGGATTGGGAGTGGCTCTGCAAACATTTTACGGACCCAAAATTTGTGAAGAAATCTATTGCTGGCCAGAAAGCTCGGGAGTCAAAGACACTTCTCCACCATTCTGGTTCGCAGCCCTTTTCGTATAGGCTTGAGGCACGACGTGAGGAGGGTTCTAAGTTCCCAGAGATCGACATGTTCAAGGACGTTTACGTTCGACCTGGTAATGAGACCACTAAGCAGCTTCATGTTACTATGGAGGAAAAGAGCACTGCTGTTCTCCATGAAGCAGCATCGCAGCTTCCCCCGGAGACCCCGATCGAGGACGTCATAGTACCTGAGGATGCAGGTTTTCAGATCATGACTGATGTCCTGAATCAGAACTATGGTCATCGTCGTGGCAAGGTTGTTCGGGGTATGGGGAAAGCGCGGATTTGTGAGACAGGTGCTTCTTCTTCTAGATCGAACACAGCAGAGGTCGATGCATTGAAGGCGGAAGTGATGCAGCTGAGGACTGAGGGCGCGCATATGAAAGTTCAGCTGAGGGCCCAGGCCGAGGAGCTGAATACCTGTGTCGGGAGGGTGCAAGAACTTGTACAAGCCATACAGACGTCCGGCCTCCAAATCTCGCTACCAGTACCTCATCATGCTCCACCTTCGACCTCAGAGCCACCTTGCCTTGCCGATACCGAGTAG
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
Transposase_24

Protein Analysis

455

Amino Acids

50.58

Weight (kDa)

8.02

Isoelectric Point (pI)

54.78

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
Transposase_24 PF03004 230 - 364 9.8e-07 Plant transposase (Ptta/En/Spm family)
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes (Group: OG0000260)

Species Orthologous Gene IDs
fragaria_vesca FvH4_1g01701 FvH4_4g03270
malus_domestica MD00G1017800.v1.1 MD00G1142300.v1.1 MD00G1145500.v1.1 MD00G1191000.v1.1 MD01G1112800.v1.1 MD01G1143700.v1.1 MD02G1048600.v1.1 MD02G1196000.v1.1 MD03G1062700.v1.1 MD03G1095500.v1.1 MD03G1095600.v1.1 MD03G1125500.v1.1 MD03G1154200.v1.1 MD03G1154300.v1.1 MD03G1170400.v1.1 MD03G1179800.v1.1 MD03G1196800.v1.1 MD03G1255700.v1.1 MD04G1029900.v1.1 MD04G1054700.v1.1 MD04G1102500.v1.1 MD04G1142700.v1.1 MD05G1052900.v1.1 MD05G1063000.v1.1 MD05G1069200.v1.1 MD05G1160700.v1.1 MD05G1235500.v1.1 MD05G1285100.v1.1 MD05G1321300.v1.1 MD07G1170900.v1.1 MD08G1072400.v1.1 MD08G1151000.v1.1 MD09G1075100.v1.1 MD11G1004200.v1.1 MD11G1134000.v1.1 MD11G1134100.v1.1 MD11G1150600.v1.1 MD11G1167200.v1.1 MD11G1169500.v1.1 MD11G1191200.v1.1 MD11G1215700.v1.1 MD12G1110400.v1.1 MD12G1226000.v1.1 MD14G1070600.v1.1 MD15G1246900.v1.1 MD15G1271300.v1.1 MD15G1304400.v1.1 MD15G1306500.v1.1 MD15G1394800.v1.1 MD16G1222400.v1.1 MD16G1235600.v1.1 MD16G1275200.v1.1 MD17G1164900.v1.1 MD17G1199400.v1.1 MD17G1200600.v1.1 MD17G1255500.v1.1
prunus_persica Prupe.5G199500_v2.0.a1
pyrus_communis pycom01g05550 pycom01g06510 pycom01g10640 pycom02g04780 pycom02g10380 pycom02g16940 pycom02g21170 pycom02g25250 pycom03g11350 pycom03g15980 pycom03g17500 pycom04g07430 pycom04g11390 pycom05g02890 pycom05g12620 pycom05g21240 pycom06g01740 pycom06g06680 pycom06g08420 pycom07g09890 pycom07g10330 pycom07g13390 pycom07g13400 pycom07g14390 pycom08g04050 pycom08g04060 pycom08g09610 pycom08g14690 pycom09g14670 pycom09g14680 pycom09g19450 pycom10g09940 pycom10g14290 pycom11g03600 pycom11g13710 pycom11g14810 pycom11g17720 pycom12g02240 pycom12g06830 pycom12g09950 pycom12g13060 pycom13g02180 pycom13g07740 pycom13g21900 pycom13g23040 pycom14g10400 pycom14g10410 pycom14g10490 pycom14g10680 pycom14g13340 pycom15g15950 pycom15g31530 pycom15g31550 pycom15g38660 pycom16g08600 pycom16g20570 pycom17g09630 pycom17g09650 pycom17g16800 pycom17g16830 pycom17g24070
rosa_chinensis RchiOBHm_Chr2g0086631
rosa_laevigata RLG00000015768
rosa_multiflora Rmu_co8061662.1_g000001 Rmu_co8118782.1_g000001
rosa_roxburghii Rroxscaffold_2G00154370
rosa_rugosa Rorug01G0468000
rosa_samantha Rh2AG019800 Rh2BG019700 Rh2BG019800 Rh2CG019500 Rh2DG020300
rosa_wichuraiana Rw2G001640

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AatII GACGTC 3 cut(s) 158, 999, 1283
Acc36I ACCTGC 1 cut(s) 1007
AccB7I CCANNNNNTGG 1 cut(s) 92
AccBSI CCGCTC 1 cut(s) 383
AccI GTMKAC 1 cut(s) 561
AccII CGCG 2 cut(s) 1099, 1193
AccIII TCCGGA 1 cut(s) 643
AciI CCGC 5 cut(s) 190, 383, 408, 1099, 1163
AclWI GGATC 1 cut(s) 635
AcoI YGGCCR 1 cut(s) 754
AcsI RAATTY 2 cut(s) 477, 731
AcuI CTGAAG 1 cut(s) 332
AcyI GRCGYC 4 cut(s) 131, 155, 996, 1280
AdeI CACNNNGTG 1 cut(s) 833
AfaI GTAC 5 cut(s) 330, 590, 1005, 1266, 1308
AfiI CCNNNNNNNGG 6 cut(s) 92, 274, 691, 991, 1225, 1245
AflIII ACRYGT 2 cut(s) 661, 864
AgsI TTSAA 3 cut(s) 679, 871, 1159
AjiI CACGTC 1 cut(s) 833
AjnI CCWGG 3 cut(s) 290, 889, 1218
AluBI AGCT 7 cut(s) 423, 764, 913, 970, 1177, 1210, 1231
AluI AGCT 7 cut(s) 423, 764, 913, 970, 1177, 1210, 1231
Alw21I GWGCWC 3 cut(s) 85, 187, 941
Alw26I GTCTC 6 cut(s) 151, 482, 566, 893, 974, 1103
Alw44I GTGCAC 1 cut(s) 183
AlwI GGATC 1 cut(s) 635
Ama87I CYCGRG 1 cut(s) 765
Aor13HI TCCGGA 1 cut(s) 643
AoxI GGCC 7 cut(s) 191, 261, 296, 754, 1215, 1221, 1285
ApaI GGGCCC 1 cut(s) 1219
ApaLI GTGCAC 1 cut(s) 183
ApeKI GCWGC 7 cut(s) 204, 400, 802, 910, 959, 967, 1174
ApoI RAATTY 2 cut(s) 477, 731
ArsI GACNNNNNNTTYG 2 cut(s) 716, 748
AseI ATTAAT 1 cut(s) 89
AspLEI GCGC 4 cut(s) 43, 1099, 1193, 1195
AspS9I GGNCC 5 cut(s) 296, 682, 724, 1215, 1216
AsuC2I CCSGG 2 cut(s) 586, 977
AsuHPI GGTGA 2 cut(s) 188, 269
AvaI CYCGRG 1 cut(s) 765
AvaII GGWCC 2 cut(s) 682, 724
AxyI CCTNAGG 3 cut(s) 483, 549, 1008
BaeGI GKGCMC 3 cut(s) 144, 187, 1219
BalI TGGCCA 1 cut(s) 756
BanII GRGCYC 1 cut(s) 1219
Bbv12I GWGCWC 3 cut(s) 85, 187, 941
BbvCI CCTCAGC 2 cut(s) 1178, 1211
BbvI GCAGC 7 cut(s) 191, 412, 814, 922, 971, 979, 1186
BccI CCATC 1 cut(s) 624
BceAI ACGGC 4 cut(s) 59, 144, 192, 203
BciT130I CCWGG 3 cut(s) 292, 891, 1220
BciVI GTATCC 1 cut(s) 553
BclI TGATCA 2 cut(s) 33, 226
BcnI CCSGG 2 cut(s) 586, 977
BcoDI GTCTC 6 cut(s) 151, 482, 566, 893, 974, 1103
BfaI CTAG 3 cut(s) 300, 417, 1128
BfuAI ACCTGC 1 cut(s) 1007
BfuI GTATCC 1 cut(s) 553
Bme1390I CCNGG 5 cut(s) 292, 586, 891, 977, 1220
Bme18I GGWCC 2 cut(s) 682, 724
BmeT110I CYCGRG 1 cut(s) 765
BmgBI CACGTC 1 cut(s) 833
BmgT120I GGNCC 5 cut(s) 296, 682, 724, 1215, 1216
BmiI GGNNCC 4 cut(s) 99, 297, 726, 1217
BmrFI CCNGG 5 cut(s) 292, 586, 891, 977, 1220
BmsI GCATC 6 cut(s) 68, 251, 971, 1003, 1141, 1161
BoxI GACNNNNGTC 1 cut(s) 1037
BpmI CTGGAG 1 cut(s) 54
Bpu10I CCTNAGC 3 cut(s) 577, 1178, 1211
BpuEI CTTGAG 2 cut(s) 554, 842
BpuMI CCSGG 2 cut(s) 586, 977
BsaBI GATNNNNATC 1 cut(s) 639
BsaHI GRCGYC 4 cut(s) 131, 155, 996, 1280
BsaI GGTCTC 3 cut(s) 566, 893, 974
BsaJI CCNNGG 5 cut(s) 237, 291, 975, 1218, 1224
BsaWI WCCGGW 1 cut(s) 643
Bsc4I CCNNNNNNNGG 6 cut(s) 92, 274, 691, 991, 1225, 1245
Bse118I RCCGGY 1 cut(s) 274
Bse1I ACTGG 1 cut(s) 1304
Bse21I CCTNAGG 3 cut(s) 483, 549, 1008
Bse8I GATNNNNATC 1 cut(s) 639
BseAI TCCGGA 1 cut(s) 643
BseBI CCWGG 3 cut(s) 292, 891, 1220
BseDI CCNNGG 5 cut(s) 237, 291, 975, 1218, 1224
BseGI GGATG 4 cut(s) 242, 544, 640, 1018
BseJI GATNNNNATC 1 cut(s) 639
BseLI CCNNNNNNNGG 6 cut(s) 92, 274, 691, 991, 1225, 1245
BseMII CTCAG 8 cut(s) 193, 474, 540, 999, 1169, 1176, 1202, 1347
BseNI ACTGG 1 cut(s) 1304
BsePI GCGCGC 1 cut(s) 1191
BseRI GAGGAG 4 cut(s) 500, 584, 851, 1241
BseSI GKGCMC 3 cut(s) 144, 187, 1219
BseXI GCAGC 7 cut(s) 191, 412, 814, 922, 971, 979, 1186
BseYI CCCAGC 1 cut(s) 267
Bsh1236I CGCG 2 cut(s) 1099, 1193
Bsh1285I CGRYCG 1 cut(s) 990
BshFI GGCC 7 cut(s) 193, 263, 298, 756, 1217, 1223, 1287
BsiEI CGRYCG 1 cut(s) 990
BsiHKAI GWGCWC 3 cut(s) 85, 187, 941
BsiHKCI CYCGRG 1 cut(s) 765
BsiSI CCGG 5 cut(s) 275, 586, 644, 977, 1284
BsiWI CGTACG 1 cut(s) 328
BslFI GGGAC 1 cut(s) 118
BslI CCNNNNNNNGG 6 cut(s) 92, 274, 691, 991, 1225, 1245
BsmAI GTCTC 6 cut(s) 151, 482, 566, 893, 974, 1103
BsmBI CGTCTC 2 cut(s) 151, 482
BsmFI GGGAC 1 cut(s) 118
BsmI GAATGC 1 cut(s) 312
BsnI GGCC 7 cut(s) 193, 263, 298, 756, 1217, 1223, 1287
Bso31I GGTCTC 3 cut(s) 566, 893, 974
BsoBI CYCGRG 1 cut(s) 765
Bsp120I GGGCCC 1 cut(s) 1215
Bsp1286I GDGCHC 5 cut(s) 85, 144, 187, 941, 1219
Bsp13I TCCGGA 1 cut(s) 643
Bsp1407I TGTACA 1 cut(s) 1264
Bsp143I GATC 9 cut(s) 33, 226, 348, 529, 640, 858, 987, 1026, 1130
BspACI CCGC 5 cut(s) 190, 383, 408, 1099, 1163
BspANI GGCC 7 cut(s) 193, 263, 298, 756, 1217, 1223, 1287
BspCNI CTCAG 8 cut(s) 192, 475, 541, 1000, 1170, 1177, 1203, 1346
BspEI TCCGGA 1 cut(s) 643
BspFNI CGCG 2 cut(s) 1099, 1193
BspHI TCATGA 1 cut(s) 1029
BspLI GGNNCC 4 cut(s) 99, 297, 726, 1217
BspMI ACCTGC 1 cut(s) 1007
BspPI GGATC 1 cut(s) 635
BspTNI GGTCTC 3 cut(s) 566, 893, 974
BsrBI CCGCTC 1 cut(s) 383
BsrFI RCCGGY 1 cut(s) 274
BsrGI TGTACA 1 cut(s) 1264
BsrI ACTGG 1 cut(s) 1304
BssAI RCCGGY 1 cut(s) 274
BssECI CCNNGG 5 cut(s) 237, 291, 975, 1218, 1224
BssHII GCGCGC 1 cut(s) 1191
BssMI GATC 9 cut(s) 33, 226, 348, 529, 640, 858, 987, 1026, 1130
BssNI GRCGYC 4 cut(s) 131, 155, 996, 1280
Bst2UI CCWGG 3 cut(s) 292, 891, 1220
BstACI GRCGYC 4 cut(s) 131, 155, 996, 1280
BstAPI GCANNNNNTGC 1 cut(s) 65
BstAUI TGTACA 1 cut(s) 1264
BstC8I GCNNGC 3 cut(s) 655, 754, 1193
BstF5I GGATG 4 cut(s) 242, 544, 640, 1018
BstFNI CGCG 2 cut(s) 1099, 1193
BstHHI GCGC 4 cut(s) 43, 1099, 1193, 1195
BstKTI GATC 9 cut(s) 36, 229, 351, 532, 643, 861, 990, 1029, 1133
BstMAI GTCTC 6 cut(s) 151, 482, 566, 893, 974, 1103
BstMBI GATC 9 cut(s) 33, 226, 348, 529, 640, 858, 987, 1026, 1130
BstMCI CGRYCG 1 cut(s) 990
BstMWI GCNNNNNNNGC 4 cut(s) 65, 80, 625, 1160
BstNI CCWGG 3 cut(s) 292, 891, 1220
BstNSI RCATGY 2 cut(s) 665, 868
BstPAI GACNNNNGTC 1 cut(s) 1037
BstSCI CCNGG 5 cut(s) 290, 584, 889, 975, 1218
BstSLI GKGCMC 3 cut(s) 144, 187, 1219
BstUI CGCG 2 cut(s) 1099, 1193
BstV1I GCAGC 7 cut(s) 191, 412, 814, 922, 971, 979, 1186
BstXI CCANNNNNNTGG 2 cut(s) 696, 794
Bsu36I CCTNAGG 3 cut(s) 483, 549, 1008
BsuI GTATCC 1 cut(s) 553
BsuRI GGCC 7 cut(s) 193, 263, 298, 756, 1217, 1223, 1287
BtgZI GCGATG 2 cut(s) 643, 948
BtrI CACGTC 1 cut(s) 833
BtsCI GGATG 4 cut(s) 242, 544, 640, 1018
BtsI GCAGTG 1 cut(s) 939
BtsIMutI CAGTG 3 cut(s) 168, 187, 939
BveI ACCTGC 1 cut(s) 1007
Cac8I GCNNGC 3 cut(s) 655, 754, 1193
CciI TCATGA 1 cut(s) 1029
CfoI GCGC 4 cut(s) 43, 1099, 1193, 1195
Cfr10I RCCGGY 1 cut(s) 274
Cfr13I GGNCC 5 cut(s) 296, 682, 724, 1215, 1216
CseI GACGC 2 cut(s) 120, 210
CsiI ACCWGGT 1 cut(s) 889
Csp6I GTAC 5 cut(s) 329, 589, 1004, 1265, 1307
CviAII CATG 7 cut(s) 556, 662, 865, 917, 953, 1030, 1316
CviQI GTAC 5 cut(s) 329, 589, 1004, 1265, 1307
DpnI GATC 9 cut(s) 35, 228, 350, 531, 642, 860, 989, 1028, 1132
DpnII GATC 9 cut(s) 33, 226, 348, 529, 640, 858, 987, 1026, 1130
DraIII CACNNNGTG 1 cut(s) 833
EaeI YGGCCR 1 cut(s) 754
EciI GGCGGA 1 cut(s) 1178
Eco147I AGGCCT 1 cut(s) 263
Eco24I GRGCYC 1 cut(s) 1219
Eco31I GGTCTC 3 cut(s) 566, 893, 974
Eco47I GGWCC 2 cut(s) 682, 724
Eco57I CTGAAG 1 cut(s) 332
Eco81I CCTNAGG 3 cut(s) 483, 549, 1008
Eco88I CYCGRG 1 cut(s) 765
EcoO109I RGGNCCY 2 cut(s) 296, 1215
EcoRII CCWGG 3 cut(s) 290, 889, 1218
EcoT22I ATGCAT 1 cut(s) 1156
EcoT38I GRGCYC 1 cut(s) 1219
Esp3I CGTCTC 2 cut(s) 151, 482
FaeI CATG 7 cut(s) 559, 665, 868, 920, 956, 1033, 1319
FaqI GGGAC 1 cut(s) 118
FatI CATG 7 cut(s) 555, 661, 864, 916, 952, 1029, 1315
FauNDI CATATG 1 cut(s) 1197
FbaI TGATCA 2 cut(s) 33, 226
FblI GTMKAC 1 cut(s) 561
FokI GGATG 4 cut(s) 229, 551, 647, 1025
FriOI GRGCYC 1 cut(s) 1219
FspBI CTAG 3 cut(s) 300, 417, 1128
GlaI GCGC 4 cut(s) 42, 1098, 1192, 1194
GsaI CCCAGC 1 cut(s) 271
GsuI CTGGAG 1 cut(s) 54
HaeIII GGCC 7 cut(s) 193, 263, 298, 756, 1217, 1223, 1287
HapII CCGG 5 cut(s) 275, 586, 644, 977, 1284
HgaI GACGC 2 cut(s) 120, 210
HhaI GCGC 4 cut(s) 43, 1099, 1193, 1195
Hin1I GRCGYC 4 cut(s) 131, 155, 996, 1280
Hin1II CATG 7 cut(s) 559, 665, 868, 920, 956, 1033, 1319
Hin6I GCGC 4 cut(s) 41, 1097, 1191, 1193
HinP1I GCGC 4 cut(s) 41, 1097, 1191, 1193
HinfI GANTC 4 cut(s) 173, 464, 770, 1045
HpaII CCGG 5 cut(s) 275, 586, 644, 977, 1284
HphI GGTGA 2 cut(s) 188, 269
Hpy166II GTNNAC 3 cut(s) 185, 562, 880
Hpy188I TCNGA 6 cut(s) 27, 226, 231, 1026, 1050, 1336
Hpy8I GTNNAC 3 cut(s) 185, 562, 880
Hpy99I CGWCG 6 cut(s) 24, 27, 157, 204, 834, 1068
HpyAV CCTTC 5 cut(s) 231, 307, 673, 1153, 1335
HpyCH4IV ACGT 7 cut(s) 155, 331, 832, 876, 882, 996, 1280
HpyCH4V TGCA 6 cut(s) 185, 711, 1016, 1154, 1174, 1255
HpyF10VI GCNNNNNNNGC 4 cut(s) 65, 80, 625, 1160
HpySE526I ACGT 7 cut(s) 155, 331, 832, 876, 882, 996, 1280
Hsp92I GRCGYC 4 cut(s) 131, 155, 996, 1280
Hsp92II CATG 7 cut(s) 559, 665, 868, 920, 956, 1033, 1319
HspAI GCGC 4 cut(s) 41, 1097, 1191, 1193
Kpn2I TCCGGA 1 cut(s) 643
Ksp22I TGATCA 2 cut(s) 33, 226
Kzo9I GATC 9 cut(s) 33, 226, 348, 529, 640, 858, 987, 1026, 1130
LmnI GCTCC 6 cut(s) 73, 88, 97, 380, 1228, 1324
Lsp1109I GCAGC 7 cut(s) 191, 412, 814, 922, 971, 979, 1186
LweI GCATC 6 cut(s) 68, 251, 971, 1003, 1141, 1161
MabI ACCWGGT 1 cut(s) 889
MaeI CTAG 3 cut(s) 300, 417, 1128
MaeII ACGT 7 cut(s) 155, 331, 832, 876, 882, 996, 1280
MaeIII GTNAC 3 cut(s) 209, 318, 919
MalI GATC 9 cut(s) 35, 228, 350, 531, 642, 860, 989, 1028, 1132
MbiI CCGCTC 1 cut(s) 383
MboI GATC 9 cut(s) 33, 226, 348, 529, 640, 858, 987, 1026, 1130
MboII GAAGA 5 cut(s) 505, 613, 751, 1113, 1116
MhlI GDGCHC 5 cut(s) 85, 144, 187, 941, 1219
MlsI TGGCCA 1 cut(s) 756
MluCI AATT 5 cut(s) 90, 445, 477, 607, 731
MluNI TGGCCA 1 cut(s) 756
MlyI GAGTC 3 cut(s) 182, 473, 779
MmeI TCCRAC 1 cut(s) 5
Mox20I TGGCCA 1 cut(s) 756
Mph1103I ATGCAT 1 cut(s) 1156
MroI TCCGGA 1 cut(s) 643
MscI TGGCCA 1 cut(s) 756
MseI TTAA 2 cut(s) 89, 624
MslI CAYNNNNRTG 1 cut(s) 1065
Msp20I TGGCCA 1 cut(s) 756
MspA1I CMGCKG 2 cut(s) 1177, 1210
MspI CCGG 5 cut(s) 275, 586, 644, 977, 1284
MspR9I CCNGG 5 cut(s) 292, 586, 891, 977, 1220
Mva1269I GAATGC 1 cut(s) 312
MvaI CCWGG 3 cut(s) 292, 891, 1220
MvnI CGCG 2 cut(s) 1099, 1193
MwoI GCNNNNNNNGC 4 cut(s) 65, 80, 625, 1160
NciI CCSGG 2 cut(s) 586, 977
NdeI CATATG 1 cut(s) 1197
NdeII GATC 9 cut(s) 33, 226, 348, 529, 640, 858, 987, 1026, 1130
NlaIII CATG 7 cut(s) 559, 665, 868, 920, 956, 1033, 1319
NlaIV GGNNCC 4 cut(s) 99, 297, 726, 1217
NmeAIII GCCGAG 2 cut(s) 218, 1249
NmuCI GTSAC 1 cut(s) 209
NsiI ATGCAT 1 cut(s) 1156
NspI RCATGY 2 cut(s) 665, 868
PagI TCATGA 1 cut(s) 1029
PauI GCGCGC 1 cut(s) 1191
PceI AGGCCT 1 cut(s) 263
PciI ACATGT 2 cut(s) 661, 864
PctI GAATGC 1 cut(s) 312
PfeI GAWTC 1 cut(s) 1045
Pfl23II CGTACG 1 cut(s) 328
PflMI CCANNNNNTGG 1 cut(s) 92
Ple19I CGATCG 1 cut(s) 990
PleI GAGTC 3 cut(s) 181, 472, 778
PpsI GAGTC 3 cut(s) 181, 472, 778
PscI ACATGT 2 cut(s) 661, 864
PshAI GACNNNNGTC 1 cut(s) 1037
PshBI ATTAAT 1 cut(s) 89
Psp6I CCWGG 3 cut(s) 290, 889, 1218
PspFI CCCAGC 1 cut(s) 267
PspGI CCWGG 3 cut(s) 290, 889, 1218
PspLI CGTACG 1 cut(s) 328
PspN4I GGNNCC 4 cut(s) 99, 297, 726, 1217
PspOMI GGGCCC 1 cut(s) 1215
PspPI GGNCC 5 cut(s) 296, 682, 724, 1215, 1216
PteI GCGCGC 1 cut(s) 1191
PvuI CGATCG 1 cut(s) 990
PvuII CAGCTG 2 cut(s) 1177, 1210
RsaI GTAC 5 cut(s) 330, 590, 1005, 1266, 1308
RsaNI GTAC 5 cut(s) 329, 589, 1004, 1265, 1307
RseI CAYNNNNRTG 1 cut(s) 1065
SaqAI TTAA 2 cut(s) 89, 624
Sau3AI GATC 9 cut(s) 33, 226, 348, 529, 640, 858, 987, 1026, 1130
Sau96I GGNCC 5 cut(s) 296, 682, 724, 1215, 1216
SchI GAGTC 3 cut(s) 182, 473, 779
ScrFI CCNGG 5 cut(s) 292, 586, 891, 977, 1220
SduI GDGCHC 5 cut(s) 85, 144, 187, 941, 1219
SexAI ACCWGGT 1 cut(s) 889
SfaNI GCATC 6 cut(s) 68, 251, 971, 1003, 1141, 1161
SinI GGWCC 2 cut(s) 682, 724
SmiMI CAYNNNNRTG 1 cut(s) 1065
SmlI CTYRAG 2 cut(s) 533, 821
SmoI CTYRAG 2 cut(s) 533, 821
Sse9I AATT 5 cut(s) 90, 445, 477, 607, 731
SseBI AGGCCT 1 cut(s) 263
SsiI CCGC 5 cut(s) 190, 383, 408, 1099, 1163
SspMI CTAG 3 cut(s) 300, 417, 1128
StuI AGGCCT 1 cut(s) 263
StyD4I CCNGG 5 cut(s) 290, 584, 889, 975, 1218
TaiI ACGT 7 cut(s) 158, 334, 835, 879, 885, 999, 1283
TaqII GACCGA 1 cut(s) 699
TasI AATT 5 cut(s) 90, 445, 477, 607, 731
TatI WGTACW 1 cut(s) 1264
TauI GCSGC 3 cut(s) 193, 386, 411
TfiI GAWTC 1 cut(s) 1045
Tru1I TTAA 2 cut(s) 89, 624
Tru9I TTAA 2 cut(s) 89, 624
TscAI CASTG 3 cut(s) 168, 187, 946
TseFI GTSAC 1 cut(s) 209
TseI GCWGC 7 cut(s) 204, 400, 802, 910, 959, 967, 1174
Tsp45I GTSAC 1 cut(s) 209
TspDTI ATGAA 3 cut(s) 905, 969, 1214
TspGWI ACGGA 2 cut(s) 157, 737
TspRI CASTG 3 cut(s) 168, 187, 946
Van91I CCANNNNNTGG 1 cut(s) 92
VneI GTGCAC 1 cut(s) 183
VpaK11BI GGWCC 2 cut(s) 682, 724
VspI ATTAAT 1 cut(s) 89
XapI RAATTY 2 cut(s) 477, 731
XbaI TCTAGA 1 cut(s) 1127
XceI RCATGY 2 cut(s) 665, 868
XmiI GTMKAC 1 cut(s) 561
XspI CTAG 3 cut(s) 300, 417, 1128
ZraI GACGTC 3 cut(s) 156, 997, 1281
Zsp2I ATGCAT 1 cut(s) 1156
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.