tRNA rRNA methyltransferase (SpoU) family protein
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| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AanI | TTATAA | 2 cut(s) | 461, 896 |
| AccI | GTMKAC | 1 cut(s) | 825 |
| AccII | CGCG | 1 cut(s) | 801 |
| AccIII | TCCGGA | 1 cut(s) | 253 |
| AciI | CCGC | 3 cut(s) | 610, 799, 847 |
| AclWI | GGATC | 3 cut(s) | 589, 602, 743 |
| AcsI | RAATTY | 2 cut(s) | 386, 947 |
| AcuI | CTGAAG | 2 cut(s) | 134, 529 |
| AfaI | GTAC | 3 cut(s) | 50, 345, 874 |
| AfiI | CCNNNNNNNGG | 2 cut(s) | 280, 653 |
| AgsI | TTSAA | 6 cut(s) | 71, 167, 211, 453, 474, 970 |
| AhdI | GACNNNNNGTC | 1 cut(s) | 650 |
| AjnI | CCWGG | 2 cut(s) | 373, 428 |
| AluBI | AGCT | 2 cut(s) | 564, 842 |
| AluI | AGCT | 2 cut(s) | 564, 842 |
| Alw26I | GTCTC | 2 cut(s) | 625, 759 |
| AlwI | GGATC | 3 cut(s) | 589, 602, 743 |
| Aor13HI | TCCGGA | 1 cut(s) | 253 |
| ApoI | RAATTY | 2 cut(s) | 386, 947 |
| AseI | ATTAAT | 3 cut(s) | 468, 488, 920 |
| Asp700I | GAANNNNTTC | 1 cut(s) | 119 |
| AspLEI | GCGC | 2 cut(s) | 316, 803 |
| AspS9I | GGNCC | 4 cut(s) | 127, 291, 426, 731 |
| AsuC2I | CCSGG | 1 cut(s) | 131 |
| AvaII | GGWCC | 4 cut(s) | 127, 291, 426, 731 |
| BamHI | GGATCC | 1 cut(s) | 594 |
| BanII | GRGCYC | 1 cut(s) | 790 |
| BbsI | GAAGAC | 1 cut(s) | 269 |
| BccI | CCATC | 1 cut(s) | 301 |
| BcgI | CGANNNNNNTGC | 2 cut(s) | 389, 423 |
| BciT130I | CCWGG | 2 cut(s) | 375, 430 |
| BclI | TGATCA | 1 cut(s) | 721 |
| BcnI | CCSGG | 1 cut(s) | 131 |
| BcoDI | GTCTC | 2 cut(s) | 625, 759 |
| BfaI | CTAG | 1 cut(s) | 642 |
| BfmI | CTRYAG | 1 cut(s) | 154 |
| Bme1390I | CCNGG | 3 cut(s) | 131, 375, 430 |
| Bme18I | GGWCC | 4 cut(s) | 127, 291, 426, 731 |
| BmeRI | GACNNNNNGTC | 1 cut(s) | 650 |
| BmgT120I | GGNCC | 4 cut(s) | 127, 291, 426, 731 |
| BmiI | GGNNCC | 1 cut(s) | 596 |
| BmrFI | CCNGG | 3 cut(s) | 131, 375, 430 |
| BmrI | ACTGGG | 1 cut(s) | 803 |
| BmsI | GCATC | 1 cut(s) | 597 |
| BmuI | ACTGGG | 1 cut(s) | 803 |
| BpiI | GAAGAC | 1 cut(s) | 269 |
| BplI | GAGNNNNNCTC | 2 cut(s) | 541, 573 |
| BpuMI | CCSGG | 1 cut(s) | 131 |
| BsaAI | YACGTR | 1 cut(s) | 48 |
| BsaJI | CCNNGG | 4 cut(s) | 374, 429, 602, 648 |
| BsaWI | WCCGGW | 1 cut(s) | 253 |
| Bsc4I | CCNNNNNNNGG | 2 cut(s) | 280, 653 |
| Bse1I | ACTGG | 2 cut(s) | 534, 809 |
| BseAI | TCCGGA | 1 cut(s) | 253 |
| BseBI | CCWGG | 2 cut(s) | 375, 430 |
| BseDI | CCNNGG | 4 cut(s) | 374, 429, 602, 648 |
| BseGI | GGATG | 4 cut(s) | 439, 612, 620, 670 |
| BseLI | CCNNNNNNNGG | 2 cut(s) | 280, 653 |
| BseMII | CTCAG | 2 cut(s) | 583, 749 |
| BseNI | ACTGG | 2 cut(s) | 534, 809 |
| BseRI | GAGGAG | 2 cut(s) | 116, 747 |
| BseYI | CCCAGC | 2 cut(s) | 560, 838 |
| Bsh1236I | CGCG | 1 cut(s) | 801 |
| Bsh1285I | CGRYCG | 2 cut(s) | 584, 654 |
| BsiEI | CGRYCG | 2 cut(s) | 584, 654 |
| BsiSI | CCGG | 2 cut(s) | 130, 254 |
| BslI | CCNNNNNNNGG | 2 cut(s) | 280, 653 |
| BsmAI | GTCTC | 2 cut(s) | 625, 759 |
| BsmBI | CGTCTC | 2 cut(s) | 625, 759 |
| BsmI | GAATGC | 1 cut(s) | 448 |
| Bsp1286I | GDGCHC | 1 cut(s) | 790 |
| Bsp13I | TCCGGA | 1 cut(s) | 253 |
| Bsp1407I | TGTACA | 1 cut(s) | 872 |
| Bsp143I | GATC | 6 cut(s) | 246, 396, 581, 594, 721, 748 |
| BspACI | CCGC | 3 cut(s) | 610, 799, 847 |
| BspCNI | CTCAG | 2 cut(s) | 582, 748 |
| BspEI | TCCGGA | 1 cut(s) | 253 |
| BspFNI | CGCG | 1 cut(s) | 801 |
| BspLI | GGNNCC | 1 cut(s) | 596 |
| BspMAI | CTGCAG | 1 cut(s) | 158 |
| BspPI | GGATC | 3 cut(s) | 589, 602, 743 |
| BspQI | GCTCTTC | 1 cut(s) | 68 |
| BsrGI | TGTACA | 1 cut(s) | 872 |
| BsrI | ACTGG | 2 cut(s) | 534, 809 |
| BssECI | CCNNGG | 4 cut(s) | 374, 429, 602, 648 |
| BssMI | GATC | 6 cut(s) | 246, 396, 581, 594, 721, 748 |
| BssT1I | CCWWGG | 1 cut(s) | 602 |
| Bst2UI | CCWGG | 2 cut(s) | 375, 430 |
| Bst6I | CTCTTC | 3 cut(s) | 68, 273, 672 |
| BstAUI | TGTACA | 1 cut(s) | 872 |
| BstBAI | YACGTR | 1 cut(s) | 48 |
| BstDEI | CTNAG | 2 cut(s) | 569, 735 |
| BstF5I | GGATG | 4 cut(s) | 439, 612, 620, 670 |
| BstFNI | CGCG | 1 cut(s) | 801 |
| BstHHI | GCGC | 2 cut(s) | 316, 803 |
| BstKTI | GATC | 6 cut(s) | 249, 399, 584, 597, 724, 751 |
| BstMAI | GTCTC | 2 cut(s) | 625, 759 |
| BstMBI | GATC | 6 cut(s) | 246, 396, 581, 594, 721, 748 |
| BstMCI | CGRYCG | 2 cut(s) | 584, 654 |
| BstNI | CCWGG | 2 cut(s) | 375, 430 |
| BstSCI | CCNGG | 3 cut(s) | 129, 373, 428 |
| BstSFI | CTRYAG | 1 cut(s) | 154 |
| BstUI | CGCG | 1 cut(s) | 801 |
| BstV2I | GAAGAC | 1 cut(s) | 269 |
| BstX2I | RGATCY | 1 cut(s) | 594 |
| BstYI | RGATCY | 1 cut(s) | 594 |
| BtsCI | GGATG | 4 cut(s) | 439, 612, 620, 670 |
| CfoI | GCGC | 2 cut(s) | 316, 803 |
| Cfr13I | GGNCC | 4 cut(s) | 127, 291, 426, 731 |
| Csp6I | GTAC | 3 cut(s) | 49, 344, 873 |
| CspCI | CAANNNNNGTGG | 2 cut(s) | 503, 538 |
| CviJI | RGCY | 6 cut(s) | 61, 533, 564, 664, 788, 842 |
| CviKI_1 | RGCY | 6 cut(s) | 61, 533, 564, 664, 788, 842 |
| CviQI | GTAC | 3 cut(s) | 49, 344, 873 |
| DdeI | CTNAG | 2 cut(s) | 569, 735 |
| DpnI | GATC | 6 cut(s) | 248, 398, 583, 596, 723, 750 |
| DpnII | GATC | 6 cut(s) | 246, 396, 581, 594, 721, 748 |
| DraI | TTTAAA | 1 cut(s) | 859 |
| DriI | GACNNNNNGTC | 1 cut(s) | 650 |
| Eam1104I | CTCTTC | 3 cut(s) | 68, 273, 672 |
| Eam1105I | GACNNNNNGTC | 1 cut(s) | 650 |
| EarI | CTCTTC | 3 cut(s) | 68, 273, 672 |
| Eco130I | CCWWGG | 1 cut(s) | 602 |
| Eco24I | GRGCYC | 1 cut(s) | 790 |
| Eco47I | GGWCC | 4 cut(s) | 127, 291, 426, 731 |
| Eco57I | CTGAAG | 2 cut(s) | 134, 529 |
| EcoO109I | RGGNCCY | 2 cut(s) | 291, 731 |
| EcoRII | CCWGG | 2 cut(s) | 373, 428 |
| EcoT14I | CCWWGG | 1 cut(s) | 602 |
| EcoT38I | GRGCYC | 1 cut(s) | 790 |
| ErhI | CCWWGG | 1 cut(s) | 602 |
| Esp3I | CGTCTC | 2 cut(s) | 625, 759 |
| FauI | CCCGC | 2 cut(s) | 603, 854 |
| FbaI | TGATCA | 1 cut(s) | 721 |
| FblI | GTMKAC | 1 cut(s) | 825 |
| FokI | GGATG | 4 cut(s) | 446, 607, 619, 657 |
| FriOI | GRGCYC | 1 cut(s) | 790 |
| FspBI | CTAG | 1 cut(s) | 642 |
| GlaI | GCGC | 2 cut(s) | 315, 802 |
| GsaI | CCCAGC | 2 cut(s) | 564, 842 |
| HapII | CCGG | 2 cut(s) | 130, 254 |
| HhaI | GCGC | 2 cut(s) | 316, 803 |
| Hin6I | GCGC | 2 cut(s) | 314, 801 |
| HinP1I | GCGC | 2 cut(s) | 314, 801 |
| HincII | GTYRAC | 1 cut(s) | 826 |
| HindII | GTYRAC | 1 cut(s) | 826 |
| HinfI | GANTC | 5 cut(s) | 83, 265, 550, 586, 707 |
| HpaII | CCGG | 2 cut(s) | 130, 254 |
| Hpy166II | GTNNAC | 1 cut(s) | 826 |
| Hpy188I | TCNGA | 5 cut(s) | 114, 572, 656, 818, 833 |
| Hpy188III | TCNNGA | 3 cut(s) | 167, 254, 547 |
| Hpy8I | GTNNAC | 1 cut(s) | 826 |
| Hpy99I | CGWCG | 2 cut(s) | 404, 827 |
| HpyAV | CCTTC | 5 cut(s) | 223, 229, 304, 608, 678 |
| HpyCH4IV | ACGT | 4 cut(s) | 47, 402, 414, 634 |
| HpyCH4V | TGCA | 3 cut(s) | 4, 28, 156 |
| HpyF3I | CTNAG | 2 cut(s) | 569, 735 |
| HpySE526I | ACGT | 4 cut(s) | 47, 402, 414, 634 |
| HspAI | GCGC | 2 cut(s) | 314, 801 |
| Kpn2I | TCCGGA | 1 cut(s) | 253 |
| Ksp22I | TGATCA | 1 cut(s) | 721 |
| Kzo9I | GATC | 6 cut(s) | 246, 396, 581, 594, 721, 748 |
| LguI | GCTCTTC | 1 cut(s) | 68 |
| LweI | GCATC | 1 cut(s) | 597 |
| MaeI | CTAG | 1 cut(s) | 642 |
| MaeII | ACGT | 4 cut(s) | 47, 402, 414, 634 |
| MaeIII | GTNAC | 3 cut(s) | 91, 217, 693 |
| MalI | GATC | 6 cut(s) | 248, 398, 583, 596, 723, 750 |
| MboI | GATC | 6 cut(s) | 246, 396, 581, 594, 721, 748 |
| MboII | GAAGA | 7 cut(s) | 55, 146, 260, 271, 274, 535, 659 |
| MflI | RGATCY | 1 cut(s) | 594 |
| MhlI | GDGCHC | 1 cut(s) | 790 |
| MlyI | GAGTC | 4 cut(s) | 259, 559, 595, 701 |
| MmeI | TCCRAC | 3 cut(s) | 617, 634, 856 |
| MroI | TCCGGA | 1 cut(s) | 253 |
| MroXI | GAANNNNTTC | 1 cut(s) | 119 |
| MseI | TTAA | 7 cut(s) | 192, 392, 468, 488, 858, 920, 945 |
| MspI | CCGG | 2 cut(s) | 130, 254 |
| MspR9I | CCNGG | 3 cut(s) | 131, 375, 430 |
| Mva1269I | GAATGC | 1 cut(s) | 448 |
| MvaI | CCWGG | 2 cut(s) | 375, 430 |
| MvnI | CGCG | 1 cut(s) | 801 |
| NciI | CCSGG | 1 cut(s) | 131 |
| NdeII | GATC | 6 cut(s) | 246, 396, 581, 594, 721, 748 |
| NlaIV | GGNNCC | 1 cut(s) | 596 |
| NmuCI | GTSAC | 2 cut(s) | 91, 693 |
| PciSI | GCTCTTC | 1 cut(s) | 68 |
| PctI | GAATGC | 1 cut(s) | 448 |
| PdmI | GAANNNNTTC | 1 cut(s) | 119 |
| PfeI | GAWTC | 1 cut(s) | 83 |
| PflFI | GACNNNGTC | 1 cut(s) | 440 |
| Ple19I | CGATCG | 1 cut(s) | 584 |
| PleI | GAGTC | 4 cut(s) | 259, 558, 594, 701 |
| PpsI | GAGTC | 4 cut(s) | 259, 558, 594, 701 |
| Ppu21I | YACGTR | 1 cut(s) | 48 |
| PpuMI | RGGWCCY | 2 cut(s) | 291, 731 |
| PshBI | ATTAAT | 3 cut(s) | 468, 488, 920 |
| PsiI | TTATAA | 2 cut(s) | 461, 896 |
| Psp5II | RGGWCCY | 2 cut(s) | 291, 731 |
| Psp6I | CCWGG | 2 cut(s) | 373, 428 |
| PspFI | CCCAGC | 2 cut(s) | 560, 838 |
| PspGI | CCWGG | 2 cut(s) | 373, 428 |
| PspN4I | GGNNCC | 1 cut(s) | 596 |
| PspPI | GGNCC | 4 cut(s) | 127, 291, 426, 731 |
| PspPPI | RGGWCCY | 2 cut(s) | 291, 731 |
| PstI | CTGCAG | 1 cut(s) | 158 |
| PsuI | RGATCY | 1 cut(s) | 594 |
| PsyI | GACNNNGTC | 1 cut(s) | 440 |
| PvuI | CGATCG | 1 cut(s) | 584 |
| RsaI | GTAC | 3 cut(s) | 50, 345, 874 |
| RsaNI | GTAC | 3 cut(s) | 49, 344, 873 |
| SalI | GTCGAC | 1 cut(s) | 824 |
| SapI | GCTCTTC | 1 cut(s) | 68 |
| SaqAI | TTAA | 7 cut(s) | 192, 392, 468, 488, 858, 920, 945 |
| Sau3AI | GATC | 6 cut(s) | 246, 396, 581, 594, 721, 748 |
| Sau96I | GGNCC | 4 cut(s) | 127, 291, 426, 731 |
| SchI | GAGTC | 4 cut(s) | 259, 559, 595, 701 |
| ScrFI | CCNGG | 3 cut(s) | 131, 375, 430 |
| SduI | GDGCHC | 1 cut(s) | 790 |
| SfaNI | GCATC | 1 cut(s) | 597 |
| SfcI | CTRYAG | 1 cut(s) | 154 |
| SinI | GGWCC | 4 cut(s) | 127, 291, 426, 731 |
| SsiI | CCGC | 3 cut(s) | 610, 799, 847 |
| SspI | AATATT | 1 cut(s) | 492 |
| SspMI | CTAG | 1 cut(s) | 642 |
| StyD4I | CCNGG | 3 cut(s) | 129, 373, 428 |
| StyI | CCWWGG | 1 cut(s) | 602 |
| TaiI | ACGT | 4 cut(s) | 50, 405, 417, 637 |
| TaqI | TCGA | 8 cut(s) | 99, 123, 399, 444, 584, 682, 760, 825 |
| TaqII | GACCGA | 1 cut(s) | 640 |
| TatI | WGTACW | 1 cut(s) | 872 |
| TfiI | GAWTC | 1 cut(s) | 83 |
| Tru1I | TTAA | 7 cut(s) | 192, 392, 468, 488, 858, 920, 945 |
| Tru9I | TTAA | 7 cut(s) | 192, 392, 468, 488, 858, 920, 945 |
| TseFI | GTSAC | 2 cut(s) | 91, 693 |
| Tsp45I | GTSAC | 2 cut(s) | 91, 693 |
| TspDTI | ATGAA | 5 cut(s) | 497, 659, 674, 874, 906 |
| TspGWI | ACGGA | 3 cut(s) | 331, 734, 741 |
| Tth111I | GACNNNGTC | 1 cut(s) | 440 |
| VpaK11BI | GGWCC | 4 cut(s) | 127, 291, 426, 731 |
| VspI | ATTAAT | 3 cut(s) | 468, 488, 920 |
| XapI | RAATTY | 2 cut(s) | 386, 947 |
| XcmI | CCANNNNNNNNNTGG | 1 cut(s) | 436 |
| XmiI | GTMKAC | 1 cut(s) | 825 |
| XmnI | GAANNNNTTC | 1 cut(s) | 119 |
| XspI | CTAG | 1 cut(s) | 642 |