Basic Information

Type: gene

Biological Identity

Species

arabidopsis_thaliana

Chromosome

Orthogroup ID

OG0000294

Physical Location & Seq

Genomic Coordinates Reverse (-)

2394891 .. 2398291

Gene Structure 3401 bp

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UTR

Exon/CDS

Intron

Transcript / Protein ID

AT3G07520.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 2586 bp

ATGGAGAATTGTATGATTCGCAACACTGGTTATTTTCTAACTATTTTCTTCCTCGCCTTCATTTCATTTGCAGTAACATGCAGCGGAACTAATCAAAAAGATAACGTAGATAGACTTCCAGTAGTGTACGAAGATGTTCGGATAGGTTTGGTGGTGGACATGGGTTCCATGGAAGGCAAGCTTGTGACAACTTCGATTTCGATGGCGCTTTCTGATTTCTATCATGTCAACAATGGCTATAGAACAAGAGTCTCTGTCTTATCCAGAGACTCTCATGGTGACCCTCTCCAAGCTCTCGCTGCAGCCATGGACCTCCTGCAAACTGAACAAGTGGAAGCACTTGTTGGTGGACAATCGTTGCTTGAAGCAAAAAATTTAGCAGAGCTTGGGGAGAAAACTAAAGTTCCAGTGATTTCTTCTTTCCAAGTTCCTAGCTCGTTGAGCTTGGCCAAATATAATTACTTTATTCAAGCTACTCATGATACATCCTCTGAAGCAAAGGGAATTGCAGCTCTGTTCAGCAATTTTGATTGGAGAACCGCTGTTCTTATCTACGAGGATGATGATGACTGGAGAGAGAGTATACAACCTTTGGTTGGACATTTCCAACAGAACGCCATTCACATTGAGTACAAGGCGGAATTTTCTGTCTCATCTAATGAGGAATGTATCATGAAGCAGCTAAGAAAGTTTAAGGCCTCGGGGATAAGGATTTTTGTTGCGCACATTTCTGAACGAATTGCAAATCGTCTCTTTCCATGTGCTCGGAGGTTAGGAATGATGGAGGAAGGATATGCTTGGATCCTCACAGCGAGAAGCATGAATAATTTTCAAGACACAAATTATTTAGCAAAAGAGGAAATGGAAGGTGTGATTGGTTTCAAGTCTTATATTCCGTTGACTGAGGAGCTTCACAACTTTACTTTGAGATGGAAGAGATCTTTGCGACTCGAAGAAGTAGTTACAAGGATGAGCGTTTGTAGCATATGGGCTCACGATATAGCTTGGAGTCTTGCAAGAGCAGCAGAAGTTGCAAAGTTACCAGGTTTGTCAGTATATGACCTGCTTGAGGCTATTCCAGAGAGTGCTAAGCATAAAGGTTTGAGTGGTGACATCAAATTCATCGATAAGAAGTTTATCTCAGACAAGTTTGAGATTGTGAATATGATAGGGAGAGGTGAGAGAAGTGTAGGACTTTGGAATTCTGGTAGTTTCATCAGCAATAGAAGAAGACGTTTGTCTTCTACCAAAGCACTTGAGACAATCATCTGGCCTGGAGGGTCTACAAGAATTCCGAAAATCCGTTCGTTGAAAGAGAAGAGGCATGGTAAAAAGAAGAAGCTGAGAGTTTTAGTACCAGCAGGAAACATAACTCCGCAAATACTGGAAGTGAAAACAGATTTTAAAACTGGAGTCACAGCTGCTACAGGATACTGTATTGACGTTTTTGAGACATCAATCCTACCTTTCAATTATGAAGTGGAGTACATACCTTGGCCTGGTGCAATTAACTACAAGAACTACAACGATCTTGTGTACACACTGTATAGCCAGAAAGACAAGTACGATGCAGCTGTTGGGGATATCACGATTACTGATAACAGATCTTTATATGTAGATTTTACATTACCTTTCACTGATATGGGACTCGCAGTTGTTACTGCCAAAGACAAAAGCATGTGGATTATCTTTAAGCCTTTGACACTTAGTCTTTGGCTAACAATTGCAAGTTTCTTTATCTTGACGGGGGCTATAGTTTGGTTGATAGAGCGGCATGATAACGCTGACTTCCAAGGCTCTTGTTTCCAACAGATTGGAACATTGCTATGTTTTGGGTTCTCGACCCTTGTCTTTGCCCATCGGGAGAGGCTGCAACATAATATGTCAAGATTTGTAGTTATTGTTTGGATATTTGCAGTGCTTATATTGACTTCAAATTACACTGCAACGTTGACATCAGTGATGACGGTTCAACAGATACGCGGGTTGAAATCAAACGAAAACATTGGCTTCTTTTCTGCCTCTATTGCAGCAAATGTGGTTAATGATAATCCTACGTTCCAAGGACCGAGATACAAGGGATTAAAGACAGCTGACGATTTTACAAATGCTTTAAGGAATGGAACTATCTCGTTTATCGTCGATGAAGTTCCATATGTAAAGCTCTTTGTTGCAAAGCACCCTTCAGAATTCGTCATTGTCGAAACCGAAAGCGTAACCAACGGCTTTGGATTTGCTTTCCAGAAAGGTTCTCCTTTGGTTCAAAAGGTGTCAAGAGAAATCGAAAAGCTAAGGAGAACAGAGAAGCTAAAAGCCATAGAGAATTGGTGGTTCCAGAGACAAACGACGTCAGCCACAAGCGAGGATACGTTCCATCCTCTCACTGTATACACATTTCGCGGTTTGTTTATGATCACAGGAGTTTCTTTTGCGTTTGCTCTCATCGTCTATCTAATCCCCTGGAACCGAGAACAAAGGCAAGTTGTGCTTAAACATTTCCACCGTTATGTTAGTCATCGATTTGCAAGAGAAATTCGTCCTTCTCCCACCACACCAAACAGGCAAAATGAGAATTCAGTCATCTGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0001101 GO:0003674 GO:0004888 GO:0005215 GO:0005216 GO:0005261 GO:0005262 GO:0005267 GO:0005272 GO:0005575 GO:0005623 GO:0005886 GO:0006810 GO:0006811 GO:0006812 GO:0006813 GO:0006814 GO:0006816 GO:0006873 GO:0007154 GO:0007165 GO:0008066 GO:0008150 GO:0008324 GO:0009719 GO:0009725 GO:0009737 GO:0009987 GO:0010033 GO:0010243 GO:0015075 GO:0015077 GO:0015079 GO:0015081 GO:0015085 GO:0015267 GO:0015318 GO:0015672 GO:0016020 GO:0019722 GO:0019725 GO:0019932 GO:0022803 GO:0022838 GO:0022857 GO:0022890 GO:0023052 GO:0030001 GO:0030003 GO:0033993 GO:0034220 GO:0035556 GO:0035725 GO:0038023 GO:0042221 GO:0042592 GO:0043200 GO:0044464 GO:0046873 GO:0048878 GO:0050789 GO:0050794 GO:0050801 GO:0050896 GO:0051179 GO:0051234 GO:0051716 GO:0055080 GO:0055082 GO:0055085 GO:0060089 GO:0065007 GO:0065008 GO:0070588 GO:0070838 GO:0070887 GO:0071229 GO:0071230 GO:0071310 GO:0071417 GO:0071495 GO:0071804 GO:0071805 GO:0071944 GO:0072511 GO:0097305 GO:0098655 GO:0098660 GO:0098662 GO:1901698 GO:1901699 GO:1901700 GO:1901701

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

ANF_receptor Lig_chan Lig_chan-Glu_bd SBP_bac_3

Protein Analysis

861

Amino Acids

97.76

Weight (kDa)

8.9

Isoelectric Point (pI)

34.63

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
Peripla_BP_6	PF13458	46 - 376	1.8e-15	Periplasmic binding protein
ANF_receptor	PF01094	63 - 391	1.5e-61	Receptor family ligand binding region
Lig_chan-Glu_bd	PF10613	468 - 557	5.8e-10	Ligated ion channel L-glutamate- and glycine-binding site
SBP_bac_3	PF00497	518 - 779	4.7e-10	Bacterial extracellular solute-binding proteins, family 3
Lig_chan	PF00060	569 - 809	1.7e-28	Ligand-gated ion channel

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

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Orthologous Genes (Group: OG0000294)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT3G07520 AT5G48400 AT5G48400 AT5G48410 AT5G48410 AT5G48410 AT5G48410
fragaria_vesca	FvH4_1g26430 FvH4_7g07770 FvH4_7g07820 FvH4_7g07830 FvH4_7g07830
malus_domestica	MD02G1232900.v1.1 MD02G1233100.v1.1 MD07G1080800.v1.1
prunus_persica	Prupe.2G105100_v2.0.a1 Prupe.2G105200_v2.0.a1 Prupe.2G105300_v2.0.a1 Prupe.2G105400_v2.0.a1 Prupe.2G105500_v2.0.a1 Prupe.2G105600_v2.0.a1 Prupe.2G105700_v2.0.a1 Prupe.2G105700_v2.0.a1 Prupe.2G105700_v2.0.a1 Prupe.2G105800_v2.0.a1
pyrus_communis	pycom02g20100 pycom07g06420
rosa_chinensis	RchiOBHm_Chr1g0341721 RchiOBHm_Chr1g0341731 RchiOBHm_Chr1g0341751 RchiOBHm_Chr1g0341761 RchiOBHm_Chr1g0341831 RchiOBHm_Chr1g0341851 RchiOBHm_Chr1g0341911 RchiOBHm_Chr1g0342001 RchiOBHm_Chr1g0342301 RchiOBHm_Chr5g0063031 RchiOBHm_Chr5g0063061
rosa_laevigata	RLG00000029107 RLG00000029109 RLG00000029110 RLG00000029111 RLG00000029123 RLG00000029125 RLG00000029131 RLG00000029136 RLG00000029150 RLG00000029650 RLG00000029651 RLG00000035598
rosa_multiflora	Rmu_sc0000696.1_g000008 Rmu_sc0001055.1_g000009 Rmu_sc0001055.1_g000014 Rmu_sc0001547.1_g000003 Rmu_sc0002161.1_g000003 Rmu_sc0002302.1_g000023 Rmu_sc0002322.1_g000082 Rmu_sc0004658.1_g000002 Rmu_sc0005331.1_g000003 Rmu_sc0007655.1_g000001 Rmu_sc0007655.1_g000003 Rmu_sc0018911.1_g000004 Rmu_sc0018911.1_g000011 Rmu_sc0034500.1_g000001
rosa_roxburghii	Rroxscaffold_4G00312490 Rroxscaffold_4G00312540 Rroxscaffold_4G00312660 Rroxscaffold_4G00312720 Rroxscaffold_4G00312820 Rroxscaffold_4G00312930
rosa_rugosa	Rorug01G0151800.1 Rorug01G0151900.1 Rorug01G0152000.1 Rorug01G0154000.1 Rorug01G0154100.1 Rorug05G0353600 Rorug05G0353700 Rorug05G0353800
rosa_samantha	Rh1AG166600 Rh1AG168100 Rh1AG169100 Rh1AG169200 Rh1AG169600 Rh1AG169800 Rh1BG132800 Rh1BG132900 Rh1BG133600 Rh1BG133700 Rh1BG134800 Rh1BG135300 Rh1BG135500 Rh1BG135900 Rh1BG136000 Rh1BG136100 Rh1BG136400 Rh1BG137300 Rh1BG137600 Rh1BG137800 Rh1CG155000 Rh1CG155600 Rh1CG156900 Rh1CG157500 Rh1CG157800 Rh1CG158100 Rh1DG167700 Rh1DG168200 Rh1DG168900 Rh1DG169000 Rh1DG169500 Rh5AG414400 Rh5BG429200 Rh5CG452600 Rh5DG379600 Rh5DG442600 Rh5DG442700
rosa_wichuraiana	Rw0G014260 Rw0G017550 Rw1G013900 Rw1G014090 Rw1G014110 Rw1G014130 Rw1G014150 Rw5G038950

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AatII	GACGTC	1 cut(s)	2351
Acc16I	TGCGCA	1 cut(s)	723
Acc36I	ACCTGC	1 cut(s)	1071
AccBSI	CCGCTC	1 cut(s)	1771
AccI	GTMKAC	3 cut(s)	583, 1283, 2388
AccII	CGCG	2 cut(s)	1983, 2400
AciI	CCGC	7 cut(s)	84, 540, 638, 1376, 1771, 1983, 2400
AclI	AACGTT	1 cut(s)	1949
AclWI	GGATC	2 cut(s)	796, 809
AcoI	YGGCCR	1 cut(s)	447
AcsI	RAATTY	8 cut(s)	373, 641, 1118, 1201, 1290, 2189, 2532, 2572
AcuI	CTGAAG	2 cut(s)	513, 2169
AcyI	GRCGYC	1 cut(s)	2348
AfaI	GTAC	6 cut(s)	128, 632, 1356, 1487, 1538, 1565
AfiI	CCNNNNNNNGG	3 cut(s)	596, 1069, 1499
AhdI	GACNNNNNGTC	1 cut(s)	1707
AjnI	CCWGG	4 cut(s)	1042, 1273, 1498, 2459
AjuI	GAANNNNNNNTTGG	4 cut(s)	327, 359, 858, 890
Alw21I	GWGCWC	1 cut(s)	766
Alw26I	GTCTC	7 cut(s)	256, 261, 655, 755, 1253, 1445, 2332
AlwI	GGATC	2 cut(s)	796, 809
Ama87I	CYCGRG	1 cut(s)	700
AoxI	GGCC	4 cut(s)	447, 696, 1271, 1496
ApoI	RAATTY	8 cut(s)	373, 641, 1118, 1201, 1290, 2189, 2532, 2572
Asp700I	GAANNNNTTC	1 cut(s)	135
AspLEI	GCGC	2 cut(s)	208, 724
AspS9I	GGNCC	2 cut(s)	310, 2066
AsuHPI	GGTGA	3 cut(s)	290, 1121, 1190
AvaI	CYCGRG	1 cut(s)	700
AvaII	GGWCC	2 cut(s)	310, 2066
BaeI	ACNNNNGTAYC	2 cut(s)	1970, 2003
BalI	TGGCCA	1 cut(s)	449
BamHI	GGATCC	1 cut(s)	801
BanII	GRGCYC	1 cut(s)	994
BarI	GAAGNNNNNNTAC	2 cut(s)	99, 131
BbsI	GAAGAC	2 cut(s)	1233, 1237
Bbv12I	GWGCWC	1 cut(s)	766
BccI	CCATC	5 cut(s)	196, 775, 924, 1866, 2382
BceAI	ACGGC	1 cut(s)	2239
BciT130I	CCWGG	4 cut(s)	1044, 1275, 1500, 2461
BciVI	GTATCC	2 cut(s)	1424, 2359
BclI	TGATCA	1 cut(s)	2412
BcoDI	GTCTC	7 cut(s)	256, 261, 655, 755, 1253, 1445, 2332
BfaI	CTAG	1 cut(s)	432
BfmI	CTRYAG	4 cut(s)	238, 300, 1425, 1752
BfoI	RGCGCY	1 cut(s)	209
BfuAI	ACCTGC	1 cut(s)	1071
BfuI	GTATCC	2 cut(s)	1424, 2359
BglII	AGATCT	2 cut(s)	938, 1604
BlpI	GCTNAGC	1 cut(s)	1089
Bme1390I	CCNGG	4 cut(s)	1044, 1275, 1500, 2461
Bme18I	GGWCC	2 cut(s)	310, 2066
BmeRI	GACNNNNNGTC	1 cut(s)	1707
BmeT110I	CYCGRG	1 cut(s)	700
BmgT120I	GGNCC	2 cut(s)	310, 2066
BmiI	GGNNCC	4 cut(s)	166, 803, 2333, 2465
BmrFI	CCNGG	4 cut(s)	1044, 1275, 1500, 2461
BmsI	GCATC	1 cut(s)	1558
BoxI	GACNNNNGTC	2 cut(s)	1237, 1847
BpiI	GAAGAC	2 cut(s)	1233, 1237
BpmI	CTGGAG	3 cut(s)	592, 1296, 1431
Bpu10I	CCTNAGC	1 cut(s)	2291
Bpu1102I	GCTNAGC	1 cut(s)	1089
BpuEI	CTTGAG	2 cut(s)	1088, 1277
Bsa29I	ATCGAT	2 cut(s)	1125, 2518
BsaBI	GATNNNNATC	1 cut(s)	219
BsaHI	GRCGYC	1 cut(s)	2348
BsaJI	CCNNGG	7 cut(s)	168, 306, 699, 1493, 1792, 2062, 2459
BsaXI	ACNNNNNCTCC	2 cut(s)	565, 595
Bsc4I	CCNNNNNNNGG	3 cut(s)	596, 1069, 1499
Bse1I	ACTGG	6 cut(s)	31, 119, 407, 575, 1389, 1414
Bse3DI	GCAATG	1 cut(s)	1820
Bse8I	GATNNNNATC	1 cut(s)	219
BseBI	CCWGG	4 cut(s)	1044, 1275, 1500, 2461
BseCI	ATCGAT	2 cut(s)	1125, 2518
BseDI	CCNNGG	7 cut(s)	168, 306, 699, 1493, 1792, 2062, 2459
BseGI	GGATG	4 cut(s)	485, 565, 975, 2374
BseJI	GATNNNNATC	1 cut(s)	219
BseLI	CCNNNNNNNGG	3 cut(s)	596, 1069, 1499
BseMI	GCAATG	1 cut(s)	1820
BseMII	CTCAG	3 cut(s)	894, 1155, 1334
BseNI	ACTGG	6 cut(s)	31, 119, 407, 575, 1389, 1414
BseRI	GAGGAG	1 cut(s)	920
Bsh1236I	CGCG	2 cut(s)	1983, 2400
BshFI	GGCC	4 cut(s)	449, 698, 1273, 1498
BshVI	ATCGAT	2 cut(s)	1125, 2518
BsiHKAI	GWGCWC	1 cut(s)	766
BsiHKCI	CYCGRG	1 cut(s)	700
BslFI	GGGAC	1 cut(s)	1659
BslI	CCNNNNNNNGG	3 cut(s)	596, 1069, 1499
BsmAI	GTCTC	7 cut(s)	256, 261, 655, 755, 1253, 1445, 2332
BsmBI	CGTCTC	1 cut(s)	755
BsmFI	GGGAC	1 cut(s)	1659
BsnI	GGCC	4 cut(s)	449, 698, 1273, 1498
BsoBI	CYCGRG	1 cut(s)	700
Bsp1286I	GDGCHC	2 cut(s)	766, 994
Bsp1407I	TGTACA	1 cut(s)	1536
Bsp143I	GATC	5 cut(s)	801, 938, 1528, 1604, 2412
Bsp1720I	GCTNAGC	1 cut(s)	1089
Bsp19I	CCATGG	2 cut(s)	168, 306
BspACI	CCGC	7 cut(s)	84, 540, 638, 1376, 1771, 1983, 2400
BspANI	GGCC	4 cut(s)	449, 698, 1273, 1498
BspCNI	CTCAG	3 cut(s)	895, 1154, 1335
BspDI	ATCGAT	2 cut(s)	1125, 2518
BspFNI	CGCG	2 cut(s)	1983, 2400
BspHI	TCATGA	2 cut(s)	478, 672
BspLI	GGNNCC	4 cut(s)	166, 803, 2333, 2465
BspMAI	CTGCAG	1 cut(s)	304
BspMI	ACCTGC	1 cut(s)	1071
BspPI	GGATC	2 cut(s)	796, 809
BsrBI	CCGCTC	1 cut(s)	1771
BsrDI	GCAATG	1 cut(s)	1820
BsrGI	TGTACA	1 cut(s)	1536
BsrI	ACTGG	6 cut(s)	31, 119, 407, 575, 1389, 1414
BssECI	CCNNGG	7 cut(s)	168, 306, 699, 1493, 1792, 2062, 2459
BssMI	GATC	5 cut(s)	801, 938, 1528, 1604, 2412
BssNAI	GTATAC	2 cut(s)	584, 2389
BssNI	GRCGYC	1 cut(s)	2348
BssT1I	CCWWGG	5 cut(s)	168, 306, 1493, 1792, 2062
Bst1107I	GTATAC	2 cut(s)	584, 2389
Bst2UI	CCWGG	4 cut(s)	1044, 1275, 1500, 2461
Bst4CI	ACNGT	5 cut(s)	1436, 1545, 1969, 2386, 2504
Bst6I	CTCTTC	2 cut(s)	929, 1313
BstACI	GRCGYC	1 cut(s)	2348
BstAPI	GCANNNNNTGC	2 cut(s)	1031, 2485
BstAUI	TGTACA	1 cut(s)	1536
BstC8I	GCNNGC	1 cut(s)	179
BstDEI	CTNAG	7 cut(s)	683, 903, 1089, 1141, 1343, 1706, 2291
BstDSI	CCRYGG	2 cut(s)	168, 306
BstEII	GGTNACC	1 cut(s)	278
BstENI	CCTNNNNNAGG	1 cut(s)	1067
BstF5I	GGATG	4 cut(s)	485, 565, 975, 2374
BstFNI	CGCG	2 cut(s)	1983, 2400
BstH2I	RGCGCY	1 cut(s)	209
BstHHI	GCGC	2 cut(s)	208, 724
BstKTI	GATC	5 cut(s)	804, 941, 1531, 1607, 2415
BstMAI	GTCTC	7 cut(s)	256, 261, 655, 755, 1253, 1445, 2332
BstMBI	GATC	5 cut(s)	801, 938, 1528, 1604, 2412
BstMWI	GCNNNNNNNGC	7 cut(s)	299, 441, 981, 1022, 1031, 2027, 2485
BstNI	CCWGG	4 cut(s)	1044, 1275, 1500, 2461
BstNSI	RCATGY	2 cut(s)	81, 1681
BstPAI	GACNNNNGTC	2 cut(s)	1237, 1847
BstPI	GGTNACC	1 cut(s)	278
BstSCI	CCNGG	4 cut(s)	1042, 1273, 1498, 2459
BstSFI	CTRYAG	4 cut(s)	238, 300, 1425, 1752
BstUI	CGCG	2 cut(s)	1983, 2400
BstV2I	GAAGAC	2 cut(s)	1233, 1237
BstX2I	RGATCY	3 cut(s)	801, 938, 1604
BstXI	CCANNNNNNTGG	1 cut(s)	1814
BstYI	RGATCY	3 cut(s)	801, 938, 1604
BstZ17I	GTATAC	2 cut(s)	584, 2389
Bsu15I	ATCGAT	2 cut(s)	1125, 2518
BsuI	GTATCC	2 cut(s)	1424, 2359
BsuRI	GGCC	4 cut(s)	449, 698, 1273, 1498
BsuTUI	ATCGAT	2 cut(s)	1125, 2518
BtgI	CCRYGG	2 cut(s)	168, 306
BtsCI	GGATG	4 cut(s)	485, 565, 975, 2374
BtsI	GCAGTG	2 cut(s)	1923, 1941
BtsIMutI	CAGTG	8 cut(s)	24, 414, 1541, 1635, 1923, 1941, 1965, 2382
BveI	ACCTGC	1 cut(s)	1071
Cac8I	GCNNGC	1 cut(s)	179
CciI	TCATGA	2 cut(s)	478, 672
CfoI	GCGC	2 cut(s)	208, 724
Cfr13I	GGNCC	2 cut(s)	310, 2066
ClaI	ATCGAT	2 cut(s)	1125, 2518
CsiI	ACCWGGT	1 cut(s)	1042
Csp6I	GTAC	6 cut(s)	127, 631, 1355, 1486, 1537, 1564
CviQI	GTAC	6 cut(s)	127, 631, 1355, 1486, 1537, 1564
DdeI	CTNAG	7 cut(s)	683, 903, 1089, 1141, 1343, 1706, 2291
DpnI	GATC	5 cut(s)	803, 940, 1530, 1606, 2414
DpnII	GATC	5 cut(s)	801, 938, 1528, 1604, 2412
DraI	TTTAAA	1 cut(s)	1405
DriI	GACNNNNNGTC	1 cut(s)	1707
EaeI	YGGCCR	1 cut(s)	447
Eam1104I	CTCTTC	2 cut(s)	929, 1313
Eam1105I	GACNNNNNGTC	1 cut(s)	1707
EarI	CTCTTC	2 cut(s)	929, 1313
EciI	GGCGGA	1 cut(s)	653
Eco130I	CCWWGG	5 cut(s)	168, 306, 1493, 1792, 2062
Eco147I	AGGCCT	1 cut(s)	698
Eco24I	GRGCYC	1 cut(s)	994
Eco32I	GATATC	1 cut(s)	1585
Eco47I	GGWCC	2 cut(s)	310, 2066
Eco57I	CTGAAG	2 cut(s)	513, 2169
Eco88I	CYCGRG	1 cut(s)	700
Eco91I	GGTNACC	1 cut(s)	278
EcoNI	CCTNNNNNAGG	1 cut(s)	1067
EcoO65I	GGTNACC	1 cut(s)	278
EcoRI	GAATTC	4 cut(s)	1201, 1290, 2189, 2572
EcoRII	CCWGG	4 cut(s)	1042, 1273, 1498, 2459
EcoRV	GATATC	1 cut(s)	1585
EcoT14I	CCWWGG	5 cut(s)	168, 306, 1493, 1792, 2062
EcoT38I	GRGCYC	1 cut(s)	994
ErhI	CCWWGG	5 cut(s)	168, 306, 1493, 1792, 2062
Esp3I	CGTCTC	1 cut(s)	755
FalI	AAGNNNNNCTT	4 cut(s)	165, 197, 2472, 2504
FaqI	GGGAC	1 cut(s)	1659
FauI	CCCGC	1 cut(s)	1976
FauNDI	CATATG	2 cut(s)	986, 2155
FbaI	TGATCA	1 cut(s)	2412
FblI	GTMKAC	3 cut(s)	583, 1283, 2388
FokI	GGATG	4 cut(s)	472, 572, 982, 2361
FriOI	GRGCYC	1 cut(s)	994
FspBI	CTAG	1 cut(s)	432
FspI	TGCGCA	1 cut(s)	723
GlaI	GCGC	2 cut(s)	207, 723
GsuI	CTGGAG	3 cut(s)	592, 1296, 1431
HaeII	RGCGCY	1 cut(s)	209
HaeIII	GGCC	4 cut(s)	449, 698, 1273, 1498
HhaI	GCGC	2 cut(s)	208, 724
Hin1I	GRCGYC	1 cut(s)	2348
Hin6I	GCGC	2 cut(s)	206, 722
HinP1I	GCGC	2 cut(s)	206, 722
HincII	GTYRAC	3 cut(s)	229, 900, 1953
HindII	GTYRAC	3 cut(s)	229, 900, 1953
HindIII	AAGCTT	1 cut(s)	179
HinfI	GANTC	7 cut(s)	16, 249, 269, 948, 1009, 1413, 1647
HphI	GGTGA	3 cut(s)	290, 1121, 1190
Hpy188I	TCNGA	9 cut(s)	141, 214, 493, 733, 768, 1144, 1296, 2188, 2585
Hpy99I	CGWCG	2 cut(s)	2144, 2350
HpyAV	CCTTC	6 cut(s)	67, 167, 782, 860, 2193, 2550
HpyCH4III	ACNGT	5 cut(s)	1436, 1545, 1969, 2386, 2504
HpyCH4IV	ACGT	7 cut(s)	105, 1234, 1443, 1949, 2057, 2348, 2369
HpyF10VI	GCNNNNNNNGC	7 cut(s)	299, 441, 981, 1022, 1031, 2027, 2485
HpyF3I	CTNAG	7 cut(s)	683, 903, 1089, 1141, 1343, 1706, 2291
HpySE526I	ACGT	7 cut(s)	105, 1234, 1443, 1949, 2057, 2348, 2369
Hsp92I	GRCGYC	1 cut(s)	2348
HspAI	GCGC	2 cut(s)	206, 722
Ksp22I	TGATCA	1 cut(s)	2412
Kzo9I	GATC	5 cut(s)	801, 938, 1528, 1604, 2412
LmnI	GCTCC	1 cut(s)	907
LweI	GCATC	1 cut(s)	1558
MabI	ACCWGGT	1 cut(s)	1042
MaeI	CTAG	1 cut(s)	432
MaeII	ACGT	7 cut(s)	105, 1234, 1443, 1949, 2057, 2348, 2369
MaeIII	GTNAC	9 cut(s)	73, 184, 278, 961, 1038, 1109, 1414, 1657, 2215
MalI	GATC	5 cut(s)	803, 940, 1530, 1606, 2414
MbiI	CCGCTC	1 cut(s)	1771
MboI	GATC	5 cut(s)	801, 938, 1528, 1604, 2412
MfeI	CAATTG	1 cut(s)	1722
MflI	RGATCY	3 cut(s)	801, 938, 1604
MhlI	GDGCHC	2 cut(s)	766, 994
MlsI	TGGCCA	1 cut(s)	449
MluNI	TGGCCA	1 cut(s)	449
MlyI	GAGTC	6 cut(s)	258, 263, 942, 1018, 1422, 1641
MmeI	TCCRAC	3 cut(s)	577, 631, 1831
Mox20I	TGGCCA	1 cut(s)	449
MroXI	GAANNNNTTC	1 cut(s)	135
MscI	TGGCCA	1 cut(s)	449
MseI	TTAA	8 cut(s)	693, 1404, 1509, 1692, 2043, 2084, 2114, 2490
MslI	CAYNNNNRTG	3 cut(s)	1640, 1825, 2505
Msp20I	TGGCCA	1 cut(s)	449
MspA1I	CMGCKG	5 cut(s)	84, 542, 1421, 1574, 2093
MspR9I	CCNGG	4 cut(s)	1044, 1275, 1500, 2461
MunI	CAATTG	1 cut(s)	1722
MvaI	CCWGG	4 cut(s)	1044, 1275, 1500, 2461
MvnI	CGCG	2 cut(s)	1983, 2400
MwoI	GCNNNNNNNGC	7 cut(s)	299, 441, 981, 1022, 1031, 2027, 2485
NcoI	CCATGG	2 cut(s)	168, 306
NdeI	CATATG	2 cut(s)	986, 2155
NdeII	GATC	5 cut(s)	801, 938, 1528, 1604, 2412
NlaIV	GGNNCC	4 cut(s)	166, 803, 2333, 2465
NmuCI	GTSAC	4 cut(s)	184, 278, 1109, 1414
NsbI	TGCGCA	1 cut(s)	723
NspI	RCATGY	2 cut(s)	81, 1681
PagI	TCATGA	2 cut(s)	478, 672
PceI	AGGCCT	1 cut(s)	698
PcsI	WCGNNNNNNNCGW	1 cut(s)	2199
PdmI	GAANNNNTTC	1 cut(s)	135
PfeI	GAWTC	1 cut(s)	16
PleI	GAGTC	6 cut(s)	257, 263, 942, 1017, 1421, 1641
PpsI	GAGTC	6 cut(s)	257, 263, 942, 1017, 1421, 1641
PshAI	GACNNNNGTC	2 cut(s)	1237, 1847
Psp1406I	AACGTT	1 cut(s)	1949
Psp6I	CCWGG	4 cut(s)	1042, 1273, 1498, 2459
PspEI	GGTNACC	1 cut(s)	278
PspGI	CCWGG	4 cut(s)	1042, 1273, 1498, 2459
PspN4I	GGNNCC	4 cut(s)	166, 803, 2333, 2465
PspPI	GGNCC	2 cut(s)	310, 2066
PstI	CTGCAG	1 cut(s)	304
PsuI	RGATCY	3 cut(s)	801, 938, 1604
PvuII	CAGCTG	3 cut(s)	1421, 1574, 2093
RsaI	GTAC	6 cut(s)	128, 632, 1356, 1487, 1538, 1565
RsaNI	GTAC	6 cut(s)	127, 631, 1355, 1486, 1537, 1564
RseI	CAYNNNNRTG	3 cut(s)	1640, 1825, 2505
SaqAI	TTAA	8 cut(s)	693, 1404, 1509, 1692, 2043, 2084, 2114, 2490
Sau3AI	GATC	5 cut(s)	801, 938, 1528, 1604, 2412
Sau96I	GGNCC	2 cut(s)	310, 2066
SchI	GAGTC	6 cut(s)	258, 263, 942, 1018, 1422, 1641
ScrFI	CCNGG	4 cut(s)	1044, 1275, 1500, 2461
SduI	GDGCHC	2 cut(s)	766, 994
SexAI	ACCWGGT	1 cut(s)	1042
SfaNI	GCATC	1 cut(s)	1558
SfcI	CTRYAG	4 cut(s)	238, 300, 1425, 1752
SinI	GGWCC	2 cut(s)	310, 2066
SmiMI	CAYNNNNRTG	3 cut(s)	1640, 1825, 2505
SmlI	CTYRAG	2 cut(s)	1067, 1256
SmoI	CTYRAG	2 cut(s)	1067, 1256
SseBI	AGGCCT	1 cut(s)	698
SsiI	CCGC	7 cut(s)	84, 540, 638, 1376, 1771, 1983, 2400
SspMI	CTAG	1 cut(s)	432
StuI	AGGCCT	1 cut(s)	698
StyD4I	CCNGG	4 cut(s)	1042, 1273, 1498, 2459
StyI	CCWWGG	5 cut(s)	168, 306, 1493, 1792, 2062
TaaI	ACNGT	5 cut(s)	1436, 1545, 1969, 2386, 2504
TaiI	ACGT	7 cut(s)	108, 1237, 1446, 1952, 2060, 2351, 2372
TaqI	TCGA	9 cut(s)	194, 200, 951, 1125, 1841, 2142, 2202, 2283, 2518
TaqII	GACCGA	1 cut(s)	2083
TatI	WGTACW	3 cut(s)	630, 1485, 1536
TauI	GCSGC	1 cut(s)	1774
TfiI	GAWTC	1 cut(s)	16
Tru1I	TTAA	8 cut(s)	693, 1404, 1509, 1692, 2043, 2084, 2114, 2490
Tru9I	TTAA	8 cut(s)	693, 1404, 1509, 1692, 2043, 2084, 2114, 2490
TscAI	CASTG	8 cut(s)	31, 414, 1548, 1642, 1923, 1948, 1965, 2389
TseFI	GTSAC	4 cut(s)	184, 278, 1109, 1414
Tsp45I	GTSAC	4 cut(s)	184, 278, 1109, 1414
TspDTI	ATGAA	8 cut(s)	49, 54, 689, 836, 1111, 1204, 1491, 2160
TspGWI	ACGGA	2 cut(s)	885, 1292
TspRI	CASTG	8 cut(s)	31, 414, 1548, 1642, 1923, 1948, 1965, 2389
VpaK11BI	GGWCC	2 cut(s)	310, 2066
XagI	CCTNNNNNAGG	1 cut(s)	1067
XapI	RAATTY	8 cut(s)	373, 641, 1118, 1201, 1290, 2189, 2532, 2572
XceI	RCATGY	2 cut(s)	81, 1681
XmiI	GTMKAC	3 cut(s)	583, 1283, 2388
XmnI	GAANNNNTTC	1 cut(s)	135
XspI	CTAG	1 cut(s)	432
ZraI	GACGTC	1 cut(s)	2349

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.