RchiOBHm_Chr0c11g0499451

ubiquitin-protein transferase activity

Design Primers CRISPR Design

Basic Information

Type: Sequence Only
Biological Identity
rosa_chinensis
Unknown
OG0000056
Physical Location & Seq
Reverse (-)
0 .. 0
1 bp
Loading structure...
UTR
Exon/CDS
Intron
N/A

Sequence Viewer

Length: 738 bp
ATGTCGTCCAACGTGGTCACTGAGGCACACAAGTTTTATACTGAAGTGAAGCAAAGAGCAATAACAAAGTTGGTAAATCCAAAAGGCTTTCTCCATGTCACATTAAGATTCTACAGGCATTTTGCAACTCAAAGTTGTACTGGTGGTGCTCGAGGACCCGTTATGTATGACGTACCAACCGTTATAAGTGAAAGGAAGATTATGATTCCTATCTCAGATGTCAAGCTAGAACCCAGAAGGTGTGAGTGGCCAAAGGTCATGGCTGATCAGCTTTCCAGCATGGGTATCCCTGAAGCTCAGCAGCCGCATATATTGGAAAAAACATTTGAGGTGGCTCAAGTGACCAACCCCGAGTTGCGAATTAATGTGATGATGGTGTACCTGACTGTGTACAGGTTCGACAACTGTATTGATAGGGTCATAACAGATTCCTTGGATGCGGACAAAGGGAAGCTTATCCCTGCAGCTAAATCATCCATCCAGTGCTTAGAGAAATTGAGACTTGATAGTTTGGAGTCGGAAGCTATTATTAGACAGACGCCATGTGCTATTTGCTGTGACAGCCTCGGTCACCTTGATGCTGGAGAAGATGAGGCTGTGGCTGTTGATCATCAACAGATGATAACTCGCTTACCCTGCCAGCACCATTATCATGCAGATTGCATTGTCCCGTGGCTGGAGATCAATCACTTGTGTCCTTTGTGCCGATACCCAATGCCTTTTGCAGGCAAGCCATGA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
zf-RING_2 zf-rbx1

Protein Analysis

245

Amino Acids

27.75

Weight (kDa)

6.55

Isoelectric Point (pI)

43.11

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
zf-RING_2 PF13639 182 - 236 3e-07 Ring finger domain
zf-rbx1 PF12678 182 - 236 2.8e-07 RING-H2 zinc finger domain
zf-C3HC4_2 PF13923 209 - 235 5.2e-06 Zinc finger, C3HC4 type (RING finger)
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes (Group: OG0000056)

Species Orthologous Gene IDs
arabidopsis_thaliana AT1G74620
fragaria_vesca FvH4_1g17310 FvH4_1g21860 FvH4_2g00301 FvH4_2g00500 FvH4_2g00510 FvH4_2g01040 FvH4_2g01040 FvH4_2g01040 FvH4_2g01511 FvH4_2g01521 FvH4_2g05410 FvH4_2g15860 FvH4_2g16170 FvH4_2g20442 FvH4_3g22600 FvH4_4g03111 FvH4_4g31810 FvH4_4g31840 FvH4_4g33571 FvH4_4g33580 FvH4_4g33600 FvH4_4g33620 FvH4_4g33620 FvH4_5g04820 FvH4_5g04820 FvH4_5g04821 FvH4_5g04821 FvH4_5g04830 FvH4_5g04833 FvH4_5g04833 FvH4_5g04834 FvH4_5g05562 FvH4_5g06150 FvH4_5g07970 FvH4_5g09910 FvH4_5g11280 FvH4_5g12010 FvH4_6g06910 FvH4_6g11580 FvH4_6g15110 FvH4_6g24322 FvH4_6g31360 FvH4_6g34080 FvH4_6g44500 FvH4_6g47060 FvH4_6g50581 FvH4_6g50641 FvH4_6g50650 FvH4_6g50650 FvH4_6g50981 FvH4_6g51090 FvH4_6g51180 FvH4_6g51730 FvH4_6g51740 FvH4_6g51870 FvH4_6g52331 FvH4_6g52340 FvH4_6g52350 FvH4_6g52530 FvH4_6g52530
malus_domestica MD14G1195700.v1.1
prunus_persica Prupe.6G084800_v2.0.a1 Prupe.7G084100_v2.0.a1 Prupe.8G048800_v2.0.a1
pyrus_communis pycom17g01390
rosa_chinensis RchiOBHm_Chr0c11g0499451 RchiOBHm_Chr1g0314791 RchiOBHm_Chr1g0340221 RchiOBHm_Chr1g0362121 RchiOBHm_Chr1g0362131 RchiOBHm_Chr2g0107491 RchiOBHm_Chr2g0127721 RchiOBHm_Chr2g0143901 RchiOBHm_Chr2g0161531 RchiOBHm_Chr2g0169511 RchiOBHm_Chr2g0171151 RchiOBHm_Chr2g0171221 RchiOBHm_Chr2g0171251 RchiOBHm_Chr2g0171261 RchiOBHm_Chr2g0171341 RchiOBHm_Chr2g0171561 RchiOBHm_Chr2g0171591 RchiOBHm_Chr2g0171601 RchiOBHm_Chr2g0172411 RchiOBHm_Chr2g0172441 RchiOBHm_Chr2g0172771 RchiOBHm_Chr2g0172881 RchiOBHm_Chr2g0173201 RchiOBHm_Chr2g0173211 RchiOBHm_Chr2g0173941 RchiOBHm_Chr2g0173951 RchiOBHm_Chr2g0175281 RchiOBHm_Chr3g0463081 RchiOBHm_Chr3g0482941 RchiOBHm_Chr3g0486241 RchiOBHm_Chr3g0488151 RchiOBHm_Chr3g0488191 RchiOBHm_Chr3g0488271 RchiOBHm_Chr3g0488351 RchiOBHm_Chr3g0488411 RchiOBHm_Chr3g0488491 RchiOBHm_Chr4g0410881 RchiOBHm_Chr4g0440431 RchiOBHm_Chr4g0440501 RchiOBHm_Chr6g0269041 RchiOBHm_Chr7g0194201 RchiOBHm_Chr7g0194301 RchiOBHm_Chr7g0194311 RchiOBHm_Chr7g0194391 RchiOBHm_Chr7g0194401 RchiOBHm_Chr7g0236181
rosa_laevigata RLG00000004203 RLG00000006176 RLG00000022170 RLG00000022198 RLG00000022237 RLG00000022911
rosa_multiflora Rmu_co8086672.1_g000001 Rmu_co8091660.1_g000001 Rmu_co8325445.1_g000001 Rmu_co8482323.1_g000001 Rmu_sc0000239.1_g000034 Rmu_sc0000467.1_g000001 Rmu_sc0000766.1_g000038 Rmu_sc0000789.1_g000004 Rmu_sc0000831.1_g000055 Rmu_sc0000831.1_g000056 Rmu_sc0000831.1_g000057 Rmu_sc0000831.1_g000058 Rmu_sc0000831.1_g000059 Rmu_sc0000831.1_g000060 Rmu_sc0000901.1_g000011 Rmu_sc0000901.1_g000029 Rmu_sc0001513.1_g000006 Rmu_sc0001513.1_g000011 Rmu_sc0001576.1_g000034 Rmu_sc0001685.1_g000062 Rmu_sc0002784.1_g000036 Rmu_sc0003188.1_g000026 Rmu_sc0003188.1_g000027 Rmu_sc0003314.1_g000017 Rmu_sc0003548.1_g000019 Rmu_sc0003624.1_g000018 Rmu_sc0005193.1_g000015 Rmu_sc0006328.1_g000001 Rmu_sc0006328.1_g000005 Rmu_sc0006806.1_g000014 Rmu_sc0006806.1_g000028 Rmu_sc0007320.1_g000005 Rmu_sc0007493.1_g000003 Rmu_sc0007646.1_g000011 Rmu_sc0007648.1_g000001 Rmu_sc0007661.1_g000007 Rmu_sc0007684.1_g000008 Rmu_sc0007799.1_g000007 Rmu_sc0007841.1_g000004 Rmu_sc0008051.1_g000003 Rmu_sc0008124.1_g000008 Rmu_sc0009104.1_g000008 Rmu_sc0009433.1_g000012 Rmu_sc0009883.1_g000011 Rmu_sc0010744.1_g000003 Rmu_sc0011052.1_g000003 Rmu_sc0012403.1_g000008 Rmu_sc0013831.1_g000001 Rmu_sc0016754.1_g000004 Rmu_sc0022238.1_g000002 Rmu_sc0023157.1_g000001 Rmu_sc0023894.1_g000001 Rmu_sc0028130.1_g000001 Rmu_sc0040543.1_g000001 Rmu_ssc0000252.1_g000003 Rmu_ssc0000252.1_g000004 Rmu_ssc0000261.1_g000030 Rmu_ssc0000326.1_g000007
rosa_roxburghii Rroxscaffold_157G00438560 Rroxscaffold_2G00078410 Rroxscaffold_2G00078970 Rroxscaffold_2G00079030 Rroxscaffold_2G00079120 Rroxscaffold_2G00079340 Rroxscaffold_2G00079720 Rroxscaffold_2G00079870 Rroxscaffold_2G00079910 Rroxscaffold_2G00080570 Rroxscaffold_2G00080720 Rroxscaffold_2G00080770 Rroxscaffold_2G00080780 Rroxscaffold_2G00080850 Rroxscaffold_2G00080910 Rroxscaffold_2G00116750 Rroxscaffold_3G00261370 Rroxscaffold_3G00261500 Rroxscaffold_3G00266200 Rroxscaffold_4G00305290 Rroxscaffold_4G00311110 Rroxscaffold_4G00327720 Rroxscaffold_5G00381290 Rroxscaffold_5G00381320 Rroxscaffold_6G00394220 Rroxscaffold_6G00416970
rosa_rugosa Rorug01G0164800.1 Rorug01G0164900 Rorug01G0293800 Rorug01G0293900 Rorug01G0294200 Rorug02G0144400 Rorug02G0271300 Rorug02G0271400 Rorug02G0271400 Rorug02G0271500 Rorug02G0384900 Rorug02G0384900 Rorug02G0385000 Rorug02G0385100 Rorug02G0553000 Rorug02G0553100 Rorug02G0555000 Rorug02G0560000 Rorug02G0560100 Rorug02G0561500 Rorug02G0566500 Rorug02G0568800 Rorug02G0569000 Rorug02G0569400 Rorug02G0569700 Rorug02G0575200 Rorug02G0582300 Rorug03G0061300 Rorug03G0126300 Rorug03G0202400 Rorug03G0224200 Rorug03G0238200 Rorug03G0238300 Rorug03G0238400 Rorug03G0255100 Rorug03G0255100 Rorug04G0326000 Rorug04G0326200 Rorug04G0326300 Rorug06G0124000 Rorug07G0015300 Rorug07G0015700 Rorug07G0015700 Rorug07G0265000
rosa_samantha Rh1AG304100 Rh1AG304500 Rh1AG304600 Rh1CG166600 Rh1CG285500 Rh1DG218600 Rh2AG323600 Rh2AG611800 Rh2AG626100 Rh2AG626400 Rh2AG627700 Rh2AG629700 Rh2AG634400 Rh2AG634500 Rh2AG634800 Rh2AG652800 Rh2BG206800 Rh2BG636300 Rh2BG636400 Rh2BG637300 Rh2BG637400 Rh2BG642600 Rh2BG648000 Rh2BG648300 Rh2BG652700 Rh2BG664000 Rh2CG311300 Rh2CG604800 Rh2CG605400 Rh2CG606300 Rh2CG606800 Rh2CG623800 Rh2CG628700 Rh2DG201600 Rh2DG351100 Rh2DG648000 Rh2DG648100 Rh2DG648900 Rh2DG649000 Rh2DG649100 Rh2DG651000 Rh2DG654900 Rh2DG655100 Rh2DG655200 Rh2DG656700 Rh2DG656900 Rh2DG657100 Rh2DG662700 Rh2DG662900 Rh2DG666300 Rh2DG667000 Rh2DG670700 Rh2DG672100 Rh2DG673400 Rh2DG673600 Rh2DG675200 Rh2DG675300 Rh2DG675600 Rh2DG679000 Rh2DG679100 Rh3AG048000 Rh3AG048100 Rh3AG106800 Rh3AG119500 Rh3AG251300 Rh3AG285800 Rh3AG286700 Rh3AG287300 Rh3AG287400 Rh3CG049400 Rh3CG321600 Rh3DG320300 Rh4AG377300 Rh4AG377700 Rh4AG377900 Rh4DG159200 Rh7AG064400 Rh7AG097600 Rh7AG141500 Rh7AG142100 Rh7AG142200 Rh7AG142300 Rh7AG142600 Rh7AG142800 Rh7AG417800 Rh7AG424000 Rh7CG147100 Rh7DG143000 Rh7DG143900 Rh7DG144400 Rh7DG144700
rosa_wichuraiana Rw0G019520 Rw1G014950 Rw1G027080 Rw2G015390 Rw2G035650 Rw2G046060 Rw2G050780 Rw2G050810 Rw2G051810 Rw2G051850 Rw2G051940 Rw2G051990 Rw2G052000 Rw2G052130 Rw2G052140 Rw2G052530 Rw2G052760 Rw2G052830 Rw2G053180 Rw2G053330 Rw2G053630 Rw3G010110 Rw3G024300 Rw3G025400 Rw3G025450 Rw4G032320 Rw4G032440 Rw6G037400 Rw7G012180 Rw7G012220

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 1 cut(s) 185
AciI CCGC 2 cut(s) 305, 440
AcoI YGGCCR 1 cut(s) 248
AcuI CTGAAG 2 cut(s) 63, 312
AcyI GRCGYC 1 cut(s) 539
AfaI GTAC 4 cut(s) 139, 174, 380, 392
AfiI CCNNNNNNNGG 2 cut(s) 676, 725
AluBI AGCT 6 cut(s) 226, 271, 296, 454, 467, 524
AluI AGCT 6 cut(s) 226, 271, 296, 454, 467, 524
Alw21I GWGCWC 1 cut(s) 151
Alw26I GTCTC 1 cut(s) 493
Ama87I CYCGRG 2 cut(s) 150, 350
AoxI GGCC 1 cut(s) 248
ApeKI GCWGC 2 cut(s) 301, 464
AseI ATTAAT 1 cut(s) 363
AspS9I GGNCC 1 cut(s) 155
AsuHPI GGTGA 1 cut(s) 563
AvaI CYCGRG 2 cut(s) 150, 350
AvaII GGWCC 1 cut(s) 155
BalI TGGCCA 1 cut(s) 250
Bbv12I GWGCWC 1 cut(s) 151
BbvI GCAGC 2 cut(s) 313, 476
BccI CCATC 2 cut(s) 367, 485
BciVI GTATCC 1 cut(s) 296
BclI TGATCA 2 cut(s) 265, 607
BcoDI GTCTC 1 cut(s) 493
BfaI CTAG 1 cut(s) 227
BfmI CTRYAG 2 cut(s) 112, 462
BfuI GTATCC 1 cut(s) 296
BisI GCNGC 3 cut(s) 302, 305, 465
BlpI GCTNAGC 1 cut(s) 297
BlsI GCNGC 3 cut(s) 303, 306, 466
Bme18I GGWCC 1 cut(s) 155
BmeT110I CYCGRG 2 cut(s) 150, 350
BmgT120I GGNCC 1 cut(s) 155
BmiI GGNNCC 1 cut(s) 157
BmsI GCATC 2 cut(s) 427, 568
BpmI CTGGAG 2 cut(s) 603, 698
Bpu1102I GCTNAGC 1 cut(s) 297
BpuEI CTTGAG 1 cut(s) 321
BsaBI GATNNNNATC 1 cut(s) 209
BsaHI GRCGYC 1 cut(s) 539
BsaJI CCNNGG 3 cut(s) 432, 565, 671
Bsc4I CCNNNNNNNGG 2 cut(s) 676, 725
Bse1I ACTGG 2 cut(s) 145, 481
Bse8I GATNNNNATC 1 cut(s) 209
BseDI CCNNGG 3 cut(s) 432, 565, 671
BseGI GGATG 3 cut(s) 442, 473, 477
BseJI GATNNNNATC 1 cut(s) 209
BseLI CCNNNNNNNGG 2 cut(s) 676, 725
BseMII CTCAG 3 cut(s) 12, 228, 311
BseNI ACTGG 2 cut(s) 145, 481
BseXI GCAGC 2 cut(s) 313, 476
BshFI GGCC 1 cut(s) 250
BsiHKAI GWGCWC 1 cut(s) 151
BsiHKCI CYCGRG 2 cut(s) 150, 350
BslFI GGGAC 1 cut(s) 653
BslI CCNNNNNNNGG 2 cut(s) 676, 725
BsmAI GTCTC 1 cut(s) 493
BsmFI GGGAC 1 cut(s) 653
BsnI GGCC 1 cut(s) 250
BsoBI CYCGRG 2 cut(s) 150, 350
Bsp1286I GDGCHC 1 cut(s) 151
Bsp1407I TGTACA 1 cut(s) 390
Bsp143I GATC 3 cut(s) 265, 607, 681
Bsp1720I GCTNAGC 1 cut(s) 297
BspACI CCGC 2 cut(s) 305, 440
BspANI GGCC 1 cut(s) 250
BspCNI CTCAG 3 cut(s) 13, 227, 310
BspLI GGNNCC 1 cut(s) 157
BspMAI CTGCAG 1 cut(s) 466
BsrGI TGTACA 1 cut(s) 390
BsrI ACTGG 2 cut(s) 145, 481
BssECI CCNNGG 3 cut(s) 432, 565, 671
BssMI GATC 3 cut(s) 265, 607, 681
BssNI GRCGYC 1 cut(s) 539
BssT1I CCWWGG 1 cut(s) 432
Bst4CI ACNGT 3 cut(s) 181, 388, 407
BstACI GRCGYC 1 cut(s) 539
BstAUI TGTACA 1 cut(s) 390
BstC8I GCNNGC 3 cut(s) 641, 727, 731
BstDEI CTNAG 4 cut(s) 21, 214, 297, 487
BstDSI CCRYGG 1 cut(s) 671
BstEII GGTNACC 1 cut(s) 569
BstENI CCTNNNNNAGG 1 cut(s) 723
BstF5I GGATG 3 cut(s) 442, 473, 477
BstKTI GATC 3 cut(s) 268, 610, 684
BstMAI GTCTC 1 cut(s) 493
BstMBI GATC 3 cut(s) 265, 607, 681
BstMWI GCNNNNNNNGC 2 cut(s) 561, 636
BstPI GGTNACC 1 cut(s) 569
BstSFI CTRYAG 2 cut(s) 112, 462
BstV1I GCAGC 2 cut(s) 313, 476
BsuI GTATCC 1 cut(s) 296
BsuRI GGCC 1 cut(s) 250
BtgI CCRYGG 1 cut(s) 671
BtsCI GGATG 3 cut(s) 442, 473, 477
BtsIMutI CAGTG 2 cut(s) 18, 488
Cac8I GCNNGC 3 cut(s) 641, 727, 731
Cfr13I GGNCC 1 cut(s) 155
CseI GACGC 1 cut(s) 547
Csp6I GTAC 4 cut(s) 138, 173, 379, 391
CviAII CATG 6 cut(s) 95, 259, 280, 543, 653, 735
CviQI GTAC 4 cut(s) 138, 173, 379, 391
DdeI CTNAG 4 cut(s) 21, 214, 297, 487
DpnI GATC 3 cut(s) 267, 609, 683
DpnII GATC 3 cut(s) 265, 607, 681
EaeI YGGCCR 1 cut(s) 248
Eco130I CCWWGG 1 cut(s) 432
Eco47I GGWCC 1 cut(s) 155
Eco57I CTGAAG 2 cut(s) 63, 312
Eco88I CYCGRG 2 cut(s) 150, 350
Eco91I GGTNACC 1 cut(s) 569
EcoNI CCTNNNNNAGG 1 cut(s) 723
EcoO109I RGGNCCY 1 cut(s) 155
EcoO65I GGTNACC 1 cut(s) 569
EcoT14I CCWWGG 1 cut(s) 432
ErhI CCWWGG 1 cut(s) 432
FaeI CATG 6 cut(s) 98, 262, 283, 546, 656, 738
FalI AAGNNNNNCTT 2 cut(s) 438, 470
FaqI GGGAC 1 cut(s) 653
FatI CATG 6 cut(s) 94, 258, 279, 542, 652, 734
FbaI TGATCA 2 cut(s) 265, 607
Fnu4HI GCNGC 3 cut(s) 302, 305, 465
FokI GGATG 3 cut(s) 449, 460, 464
Fsp4HI GCNGC 3 cut(s) 302, 305, 465
FspBI CTAG 1 cut(s) 227
GluI GCNGC 3 cut(s) 302, 305, 465
GsuI CTGGAG 2 cut(s) 603, 698
HaeIII GGCC 1 cut(s) 250
HgaI GACGC 1 cut(s) 547
Hin1I GRCGYC 1 cut(s) 539
Hin1II CATG 6 cut(s) 98, 262, 283, 546, 656, 738
HindIII AAGCTT 1 cut(s) 452
HinfI GANTC 4 cut(s) 108, 205, 428, 515
HphI GGTGA 1 cut(s) 563
Hpy166II GTNNAC 2 cut(s) 379, 391
Hpy188I TCNGA 2 cut(s) 217, 520
Hpy8I GTNNAC 2 cut(s) 379, 391
HpyAV CCTTC 1 cut(s) 231
HpyCH4III ACNGT 3 cut(s) 181, 388, 407
HpyCH4IV ACGT 2 cut(s) 12, 171
HpyCH4V TGCA 5 cut(s) 125, 464, 656, 663, 725
HpyF10VI GCNNNNNNNGC 2 cut(s) 561, 636
HpyF3I CTNAG 4 cut(s) 21, 214, 297, 487
HpySE526I ACGT 2 cut(s) 12, 171
Hsp92I GRCGYC 1 cut(s) 539
Hsp92II CATG 6 cut(s) 98, 262, 283, 546, 656, 738
Ksp22I TGATCA 2 cut(s) 265, 607
Kzo9I GATC 3 cut(s) 265, 607, 681
Lsp1109I GCAGC 2 cut(s) 313, 476
LweI GCATC 2 cut(s) 427, 568
MaeI CTAG 1 cut(s) 227
MaeII ACGT 2 cut(s) 12, 171
MaeIII GTNAC 5 cut(s) 16, 97, 340, 557, 569
MalI GATC 3 cut(s) 267, 609, 683
MboI GATC 3 cut(s) 265, 607, 681
MboII GAAGA 2 cut(s) 208, 599
MhlI GDGCHC 1 cut(s) 151
MlsI TGGCCA 1 cut(s) 250
MluCI AATT 2 cut(s) 360, 494
MluNI TGGCCA 1 cut(s) 250
MlyI GAGTC 1 cut(s) 524
MmeI TCCRAC 2 cut(s) 33, 498
MnlI CCTC 5 cut(s) 16, 146, 322, 575, 586
Mox20I TGGCCA 1 cut(s) 250
MscI TGGCCA 1 cut(s) 250
MseI TTAA 2 cut(s) 104, 363
MslI CAYNNNNRTG 2 cut(s) 576, 651
Msp20I TGGCCA 1 cut(s) 250
MwoI GCNNNNNNNGC 2 cut(s) 561, 636
NdeII GATC 3 cut(s) 265, 607, 681
NlaIII CATG 6 cut(s) 98, 262, 283, 546, 656, 738
NlaIV GGNNCC 1 cut(s) 157
NmuCI GTSAC 5 cut(s) 16, 97, 340, 557, 569
PaeR7I CTCGAG 1 cut(s) 150
PcsI WCGNNNNNNNCGW 1 cut(s) 177
PfeI GAWTC 3 cut(s) 108, 205, 428
PkrI GCNGC 3 cut(s) 303, 306, 466
PleI GAGTC 1 cut(s) 523
PpsI GAGTC 1 cut(s) 523
PpuMI RGGWCCY 1 cut(s) 155
PshBI ATTAAT 1 cut(s) 363
PsiI TTATAA 1 cut(s) 185
Psp5II RGGWCCY 1 cut(s) 155
PspEI GGTNACC 1 cut(s) 569
PspN4I GGNNCC 1 cut(s) 157
PspPI GGNCC 1 cut(s) 155
PspPPI RGGWCCY 1 cut(s) 155
PspXI VCTCGAGB 1 cut(s) 150
PstI CTGCAG 1 cut(s) 466
RsaI GTAC 4 cut(s) 139, 174, 380, 392
RsaNI GTAC 4 cut(s) 138, 173, 379, 391
RseI CAYNNNNRTG 2 cut(s) 576, 651
SaqAI TTAA 2 cut(s) 104, 363
SatI GCNGC 3 cut(s) 302, 305, 465
Sau3AI GATC 3 cut(s) 265, 607, 681
Sau96I GGNCC 1 cut(s) 155
SchI GAGTC 1 cut(s) 524
SduI GDGCHC 1 cut(s) 151
SfaNI GCATC 2 cut(s) 427, 568
SfcI CTRYAG 2 cut(s) 112, 462
Sfr274I CTCGAG 1 cut(s) 150
SinI GGWCC 1 cut(s) 155
SlaI CTCGAG 1 cut(s) 150
SmiMI CAYNNNNRTG 2 cut(s) 576, 651
SmlI CTYRAG 2 cut(s) 150, 336
SmoI CTYRAG 2 cut(s) 150, 336
Sse9I AATT 2 cut(s) 360, 494
SsiI CCGC 2 cut(s) 305, 440
SspMI CTAG 1 cut(s) 227
StyI CCWWGG 1 cut(s) 432
TaaI ACNGT 3 cut(s) 181, 388, 407
TaiI ACGT 2 cut(s) 15, 174
TaqI TCGA 2 cut(s) 151, 399
TaqII GACCGA 1 cut(s) 557
TasI AATT 2 cut(s) 360, 494
TatI WGTACW 2 cut(s) 137, 390
TauI GCSGC 1 cut(s) 307
TfiI GAWTC 3 cut(s) 108, 205, 428
Tru1I TTAA 2 cut(s) 104, 363
Tru9I TTAA 2 cut(s) 104, 363
TscAI CASTG 2 cut(s) 25, 488
TseFI GTSAC 5 cut(s) 16, 97, 340, 557, 569
TseI GCWGC 2 cut(s) 301, 464
Tsp45I GTSAC 5 cut(s) 16, 97, 340, 557, 569
TspRI CASTG 2 cut(s) 25, 488
VpaK11BI GGWCC 1 cut(s) 155
VspI ATTAAT 1 cut(s) 363
XagI CCTNNNNNAGG 1 cut(s) 723
XhoI CTCGAG 1 cut(s) 150
XspI CTAG 1 cut(s) 227
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.