Basic Information

Type: gene

Biological Identity

Species

arabidopsis_thaliana

Chromosome

Orthogroup ID

OG0000294

Physical Location & Seq

Genomic Coordinates Forward (+)

19616066 .. 19619508

Gene Structure 3443 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

AT5G48400.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 2253 bp

ATGGTGAGAATTTGTATTCAAACCCCAATTTTGCTATCGTTTCTTCTTGTTCTGCTTTTCTTCATCTCCAACTGTTTTGCTTCGAGTCAAAACAACGATGATGATAAACGGATTCGGGTCCGGGTCGGGTTGGTTTTGGATTTGGGTTCCGTGGAAGGGAAGATAGTGCGGAGTTCTGTTTCCATGGCTCTTTCTGATTTCTACGACAATCACAATGACTACAAAACAAGACTCTCTCTTTTAGTCAGAGATTCTCATGGAGAGCCTCTTCTTGCTCTTGATTCAGTTGTAGATTTGCTGCAAACAGAAGGAGTGCAAGCAATAATTGGCGGGAACTCGTTGCTAGAAGCGAAGCTTTTGGCGGAACTTGGAGAGAAAGCTAGGGTTCCTGTGATTTCACTTAACTCTCCCATGTCATTGTCATTGAGCAAATACACTCACTTGATCCAAGCCACACATAACTCTGCCTCTGAGGTTAAAGGAATTACAGCTTTCCTCCATGGGTTTGATTGGAACAGTGTTGCTCTTGTTTTAGAAGATCACGATGACTGGAGAGAGAGTATGCATTTTATGGTGGACCATTTCCATGAGAACAACGTTCATGTACAGTCCAAGGTTGCTTTTAGTGTCACTTCGAGTGAGGATTCTTTGATGGATCGATTACGGGAGCTTAAGGACTTGGGAACAACTGTCTTTGTTGTTCACTTGTCTGAAGTTATTGCAACTCGTCTCTTCCCATGTGCTGAGAAATTAGGGATGATGGGTGAAGGGTTTGCTTGGATTCTTACTTCCAGAAGCATGAGCAGTTTTCATGATCAGTTCATTGACGATTTAACAAAGGAGGCAATGGAAGGTGTGGTTGGTTTCAAGTCTTATATACCAATGTCAAAAGAGCTTCACAACTTCACTTTGAGATGGAGAAAAACACTCCCTGTTGAAGAAGTTACTGGGAGTGAGATTACTCGGTTGAGTATCTCTGGCGTATGGGCTCATGATGTCGCTTGGAGTCTGGCGAGTGCAGCTGAAGTGACAAGGATGCCAACTGTGACATCAACTCTCCTTGAGGCCATAAAAGAAAGCAGGTTTAAGGGTCTGAGTGGTAACTTTCAGTTGGATGATATGAAGTTGTTATCAGACAAGTTTGAGATTGTGAATATGATAGGATCAGGTGAGAGAAGGGTAGGATTCTGGAATTCTAATGGTAGTTTCAGCAATAGAAGACAATTATCTTCTACTCATGACAATCTGGAGACCATAATTTGGCCCGGTGGGTCTGCTCAAAGTCCGAAAGGGAGAAGTCTAAGAGAGAGCGGTAGAAAAAAGCTTAGGGTTCTTGTTACATCTAGCAATAGATTCCCAAGACTGATGAAAGTGGAGACTGATCCAATAACACATGAGATAACAATTGTCGAAGGGTTCTGTATAGAAGTCTTTCAGGCATCCATTGCACCTTTCAACTATGAAGTGGAGTACATACGTTGGCTCAATGGAACTAACTACACCAAGCTTGCATATGCACTTCATAGCCAGAAAGACAAATATGATGCTGCTGTGGGAGATATTACAATTACTTCCGATAGATCGATGTATGTTGATTTTACGTTGCCATACACTGAAATGGGTCTTGGAATTGTAGCAGCAAAGGAGAGAAGTATGTGGGTGTTCTTCCAACCTCTAACACCAAACCTTTGGATAACAAGTGCAGCTTTCTTTGTCTTGACGGGTATTATAGTTTGGTTGATAGAAAGAGCTGAGAACAAAGAGTTCCAAGGATCTTGGCCTCAACAGATTGGAGTTGTGATTTGGTTTGGCTTCTCTACCCTTGTTTATGCTCATCGGGAGAAGCTACAACACAACTTATCAAGATTTGTAGTTACAGTTTGGGTATTTGCGGTGCTCATATTGGTTACAAGTTACACTGCAACATTGACATCAATGATGACGGTGCAACAAATACGATTCAACGCCAATGAAGATTATGTGGGTCACCTCTCGGGATCCCTCATCGCAAATGCGGCCCTCACCAATTCCAGCCTCAGAGCAATGAGATTATTGGGTCTCAATACTTCAGAAGATTATGCTCAAGCTTTGATGAATAAAAGTGTCTCATATATTGTTAGTGAGTTGCCATACCTGAAAATCCTCCTTGGCGAGAATCCTGGACATTTTCTCATGGTCAAGACACAATCTACCACCAATGGTTTTGGCTTCGTATGTATCCTTCTTCTGCATCATCAGTTGCTTTACTCTTGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0001101 GO:0003674 GO:0004888 GO:0005215 GO:0005216 GO:0005261 GO:0005262 GO:0005267 GO:0005272 GO:0005575 GO:0005623 GO:0005886 GO:0006810 GO:0006811 GO:0006812 GO:0006813 GO:0006814 GO:0006816 GO:0006873 GO:0007154 GO:0007165 GO:0008066 GO:0008150 GO:0008324 GO:0009719 GO:0009725 GO:0009737 GO:0009987 GO:0010033 GO:0010243 GO:0015075 GO:0015077 GO:0015079 GO:0015081 GO:0015085 GO:0015267 GO:0015318 GO:0015672 GO:0016020 GO:0019722 GO:0019725 GO:0019932 GO:0022803 GO:0022838 GO:0022857 GO:0022890 GO:0023052 GO:0030001 GO:0030003 GO:0033993 GO:0034220 GO:0035556 GO:0035725 GO:0038023 GO:0042221 GO:0042592 GO:0043200 GO:0044464 GO:0046873 GO:0048878 GO:0050789 GO:0050794 GO:0050801 GO:0050896 GO:0051179 GO:0051234 GO:0051716 GO:0055080 GO:0055082 GO:0055085 GO:0060089 GO:0065007 GO:0065008 GO:0070588 GO:0070838 GO:0070887 GO:0071229 GO:0071230 GO:0071310 GO:0071417 GO:0071495 GO:0071804 GO:0071805 GO:0071944 GO:0072511 GO:0097305 GO:0098655 GO:0098660 GO:0098662 GO:1901698 GO:1901699 GO:1901700 GO:1901701

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

ANF_receptor Lig_chan SBP_bac_3

Protein Analysis

750

Amino Acids

84.29

Weight (kDa)

6.17

Isoelectric Point (pI)

33.97

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
Peripla_BP_6	PF13458	40 - 370	5.1e-11	Periplasmic binding protein
ANF_receptor	PF01094	57 - 389	1.2e-73	Receptor family ligand binding region
Lig_chan-Glu_bd	PF10613	446 - 549	3.7e-08	Ligated ion channel L-glutamate- and glycine-binding site
SBP_bac_3	PF00497	470 - 609	9.4e-07	Bacterial extracellular solute-binding proteins, family 3
Lig_chan	PF00060	562 - 653	1.9e-23	Ligand-gated ion channel

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

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Align Labels (Cladogram)

Image

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Orthologous Genes (Group: OG0000294)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT3G07520 AT5G48400 AT5G48400 AT5G48410 AT5G48410 AT5G48410 AT5G48410
fragaria_vesca	FvH4_1g26430 FvH4_7g07770 FvH4_7g07820 FvH4_7g07830 FvH4_7g07830
malus_domestica	MD02G1232900.v1.1 MD02G1233100.v1.1 MD07G1080800.v1.1
prunus_persica	Prupe.2G105100_v2.0.a1 Prupe.2G105200_v2.0.a1 Prupe.2G105300_v2.0.a1 Prupe.2G105400_v2.0.a1 Prupe.2G105500_v2.0.a1 Prupe.2G105600_v2.0.a1 Prupe.2G105700_v2.0.a1 Prupe.2G105700_v2.0.a1 Prupe.2G105700_v2.0.a1 Prupe.2G105800_v2.0.a1
pyrus_communis	pycom02g20100 pycom07g06420
rosa_chinensis	RchiOBHm_Chr1g0341721 RchiOBHm_Chr1g0341731 RchiOBHm_Chr1g0341751 RchiOBHm_Chr1g0341761 RchiOBHm_Chr1g0341831 RchiOBHm_Chr1g0341851 RchiOBHm_Chr1g0341911 RchiOBHm_Chr1g0342001 RchiOBHm_Chr1g0342301 RchiOBHm_Chr5g0063031 RchiOBHm_Chr5g0063061
rosa_laevigata	RLG00000029107 RLG00000029109 RLG00000029110 RLG00000029111 RLG00000029123 RLG00000029125 RLG00000029131 RLG00000029136 RLG00000029150 RLG00000029650 RLG00000029651 RLG00000035598
rosa_multiflora	Rmu_sc0000696.1_g000008 Rmu_sc0001055.1_g000009 Rmu_sc0001055.1_g000014 Rmu_sc0001547.1_g000003 Rmu_sc0002161.1_g000003 Rmu_sc0002302.1_g000023 Rmu_sc0002322.1_g000082 Rmu_sc0004658.1_g000002 Rmu_sc0005331.1_g000003 Rmu_sc0007655.1_g000001 Rmu_sc0007655.1_g000003 Rmu_sc0018911.1_g000004 Rmu_sc0018911.1_g000011 Rmu_sc0034500.1_g000001
rosa_roxburghii	Rroxscaffold_4G00312490 Rroxscaffold_4G00312540 Rroxscaffold_4G00312660 Rroxscaffold_4G00312720 Rroxscaffold_4G00312820 Rroxscaffold_4G00312930
rosa_rugosa	Rorug01G0151800.1 Rorug01G0151900.1 Rorug01G0152000.1 Rorug01G0154000.1 Rorug01G0154100.1 Rorug05G0353600 Rorug05G0353700 Rorug05G0353800
rosa_samantha	Rh1AG166600 Rh1AG168100 Rh1AG169100 Rh1AG169200 Rh1AG169600 Rh1AG169800 Rh1BG132800 Rh1BG132900 Rh1BG133600 Rh1BG133700 Rh1BG134800 Rh1BG135300 Rh1BG135500 Rh1BG135900 Rh1BG136000 Rh1BG136100 Rh1BG136400 Rh1BG137300 Rh1BG137600 Rh1BG137800 Rh1CG155000 Rh1CG155600 Rh1CG156900 Rh1CG157500 Rh1CG157800 Rh1CG158100 Rh1DG167700 Rh1DG168200 Rh1DG168900 Rh1DG169000 Rh1DG169500 Rh5AG414400 Rh5BG429200 Rh5CG452600 Rh5DG379600 Rh5DG442600 Rh5DG442700
rosa_wichuraiana	Rw0G014260 Rw0G017550 Rw1G013900 Rw1G014090 Rw1G014110 Rw1G014130 Rw1G014150 Rw5G038950

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
Acc36I	ACCTGC	1 cut(s)	1071
AccB7I	CCANNNNNTGG	1 cut(s)	1260
AccBSI	CCGCTC	1 cut(s)	1311
AciI	CCGC	6 cut(s)	169, 330, 362, 1311, 1892, 2015
AclI	AACGTT	1 cut(s)	597
AclWI	GGATC	7 cut(s)	439, 663, 1171, 1376, 1780, 1992, 2005
AcsI	RAATTY	2 cut(s)	9, 1192
AcuI	CTGAAG	3 cut(s)	732, 1044, 2052
AfaI	GTAC	2 cut(s)	606, 1472
AfiI	CCNNNNNNNGG	2 cut(s)	156, 1260
AflII	CTTAAG	1 cut(s)	671
AgsI	TTSAA	5 cut(s)	20, 868, 938, 1456, 1963
AjnI	CCWGG	1 cut(s)	2158
AjuI	GAANNNNNNNTTGG	4 cut(s)	843, 875, 1608, 1640
Alw21I	GWGCWC	1 cut(s)	1899
Alw26I	GTCTC	5 cut(s)	734, 1244, 1370, 2063, 2110
AlwI	GGATC	7 cut(s)	439, 663, 1171, 1376, 1780, 1992, 2005
Ama87I	CYCGRG	1 cut(s)	1993
AoxI	GGCC	4 cut(s)	1065, 1262, 1778, 2016
ApeKI	GCWGC	5 cut(s)	298, 1019, 1547, 1637, 1703
ApoI	RAATTY	2 cut(s)	9, 1192
Asp700I	GAANNNNTTC	1 cut(s)	1431
AspS9I	GGNCC	4 cut(s)	118, 577, 1263, 2017
AsuC2I	CCSGG	2 cut(s)	122, 1266
AsuHPI	GGTGA	5 cut(s)	16, 776, 1181, 1979, 2014
AvaI	CYCGRG	1 cut(s)	1993
AvaII	GGWCC	2 cut(s)	118, 577
BamHI	GGATCC	1 cut(s)	1997
BanII	GRGCYC	1 cut(s)	991
BarI	GAAGNNNNNNTAC	2 cut(s)	2205, 2237
BbsI	GAAGAC	1 cut(s)	1225
Bbv12I	GWGCWC	1 cut(s)	1899
BbvI	GCAGC	5 cut(s)	285, 1031, 1534, 1649, 1715
BccI	CCATC	3 cut(s)	646, 754, 909
BciT130I	CCWGG	1 cut(s)	2160
BciVI	GTATCC	1 cut(s)	2228
BclI	TGATCA	1 cut(s)	814
BcnI	CCSGG	2 cut(s)	122, 1266
BcoDI	GTCTC	5 cut(s)	734, 1244, 1370, 2063, 2110
BfaI	CTAG	3 cut(s)	344, 381, 1344
BfrI	CTTAAG	1 cut(s)	671
BfuAI	ACCTGC	1 cut(s)	1071
BfuI	GTATCC	1 cut(s)	2228
BisI	GCNGC	6 cut(s)	299, 1020, 1548, 1638, 1704, 2016
BlsI	GCNGC	6 cut(s)	300, 1021, 1549, 1639, 1705, 2017
Bme1390I	CCNGG	3 cut(s)	122, 1266, 2160
Bme18I	GGWCC	2 cut(s)	118, 577
BmeT110I	CYCGRG	1 cut(s)	1993
BmgT120I	GGNCC	4 cut(s)	118, 577, 1263, 2017
BmiI	GGNNCC	4 cut(s)	119, 148, 387, 1999
BmrFI	CCNGG	3 cut(s)	122, 1266, 2160
BmrI	ACTGGG	1 cut(s)	957
BmsI	GCATC	4 cut(s)	1026, 1448, 1534, 2239
BmuI	ACTGGG	1 cut(s)	957
BpiI	GAAGAC	1 cut(s)	1225
BpmI	CTGGAG	2 cut(s)	571, 1268
Bpu10I	CCTNAGC	1 cut(s)	1325
BpuEI	CTTGAG	2 cut(s)	1082, 2067
BpuMI	CCSGG	2 cut(s)	122, 1266
Bsa29I	ATCGAT	2 cut(s)	658, 1583
BsaI	GGTCTC	2 cut(s)	1244, 2063
BsaJI	CCNNGG	6 cut(s)	150, 183, 499, 612, 1768, 2146
BsaXI	ACNNNNNCTCC	2 cut(s)	544, 574
Bsc4I	CCNNNNNNNGG	2 cut(s)	156, 1260
Bse1I	ACTGG	2 cut(s)	554, 952
Bse3DI	GCAATG	3 cut(s)	852, 1443, 2049
BseBI	CCWGG	1 cut(s)	2160
BseCI	ATCGAT	2 cut(s)	658, 1583
BseDI	CCNNGG	6 cut(s)	150, 183, 499, 612, 1768, 2146
BseGI	GGATG	4 cut(s)	762, 1041, 1120, 1439
BseLI	CCNNNNNNNGG	2 cut(s)	156, 1260
BseMI	GCAATG	3 cut(s)	852, 1443, 2049
BseMII	CTCAG	5 cut(s)	462, 735, 1085, 1743, 2050
BseNI	ACTGG	2 cut(s)	554, 952
BseXI	GCAGC	5 cut(s)	285, 1031, 1534, 1649, 1715
BsgI	GTGCAG	2 cut(s)	1038, 1722
BshFI	GGCC	4 cut(s)	1067, 1264, 1780, 2018
BshVI	ATCGAT	2 cut(s)	658, 1583
BsiHKAI	GWGCWC	1 cut(s)	1899
BsiHKCI	CYCGRG	1 cut(s)	1993
BsiSI	CCGG	2 cut(s)	121, 1266
BslI	CCNNNNNNNGG	2 cut(s)	156, 1260
BsmAI	GTCTC	5 cut(s)	734, 1244, 1370, 2063, 2110
BsmBI	CGTCTC	1 cut(s)	734
BsnI	GGCC	4 cut(s)	1067, 1264, 1780, 2018
Bso31I	GGTCTC	2 cut(s)	1244, 2063
BsoBI	CYCGRG	1 cut(s)	1993
Bsp1286I	GDGCHC	2 cut(s)	991, 1899
Bsp1407I	TGTACA	1 cut(s)	604
Bsp143I	GATC	9 cut(s)	444, 538, 655, 814, 1163, 1381, 1580, 1772, 1997
Bsp19I	CCATGG	2 cut(s)	183, 499
BspACI	CCGC	6 cut(s)	169, 330, 362, 1311, 1892, 2015
BspANI	GGCC	4 cut(s)	1067, 1264, 1780, 2018
BspCNI	CTCAG	5 cut(s)	463, 736, 1086, 1744, 2049
BspDI	ATCGAT	2 cut(s)	658, 1583
BspHI	TCATGA	3 cut(s)	811, 991, 1237
BspLI	GGNNCC	4 cut(s)	119, 148, 387, 1999
BspMI	ACCTGC	1 cut(s)	1071
BspPI	GGATC	7 cut(s)	439, 663, 1171, 1376, 1780, 1992, 2005
BspTI	CTTAAG	1 cut(s)	671
BspTNI	GGTCTC	2 cut(s)	1244, 2063
BsrBI	CCGCTC	1 cut(s)	1311
BsrDI	GCAATG	3 cut(s)	852, 1443, 2049
BsrGI	TGTACA	1 cut(s)	604
BsrI	ACTGG	2 cut(s)	554, 952
BssECI	CCNNGG	6 cut(s)	150, 183, 499, 612, 1768, 2146
BssMI	GATC	9 cut(s)	444, 538, 655, 814, 1163, 1381, 1580, 1772, 1997
BssT1I	CCWWGG	5 cut(s)	183, 499, 612, 1768, 2146
Bst2UI	CCWGG	1 cut(s)	2160
Bst4CI	ACNGT	7 cut(s)	74, 518, 609, 691, 1045, 1879, 1945
Bst6I	CTCTTC	2 cut(s)	273, 737
BstAFI	CTTAAG	1 cut(s)	671
BstAPI	GCANNNNNTGC	1 cut(s)	1445
BstAUI	TGTACA	1 cut(s)	604
BstC8I	GCNNGC	2 cut(s)	318, 1509
BstDEI	CTNAG	7 cut(s)	471, 744, 1094, 1301, 1325, 1752, 2036
BstDSI	CCRYGG	3 cut(s)	150, 183, 499
BstEII	GGTNACC	1 cut(s)	1985
BstF5I	GGATG	4 cut(s)	762, 1041, 1120, 1439
BstKTI	GATC	9 cut(s)	447, 541, 658, 817, 1166, 1384, 1583, 1775, 2000
BstMAI	GTCTC	5 cut(s)	734, 1244, 1370, 2063, 2110
BstMBI	GATC	9 cut(s)	444, 538, 655, 814, 1163, 1381, 1580, 1772, 1997
BstMWI	GCNNNNNNNGC	3 cut(s)	1019, 1445, 2015
BstNI	CCWGG	1 cut(s)	2160
BstPI	GGTNACC	1 cut(s)	1985
BstSCI	CCNGG	3 cut(s)	120, 1264, 2158
BstV1I	GCAGC	5 cut(s)	285, 1031, 1534, 1649, 1715
BstV2I	GAAGAC	1 cut(s)	1225
BstX2I	RGATCY	2 cut(s)	1772, 1997
BstXI	CCANNNNNNTGG	1 cut(s)	1689
BstYI	RGATCY	2 cut(s)	1772, 1997
Bsu15I	ATCGAT	2 cut(s)	658, 1583
BsuI	GTATCC	1 cut(s)	2228
BsuRI	GGCC	4 cut(s)	1067, 1264, 1780, 2018
BsuTUI	ATCGAT	2 cut(s)	658, 1583
BtgI	CCRYGG	3 cut(s)	150, 183, 499
BtgZI	GCGATG	1 cut(s)	1990
BtsCI	GGATG	4 cut(s)	762, 1041, 1120, 1439
BtsI	GCAGTG	1 cut(s)	1917
BtsIMutI	CAGTG	3 cut(s)	523, 1611, 1917
BveI	ACCTGC	1 cut(s)	1071
Cac8I	GCNNGC	2 cut(s)	318, 1509
CciI	TCATGA	3 cut(s)	811, 991, 1237
Cfr13I	GGNCC	4 cut(s)	118, 577, 1263, 2017
ClaI	ATCGAT	2 cut(s)	658, 1583
Csp6I	GTAC	2 cut(s)	605, 1471
CviQI	GTAC	2 cut(s)	605, 1471
DdeI	CTNAG	7 cut(s)	471, 744, 1094, 1301, 1325, 1752, 2036
DpnI	GATC	9 cut(s)	446, 540, 657, 816, 1165, 1383, 1582, 1774, 1999
DpnII	GATC	9 cut(s)	444, 538, 655, 814, 1163, 1381, 1580, 1772, 1997
Eam1104I	CTCTTC	2 cut(s)	273, 737
EarI	CTCTTC	2 cut(s)	273, 737
EciI	GGCGGA	1 cut(s)	377
Eco130I	CCWWGG	5 cut(s)	183, 499, 612, 1768, 2146
Eco24I	GRGCYC	1 cut(s)	991
Eco31I	GGTCTC	2 cut(s)	1244, 2063
Eco47I	GGWCC	2 cut(s)	118, 577
Eco57I	CTGAAG	3 cut(s)	732, 1044, 2052
Eco88I	CYCGRG	1 cut(s)	1993
Eco91I	GGTNACC	1 cut(s)	1985
EcoO65I	GGTNACC	1 cut(s)	1985
EcoRI	GAATTC	1 cut(s)	1192
EcoRII	CCWGG	1 cut(s)	2158
EcoT14I	CCWWGG	5 cut(s)	183, 499, 612, 1768, 2146
EcoT22I	ATGCAT	1 cut(s)	567
EcoT38I	GRGCYC	1 cut(s)	991
ErhI	CCWWGG	5 cut(s)	183, 499, 612, 1768, 2146
Esp3I	CGTCTC	1 cut(s)	734
FalI	AAGNNNNNCTT	4 cut(s)	339, 371, 1690, 1722
FauI	CCCGC	1 cut(s)	323
FauNDI	CATATG	1 cut(s)	1513
FbaI	TGATCA	1 cut(s)	814
Fnu4HI	GCNGC	6 cut(s)	299, 1020, 1548, 1638, 1704, 2016
FokI	GGATG	4 cut(s)	769, 1048, 1127, 1426
FriOI	GRGCYC	1 cut(s)	991
Fsp4HI	GCNGC	6 cut(s)	299, 1020, 1548, 1638, 1704, 2016
FspBI	CTAG	3 cut(s)	344, 381, 1344
GluI	GCNGC	6 cut(s)	299, 1020, 1548, 1638, 1704, 2016
GsuI	CTGGAG	2 cut(s)	571, 1268
HaeIII	GGCC	4 cut(s)	1067, 1264, 1780, 2018
HapII	CCGG	2 cut(s)	121, 1266
HindIII	AAGCTT	4 cut(s)	353, 1322, 1505, 2085
HpaII	CCGG	2 cut(s)	121, 1266
HphI	GGTGA	5 cut(s)	16, 776, 1181, 1979, 2014
Hpy166II	GTNNAC	2 cut(s)	577, 703
Hpy8I	GTNNAC	2 cut(s)	577, 703
HpyAV	CCTTC	7 cut(s)	149, 302, 761, 845, 1170, 1406, 2231
HpyCH4III	ACNGT	7 cut(s)	74, 518, 609, 691, 1045, 1879, 1945
HpyCH4IV	ACGT	3 cut(s)	597, 1477, 1601
HpyF10VI	GCNNNNNNNGC	3 cut(s)	1019, 1445, 2015
HpyF3I	CTNAG	7 cut(s)	471, 744, 1094, 1301, 1325, 1752, 2036
HpySE526I	ACGT	3 cut(s)	597, 1477, 1601
Ksp22I	TGATCA	1 cut(s)	814
Kzo9I	GATC	9 cut(s)	444, 538, 655, 814, 1163, 1381, 1580, 1772, 1997
LmnI	GCTCC	1 cut(s)	667
Lsp1109I	GCAGC	5 cut(s)	285, 1031, 1534, 1649, 1715
LweI	GCATC	4 cut(s)	1026, 1448, 1534, 2239
MaeI	CTAG	3 cut(s)	344, 381, 1344
MaeII	ACGT	3 cut(s)	597, 1477, 1601
MalI	GATC	9 cut(s)	446, 540, 657, 816, 1165, 1383, 1582, 1774, 1999
MbiI	CCGCTC	1 cut(s)	1311
MboI	GATC	9 cut(s)	444, 538, 655, 814, 1163, 1381, 1580, 1772, 1997
MfeI	CAATTG	1 cut(s)	1404
MflI	RGATCY	2 cut(s)	1772, 1997
MhlI	GDGCHC	2 cut(s)	991, 1899
MlyI	GAGTC	3 cut(s)	94, 225, 1015
MmeI	TCCRAC	3 cut(s)	93, 1092, 1693
Mph1103I	ATGCAT	1 cut(s)	567
MroXI	GAANNNNTTC	1 cut(s)	1431
MseI	TTAA	5 cut(s)	402, 477, 672, 833, 1086
MslI	CAYNNNNRTG	2 cut(s)	585, 1616
MspA1I	CMGCKG	1 cut(s)	1022
MspCI	CTTAAG	1 cut(s)	671
MspI	CCGG	2 cut(s)	121, 1266
MspR9I	CCNGG	3 cut(s)	122, 1266, 2160
MunI	CAATTG	1 cut(s)	1404
MvaI	CCWGG	1 cut(s)	2160
MwoI	GCNNNNNNNGC	3 cut(s)	1019, 1445, 2015
NciI	CCSGG	2 cut(s)	122, 1266
NcoI	CCATGG	2 cut(s)	183, 499
NdeI	CATATG	1 cut(s)	1513
NdeII	GATC	9 cut(s)	444, 538, 655, 814, 1163, 1381, 1580, 1772, 1997
NlaIV	GGNNCC	4 cut(s)	119, 148, 387, 1999
NmuCI	GTSAC	4 cut(s)	628, 1027, 1045, 1985
NsiI	ATGCAT	1 cut(s)	567
PagI	TCATGA	3 cut(s)	811, 991, 1237
PdmI	GAANNNNTTC	1 cut(s)	1431
PfeI	GAWTC	9 cut(s)	112, 251, 281, 644, 781, 1185, 1353, 1959, 2155
PflMI	CCANNNNNTGG	1 cut(s)	1260
PfoI	TCCNGGA	1 cut(s)	2158
PkrI	GCNGC	6 cut(s)	300, 1021, 1549, 1639, 1705, 2017
PleI	GAGTC	3 cut(s)	93, 225, 1014
PpsI	GAGTC	3 cut(s)	93, 225, 1014
Psp1406I	AACGTT	1 cut(s)	597
Psp6I	CCWGG	1 cut(s)	2158
PspEI	GGTNACC	1 cut(s)	1985
PspGI	CCWGG	1 cut(s)	2158
PspN4I	GGNNCC	4 cut(s)	119, 148, 387, 1999
PspPI	GGNCC	4 cut(s)	118, 577, 1263, 2017
PsuI	RGATCY	2 cut(s)	1772, 1997
PvuII	CAGCTG	1 cut(s)	1022
RsaI	GTAC	2 cut(s)	606, 1472
RsaNI	GTAC	2 cut(s)	605, 1471
RseI	CAYNNNNRTG	2 cut(s)	585, 1616
SaqAI	TTAA	5 cut(s)	402, 477, 672, 833, 1086
SatI	GCNGC	6 cut(s)	299, 1020, 1548, 1638, 1704, 2016
Sau3AI	GATC	9 cut(s)	444, 538, 655, 814, 1163, 1381, 1580, 1772, 1997
Sau96I	GGNCC	4 cut(s)	118, 577, 1263, 2017
SchI	GAGTC	3 cut(s)	94, 225, 1015
ScrFI	CCNGG	3 cut(s)	122, 1266, 2160
SduI	GDGCHC	2 cut(s)	991, 1899
SfaNI	GCATC	4 cut(s)	1026, 1448, 1534, 2239
SinI	GGWCC	2 cut(s)	118, 577
SmiMI	CAYNNNNRTG	2 cut(s)	585, 1616
SmlI	CTYRAG	3 cut(s)	671, 1061, 2082
SmoI	CTYRAG	3 cut(s)	671, 1061, 2082
SsiI	CCGC	6 cut(s)	169, 330, 362, 1311, 1892, 2015
SspMI	CTAG	3 cut(s)	344, 381, 1344
StyD4I	CCNGG	3 cut(s)	120, 1264, 2158
StyI	CCWWGG	5 cut(s)	183, 499, 612, 1768, 2146
TaaI	ACNGT	7 cut(s)	74, 518, 609, 691, 1045, 1879, 1945
TaiI	ACGT	3 cut(s)	600, 1480, 1604
TaqI	TCGA	5 cut(s)	83, 635, 658, 1410, 1583
TatI	WGTACW	2 cut(s)	604, 1470
TauI	GCSGC	1 cut(s)	2018
TfiI	GAWTC	9 cut(s)	112, 251, 281, 644, 781, 1185, 1353, 1959, 2155
Tru1I	TTAA	5 cut(s)	402, 477, 672, 833, 1086
Tru9I	TTAA	5 cut(s)	402, 477, 672, 833, 1086
TscAI	CASTG	3 cut(s)	523, 1618, 1924
TseFI	GTSAC	4 cut(s)	628, 1027, 1045, 1985
TseI	GCWGC	5 cut(s)	298, 1019, 1547, 1637, 1703
Tsp45I	GTSAC	4 cut(s)	628, 1027, 1045, 1985
TspGWI	ACGGA	2 cut(s)	124, 139
TspRI	CASTG	3 cut(s)	523, 1618, 1924
Van91I	CCANNNNNTGG	1 cut(s)	1260
Vha464I	CTTAAG	1 cut(s)	671
VpaK11BI	GGWCC	2 cut(s)	118, 577
XapI	RAATTY	2 cut(s)	9, 1192
XmnI	GAANNNNTTC	1 cut(s)	1431
XspI	CTAG	3 cut(s)	344, 381, 1344
Zsp2I	ATGCAT	1 cut(s)	567

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.