MD05G1052900.v1.1

Plant transposase (Ptta/En/Spm family)

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
malus_domestica
Chr05
OG0000260
Physical Location & Seq
Reverse (-)
9032995 .. 9036915
3921 bp
Loading structure...
UTR
Exon/CDS
Intron
MD05G1052900.v1.1.491

Sequence Viewer

Length: 1170 bp
ATGACAGACCTTCACGCAAATCTCGAAGCCGACGCGAATCAAGTCCCAAAATCAAGGGTGTTGGCCTTCGAGAGCAAGGCAGAGCCTGATCTTAGTGTTACTGTTAATGGGTTGCACATGCCCAACCCGTTCGTTATCGGGTTGCCGCCCTGGACTAACTATACGGTGATGAAGAGGGCCTTTGATGAAGGCTGGGGTGCTGCGATTGCCAAAACTGTAATCCGGCGGCGCAGAACTGGAATTCAACTGTTGCAGACCAAGCTTCGGATTATTTTTCTGCCACATCGTGAATTGTTTGTAAATTGCAGCATAGTAGGAACTACAGAGTTCATTTATGATCTTGATGACGCATCCCCCGAGGTCATGGCCTACTTAGAGGGGACCTTAGCAAGCCGGTACAAAAATTGGAAGAACAATTTTCACAATCATTTTAAGAAATGGGATAATCTGGAGATTGCTCGCTTACATGTTCCAAGCGAATTGAATGACCGGCCAGAGGATTGGGAGTGGCTTTGCAAGCATTTTACGGGCCCAGACTTTGTGATAGCTCGAGTGTCAAAGACACTTCTCCACCATTCTGGTTCGAAGCCCTTTTCGTATAGGCTTGAGGAACGACGTCAGGAGGGTTCTAAGTTCCCAGAGATCGACATGTTCAAGGACGTTTACGTTCGACTTGGTAATGAAATCGTTGAGCAGTTTTATGATACTATGGTGGAAAAGAGCATTGCTGTTCTCCAAGAAGCAACATTGCAACTTCCCCCGGAGACTTCGATCGAGGACGTCATGGTACCAGAGGATGTAGGTTTTCAGATCATGACTGAAGTCCTGGATCAGAACCTTGGTCGTCGTCATGGCCAGGTTGTTCGGGGTATGGGGAAATCATGGGTTCGTGAGACGGGTGCCTTTTCTTCCAGATTGAACACATCATTGATGGATGAAGTGACAACCTTAAGGGGTAAGCTTGCGATCCAGGAAGAGCAGATGAAGGCCCAGGGCGAGCAGATGAAAGCGCAGCTGAGGGTCCAGAGCGAAGAGGTGAGGACCTATGCTGAGACGGTGAGAAACCTTGTACGAGCCATACAGATGGCCGGCCTACAAGTCTCGCTACCAGCACCTCATCTTGATCCACCTTTGACCTCAGAGCCACCTCACCCTCCCGATACTCAGTAG
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
Transposase_24

Protein Analysis

390

Amino Acids

44.47

Weight (kDa)

5.89

Isoelectric Point (pI)

45.68

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes (Group: OG0000260)

Species Orthologous Gene IDs
fragaria_vesca FvH4_1g01701 FvH4_4g03270
malus_domestica MD00G1017800.v1.1 MD00G1142300.v1.1 MD00G1145500.v1.1 MD00G1191000.v1.1 MD01G1112800.v1.1 MD01G1143700.v1.1 MD02G1048600.v1.1 MD02G1196000.v1.1 MD03G1062700.v1.1 MD03G1095500.v1.1 MD03G1095600.v1.1 MD03G1125500.v1.1 MD03G1154200.v1.1 MD03G1154300.v1.1 MD03G1170400.v1.1 MD03G1179800.v1.1 MD03G1196800.v1.1 MD03G1255700.v1.1 MD04G1029900.v1.1 MD04G1054700.v1.1 MD04G1102500.v1.1 MD04G1142700.v1.1 MD05G1052900.v1.1 MD05G1063000.v1.1 MD05G1069200.v1.1 MD05G1160700.v1.1 MD05G1235500.v1.1 MD05G1285100.v1.1 MD05G1321300.v1.1 MD07G1170900.v1.1 MD08G1072400.v1.1 MD08G1151000.v1.1 MD09G1075100.v1.1 MD11G1004200.v1.1 MD11G1134000.v1.1 MD11G1134100.v1.1 MD11G1150600.v1.1 MD11G1167200.v1.1 MD11G1169500.v1.1 MD11G1191200.v1.1 MD11G1215700.v1.1 MD12G1110400.v1.1 MD12G1226000.v1.1 MD14G1070600.v1.1 MD15G1246900.v1.1 MD15G1271300.v1.1 MD15G1304400.v1.1 MD15G1306500.v1.1 MD15G1394800.v1.1 MD16G1222400.v1.1 MD16G1235600.v1.1 MD16G1275200.v1.1 MD17G1164900.v1.1 MD17G1199400.v1.1 MD17G1200600.v1.1 MD17G1255500.v1.1
prunus_persica Prupe.5G199500_v2.0.a1
pyrus_communis pycom01g05550 pycom01g06510 pycom01g10640 pycom02g04780 pycom02g10380 pycom02g16940 pycom02g21170 pycom02g25250 pycom03g11350 pycom03g15980 pycom03g17500 pycom04g07430 pycom04g11390 pycom05g02890 pycom05g12620 pycom05g21240 pycom06g01740 pycom06g06680 pycom06g08420 pycom07g09890 pycom07g10330 pycom07g13390 pycom07g13400 pycom07g14390 pycom08g04050 pycom08g04060 pycom08g09610 pycom08g14690 pycom09g14670 pycom09g14680 pycom09g19450 pycom10g09940 pycom10g14290 pycom11g03600 pycom11g13710 pycom11g14810 pycom11g17720 pycom12g02240 pycom12g06830 pycom12g09950 pycom12g13060 pycom13g02180 pycom13g07740 pycom13g21900 pycom13g23040 pycom14g10400 pycom14g10410 pycom14g10490 pycom14g10680 pycom14g13340 pycom15g15950 pycom15g31530 pycom15g31550 pycom15g38660 pycom16g08600 pycom16g20570 pycom17g09630 pycom17g09650 pycom17g16800 pycom17g16830 pycom17g24070
rosa_chinensis RchiOBHm_Chr2g0086631
rosa_laevigata RLG00000015768
rosa_multiflora Rmu_co8061662.1_g000001 Rmu_co8118782.1_g000001
rosa_roxburghii Rroxscaffold_2G00154370
rosa_rugosa Rorug01G0468000
rosa_samantha Rh2AG019800 Rh2BG019700 Rh2BG019800 Rh2CG019500 Rh2DG020300
rosa_wichuraiana Rw2G001640

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AatII GACGTC 2 cut(s) 619, 783
Acc65I GGTACC 1 cut(s) 787
AccB1I GGYRCC 2 cut(s) 787, 899
AccII CGCG 1 cut(s) 35
AciI CCGC 2 cut(s) 146, 226
AclWI GGATC 3 cut(s) 837, 961, 1118
AcoI YGGCCR 3 cut(s) 491, 853, 1086
AcsI RAATTY 1 cut(s) 240
AcuI CTGAAG 1 cut(s) 840
AcyI GRCGYC 2 cut(s) 616, 780
AdeI CACNNNGTG 1 cut(s) 287
AfaI GTAC 3 cut(s) 398, 789, 1071
AfiI CCNNNNNNNGG 2 cut(s) 264, 496
AflII CTTAAG 1 cut(s) 949
AflIII ACRYGT 2 cut(s) 466, 648
AgsI TTSAA 4 cut(s) 245, 484, 655, 919
AjnI CCWGG 5 cut(s) 149, 825, 855, 969, 990
AluBI AGCT 4 cut(s) 262, 548, 961, 1015
AluI AGCT 4 cut(s) 262, 548, 961, 1015
Alw26I GTCTC 4 cut(s) 758, 887, 1046, 1105
AlwI GGATC 3 cut(s) 837, 961, 1118
AlwNI CAGNNNCTG 1 cut(s) 86
Ama87I CYCGRG 2 cut(s) 356, 549
AoxI GGCC 9 cut(s) 63, 177, 366, 491, 529, 853, 987, 1086, 1090
ApaI GGGCCC 1 cut(s) 533
ApeKI GCWGC 3 cut(s) 200, 306, 1012
ApoI RAATTY 1 cut(s) 240
Asp718I GGTACC 1 cut(s) 787
AspLEI GCGC 2 cut(s) 231, 1012
AspS9I GGNCC 7 cut(s) 177, 381, 529, 530, 988, 1021, 1041
AsuC2I CCSGG 1 cut(s) 761
AsuHPI GGTGA 4 cut(s) 178, 1048, 1069, 1142
AsuII TTCGAA 1 cut(s) 584
AvaI CYCGRG 2 cut(s) 356, 549
AvaII GGWCC 3 cut(s) 381, 1021, 1041
BaeGI GKGCMC 1 cut(s) 533
BaeI ACNNNNGTAYC 2 cut(s) 696, 729
BalI TGGCCA 1 cut(s) 855
BanI GGYRCC 2 cut(s) 787, 899
BanII GRGCYC 1 cut(s) 533
BbvCI CCTCAGC 1 cut(s) 1016
BbvI GCAGC 3 cut(s) 187, 318, 1024
BccI CCATC 2 cut(s) 925, 1078
BciT130I CCWGG 5 cut(s) 151, 827, 857, 971, 992
BcnI CCSGG 1 cut(s) 761
BcoDI GTCTC 4 cut(s) 758, 887, 1046, 1105
BfmI CTRYAG 1 cut(s) 321
BfrI CTTAAG 1 cut(s) 949
BisI GCNGC 5 cut(s) 146, 201, 227, 307, 1013
BlsI GCNGC 5 cut(s) 147, 202, 228, 308, 1014
Bme1390I CCNGG 6 cut(s) 151, 761, 827, 857, 971, 992
Bme18I GGWCC 3 cut(s) 381, 1021, 1041
BmeT110I CYCGRG 2 cut(s) 356, 549
BmgT120I GGNCC 7 cut(s) 177, 381, 529, 530, 988, 1021, 1041
BmiI GGNNCC 5 cut(s) 382, 531, 789, 901, 1022
BmrFI CCNGG 6 cut(s) 151, 761, 827, 857, 971, 992
BmsI GCATC 1 cut(s) 359
BoxI GACNNNNGTC 1 cut(s) 821
BpmI CTGGAG 1 cut(s) 470
Bpu10I CCTNAGC 2 cut(s) 385, 1016
Bpu14I TTCGAA 1 cut(s) 584
BpuEI CTTGAG 1 cut(s) 626
BpuMI CCSGG 1 cut(s) 761
BsaHI GRCGYC 2 cut(s) 616, 780
BsaJI CCNNGG 6 cut(s) 149, 357, 759, 838, 990, 991
Bsc4I CCNNNNNNNGG 2 cut(s) 264, 496
Bse118I RCCGGY 3 cut(s) 393, 489, 1088
Bse1I ACTGG 1 cut(s) 241
Bse3DI GCAATG 2 cut(s) 723, 746
BseBI CCWGG 5 cut(s) 151, 827, 857, 971, 992
BseDI CCNNGG 6 cut(s) 149, 357, 759, 838, 990, 991
BseGI GGATG 3 cut(s) 350, 802, 940
BseLI CCNNNNNNNGG 2 cut(s) 264, 496
BseMI GCAATG 2 cut(s) 723, 746
BseMII CTCAG 3 cut(s) 1007, 1041, 1152
BseNI ACTGG 1 cut(s) 241
BseSI GKGCMC 1 cut(s) 533
BseXI GCAGC 3 cut(s) 187, 318, 1024
BseYI CCCAGC 1 cut(s) 192
Bsh1236I CGCG 1 cut(s) 35
Bsh1285I CGRYCG 1 cut(s) 774
BshFI GGCC 9 cut(s) 65, 179, 368, 493, 531, 855, 989, 1088, 1092
BshNI GGYRCC 2 cut(s) 787, 899
BsiEI CGRYCG 1 cut(s) 774
BsiHKCI CYCGRG 2 cut(s) 356, 549
BsiSI CCGG 5 cut(s) 223, 394, 490, 761, 1089
BslFI GGGAC 2 cut(s) 29, 394
BslI CCNNNNNNNGG 2 cut(s) 264, 496
BsmAI GTCTC 4 cut(s) 758, 887, 1046, 1105
BsmBI CGTCTC 2 cut(s) 887, 1046
BsmFI GGGAC 2 cut(s) 29, 394
BsnI GGCC 9 cut(s) 65, 179, 368, 493, 531, 855, 989, 1088, 1092
BsoBI CYCGRG 2 cut(s) 356, 549
Bsp119I TTCGAA 1 cut(s) 584
Bsp120I GGGCCC 1 cut(s) 529
Bsp1286I GDGCHC 1 cut(s) 533
Bsp143I GATC 8 cut(s) 88, 337, 642, 771, 810, 829, 966, 1123
BspACI CCGC 2 cut(s) 146, 226
BspANI GGCC 9 cut(s) 65, 179, 368, 493, 531, 855, 989, 1088, 1092
BspCNI CTCAG 3 cut(s) 1008, 1042, 1151
BspFNI CGCG 1 cut(s) 35
BspHI TCATGA 1 cut(s) 813
BspLI GGNNCC 5 cut(s) 382, 531, 789, 901, 1022
BspPI GGATC 3 cut(s) 837, 961, 1118
BspQI GCTCTTC 1 cut(s) 969
BspT104I TTCGAA 1 cut(s) 584
BspT107I GGYRCC 2 cut(s) 787, 899
BspTI CTTAAG 1 cut(s) 949
BsrDI GCAATG 2 cut(s) 723, 746
BsrFI RCCGGY 3 cut(s) 393, 489, 1088
BsrI ACTGG 1 cut(s) 241
BssAI RCCGGY 3 cut(s) 393, 489, 1088
BssECI CCNNGG 6 cut(s) 149, 357, 759, 838, 990, 991
BssMI GATC 8 cut(s) 88, 337, 642, 771, 810, 829, 966, 1123
BssNI GRCGYC 2 cut(s) 616, 780
BssT1I CCWWGG 1 cut(s) 838
Bst2UI CCWGG 5 cut(s) 151, 827, 857, 971, 992
Bst4CI ACNGT 5 cut(s) 103, 166, 217, 249, 1057
Bst6I CTCTTC 3 cut(s) 167, 969, 1026
BstACI GRCGYC 2 cut(s) 616, 780
BstAFI CTTAAG 1 cut(s) 949
BstBI TTCGAA 1 cut(s) 584
BstC8I GCNNGC 6 cut(s) 391, 460, 518, 963, 998, 1090
BstDEI CTNAG 8 cut(s) 92, 373, 385, 630, 1016, 1050, 1138, 1164
BstF5I GGATG 3 cut(s) 350, 802, 940
BstFNI CGCG 1 cut(s) 35
BstHHI GCGC 2 cut(s) 231, 1012
BstKTI GATC 8 cut(s) 91, 340, 645, 774, 813, 832, 969, 1126
BstMAI GTCTC 4 cut(s) 758, 887, 1046, 1105
BstMBI GATC 8 cut(s) 88, 337, 642, 771, 810, 829, 966, 1123
BstMCI CGRYCG 1 cut(s) 774
BstMWI GCNNNNNNNGC 3 cut(s) 206, 259, 517
BstNI CCWGG 5 cut(s) 151, 827, 857, 971, 992
BstNSI RCATGY 3 cut(s) 121, 470, 652
BstPAI GACNNNNGTC 1 cut(s) 821
BstSCI CCNGG 6 cut(s) 149, 759, 825, 855, 969, 990
BstSFI CTRYAG 1 cut(s) 321
BstSLI GKGCMC 1 cut(s) 533
BstUI CGCG 1 cut(s) 35
BstV1I GCAGC 3 cut(s) 187, 318, 1024
BstXI CCANNNNNNTGG 3 cut(s) 501, 578, 1084
BsuRI GGCC 9 cut(s) 65, 179, 368, 493, 531, 855, 989, 1088, 1092
BtsCI GGATG 3 cut(s) 350, 802, 940
Cac8I GCNNGC 6 cut(s) 391, 460, 518, 963, 998, 1090
CaiI CAGNNNCTG 1 cut(s) 86
CciI TCATGA 1 cut(s) 813
CfoI GCGC 2 cut(s) 231, 1012
Cfr10I RCCGGY 3 cut(s) 393, 489, 1088
Cfr13I GGNCC 7 cut(s) 177, 381, 529, 530, 988, 1021, 1041
CseI GACGC 2 cut(s) 41, 356
Csp6I GTAC 3 cut(s) 397, 788, 1070
CviAII CATG 8 cut(s) 118, 364, 467, 649, 784, 814, 851, 882
CviQI GTAC 3 cut(s) 397, 788, 1070
DdeI CTNAG 8 cut(s) 92, 373, 385, 630, 1016, 1050, 1138, 1164
DpnI GATC 8 cut(s) 90, 339, 644, 773, 812, 831, 968, 1125
DpnII GATC 8 cut(s) 88, 337, 642, 771, 810, 829, 966, 1123
DraIII CACNNNGTG 1 cut(s) 287
EaeI YGGCCR 3 cut(s) 491, 853, 1086
Eam1104I CTCTTC 3 cut(s) 167, 969, 1026
EarI CTCTTC 3 cut(s) 167, 969, 1026
Eco130I CCWWGG 1 cut(s) 838
Eco24I GRGCYC 1 cut(s) 533
Eco47I GGWCC 3 cut(s) 381, 1021, 1041
Eco57I CTGAAG 1 cut(s) 840
Eco88I CYCGRG 2 cut(s) 356, 549
EcoO109I RGGNCCY 3 cut(s) 177, 381, 1041
EcoRI GAATTC 1 cut(s) 240
EcoRII CCWGG 5 cut(s) 149, 825, 855, 969, 990
EcoT14I CCWWGG 1 cut(s) 838
EcoT38I GRGCYC 1 cut(s) 533
ErhI CCWWGG 1 cut(s) 838
Esp3I CGTCTC 2 cut(s) 887, 1046
FaeI CATG 8 cut(s) 121, 367, 470, 652, 787, 817, 854, 885
FalI AAGNNNNNCTT 2 cut(s) 164, 196
FaqI GGGAC 2 cut(s) 29, 394
FatI CATG 8 cut(s) 117, 363, 466, 648, 783, 813, 850, 881
Fnu4HI GCNGC 5 cut(s) 146, 201, 227, 307, 1013
FokI GGATG 3 cut(s) 337, 809, 947
FriOI GRGCYC 1 cut(s) 533
FseI GGCCGGCC 1 cut(s) 1092
Fsp4HI GCNGC 5 cut(s) 146, 201, 227, 307, 1013
GlaI GCGC 2 cut(s) 230, 1011
GluI GCNGC 5 cut(s) 146, 201, 227, 307, 1013
GsaI CCCAGC 1 cut(s) 196
GsuI CTGGAG 1 cut(s) 470
HaeIII GGCC 9 cut(s) 65, 179, 368, 493, 531, 855, 989, 1088, 1092
HapII CCGG 5 cut(s) 223, 394, 490, 761, 1089
HgaI GACGC 2 cut(s) 41, 356
HhaI GCGC 2 cut(s) 231, 1012
Hin1I GRCGYC 2 cut(s) 616, 780
Hin1II CATG 8 cut(s) 121, 367, 470, 652, 787, 817, 854, 885
Hin6I GCGC 2 cut(s) 229, 1010
HinP1I GCGC 2 cut(s) 229, 1010
HindIII AAGCTT 2 cut(s) 260, 959
HinfI GANTC 1 cut(s) 37
HpaII CCGG 5 cut(s) 223, 394, 490, 761, 1089
HphI GGTGA 4 cut(s) 178, 1048, 1069, 1142
Hpy166II GTNNAC 1 cut(s) 664
Hpy188I TCNGA 4 cut(s) 267, 810, 834, 1141
Hpy8I GTNNAC 1 cut(s) 664
Hpy99I CGWCG 3 cut(s) 35, 618, 849
HpyAV CCTTC 4 cut(s) 20, 76, 182, 979
HpyCH4III ACNGT 5 cut(s) 103, 166, 217, 249, 1057
HpyCH4IV ACGT 4 cut(s) 616, 660, 666, 780
HpyCH4V TGCA 5 cut(s) 115, 253, 306, 516, 751
HpyF10VI GCNNNNNNNGC 3 cut(s) 206, 259, 517
HpyF3I CTNAG 8 cut(s) 92, 373, 385, 630, 1016, 1050, 1138, 1164
HpySE526I ACGT 4 cut(s) 616, 660, 666, 780
Hsp92I GRCGYC 2 cut(s) 616, 780
Hsp92II CATG 8 cut(s) 121, 367, 470, 652, 787, 817, 854, 885
HspAI GCGC 2 cut(s) 229, 1010
KpnI GGTACC 1 cut(s) 791
KroI GCCGGC 1 cut(s) 1088
KroNI GCCGGC 1 cut(s) 1090
Kzo9I GATC 8 cut(s) 88, 337, 642, 771, 810, 829, 966, 1123
LguI GCTCTTC 1 cut(s) 969
Lsp1109I GCAGC 3 cut(s) 187, 318, 1024
LweI GCATC 1 cut(s) 359
MaeII ACGT 4 cut(s) 616, 660, 666, 780
MaeIII GTNAC 2 cut(s) 97, 940
MalI GATC 8 cut(s) 90, 339, 644, 773, 812, 831, 968, 1125
MboI GATC 8 cut(s) 88, 337, 642, 771, 810, 829, 966, 1123
MboII GAAGA 5 cut(s) 184, 421, 900, 986, 1043
MhlI GDGCHC 1 cut(s) 533
MlsI TGGCCA 1 cut(s) 855
MluCI AATT 6 cut(s) 240, 290, 301, 403, 415, 479
MluNI TGGCCA 1 cut(s) 855
Mox20I TGGCCA 1 cut(s) 855
MroNI GCCGGC 1 cut(s) 1088
MscI TGGCCA 1 cut(s) 855
MseI TTAA 3 cut(s) 105, 432, 950
MslI CAYNNNNRTG 1 cut(s) 1082
Msp20I TGGCCA 1 cut(s) 855
MspA1I CMGCKG 1 cut(s) 1015
MspCI CTTAAG 1 cut(s) 949
MspI CCGG 5 cut(s) 223, 394, 490, 761, 1089
MspR9I CCNGG 6 cut(s) 151, 761, 827, 857, 971, 992
MvaI CCWGG 5 cut(s) 151, 827, 857, 971, 992
MvnI CGCG 1 cut(s) 35
MwoI GCNNNNNNNGC 3 cut(s) 206, 259, 517
NaeI GCCGGC 1 cut(s) 1090
NciI CCSGG 1 cut(s) 761
NdeII GATC 8 cut(s) 88, 337, 642, 771, 810, 829, 966, 1123
NgoMIV GCCGGC 1 cut(s) 1088
NlaIII CATG 8 cut(s) 121, 367, 470, 652, 787, 817, 854, 885
NlaIV GGNNCC 5 cut(s) 382, 531, 789, 901, 1022
NmuCI GTSAC 1 cut(s) 940
NspI RCATGY 3 cut(s) 121, 470, 652
NspV TTCGAA 1 cut(s) 584
PaeR7I CTCGAG 1 cut(s) 549
PagI TCATGA 1 cut(s) 813
PasI CCCWGGG 1 cut(s) 991
PciI ACATGT 2 cut(s) 466, 648
PciSI GCTCTTC 1 cut(s) 969
PcsI WCGNNNNNNNCGW 2 cut(s) 21, 354
PdiI GCCGGC 1 cut(s) 1090
PfeI GAWTC 1 cut(s) 37
PfoI TCCNGGA 2 cut(s) 825, 969
PkrI GCNGC 5 cut(s) 147, 202, 228, 308, 1014
Ple19I CGATCG 1 cut(s) 774
PpuMI RGGWCCY 2 cut(s) 381, 1041
PscI ACATGT 2 cut(s) 466, 648
PshAI GACNNNNGTC 1 cut(s) 821
Psp5II RGGWCCY 2 cut(s) 381, 1041
Psp6I CCWGG 5 cut(s) 149, 825, 855, 969, 990
PspFI CCCAGC 1 cut(s) 192
PspGI CCWGG 5 cut(s) 149, 825, 855, 969, 990
PspN4I GGNNCC 5 cut(s) 382, 531, 789, 901, 1022
PspOMI GGGCCC 1 cut(s) 529
PspPI GGNCC 7 cut(s) 177, 381, 529, 530, 988, 1021, 1041
PspPPI RGGWCCY 2 cut(s) 381, 1041
PspXI VCTCGAGB 1 cut(s) 549
PstNI CAGNNNCTG 1 cut(s) 86
PvuI CGATCG 1 cut(s) 774
PvuII CAGCTG 1 cut(s) 1015
RigI GGCCGGCC 1 cut(s) 1092
RsaI GTAC 3 cut(s) 398, 789, 1071
RsaNI GTAC 3 cut(s) 397, 788, 1070
RseI CAYNNNNRTG 1 cut(s) 1082
SapI GCTCTTC 1 cut(s) 969
SaqAI TTAA 3 cut(s) 105, 432, 950
SatI GCNGC 5 cut(s) 146, 201, 227, 307, 1013
Sau3AI GATC 8 cut(s) 88, 337, 642, 771, 810, 829, 966, 1123
Sau96I GGNCC 7 cut(s) 177, 381, 529, 530, 988, 1021, 1041
ScrFI CCNGG 6 cut(s) 151, 761, 827, 857, 971, 992
SduI GDGCHC 1 cut(s) 533
SfaNI GCATC 1 cut(s) 359
SfcI CTRYAG 1 cut(s) 321
Sfr274I CTCGAG 1 cut(s) 549
SfuI TTCGAA 1 cut(s) 584
SinI GGWCC 3 cut(s) 381, 1021, 1041
SlaI CTCGAG 1 cut(s) 549
SmiMI CAYNNNNRTG 1 cut(s) 1082
SmlI CTYRAG 3 cut(s) 549, 605, 949
SmoI CTYRAG 3 cut(s) 549, 605, 949
Sse9I AATT 6 cut(s) 240, 290, 301, 403, 415, 479
SsiI CCGC 2 cut(s) 146, 226
StyD4I CCNGG 6 cut(s) 149, 759, 825, 855, 969, 990
StyI CCWWGG 1 cut(s) 838
TaaI ACNGT 5 cut(s) 103, 166, 217, 249, 1057
TaiI ACGT 4 cut(s) 619, 663, 669, 783
TaqI TCGA 8 cut(s) 24, 69, 550, 584, 645, 670, 770, 774
TasI AATT 6 cut(s) 240, 290, 301, 403, 415, 479
TauI GCSGC 2 cut(s) 148, 229
TfiI GAWTC 1 cut(s) 37
Tru1I TTAA 3 cut(s) 105, 432, 950
Tru9I TTAA 3 cut(s) 105, 432, 950
TseFI GTSAC 1 cut(s) 940
TseI GCWGC 3 cut(s) 200, 306, 1012
Tsp45I GTSAC 1 cut(s) 940
TspDTI ATGAA 7 cut(s) 185, 201, 319, 696, 951, 998, 1019
Vha464I CTTAAG 1 cut(s) 949
VpaK11BI GGWCC 3 cut(s) 381, 1021, 1041
XapI RAATTY 1 cut(s) 240
XceI RCATGY 3 cut(s) 121, 470, 652
XhoI CTCGAG 1 cut(s) 549
ZraI GACGTC 2 cut(s) 617, 781
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.