RLG00000015768

Plant transposase (Ptta/En/Spm family)

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_laevigata
Chr4
OG0000260
Physical Location & Seq
Forward (+)
1313842 .. 1316433
2592 bp
Loading structure...
UTR
Exon/CDS
Intron
RLM00000015768

Sequence Viewer

Length: 1533 bp
ATGGAACCCGAAGAGGGCCCCACCGTCACCGCCATCGCCATCGTCCCCTTCATCCCCACCGCCGCCGCCTCCGCCATTGTCGCCGTCACCGCCTCAGAATCTGCCGTCGTCACCGTCGCAGCCAACCCACCGTGTCCAACCAACGACTCGGACCCCGATCAATCGGCGATGACCGGCGGCGGTGGTCTCTCCGAGGATCTCGAACAAAAGCAGATAGATGTGGTTGCGGGTAAGAAGAGACCCCGTAAGGAGACTAAGTGCACGTCAGTGGGTAAGAAGAGACCCCGGAAGGGGACAAAGTCCATGGCTGCTCAGACTGCTGACATTAGTACTCAGCACATTGTTCATCAGAGGAGGGCTCGCGGAACTCAGGCCGAAAATGAGGAGGTAACAGAAGTGACCGCATCTTCAACTGGTACTGGTTCAACACAATCAGATGATGTAGTGCCAATAACAAAAGAAAGCAAAAAGAGGAAGAATGGGCCTGGAAAACGAGGACCATCCACAGGCTCAAAAGCTGAGCAAATTAGGAAAAGAACAGGGAATAGGATTGCTGTCAATCTTGATCCTGAGCATGGAAGGCCGACTGATAAAGGCGTTTCAAGCCTCTTGTCTAATGAGTGTGGGAAGATTGTCAGGGAGAAATGCCCAATGGTGCATGAAACGTGGACAAAGATTTCCAGGGACGTGAAACATAACCTCAGAAAGGAGGTTGAAGTGAACTTTGAAGTTGATGTACAGCGCCCATCAATTATACATTACTTGAATAAGGTTATGGGTAAGGTGTACAGGGAGTTTAAATGCGAGTTGCACAAGCACTACAAAAAGATGAGGTCCCTTGAAGAGGCACTTGATAAACCCCCCAAGGCAATGATAGCTAGAAATGATCCAGATCAGTGGAAGTGTTTGTGTAAACATTTCTCAGAGGAAAAATTTAAGAGGAAAAGTGAAACCAATGCGAAAAATAGAGCTGGAAAGGAGTATGAGCACTGTGGAGGTTCTCGTCCTCATGGTCTATATTTTCAAGATAAAGTTCAGGAGGGTTCGAAGTTTCCCGCAATCGAGACCTTCAGAGTGACTCATCTCAAAAAGGGGAGTAATGAATGGATCAGTAACAAAGCTCAAGAACAATATGATAAGATGATTCTGAAAGAGGAGGCCTATCTACAAGGCTTGGCAGAGAAGCATCCAGATATTCCAATCAAAGAGTTGCCAATATCCCCTGAGGTCGGGATTGAGATTTTAAAGGAGGTACTTGGTGTGAAACCCAAACAACCAGTTCGTGGATTGGGCAGCTTTTGGGTAAATGAGACATCAACCTCCAGCATTATAGAGGAACTGGAGGAAGTTTATGCTGAACTTGAGAGGGAGAGGGCAATTCGGGCTAAAATTCAAGGAATGCTGAATAATGCCTATGAACGACTTAGTCAGCTTGATCCTAATTTTGAAGCGCCACAGCTTCACCTGGTTGATCCTAATATTGAAGCGCCCCAGCTTGACCTGAATGGTGATGAGAAGCATCAAACTCAATAG
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
Transposase_24

Protein Analysis

511

Amino Acids

56.88

Weight (kDa)

8.65

Isoelectric Point (pI)

42.13

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
Transposase_24 PF03004 296 - 434 3.5e-12 Plant transposase (Ptta/En/Spm family)
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
Loading...
Style Settings
Image
Tree File
Tip: Beautify your tree with professional tools

Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.

Publication-ready
iTOL Interactive Tree Of Life · Most popular EvolView Flexible annotations MEGA Desktop phylogenetics suite FigTree Desktop tree editor

Orthologous Genes (Group: OG0000260)

Species Orthologous Gene IDs
fragaria_vesca FvH4_1g01701 FvH4_4g03270
malus_domestica MD00G1017800.v1.1 MD00G1142300.v1.1 MD00G1145500.v1.1 MD00G1191000.v1.1 MD01G1112800.v1.1 MD01G1143700.v1.1 MD02G1048600.v1.1 MD02G1196000.v1.1 MD03G1062700.v1.1 MD03G1095500.v1.1 MD03G1095600.v1.1 MD03G1125500.v1.1 MD03G1154200.v1.1 MD03G1154300.v1.1 MD03G1170400.v1.1 MD03G1179800.v1.1 MD03G1196800.v1.1 MD03G1255700.v1.1 MD04G1029900.v1.1 MD04G1054700.v1.1 MD04G1102500.v1.1 MD04G1142700.v1.1 MD05G1052900.v1.1 MD05G1063000.v1.1 MD05G1069200.v1.1 MD05G1160700.v1.1 MD05G1235500.v1.1 MD05G1285100.v1.1 MD05G1321300.v1.1 MD07G1170900.v1.1 MD08G1072400.v1.1 MD08G1151000.v1.1 MD09G1075100.v1.1 MD11G1004200.v1.1 MD11G1134000.v1.1 MD11G1134100.v1.1 MD11G1150600.v1.1 MD11G1167200.v1.1 MD11G1169500.v1.1 MD11G1191200.v1.1 MD11G1215700.v1.1 MD12G1110400.v1.1 MD12G1226000.v1.1 MD14G1070600.v1.1 MD15G1246900.v1.1 MD15G1271300.v1.1 MD15G1304400.v1.1 MD15G1306500.v1.1 MD15G1394800.v1.1 MD16G1222400.v1.1 MD16G1235600.v1.1 MD16G1275200.v1.1 MD17G1164900.v1.1 MD17G1199400.v1.1 MD17G1200600.v1.1 MD17G1255500.v1.1
prunus_persica Prupe.5G199500_v2.0.a1
pyrus_communis pycom01g05550 pycom01g06510 pycom01g10640 pycom02g04780 pycom02g10380 pycom02g16940 pycom02g21170 pycom02g25250 pycom03g11350 pycom03g15980 pycom03g17500 pycom04g07430 pycom04g11390 pycom05g02890 pycom05g12620 pycom05g21240 pycom06g01740 pycom06g06680 pycom06g08420 pycom07g09890 pycom07g10330 pycom07g13390 pycom07g13400 pycom07g14390 pycom08g04050 pycom08g04060 pycom08g09610 pycom08g14690 pycom09g14670 pycom09g14680 pycom09g19450 pycom10g09940 pycom10g14290 pycom11g03600 pycom11g13710 pycom11g14810 pycom11g17720 pycom12g02240 pycom12g06830 pycom12g09950 pycom12g13060 pycom13g02180 pycom13g07740 pycom13g21900 pycom13g23040 pycom14g10400 pycom14g10410 pycom14g10490 pycom14g10680 pycom14g13340 pycom15g15950 pycom15g31530 pycom15g31550 pycom15g38660 pycom16g08600 pycom16g20570 pycom17g09630 pycom17g09650 pycom17g16800 pycom17g16830 pycom17g24070
rosa_chinensis RchiOBHm_Chr2g0086631
rosa_laevigata RLG00000015768
rosa_multiflora Rmu_co8061662.1_g000001 Rmu_co8118782.1_g000001
rosa_roxburghii Rroxscaffold_2G00154370
rosa_rugosa Rorug01G0468000
rosa_samantha Rh2AG019800 Rh2BG019700 Rh2BG019800 Rh2CG019500 Rh2DG020300
rosa_wichuraiana Rw2G001640

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AccB7I CCANNNNNTGG 1 cut(s) 1283
AccII CGCG 1 cut(s) 363
AclWI GGATC 6 cut(s) 204, 560, 881, 1115, 1430, 1466
AcsI RAATTY 2 cut(s) 932, 1389
AcuI CTGAAG 1 cut(s) 1054
AfaI GTAC 5 cut(s) 331, 418, 738, 788, 1254
AfiI CCNNNNNNNGG 9 cut(s) 14, 290, 291, 506, 575, 706, 844, 1229, 1283
AjiI CACGTC 2 cut(s) 264, 688
AjnI CCWGG 3 cut(s) 484, 680, 1464
AleI CACNNNNGTG 1 cut(s) 266
AluBI AGCT 8 cut(s) 518, 878, 971, 1121, 1296, 1432, 1459, 1495
AluI AGCT 8 cut(s) 518, 878, 971, 1121, 1296, 1432, 1459, 1495
Alw21I GWGCWC 2 cut(s) 263, 990
Alw26I GTCTC 6 cut(s) 191, 232, 245, 274, 1058, 1304
Alw44I GTGCAC 1 cut(s) 259
AlwI GGATC 6 cut(s) 204, 560, 881, 1115, 1430, 1466
AlwNI CAGNNNCTG 1 cut(s) 101
AoxI GGCC 5 cut(s) 16, 372, 482, 581, 1158
ApaI GGGCCC 1 cut(s) 20
ApaLI GTGCAC 1 cut(s) 259
ApeKI GCWGC 3 cut(s) 119, 308, 1293
ApoI RAATTY 2 cut(s) 932, 1389
AspLEI GCGC 3 cut(s) 744, 1453, 1489
AspS9I GGNCC 6 cut(s) 16, 17, 151, 482, 497, 834
AsuC2I CCSGG 1 cut(s) 286
AsuHPI GGTGA 5 cut(s) 19, 79, 103, 1454, 1520
AsuII TTCGAA 1 cut(s) 1046
AvaII GGWCC 3 cut(s) 151, 497, 834
AxyI CCTNAGG 1 cut(s) 1224
BaeGI GKGCMC 2 cut(s) 20, 263
BanII GRGCYC 2 cut(s) 20, 361
BarI GAAGNNNNNNTAC 2 cut(s) 720, 752
Bbv12I GWGCWC 2 cut(s) 263, 990
BbvI GCAGC 3 cut(s) 131, 295, 1305
BccI CCATC 4 cut(s) 41, 47, 508, 754
BceAI ACGGC 2 cut(s) 68, 89
BciT130I CCWGG 3 cut(s) 486, 682, 1466
BcnI CCSGG 1 cut(s) 286
BcoDI GTCTC 6 cut(s) 191, 232, 245, 274, 1058, 1304
BfaI CTAG 1 cut(s) 879
BfoI RGCGCY 3 cut(s) 745, 1454, 1490
BisI GCNGC 6 cut(s) 63, 66, 120, 178, 309, 1294
BlpI GCTNAGC 1 cut(s) 519
BlsI GCNGC 6 cut(s) 64, 67, 121, 179, 310, 1295
BmcAI AGTACT 1 cut(s) 331
Bme1390I CCNGG 4 cut(s) 286, 486, 682, 1466
Bme18I GGWCC 3 cut(s) 151, 497, 834
BmgBI CACGTC 2 cut(s) 264, 688
BmgT120I GGNCC 6 cut(s) 16, 17, 151, 482, 497, 834
BmiI GGNNCC 5 cut(s) 6, 18, 19, 153, 836
BmrFI CCNGG 4 cut(s) 286, 486, 682, 1466
BmsI GCATC 3 cut(s) 413, 1195, 1528
BplI GAGNNNNNCTC 2 cut(s) 343, 375
BpmI CTGGAG 2 cut(s) 1306, 1361
Bpu10I CCTNAGC 1 cut(s) 570
Bpu1102I GCTNAGC 1 cut(s) 519
Bpu14I TTCGAA 1 cut(s) 1046
BpuEI CTTGAG 2 cut(s) 1107, 1382
BpuMI CCSGG 1 cut(s) 286
BsaBI GATNNNNATC 1 cut(s) 891
BsaI GGTCTC 4 cut(s) 191, 232, 274, 1058
BsaJI CCNNGG 5 cut(s) 192, 284, 303, 681, 864
BsaXI ACNNNNNCTCC 2 cut(s) 242, 272
Bsc4I CCNNNNNNNGG 9 cut(s) 14, 290, 291, 506, 575, 706, 844, 1229, 1283
Bse118I RCCGGY 1 cut(s) 173
Bse1I ACTGG 4 cut(s) 418, 424, 1277, 1344
Bse21I CCTNAGG 1 cut(s) 1224
Bse3DI GCAATG 1 cut(s) 876
Bse8I GATNNNNATC 1 cut(s) 891
BseBI CCWGG 3 cut(s) 486, 682, 1466
BseDI CCNNGG 5 cut(s) 192, 284, 303, 681, 864
BseGI GGATG 3 cut(s) 51, 500, 1186
BseJI GATNNNNATC 1 cut(s) 891
BseLI CCNNNNNNNGG 9 cut(s) 14, 290, 291, 506, 575, 706, 844, 1229, 1283
BseMI GCAATG 1 cut(s) 876
BseMII CTCAG 9 cut(s) 108, 326, 347, 383, 510, 561, 715, 936, 1215
BseNI ACTGG 4 cut(s) 418, 424, 1277, 1344
BseRI GAGGAG 3 cut(s) 367, 398, 1169
BseSI GKGCMC 2 cut(s) 20, 263
BseXI GCAGC 3 cut(s) 131, 295, 1305
BseYI CCCAGC 1 cut(s) 1491
Bsh1236I CGCG 1 cut(s) 363
BshFI GGCC 5 cut(s) 18, 374, 484, 583, 1160
BsiHKAI GWGCWC 2 cut(s) 263, 990
BsiSI CCGG 2 cut(s) 174, 286
BslFI GGGAC 4 cut(s) 29, 307, 698, 820
BslI CCNNNNNNNGG 9 cut(s) 14, 290, 291, 506, 575, 706, 844, 1229, 1283
BsmAI GTCTC 6 cut(s) 191, 232, 245, 274, 1058, 1304
BsmFI GGGAC 4 cut(s) 29, 307, 698, 820
BsmI GAATGC 1 cut(s) 1404
BsnI GGCC 5 cut(s) 18, 374, 484, 583, 1160
Bso31I GGTCTC 4 cut(s) 191, 232, 274, 1058
Bsp119I TTCGAA 1 cut(s) 1046
Bsp120I GGGCCC 1 cut(s) 16
Bsp1286I GDGCHC 4 cut(s) 20, 263, 361, 990
Bsp1407I TGTACA 2 cut(s) 736, 786
Bsp143I GATC 8 cut(s) 157, 196, 565, 886, 892, 1107, 1435, 1471
Bsp1720I GCTNAGC 1 cut(s) 519
Bsp19I CCATGG 1 cut(s) 303
BspANI GGCC 5 cut(s) 18, 374, 484, 583, 1160
BspCNI CTCAG 9 cut(s) 107, 325, 346, 382, 511, 562, 714, 935, 1216
BspFNI CGCG 1 cut(s) 363
BspLI GGNNCC 5 cut(s) 6, 18, 19, 153, 836
BspPI GGATC 6 cut(s) 204, 560, 881, 1115, 1430, 1466
BspT104I TTCGAA 1 cut(s) 1046
BspTNI GGTCTC 4 cut(s) 191, 232, 274, 1058
BsrDI GCAATG 1 cut(s) 876
BsrFI RCCGGY 1 cut(s) 173
BsrGI TGTACA 2 cut(s) 736, 786
BsrI ACTGG 4 cut(s) 418, 424, 1277, 1344
BssAI RCCGGY 1 cut(s) 173
BssECI CCNNGG 5 cut(s) 192, 284, 303, 681, 864
BssMI GATC 8 cut(s) 157, 196, 565, 886, 892, 1107, 1435, 1471
BssT1I CCWWGG 2 cut(s) 303, 864
Bst2UI CCWGG 3 cut(s) 486, 682, 1466
Bst4CI ACNGT 4 cut(s) 25, 115, 132, 992
Bst6I CTCTTC 4 cut(s) 6, 230, 272, 837
BstAUI TGTACA 2 cut(s) 736, 786
BstBI TTCGAA 1 cut(s) 1046
BstC8I GCNNGC 1 cut(s) 361
BstDSI CCRYGG 1 cut(s) 303
BstENI CCTNNNNNAGG 2 cut(s) 704, 842
BstF5I GGATG 3 cut(s) 51, 500, 1186
BstFNI CGCG 1 cut(s) 363
BstH2I RGCGCY 3 cut(s) 745, 1454, 1490
BstHHI GCGC 3 cut(s) 744, 1453, 1489
BstKTI GATC 8 cut(s) 160, 199, 568, 889, 895, 1110, 1438, 1474
BstMAI GTCTC 6 cut(s) 191, 232, 245, 274, 1058, 1304
BstMBI GATC 8 cut(s) 157, 196, 565, 886, 892, 1107, 1435, 1471
BstMWI GCNNNNNNNGC 8 cut(s) 71, 80, 89, 317, 580, 603, 875, 1382
BstNI CCWGG 3 cut(s) 486, 682, 1466
BstSCI CCNGG 4 cut(s) 284, 484, 680, 1464
BstSLI GKGCMC 2 cut(s) 20, 263
BstUI CGCG 1 cut(s) 363
BstV1I GCAGC 3 cut(s) 131, 295, 1305
BstX2I RGATCY 1 cut(s) 196
BstXI CCANNNNNNTGG 1 cut(s) 897
BstYI RGATCY 1 cut(s) 196
Bsu36I CCTNAGG 1 cut(s) 1224
BsuRI GGCC 5 cut(s) 18, 374, 484, 583, 1160
BtgI CCRYGG 1 cut(s) 303
BtgZI GCGATG 2 cut(s) 19, 182
BtrI CACGTC 2 cut(s) 264, 688
BtsCI GGATG 3 cut(s) 51, 500, 1186
BtsIMutI CAGTG 3 cut(s) 273, 902, 988
Cac8I GCNNGC 1 cut(s) 361
CaiI CAGNNNCTG 1 cut(s) 101
CfoI GCGC 3 cut(s) 744, 1453, 1489
Cfr10I RCCGGY 1 cut(s) 173
Cfr13I GGNCC 6 cut(s) 16, 17, 151, 482, 497, 834
CsiI ACCWGGT 1 cut(s) 1464
Csp6I GTAC 5 cut(s) 330, 417, 737, 787, 1253
CviAII CATG 4 cut(s) 304, 575, 659, 1010
CviQI GTAC 5 cut(s) 330, 417, 737, 787, 1253
DpnI GATC 8 cut(s) 159, 198, 567, 888, 894, 1109, 1437, 1473
DpnII GATC 8 cut(s) 157, 196, 565, 886, 892, 1107, 1435, 1471
DraI TTTAAA 2 cut(s) 799, 1245
Eam1104I CTCTTC 4 cut(s) 6, 230, 272, 837
EarI CTCTTC 4 cut(s) 6, 230, 272, 837
EciI GGCGGA 1 cut(s) 61
Eco130I CCWWGG 2 cut(s) 303, 864
Eco147I AGGCCT 1 cut(s) 1160
Eco24I GRGCYC 2 cut(s) 20, 361
Eco31I GGTCTC 4 cut(s) 191, 232, 274, 1058
Eco47I GGWCC 3 cut(s) 151, 497, 834
Eco57I CTGAAG 1 cut(s) 1054
Eco81I CCTNAGG 1 cut(s) 1224
EcoNI CCTNNNNNAGG 2 cut(s) 704, 842
EcoO109I RGGNCCY 3 cut(s) 16, 17, 834
EcoRII CCWGG 3 cut(s) 484, 680, 1464
EcoT14I CCWWGG 2 cut(s) 303, 864
EcoT38I GRGCYC 2 cut(s) 20, 361
ErhI CCWWGG 2 cut(s) 303, 864
FaeI CATG 4 cut(s) 307, 578, 662, 1013
FalI AAGNNNNNCTT 2 cut(s) 834, 866
FaqI GGGAC 4 cut(s) 29, 307, 698, 820
FatI CATG 4 cut(s) 303, 574, 658, 1009
FauI CCCGC 2 cut(s) 220, 1063
Fnu4HI GCNGC 6 cut(s) 63, 66, 120, 178, 309, 1294
FokI GGATG 3 cut(s) 38, 487, 1173
FriOI GRGCYC 2 cut(s) 20, 361
Fsp4HI GCNGC 6 cut(s) 63, 66, 120, 178, 309, 1294
FspBI CTAG 1 cut(s) 879
GlaI GCGC 3 cut(s) 743, 1452, 1488
GluI GCNGC 6 cut(s) 63, 66, 120, 178, 309, 1294
GsaI CCCAGC 1 cut(s) 1495
GsuI CTGGAG 2 cut(s) 1306, 1361
HaeII RGCGCY 3 cut(s) 745, 1454, 1490
HaeIII GGCC 5 cut(s) 18, 374, 484, 583, 1160
HapII CCGG 2 cut(s) 174, 286
HhaI GCGC 3 cut(s) 744, 1453, 1489
Hin1II CATG 4 cut(s) 307, 578, 662, 1013
Hin6I GCGC 3 cut(s) 742, 1451, 1487
HinP1I GCGC 3 cut(s) 742, 1451, 1487
HinfI GANTC 4 cut(s) 98, 146, 1078, 1144
HpaII CCGG 2 cut(s) 174, 286
HphI GGTGA 5 cut(s) 19, 79, 103, 1454, 1520
Hpy166II GTNNAC 5 cut(s) 261, 669, 721, 787, 914
Hpy8I GTNNAC 5 cut(s) 261, 669, 721, 787, 914
Hpy99I CGWCG 2 cut(s) 110, 119
HpyAV CCTTC 4 cut(s) 58, 283, 573, 1078
HpyCH4III ACNGT 4 cut(s) 25, 115, 132, 992
HpyCH4IV ACGT 3 cut(s) 263, 665, 687
HpyCH4V TGCA 3 cut(s) 261, 658, 811
HpyF10VI GCNNNNNNNGC 8 cut(s) 71, 80, 89, 317, 580, 603, 875, 1382
HpySE526I ACGT 3 cut(s) 263, 665, 687
Hsp92II CATG 4 cut(s) 307, 578, 662, 1013
HspAI GCGC 3 cut(s) 742, 1451, 1487
Kzo9I GATC 8 cut(s) 157, 196, 565, 886, 892, 1107, 1435, 1471
Lsp1109I GCAGC 3 cut(s) 131, 295, 1305
LweI GCATC 3 cut(s) 413, 1195, 1528
MabI ACCWGGT 1 cut(s) 1464
MaeI CTAG 1 cut(s) 879
MaeII ACGT 3 cut(s) 263, 665, 687
MaeIII GTNAC 7 cut(s) 25, 85, 109, 388, 397, 1075, 1112
MalI GATC 8 cut(s) 159, 198, 567, 888, 894, 1109, 1437, 1473
MboI GATC 8 cut(s) 157, 196, 565, 886, 892, 1107, 1435, 1471
MboII GAAGA 7 cut(s) 23, 247, 289, 399, 487, 640, 854
MflI RGATCY 1 cut(s) 196
MhlI GDGCHC 4 cut(s) 20, 263, 361, 990
MluCI AATT 6 cut(s) 525, 750, 932, 1377, 1389, 1441
MlyI GAGTC 2 cut(s) 140, 1072
MmeI TCCRAC 1 cut(s) 161
MseI TTAA 3 cut(s) 798, 936, 1244
MslI CAYNNNNRTG 1 cut(s) 266
MspI CCGG 2 cut(s) 174, 286
MspR9I CCNGG 4 cut(s) 286, 486, 682, 1466
Mva1269I GAATGC 1 cut(s) 1404
MvaI CCWGG 3 cut(s) 486, 682, 1466
MvnI CGCG 1 cut(s) 363
MwoI GCNNNNNNNGC 8 cut(s) 71, 80, 89, 317, 580, 603, 875, 1382
NciI CCSGG 1 cut(s) 286
NcoI CCATGG 1 cut(s) 303
NdeII GATC 8 cut(s) 157, 196, 565, 886, 892, 1107, 1435, 1471
NlaIII CATG 4 cut(s) 307, 578, 662, 1013
NlaIV GGNNCC 5 cut(s) 6, 18, 19, 153, 836
NmuCI GTSAC 5 cut(s) 25, 85, 109, 397, 1075
NspV TTCGAA 1 cut(s) 1046
OliI CACNNNNGTG 1 cut(s) 266
PceI AGGCCT 1 cut(s) 1160
PctI GAATGC 1 cut(s) 1404
PfeI GAWTC 2 cut(s) 98, 1144
PflFI GACNNNGTC 2 cut(s) 298, 1425
PflMI CCANNNNNTGG 1 cut(s) 1283
PkrI GCNGC 6 cut(s) 64, 67, 121, 179, 310, 1295
PleI GAGTC 2 cut(s) 140, 1072
PpsI GAGTC 2 cut(s) 140, 1072
PpuMI RGGWCCY 1 cut(s) 834
Psp5II RGGWCCY 1 cut(s) 834
Psp6I CCWGG 3 cut(s) 484, 680, 1464
PspFI CCCAGC 1 cut(s) 1491
PspGI CCWGG 3 cut(s) 484, 680, 1464
PspN4I GGNNCC 5 cut(s) 6, 18, 19, 153, 836
PspOMI GGGCCC 1 cut(s) 16
PspPI GGNCC 6 cut(s) 16, 17, 151, 482, 497, 834
PspPPI RGGWCCY 1 cut(s) 834
PstNI CAGNNNCTG 1 cut(s) 101
PsuI RGATCY 1 cut(s) 196
PsyI GACNNNGTC 2 cut(s) 298, 1425
RsaI GTAC 5 cut(s) 331, 418, 738, 788, 1254
RsaNI GTAC 5 cut(s) 330, 417, 737, 787, 1253
RseI CAYNNNNRTG 1 cut(s) 266
SaqAI TTAA 3 cut(s) 798, 936, 1244
SatI GCNGC 6 cut(s) 63, 66, 120, 178, 309, 1294
Sau3AI GATC 8 cut(s) 157, 196, 565, 886, 892, 1107, 1435, 1471
Sau96I GGNCC 6 cut(s) 16, 17, 151, 482, 497, 834
ScaI AGTACT 1 cut(s) 331
SchI GAGTC 2 cut(s) 140, 1072
ScrFI CCNGG 4 cut(s) 286, 486, 682, 1466
SduI GDGCHC 4 cut(s) 20, 263, 361, 990
SexAI ACCWGGT 1 cut(s) 1464
SfaNI GCATC 3 cut(s) 413, 1195, 1528
SfuI TTCGAA 1 cut(s) 1046
SinI GGWCC 3 cut(s) 151, 497, 834
SmiMI CAYNNNNRTG 1 cut(s) 266
SmlI CTYRAG 2 cut(s) 1122, 1361
SmoI CTYRAG 2 cut(s) 1122, 1361
Sse9I AATT 6 cut(s) 525, 750, 932, 1377, 1389, 1441
SseBI AGGCCT 1 cut(s) 1160
SspI AATATT 1 cut(s) 1480
SspMI CTAG 1 cut(s) 879
StuI AGGCCT 1 cut(s) 1160
StyD4I CCNGG 4 cut(s) 284, 484, 680, 1464
StyI CCWWGG 2 cut(s) 303, 864
TaaI ACNGT 4 cut(s) 25, 115, 132, 992
TaiI ACGT 3 cut(s) 266, 668, 690
TaqI TCGA 3 cut(s) 201, 1046, 1062
TasI AATT 6 cut(s) 525, 750, 932, 1377, 1389, 1441
TatI WGTACW 3 cut(s) 329, 736, 786
TauI GCSGC 3 cut(s) 65, 68, 180
TfiI GAWTC 2 cut(s) 98, 1144
Tru1I TTAA 3 cut(s) 798, 936, 1244
Tru9I TTAA 3 cut(s) 798, 936, 1244
TscAI CASTG 3 cut(s) 273, 902, 995
TseFI GTSAC 5 cut(s) 25, 85, 109, 397, 1075
TseI GCWGC 3 cut(s) 119, 308, 1293
Tsp45I GTSAC 5 cut(s) 25, 85, 109, 397, 1075
TspDTI ATGAA 5 cut(s) 40, 335, 675, 1116, 1431
TspRI CASTG 3 cut(s) 273, 902, 995
Tth111I GACNNNGTC 2 cut(s) 298, 1425
Van91I CCANNNNNTGG 1 cut(s) 1283
VneI GTGCAC 1 cut(s) 259
VpaK11BI GGWCC 3 cut(s) 151, 497, 834
XagI CCTNNNNNAGG 2 cut(s) 704, 842
XapI RAATTY 2 cut(s) 932, 1389
XspI CTAG 1 cut(s) 879
ZrmI AGTACT 1 cut(s) 331
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.