pycom15g31530

Belongs to the multicopper oxidase family

Basic Information

Type: gene
Biological Identity
pyrus_communis
Chr15
Physical Location & Seq
Forward (+)
29999773 .. 30002019
2247 bp
Loading structure...
UTR
Exon/CDS
Intron
pycom15g31530.5

Sequence Viewer

Length: 771 bp
ATGGACCCTGGGTCGGCAAATTCGTTGGATCCAGTTGGTCCCTGGGTCTCCCAGGTGCCATCGTCATTAGCCTCTTCGGTGGCGCTACCTTTTAACGCCAGGCGTGGTCACCGTCGCCCCTGCACGCCTGACACGACATCGGCATCCACTACTGATGCCTCGGGGTCACAACCAGCAAAGAAAAACACACGGGTGACCAATGGACGTATCACGATTGATGACTGGCATCGGGCTACACCAACGACGGAGTTGCATAGCGCATTGGCCCACAACATTGGTCACAACATTCGGAGGGCGATGCCGGACGAGGTTGCTCTTGAGGAGGGTTGCCCAAAGGAGTTTGAGGACAGGGAAGATGATTGGGTAAGGCTCTGCAATCATTTTCAGGAGCCCAGCTATGTGGGGGTTCAAAATTCCCTGAGATCAATGTCTTCAACGATGTTTATGTTTGACCCAGGGATGAGTTGGCCGAGTCACTTCATGCAATTGGTTCTTCAAGAGTCTGCCTCCCATCTTCCTTCCGAAACTCCACTCAAGTTTATGGATCCCCCAAAGGATGTGGGGTTTCAAATCCTTACAGAGACCTTGGATCACACTCTCGGGCAAAGGTCGAAGACATATTGTAGGGGGATGGGGAATGCCCGGTGGCGAGAACCTAGAGCTTCTTCATCAGCGCAATCAAAGAGTCATGTGGCAGCTTTGACAGTAGACATGGTCGACCTTAGGACTGAGCTCGCCTCATATAAGAGCCAGATGTCACAGATTGTATAG
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
Pfam Domains
Protein Families

Protein Analysis

257

Amino Acids

28.4

Weight (kDa)

6.36

Isoelectric Point (pI)

58.75

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready

Orthologous Genes (Group: OG0000260)

Species Orthologous Gene IDs
fragaria_vesca FvH4_1g01701 FvH4_4g03270
malus_domestica MD00G1017800.v1.1 MD00G1142300.v1.1 MD00G1145500.v1.1 MD00G1191000.v1.1 MD01G1112800.v1.1 MD01G1143700.v1.1 MD02G1048600.v1.1 MD02G1196000.v1.1 MD03G1062700.v1.1 MD03G1095500.v1.1 MD03G1095600.v1.1 MD03G1125500.v1.1 MD03G1154200.v1.1 MD03G1154300.v1.1 MD03G1170400.v1.1 MD03G1179800.v1.1 MD03G1196800.v1.1 MD03G1255700.v1.1 MD04G1029900.v1.1 MD04G1054700.v1.1 MD04G1102500.v1.1 MD04G1142700.v1.1 MD05G1052900.v1.1 MD05G1063000.v1.1 MD05G1069200.v1.1 MD05G1160700.v1.1 MD05G1235500.v1.1 MD05G1285100.v1.1 MD05G1321300.v1.1 MD07G1170900.v1.1 MD08G1072400.v1.1 MD08G1151000.v1.1 MD09G1075100.v1.1 MD11G1004200.v1.1 MD11G1134000.v1.1 MD11G1134100.v1.1 MD11G1150600.v1.1 MD11G1167200.v1.1 MD11G1169500.v1.1 MD11G1191200.v1.1 MD11G1215700.v1.1 MD12G1110400.v1.1 MD12G1226000.v1.1 MD14G1070600.v1.1 MD15G1246900.v1.1 MD15G1271300.v1.1 MD15G1304400.v1.1 MD15G1306500.v1.1 MD15G1394800.v1.1 MD16G1222400.v1.1 MD16G1235600.v1.1 MD16G1275200.v1.1 MD17G1164900.v1.1 MD17G1199400.v1.1 MD17G1200600.v1.1 MD17G1255500.v1.1
prunus_persica Prupe.5G199500_v2.0.a1
pyrus_communis pycom01g05550 pycom01g06510 pycom01g10640 pycom02g04780 pycom02g10380 pycom02g16940 pycom02g21170 pycom02g25250 pycom03g11350 pycom03g15980 pycom03g17500 pycom04g07430 pycom04g11390 pycom05g02890 pycom05g12620 pycom05g21240 pycom06g01740 pycom06g06680 pycom06g08420 pycom07g09890 pycom07g10330 pycom07g13390 pycom07g13400 pycom07g14390 pycom08g04050 pycom08g04060 pycom08g09610 pycom08g14690 pycom09g14670 pycom09g14680 pycom09g19450 pycom10g09940 pycom10g14290 pycom11g03600 pycom11g13710 pycom11g14810 pycom11g17720 pycom12g02240 pycom12g06830 pycom12g09950 pycom12g13060 pycom13g02180 pycom13g07740 pycom13g21900 pycom13g23040 pycom14g10400 pycom14g10410 pycom14g10490 pycom14g10680 pycom14g13340 pycom15g15950 pycom15g31530 pycom15g31550 pycom15g38660 pycom16g08600 pycom16g20570 pycom17g09630 pycom17g09650 pycom17g16800 pycom17g16830 pycom17g24070
rosa_chinensis RchiOBHm_Chr2g0086631
rosa_laevigata RLG00000015768
rosa_multiflora Rmu_co8061662.1_g000001 Rmu_co8118782.1_g000001
rosa_roxburghii Rroxscaffold_2G00154370
rosa_rugosa Rorug01G0468000
rosa_samantha Rh2AG019800 Rh2BG019700 Rh2BG019800 Rh2CG019500 Rh2DG020300
rosa_wichuraiana Rw2G001640

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AccB1I GGYRCC 1 cut(s) 55
AccI GTMKAC 2 cut(s) 708, 717
AclWI GGATC 5 cut(s) 23, 36, 539, 552, 597
AcoI YGGCCR 1 cut(s) 467
AcsI RAATTY 2 cut(s) 19, 412
AfiI CCNNNNNNNGG 1 cut(s) 13
AgsI TTSAA 4 cut(s) 410, 435, 497, 569
AhdI GACNNNNNGTC 1 cut(s) 10
AjnI CCWGG 5 cut(s) 7, 41, 51, 98, 454
AleI CACNNNNGTG 1 cut(s) 191
AluBI AGCT 4 cut(s) 396, 662, 698, 733
AluI AGCT 4 cut(s) 396, 662, 698, 733
Alw21I GWGCWC 1 cut(s) 735
Alw26I GTCTC 2 cut(s) 52, 575
AlwI GGATC 5 cut(s) 23, 36, 539, 552, 597
Ama87I CYCGRG 2 cut(s) 160, 599
AoxI GGCC 2 cut(s) 264, 467
ApeKI GCWGC 1 cut(s) 695
ApoI RAATTY 2 cut(s) 19, 412
AspLEI GCGC 3 cut(s) 85, 260, 676
AspS9I GGNCC 3 cut(s) 4, 38, 265
AsuC2I CCSGG 1 cut(s) 643
AsuHPI GGTGA 2 cut(s) 101, 205
AvaI CYCGRG 2 cut(s) 160, 599
AvaII GGWCC 2 cut(s) 4, 38
AxyI CCTNAGG 1 cut(s) 722
BamHI GGATCC 2 cut(s) 28, 544
BanI GGYRCC 1 cut(s) 55
BanII GRGCYC 2 cut(s) 393, 735
BbsI GAAGAC 2 cut(s) 423, 620
Bbv12I GWGCWC 1 cut(s) 735
BbvI GCAGC 1 cut(s) 707
BccI CCATC 3 cut(s) 67, 519, 625
BcgI CGANNNNNNTGC 2 cut(s) 232, 266
BciT130I CCWGG 5 cut(s) 9, 43, 53, 100, 456
BcnI CCSGG 1 cut(s) 643
BcoDI GTCTC 2 cut(s) 52, 575
BfaI CTAG 1 cut(s) 657
BfoI RGCGCY 1 cut(s) 86
BisI GCNGC 1 cut(s) 696
BlsI GCNGC 1 cut(s) 697
Bme1390I CCNGG 6 cut(s) 9, 43, 53, 100, 456, 643
Bme18I GGWCC 2 cut(s) 4, 38
BmeRI GACNNNNNGTC 1 cut(s) 10
BmeT110I CYCGRG 2 cut(s) 160, 599
BmgT120I GGNCC 3 cut(s) 4, 38, 265
BmiI GGNNCC 6 cut(s) 6, 30, 40, 57, 390, 546
BmrFI CCNGG 6 cut(s) 9, 43, 53, 100, 456, 643
BmsI GCATC 4 cut(s) 145, 152, 235, 288
BpiI GAAGAC 2 cut(s) 423, 620
BplI GAGNNNNNCTC 4 cut(s) 491, 523, 722, 754
BpuEI CTTGAG 2 cut(s) 338, 518
BpuMI CCSGG 1 cut(s) 643
BsaI GGTCTC 2 cut(s) 52, 575
BsaJI CCNNGG 9 cut(s) 7, 8, 41, 42, 51, 159, 454, 455, 585
Bsc4I CCNNNNNNNGG 1 cut(s) 13
Bse1I ACTGG 2 cut(s) 32, 227
Bse21I CCTNAGG 1 cut(s) 722
BseBI CCWGG 5 cut(s) 9, 43, 53, 100, 456
BseDI CCNNGG 9 cut(s) 7, 8, 41, 42, 51, 159, 454, 455, 585
BseGI GGATG 4 cut(s) 143, 465, 562, 636
BseLI CCNNNNNNNGG 1 cut(s) 13
BseMII CTCAG 2 cut(s) 410, 720
BseNI ACTGG 2 cut(s) 32, 227
BseRI GAGGAG 1 cut(s) 335
BseXI GCAGC 1 cut(s) 707
BseYI CCCAGC 1 cut(s) 392
BsgI GTGCAG 1 cut(s) 106
BshFI GGCC 2 cut(s) 266, 469
BshNI GGYRCC 1 cut(s) 55
BsiHKAI GWGCWC 1 cut(s) 735
BsiHKCI CYCGRG 2 cut(s) 160, 599
BsiSI CCGG 2 cut(s) 302, 643
BslFI GGGAC 1 cut(s) 24
BslI CCNNNNNNNGG 1 cut(s) 13
BsmAI GTCTC 2 cut(s) 52, 575
BsmFI GGGAC 1 cut(s) 24
BsmI GAATGC 1 cut(s) 643
BsnI GGCC 2 cut(s) 266, 469
Bso31I GGTCTC 2 cut(s) 52, 575
BsoBI CYCGRG 2 cut(s) 160, 599
Bsp1286I GDGCHC 2 cut(s) 393, 735
Bsp143I GATC 4 cut(s) 28, 422, 544, 589
BspANI GGCC 2 cut(s) 266, 469
BspCNI CTCAG 2 cut(s) 411, 721
BspLI GGNNCC 6 cut(s) 6, 30, 40, 57, 390, 546
BspPI GGATC 5 cut(s) 23, 36, 539, 552, 597
BspT107I GGYRCC 1 cut(s) 55
BspTNI GGTCTC 2 cut(s) 52, 575
BsrI ACTGG 2 cut(s) 32, 227
BssECI CCNNGG 9 cut(s) 7, 8, 41, 42, 51, 159, 454, 455, 585
BssMI GATC 4 cut(s) 28, 422, 544, 589
BssT1I CCWWGG 1 cut(s) 585
Bst2UI CCWGG 5 cut(s) 9, 43, 53, 100, 456
Bst4CI ACNGT 2 cut(s) 113, 706
Bst6I CTCTTC 1 cut(s) 79
BstC8I GCNNGC 2 cut(s) 125, 735
BstDEI CTNAG 3 cut(s) 419, 722, 729
BstEII GGTNACC 2 cut(s) 107, 193
BstF5I GGATG 4 cut(s) 143, 465, 562, 636
BstH2I RGCGCY 1 cut(s) 86
BstHHI GCGC 3 cut(s) 85, 260, 676
BstKTI GATC 4 cut(s) 31, 425, 547, 592
BstMAI GTCTC 2 cut(s) 52, 575
BstMBI GATC 4 cut(s) 28, 422, 544, 589
BstNI CCWGG 5 cut(s) 9, 43, 53, 100, 456
BstPI GGTNACC 2 cut(s) 107, 193
BstSCI CCNGG 6 cut(s) 7, 41, 51, 98, 454, 641
BstV1I GCAGC 1 cut(s) 707
BstV2I GAAGAC 2 cut(s) 423, 620
BstX2I RGATCY 2 cut(s) 28, 544
BstXI CCANNNNNNTGG 2 cut(s) 275, 400
BstYI RGATCY 2 cut(s) 28, 544
Bsu36I CCTNAGG 1 cut(s) 722
BsuRI GGCC 2 cut(s) 266, 469
BtgZI GCGATG 1 cut(s) 311
BtsCI GGATG 4 cut(s) 143, 465, 562, 636
Cac8I GCNNGC 2 cut(s) 125, 735
CfoI GCGC 3 cut(s) 85, 260, 676
Cfr13I GGNCC 3 cut(s) 4, 38, 265
CspCI CAANNNNNGTGG 2 cut(s) 540, 575
CviAII CATG 3 cut(s) 481, 689, 712
DdeI CTNAG 3 cut(s) 419, 722, 729
DpnI GATC 4 cut(s) 30, 424, 546, 591
DpnII GATC 4 cut(s) 28, 422, 544, 589
DriI GACNNNNNGTC 1 cut(s) 10
EaeI YGGCCR 1 cut(s) 467
Eam1104I CTCTTC 1 cut(s) 79
Eam1105I GACNNNNNGTC 1 cut(s) 10
EarI CTCTTC 1 cut(s) 79
Ecl136II GAGCTC 1 cut(s) 733
Eco130I CCWWGG 1 cut(s) 585
Eco24I GRGCYC 2 cut(s) 393, 735
Eco31I GGTCTC 2 cut(s) 52, 575
Eco47I GGWCC 2 cut(s) 4, 38
Eco53kI GAGCTC 1 cut(s) 733
Eco81I CCTNAGG 1 cut(s) 722
Eco88I CYCGRG 2 cut(s) 160, 599
Eco91I GGTNACC 2 cut(s) 107, 193
EcoICRI GAGCTC 1 cut(s) 733
EcoO65I GGTNACC 2 cut(s) 107, 193
EcoRII CCWGG 5 cut(s) 7, 41, 51, 98, 454
EcoT14I CCWWGG 1 cut(s) 585
EcoT38I GRGCYC 2 cut(s) 393, 735
ErhI CCWWGG 1 cut(s) 585
FaeI CATG 3 cut(s) 484, 692, 715
FaqI GGGAC 1 cut(s) 24
FatI CATG 3 cut(s) 480, 688, 711
FblI GTMKAC 2 cut(s) 708, 717
Fnu4HI GCNGC 1 cut(s) 696
FokI GGATG 4 cut(s) 130, 472, 569, 643
FriOI GRGCYC 2 cut(s) 393, 735
Fsp4HI GCNGC 1 cut(s) 696
FspBI CTAG 1 cut(s) 657
GlaI GCGC 3 cut(s) 84, 259, 675
GluI GCNGC 1 cut(s) 696
GsaI CCCAGC 1 cut(s) 396
HaeII RGCGCY 1 cut(s) 86
HaeIII GGCC 2 cut(s) 266, 469
HapII CCGG 2 cut(s) 302, 643
HhaI GCGC 3 cut(s) 85, 260, 676
Hin1II CATG 3 cut(s) 484, 692, 715
Hin6I GCGC 3 cut(s) 83, 258, 674
HinP1I GCGC 3 cut(s) 83, 258, 674
HincII GTYRAC 1 cut(s) 718
HindII GTYRAC 1 cut(s) 718
HinfI GANTC 3 cut(s) 472, 500, 685
HpaII CCGG 2 cut(s) 302, 643
HphI GGTGA 2 cut(s) 101, 205
Hpy166II GTNNAC 2 cut(s) 709, 718
Hpy188I TCNGA 2 cut(s) 291, 523
Hpy188III TCNNGA 4 cut(s) 211, 317, 386, 497
Hpy8I GTNNAC 2 cut(s) 709, 718
Hpy99I CGWCG 2 cut(s) 117, 247
HpyAV CCTTC 1 cut(s) 528
HpyCH4III ACNGT 2 cut(s) 113, 706
HpyCH4IV ACGT 1 cut(s) 205
HpyCH4V TGCA 4 cut(s) 123, 253, 375, 484
HpyF3I CTNAG 3 cut(s) 419, 722, 729
HpySE526I ACGT 1 cut(s) 205
Hsp92II CATG 3 cut(s) 484, 692, 715
HspAI GCGC 3 cut(s) 83, 258, 674
Kzo9I GATC 4 cut(s) 28, 422, 544, 589
LmnI GCTCC 1 cut(s) 388
Lsp1109I GCAGC 1 cut(s) 707
LweI GCATC 4 cut(s) 145, 152, 235, 288
MaeI CTAG 1 cut(s) 657
MaeII ACGT 1 cut(s) 205
MaeIII GTNAC 6 cut(s) 107, 165, 193, 278, 473, 756
MalI GATC 4 cut(s) 30, 424, 546, 591
MboI GATC 4 cut(s) 28, 422, 544, 589
MboII GAAGA 7 cut(s) 66, 365, 423, 485, 506, 625, 657
MfeI CAATTG 1 cut(s) 485
MflI RGATCY 2 cut(s) 28, 544
MhlI GDGCHC 2 cut(s) 393, 735
MluCI AATT 3 cut(s) 19, 412, 485
MlyI GAGTC 3 cut(s) 481, 509, 694
MmeI TCCRAC 1 cut(s) 6
MnlI CCTC 9 cut(s) 82, 169, 285, 301, 313, 316, 337, 517, 748
MseI TTAA 1 cut(s) 93
MslI CAYNNNNRTG 1 cut(s) 191
MspI CCGG 2 cut(s) 302, 643
MspR9I CCNGG 6 cut(s) 9, 43, 53, 100, 456, 643
MunI CAATTG 1 cut(s) 485
Mva1269I GAATGC 1 cut(s) 643
MvaI CCWGG 5 cut(s) 9, 43, 53, 100, 456
NciI CCSGG 1 cut(s) 643
NdeII GATC 4 cut(s) 28, 422, 544, 589
NlaIII CATG 3 cut(s) 484, 692, 715
NlaIV GGNNCC 6 cut(s) 6, 30, 40, 57, 390, 546
NmeAIII GCCGAG 1 cut(s) 495
NmuCI GTSAC 6 cut(s) 107, 165, 193, 278, 473, 756
OliI CACNNNNGTG 1 cut(s) 191
PasI CCCWGGG 3 cut(s) 8, 42, 455
PcsI WCGNNNNNNNCGW 2 cut(s) 20, 131
PctI GAATGC 1 cut(s) 643
PflFI GACNNNGTC 1 cut(s) 713
PkrI GCNGC 1 cut(s) 697
PleI GAGTC 3 cut(s) 480, 508, 693
PpsI GAGTC 3 cut(s) 480, 508, 693
Psp124BI GAGCTC 1 cut(s) 735
Psp6I CCWGG 5 cut(s) 7, 41, 51, 98, 454
PspEI GGTNACC 2 cut(s) 107, 193
PspFI CCCAGC 1 cut(s) 392
PspGI CCWGG 5 cut(s) 7, 41, 51, 98, 454
PspN4I GGNNCC 6 cut(s) 6, 30, 40, 57, 390, 546
PspPI GGNCC 3 cut(s) 4, 38, 265
PsuI RGATCY 2 cut(s) 28, 544
PsyI GACNNNGTC 1 cut(s) 713
RseI CAYNNNNRTG 1 cut(s) 191
SacI GAGCTC 1 cut(s) 735
SalI GTCGAC 1 cut(s) 716
SaqAI TTAA 1 cut(s) 93
SatI GCNGC 1 cut(s) 696
Sau3AI GATC 4 cut(s) 28, 422, 544, 589
Sau96I GGNCC 3 cut(s) 4, 38, 265
SchI GAGTC 3 cut(s) 481, 509, 694
ScrFI CCNGG 6 cut(s) 9, 43, 53, 100, 456, 643
SduI GDGCHC 2 cut(s) 393, 735
SfaNI GCATC 4 cut(s) 145, 152, 235, 288
SinI GGWCC 2 cut(s) 4, 38
SmiMI CAYNNNNRTG 1 cut(s) 191
SmlI CTYRAG 2 cut(s) 317, 533
SmoI CTYRAG 2 cut(s) 317, 533
Sse9I AATT 3 cut(s) 19, 412, 485
SspMI CTAG 1 cut(s) 657
SstI GAGCTC 1 cut(s) 735
StyD4I CCNGG 6 cut(s) 7, 41, 51, 98, 454, 641
StyI CCWWGG 1 cut(s) 585
TaaI ACNGT 2 cut(s) 113, 706
TaiI ACGT 1 cut(s) 208
TaqI TCGA 2 cut(s) 611, 717
TasI AATT 3 cut(s) 19, 412, 485
Tru1I TTAA 1 cut(s) 93
Tru9I TTAA 1 cut(s) 93
TseFI GTSAC 6 cut(s) 107, 165, 193, 278, 473, 756
TseI GCWGC 1 cut(s) 695
Tsp45I GTSAC 6 cut(s) 107, 165, 193, 278, 473, 756
TspDTI ATGAA 2 cut(s) 469, 657
TspGWI ACGGA 1 cut(s) 260
Tth111I GACNNNGTC 1 cut(s) 713
VpaK11BI GGWCC 2 cut(s) 4, 38
XapI RAATTY 2 cut(s) 19, 412
XcmI CCANNNNNNNNNTGG 2 cut(s) 39, 462
XmiI GTMKAC 2 cut(s) 708, 717
XspI CTAG 1 cut(s) 657
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.